Chy5G101510 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G101510
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	F-box domain LysM domain containing protein
Location	chrH05: 15609519 .. 15611770 (-)
RNA-Seq Expression	Chy5G101510
Synteny	Chy5G101510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATGCTGTTGCGAACAAGACGACGACGTTGAGATCCTCAGACACCTCAATCCCTCCCCGGCCCTTCACTCTCCACCGCCGCAACCTCCACCAGCGGATCATTCCACTGCCATATTGTCTCCCATGAACTCTCACTTTTTCGCCCTCTCCTGCCGCGACATCCTCCGCCTCATCTTCGAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCGTTTGCCGTCTATGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCCGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGGTCGGGAAGCCGAGCTCCTGGAGCTTCTGGAGAGATAATTGCCTTGGGAAGTTTGCGATTTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTTAAGTATTCTGTTCAGGTATGGGCTTCGAATATTATTATTGTCTTATTTGAGAAAGTGGCTGGAAATTAGGGTAAGAAACAGTAGTAGAATACTAGAATTTCTGAGAATCAATTCAATTTTAