Chy5G102090 (gene) Cucumber (hystrix) v1

Overview
NameChy5G102090
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationchrH05: 16131222 .. 16132253 (-)
RNA-Seq ExpressionChy5G102090
SyntenyChy5G102090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTCAATTTTCATCACTTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCGTCACAAACCCTTCAAGACAGCATTAAAGCTGCTGTTGAATCAAAGTCGTATAAGAAACTTCCTGATCTGTTTCCTTCATTGCAAGAAGCTTGCCACAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGACCTCGCTCCAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAAAGTCCTTCACCCTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGGTTGTGTCCCTTCCCCTCAGACCCATTTTCTACTTTCTTCTGCCTGGCTAAAACAACGTAGCCACGCTAAGTCTGTTGCTAATATGTTGATGGATATGCAGTCAATTGGTTACAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTATGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTATTCCTGACTTGGAAAGTTATGGCACCTTAATTCATGCAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTAAAAGTTAAATTGATGCCAAGACAGGGAACAATTATTAACGTTCTGGCTGCGTTACGAGCAAACCGAGAGGTAAGGAGAACAGTTGAGATCATTGAGCTGTTGGAGAGGAACAATCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCAGGAAAGGTGACCATGGGGATGACAGACAGAGGGTTTATACCATATATCAAGGTCAGGCAAAAGGTTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTTGCTTCTGCTGTAAGACGCAGATTTGTAGAGTTGGGGTCTTAG

mRNA sequence

ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTCAATTTTCATCACTTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCGTCACAAACCCTTCAAGACAGCATTAAAGCTGCTGTTGAATCAAAGTCGTATAAGAAACTTCCTGATCTGTTTCCTTCATTGCAAGAAGCTTGCCACAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGACCTCGCTCCAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAAAGTCCTTCACCCTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGGTTGTGTCCCTTCCCCTCAGACCCATTTTCTACTTTCTTCTGCCTGGCTAAAACAACGTAGCCACGCTAAGTCTGTTGCTAATATGTTGATGGATATGCAGTCAATTGGTTACAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTATGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTATTCCTGACTTGGAAAGTTATGGCACCTTAATTCATGCAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTAAAAGTTAAATTGATGCCAAGACAGGGAACAATTATTAACGTTCTGGCTGCGTTACGAGCAAACCGAGAGGTAAGGAGAACAGTTGAGATCATTGAGCTGTTGGAGAGGAACAATCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCAGGAAAGGTGACCATGGGGATGACAGACAGAGGGTTTATACCATATATCAAGGTCAGGCAAAAGGTTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTTGCTTCTGCTGTAAGACGCAGATTTGTAGAGTTGGGGTCTTAG

Coding sequence (CDS)

ATGAATATTGGAAGAACAAAGACTTCTGCTTTTTTACTCAATTTTCATCACTTTTTGGGGCAATATTCTTCTATCCACTCAATATCACCGTCACAAACCCTTCAAGACAGCATTAAAGCTGCTGTTGAATCAAAGTCGTATAAGAAACTTCCTGATCTGTTTCCTTCATTGCAAGAAGCTTGCCACAACCCCAATCTTTTCTTGTTTCTCTCCACTTTTCCTCTTAATTTAAGAACACAAGTTGTGGATGAGATATTACAATCTTTAATATCTATTAGACCTCGCTCCAAATCCCAATTTGTCCATGGCTCTCTGCTTTTCTACACTCTTCAAAGTCCTTCACCCTTTCCCCTCTCTCTTCCAGTCCTCCAGAGGATTCTCCACTCTGGTTGTGTCCCTTCCCCTCAGACCCATTTTCTACTTTCTTCTGCCTGGCTAAAACAACGTAGCCACGCTAAGTCTGTTGCTAATATGTTGATGGATATGCAGTCAATTGGTTACAAGCCTGACAGCAACATATGTAACTATCTTATATCCTCTCTATGTTCCATTGGTGAATTAGCTGAGGCCTTTCAAGTTTTGAAAGGTATGGGAGGGGCAGGGTGTATTCCTGACTTGGAAAGTTATGGCACCTTAATTCATGCAGCAACAGCTGTTAGACGGACGGACAAGGCAGTGGAATTGCTAAAAGAAATGGTTGTAAAAGTTAAATTGATGCCAAGACAGGGAACAATTATTAACGTTCTGGCTGCGTTACGAGCAAACCGAGAGGTAAGGAGAACAGTTGAGATCATTGAGCTGTTGGAGAGGAACAATCACGATGTTGGATTTGAGAGCTATGAGCTTCTTGTTGAAGGTTGTCTAGAGTGTCGTGAGTATATTTTAGCAGGAAAGGTGACCATGGGGATGACAGACAGAGGGTTTATACCATATATCAAGGTCAGGCAAAAGGTTGTTGAGGGGCTGGCTGGCATTGGGGAAGTGGAACTTGCTTCTGCTGTAAGACGCAGATTTGTAGAGTTGGGGTCTTAG

Protein sequence

MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELGS*
Homology
[Close]
BLAST of Chy5G102090 vs. ExPASy Swiss-Prot
Match: Q9LNC0 (Pentatricopeptide repeat-containing protein At1g06270 OS=Arabidopsis thaliana OX=3702 GN=At1g06270 PE=2 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 7.6e-93
Identity = 174/317 (54.89%), Postives = 232/317 (73.19%), Query Frame = 0 

Query: 27  SISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEIL 86
           SIS  + ++ +IK AVE+K Y ++P+L  SL+E   N  LF FLS F  + R +V+DEIL
Sbjct: 27  SISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSTLFSFLSAFQRHHRIRVIDEIL 86

Query: 87  QSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWL 146
           QS + +RPRS  + V+ SLL Y LQS  P PLS  +LQR L SGC+P+PQTH LLS AWL
Sbjct: 87  QSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLSDAWL 146

Query: 147 KQRSHAKSVANMLMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDL 206
           ++R  ++SVA+++ +M+ IGY PD+  CNYL+SSLC++ +L EA +V++ M  AGCIPD+
Sbjct: 147 ERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDV 206

Query: 207 ESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTIINVLAALRANREVRRTVEIIE 266
           ESYG +I++    R+T   V+++KEMV K  + PR+G +  V AALRANRE+ + +E+IE
Sbjct: 207 ESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIE 266

Query: 267 LLERNNHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQKVVEGLAGIG 326
            +E  ++ V FESYE++VEGCLE REYILAGKV M MTDRGFIPYIKVRQKVVE L  IG
Sbjct: 267 FVESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINIG 326

Query: 327 EVELASAVRRRFVELGS 344
           E +LA  VR+R  EL S
Sbjct: 327 EWKLACTVRQRVSELRS 343

[Close]
BLAST of Chy5G102090 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.4e-15
Identity = 60/212 (28.30%), Postives = 96/212 (45.28%), Query Frame = 0 

Query: 131 CVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISSLCSIGELAEA 190
           C+P   T+  L     K+    ++V  +L +MQS G  P   I N LI  LC  G+L   
Sbjct: 218 CLPDGYTYCTLMDGLCKEERIDEAVL-LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV 277

Query: 191 FQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTIINVLA 250
            +++  M   GC+P+  +Y TLIH      + DKAV LL+ M V  K +P   T   ++ 
Sbjct: 278 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM-VSSKCIPNDVTYGTLIN 337

Query: 251 ALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIP 310
            L   R     V ++  +E   + +    Y +L+ G  +  +   A  +   M ++G  P
Sbjct: 338 GLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP 397

Query: 311 YIKVRQKVVEGLAGIGEVELASAVRRRFVELG 343
            I V   +V+GL   G+   A  +  R +  G
Sbjct: 398 NIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427

[Close]
BLAST of Chy5G102090 vs. ExPASy Swiss-Prot
Match: Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-12
Identity = 58/224 (25.89%), Postives = 106/224 (47.32%), Query Frame = 0 

Query: 119 SLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLI 178
           ++ V +R++  G  PS QT+  L    L +R    SV  +L +M+++G KP+       I
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSL-MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 266

Query: 179 SSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKL 238
             L   G++ EA+++LK M   GC PD+ +Y  LI A    R+ D A E+ ++M    + 
Sbjct: 267 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG-RH 326

Query: 239 MPRQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGK 298
            P + T I +L     NR++    +    +E++ H     ++ +LV+   +   +  A  
Sbjct: 327 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 386

Query: 299 VTMGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELG 343
               M D+G +P +     ++ GL  +  ++ A  +      LG
Sbjct: 387 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428

[Close]
BLAST of Chy5G102090 vs. ExPASy Swiss-Prot
Match: Q3ECK2 (Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62680 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 8.9e-09
Identity = 51/175 (29.14%), Postives = 81/175 (46.29%), Query Frame = 0 

Query: 118 LSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYL 177
           L+L +L ++L  G  P   T   L + + + R+      +++  M  IGYKPD    N +
Sbjct: 138 LALSILGKMLKLGYEPDRVTIGSLVNGFCR-RNRVSDAVSLVDKMVEIGYKPDIVAYNAI 197

Query: 178 ISSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVK 237
           I SLC    + +AF   K +   G  P++ +Y  L++      R   A  LL +M +K K
Sbjct: 198 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKK 257

Query: 238 LMPRQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEG-CLECR 292
           + P   T   +L A   N +V    E+ E + R + D    +Y  L+ G CL  R
Sbjct: 258 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310

[Close]
BLAST of Chy5G102090 vs. ExPASy Swiss-Prot
Match: A3KPF8 (Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g79080 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.6e-08
Identity = 38/139 (27.34%), Postives = 70/139 (50.36%), Query Frame = 0 

Query: 97  KSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVA 156
           K    H + L Y L   +    ++ V++ ++ SG +P    +  L +  L +R +     
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQ-LCKRGNVGYAM 162

Query: 157 NMLMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAA 216
            ++  M+  GY  ++   N L+  LC +G L ++ Q ++ +   G  P+  +Y  L+ AA
Sbjct: 163 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA 222

Query: 217 TAVRRTDKAVELLKEMVVK 236
              R TD+AV+LL E++VK
Sbjct: 223 YKERGTDEAVKLLDEIIVK 240

[Close]
BLAST of Chy5G102090 vs. ExPASy TrEMBL
Match: A0A0A0LFL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013260 PE=4 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 7.4e-184
Identity = 334/343 (97.38%), Postives = 339/343 (98.83%), Query Frame = 0 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRS AKSVAN+LMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGTI NV+AALR NREVRR VEIIELLER++HDVGFESYELLVEGCLECREYILAGKVT
Sbjct: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300

Query: 301 MGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELGS 344
           MGMTDRGFIPYIKVRQ+VVEGLAGIGEVELASAVRRRFVELGS
Sbjct: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 343

[Close]
BLAST of Chy5G102090 vs. ExPASy TrEMBL
Match: A0A1S3C1B6 (pentatricopeptide repeat-containing protein At1g06270 OS=Cucumis melo OX=3656 GN=LOC103495705 PE=3 SV=1)

HSP 1 Score: 634.4 bits (1635), Expect = 2.7e-178
Identity = 326/343 (95.04%), Postives = 333/343 (97.08%), Query Frame = 0 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFL Q SSIHSISPSQTLQDSIKAAVESKSYKKLP LFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLI +RPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVAN+LMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGC+PDLESYGTLI AATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVT 300
           RQ TIINV+AALRANREVRR VEIIELLER++HDVGFESYELLVEGCLECREYILAGKV 
Sbjct: 241 RQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI 300

Query: 301 MGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELGS 344
           M MTDRGFIPYIKVRQKVVEGL GIGE+ELASAVRRRFVELGS
Sbjct: 301 MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS 343

[Close]
BLAST of Chy5G102090 vs. ExPASy TrEMBL
Match: A0A5D3D4C7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001070 PE=3 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 2.3e-177
Identity = 325/343 (94.75%), Postives = 332/343 (96.79%), Query Frame = 0 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFL Q SSIHSISPSQTLQDSIKAAVESKSYKKLP LFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLI +RPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRS AKSVAN+LMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGC+PDLESYGTLI AATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVT 300
           RQ TIINV+AALRANREVRR VEIIELLER++HDVGFESYELLVEGCLECREYILAGKV 
Sbjct: 241 RQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI 300

Query: 301 MGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELGS 344
           M MTDRGFIPYIKVRQKVVEGL GIGE+ELASAVRRRFVELGS
Sbjct: 301 MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS 343

[Close]
BLAST of Chy5G102090 vs. ExPASy TrEMBL
Match: A0A6J1I5P5 (pentatricopeptide repeat-containing protein At1g06270 OS=Cucurbita maxima OX=3661 GN=LOC111469834 PE=4 SV=1)

HSP 1 Score: 546.6 bits (1407), Expect = 7.5e-152
Identity = 275/343 (80.17%), Postives = 311/343 (90.67%), Query Frame = 0 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M +G  +TS+FLL+FH FL   SS+ SI+P+QTLQ+SIKAAVESKSYKKLPDLFPSLQEA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLSTFP+N RTQVVDEILQSLI +RPRS+ QFVH SLLFYTLQSPSP PLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGC P PQTH LLSSAWLKQR  +KSVA++L+DM+SIGY+PDS+ICNYLISS
Sbjct: 121 PVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I ELAEAFQVLKGMGGAGC+PDLESYGTLI ++TAVRRT +AVELLKEMVVKVKL P
Sbjct: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVT 300
           R+GT+INV+AALRANRE+RR VEIIELLE+ +++VGFESYE+LVEGCLECREYILAGKV 
Sbjct: 241 RRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELGS 344
           MGMT++G+IPYI+VR KVVEGLAGIGE ELASAVRRRF EL S
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS 343

[Close]
BLAST of Chy5G102090 vs. ExPASy TrEMBL
Match: A0A6J1G5M7 (pentatricopeptide repeat-containing protein At1g06270 OS=Cucurbita moschata OX=3662 GN=LOC111451115 PE=4 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 1.1e-150
Identity = 272/343 (79.30%), Postives = 311/343 (90.67%), Query Frame = 0 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M +G  +TS+FLL+FH FL Q SS+ SI+P+Q+LQ+SI+AAVESKSY+KLPDLFPSLQEA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLSTFP+N RT VVDEILQSLI +RPRS+ QFVH SLLFYTLQSPSP PLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVP PQTH LLSS WLKQR  +KSVA++L++M+SIGY+PDS+ICNYLISS
Sbjct: 121 PVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I ELAEAFQVLKGMGGAGC+PDLESYGTLI ++TAVRRT +AVELLKEMVVKVKL P
Sbjct: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGT+INV+AALRANRE+RR VEIIELLE+ +++VGFESYE+LVEGCLECREYILAGKV 
Sbjct: 241 RQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELGS 344
           MGMT++G+IPYI+VR KVVEGLAGIGE ELASAVRRRF EL S
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS 343

[Close]
BLAST of Chy5G102090 vs. NCBI nr
Match: XP_004139374.1 (pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativus] >KGN60845.1 hypothetical protein Csa_019208 [Cucumis sativus])

HSP 1 Score: 652 bits (1683), Expect = 1.18e-235
Identity = 334/343 (97.38%), Postives = 339/343 (98.83%), Query Frame = 0 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRS AKSVAN+LMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGTI NV+AALR NREVRR VEIIELLER++HDVGFESYELLVEGCLECREYILAGKVT
Sbjct: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300

Query: 301 MGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELGS 343
           MGMTDRGFIPYIKVRQ+VVEGLAGIGEVELASAVRRRFVELGS
Sbjct: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 343

[Close]
BLAST of Chy5G102090 vs. NCBI nr
Match: XP_008455557.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo] >XP_008455565.1 PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo])

HSP 1 Score: 634 bits (1635), Expect = 2.45e-228
Identity = 326/343 (95.04%), Postives = 333/343 (97.08%), Query Frame = 0 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFL Q SSIHSISPSQTLQDSIKAAVESKSYKKLP LFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLI +RPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVAN+LMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGC+PDLESYGTLI AATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVT 300
           RQ TIINV+AALRANREVRR VEIIELLER++HDVGFESYELLVEGCLECREYILAGKV 
Sbjct: 241 RQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI 300

Query: 301 MGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELGS 343
           M MTDRGFIPYIKVRQKVVEGL GIGE+ELASAVRRRFVELGS
Sbjct: 301 MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS 343

[Close]
BLAST of Chy5G102090 vs. NCBI nr
Match: KAA0063642.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18384.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 631 bits (1627), Expect = 4.06e-227
Identity = 325/343 (94.75%), Postives = 332/343 (96.79%), Query Frame = 0 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLLNFHHFL Q SSIHSISPSQTLQDSIKAAVESKSYKKLP LFPSLQEA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFPLNLRTQVVDEILQSLI +RPRSKSQFVHGSLLFYTLQSPSPFPLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGCVPSPQTHFLLSSAWLKQRS AKSVAN+LMDMQSIGYKPDSNICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LCSIGELAEAFQVLKGMGGAGC+PDLESYGTLI AATAVRRTDKAVELLKEMVVKVKLMP
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVT 300
           RQ TIINV+AALRANREVRR VEIIELLER++HDVGFESYELLVEGCLECREYILAGKV 
Sbjct: 241 RQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI 300

Query: 301 MGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELGS 343
           M MTDRGFIPYIKVRQKVVEGL GIGE+ELASAVRRRFVELGS
Sbjct: 301 MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS 343

[Close]
BLAST of Chy5G102090 vs. NCBI nr
Match: XP_038902935.1 (pentatricopeptide repeat-containing protein At1g06270 [Benincasa hispida] >XP_038902936.1 pentatricopeptide repeat-containing protein At1g06270 [Benincasa hispida] >XP_038902937.1 pentatricopeptide repeat-containing protein At1g06270 [Benincasa hispida])

HSP 1 Score: 587 bits (1514), Expect = 2.02e-209
Identity = 301/343 (87.76%), Postives = 321/343 (93.59%), Query Frame = 0 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           MNIGRTKTSAFLL FH FL QYSSIHSISPSQ LQ+SIKAAVESKSYKKLPDLFPSL+EA
Sbjct: 31  MNIGRTKTSAFLLGFHKFLRQYSSIHSISPSQALQESIKAAVESKSYKKLPDLFPSLREA 90

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           CHNPNLFLFLSTFP+N+RTQ+VDEILQSLISIRPRS+SQFVH SLLFYTLQ  SPFPLSL
Sbjct: 91  CHNPNLFLFLSTFPVNVRTQIVDEILQSLISIRPRSRSQFVHVSLLFYTLQISSPFPLSL 150

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSG VP+PQTH LLSSAWLKQRS +KSVAN+LMDM+SIGYKPDSNICNY+ISS
Sbjct: 151 PVLQRILHSGYVPAPQTHLLLSSAWLKQRSQSKSVANILMDMRSIGYKPDSNICNYIISS 210

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+  ELAEAFQVLKGMGGAGC PDLESYGTLI A TAVR+TDKAVELLKEMV+KVKL P
Sbjct: 211 LCATDELAEAFQVLKGMGGAGCFPDLESYGTLISAVTAVRQTDKAVELLKEMVLKVKLTP 270

Query: 241 RQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVT 300
           RQGTIINV+AALRANREVRR VEIIELLE+ +H+VGFESYELLVEGCLECREYILAGKVT
Sbjct: 271 RQGTIINVVAALRANREVRRAVEIIELLEKESHNVGFESYELLVEGCLECREYILAGKVT 330

Query: 301 MGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELGS 343
           MGMT+RGFIPYIKVRQKVVEGLAGIGE E ASAVRR+FV L S
Sbjct: 331 MGMTERGFIPYIKVRQKVVEGLAGIGEAEFASAVRRKFVGLKS 373

[Close]
BLAST of Chy5G102090 vs. NCBI nr
Match: XP_022971046.1 (pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022971047.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022971048.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima])

HSP 1 Score: 546 bits (1407), Expect = 1.32e-193
Identity = 275/343 (80.17%), Postives = 311/343 (90.67%), Query Frame = 0 

Query: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60
           M +G  +TS+FLL+FH FL   SS+ SI+P+QTLQ+SIKAAVESKSYKKLPDLFPSLQEA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120
           C NPN F FLSTFP+N RTQVVDEILQSLI +RPRS+ QFVH SLLFYTLQSPSP PLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISS 180
           PVLQRILHSGC P PQTH LLSSAWLKQR  +KSVA++L+DM+SIGY+PDS+ICNYLISS
Sbjct: 121 PVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISS 180

Query: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240
           LC+I ELAEAFQVLKGMGGAGC+PDLESYGTLI ++TAVRRT +AVELLKEMVVKVKL P
Sbjct: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVT 300
           R+GT+INV+AALRANRE+RR VEIIELLE+ +++VGFESYE+LVEGCLECREYILAGKV 
Sbjct: 241 RRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELGS 343
           MGMT++G+IPYI+VR KVVEGLAGIGE ELASAVRRRF EL S
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS 343

[Close]
BLAST of Chy5G102090 vs. TAIR 10
Match: AT1G06270.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 342.0 bits (876), Expect = 5.4e-94
Identity = 174/317 (54.89%), Postives = 232/317 (73.19%), Query Frame = 0 

Query: 27  SISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEACHNPNLFLFLSTFPLNLRTQVVDEIL 86
           SIS  + ++ +IK AVE+K Y ++P+L  SL+E   N  LF FLS F  + R +V+DEIL
Sbjct: 27  SISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQNSTLFSFLSAFQRHHRIRVIDEIL 86

Query: 87  QSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWL 146
           QS + +RPRS  + V+ SLL Y LQS  P PLS  +LQR L SGC+P+PQTH LLS AWL
Sbjct: 87  QSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAILQRTLRSGCLPNPQTHLLLSDAWL 146

Query: 147 KQRSHAKSVANMLMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDL 206
           ++R  ++SVA+++ +M+ IGY PD+  CNYL+SSLC++ +L EA +V++ M  AGCIPD+
Sbjct: 147 ERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCAVDKLDEAIKVVEEMSAAGCIPDV 206

Query: 207 ESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTIINVLAALRANREVRRTVEIIE 266
           ESYG +I++    R+T   V+++KEMV K  + PR+G +  V AALRANRE+ + +E+IE
Sbjct: 207 ESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIE 266

Query: 267 LLERNNHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIPYIKVRQKVVEGLAGIG 326
            +E  ++ V FESYE++VEGCLE REYILAGKV M MTDRGFIPYIKVRQKVVE L  IG
Sbjct: 267 FVESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRMTDRGFIPYIKVRQKVVERLINIG 326

Query: 327 EVELASAVRRRFVELGS 344
           E +LA  VR+R  EL S
Sbjct: 327 EWKLACTVRQRVSELRS 343

[Close]
BLAST of Chy5G102090 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 4.5e-16
Identity = 60/212 (28.30%), Postives = 96/212 (45.28%), Query Frame = 0 

Query: 131 CVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLISSLCSIGELAEA 190
           C+P   T+  L     K+    ++V  +L +MQS G  P   I N LI  LC  G+L   
Sbjct: 218 CLPDGYTYCTLMDGLCKEERIDEAVL-LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV 277

Query: 191 FQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMPRQGTIINVLA 250
            +++  M   GC+P+  +Y TLIH      + DKAV LL+ M V  K +P   T   ++ 
Sbjct: 278 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM-VSSKCIPNDVTYGTLIN 337

Query: 251 ALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGKVTMGMTDRGFIP 310
            L   R     V ++  +E   + +    Y +L+ G  +  +   A  +   M ++G  P
Sbjct: 338 GLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP 397

Query: 311 YIKVRQKVVEGLAGIGEVELASAVRRRFVELG 343
            I V   +V+GL   G+   A  +  R +  G
Sbjct: 398 NIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427

[Close]
BLAST of Chy5G102090 vs. TAIR 10
Match: AT4G31850.1 (proton gradient regulation 3 )

HSP 1 Score: 75.9 bits (185), Expect = 7.2e-14
Identity = 58/224 (25.89%), Postives = 106/224 (47.32%), Query Frame = 0 

Query: 119 SLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYLI 178
           ++ V +R++  G  PS QT+  L    L +R    SV  +L +M+++G KP+       I
Sbjct: 207 AMEVYRRMILEGFRPSLQTYSSL-MVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 266

Query: 179 SSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKL 238
             L   G++ EA+++LK M   GC PD+ +Y  LI A    R+ D A E+ ++M    + 
Sbjct: 267 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTG-RH 326

Query: 239 MPRQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEGCLECREYILAGK 298
            P + T I +L     NR++    +    +E++ H     ++ +LV+   +   +  A  
Sbjct: 327 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 386

Query: 299 VTMGMTDRGFIPYIKVRQKVVEGLAGIGEVELASAVRRRFVELG 343
               M D+G +P +     ++ GL  +  ++ A  +      LG
Sbjct: 387 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428

[Close]
BLAST of Chy5G102090 vs. TAIR 10
Match: AT1G62680.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 6.3e-10
Identity = 51/175 (29.14%), Postives = 81/175 (46.29%), Query Frame = 0 

Query: 118 LSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVANMLMDMQSIGYKPDSNICNYL 177
           L+L +L ++L  G  P   T   L + + + R+      +++  M  IGYKPD    N +
Sbjct: 138 LALSILGKMLKLGYEPDRVTIGSLVNGFCR-RNRVSDAVSLVDKMVEIGYKPDIVAYNAI 197

Query: 178 ISSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVK 237
           I SLC    + +AF   K +   G  P++ +Y  L++      R   A  LL +M +K K
Sbjct: 198 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKK 257

Query: 238 LMPRQGTIINVLAALRANREVRRTVEIIELLERNNHDVGFESYELLVEG-CLECR 292
           + P   T   +L A   N +V    E+ E + R + D    +Y  L+ G CL  R
Sbjct: 258 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDR 310

[Close]
BLAST of Chy5G102090 vs. TAIR 10
Match: AT1G79080.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-09
Identity = 38/139 (27.34%), Postives = 70/139 (50.36%), Query Frame = 0 

Query: 97  KSQFVHGSLLFYTLQSPSPFPLSLPVLQRILHSGCVPSPQTHFLLSSAWLKQRSHAKSVA 156
           K    H + L Y L   +    ++ V++ ++ SG +P    +  L +  L +R +     
Sbjct: 103 KPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQ-LCKRGNVGYAM 162

Query: 157 NMLMDMQSIGYKPDSNICNYLISSLCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAA 216
            ++  M+  GY  ++   N L+  LC +G L ++ Q ++ +   G  P+  +Y  L+ AA
Sbjct: 163 QLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAA 222

Query: 217 TAVRRTDKAVELLKEMVVK 236
              R TD+AV+LL E++VK
Sbjct: 223 YKERGTDEAVKLLDEIIVK 240

The following BLAST results are available for this feature:
BLAST of Chy5G102090 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LNC07.6e-9354.89Pentatricopeptide repeat-containing protein At1g06270 OS=Arabidopsis thaliana OX... [more]
O494366.4e-1528.30Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... [more]
Q9SZ521.0e-1225.89Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop... [more]
Q3ECK28.9e-0929.14Pentatricopeptide repeat-containing protein At1g62680, mitochondrial OS=Arabidop... [more]
A3KPF82.6e-0827.34Pentatricopeptide repeat-containing protein At1g79080, chloroplastic OS=Arabidop... [more]
BLAST of Chy5G102090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFL37.4e-18497.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013260 PE=4 SV=1[more]
A0A1S3C1B62.7e-17895.04pentatricopeptide repeat-containing protein At1g06270 OS=Cucumis melo OX=3656 GN... [more]
A0A5D3D4C72.3e-17794.75Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A6J1I5P57.5e-15280.17pentatricopeptide repeat-containing protein At1g06270 OS=Cucurbita maxima OX=366... [more]
A0A6J1G5M71.1e-15079.30pentatricopeptide repeat-containing protein At1g06270 OS=Cucurbita moschata OX=3... [more]
BLAST of Chy5G102090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139374.11.18e-23597.38pentatricopeptide repeat-containing protein At1g06270 [Cucumis sativus] >KGN6084... [more]
XP_008455557.12.45e-22895.04PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Cucumis melo] ... [more]
KAA0063642.14.06e-22794.75pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18384... [more]
XP_038902935.12.02e-20987.76pentatricopeptide repeat-containing protein At1g06270 [Benincasa hispida] >XP_03... [more]
XP_022971046.11.32e-19380.17pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022... [more]
BLAST of Chy5G102090 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G06270.15.4e-9454.89Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G20090.14.5e-1628.30Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G31850.17.2e-1425.89proton gradient regulation 3 [more]
AT1G62680.16.3e-1029.14Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G79080.11.8e-0927.34Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 159..214
e-value: 2.4E-4
score: 21.1
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 208..233
e-value: 0.0013
score: 16.7
coord: 173..205
e-value: 8.1E-6
score: 23.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 170..204
score: 10.215989
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 118..281
e-value: 1.8E-22
score: 82.1
NoneNo IPR availablePANTHERPTHR47933:SF18PPR CONTAINING PLANT-LIKE PROTEINcoord: 1..343
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 1..343

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy5G102090.1Chy5G102090.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding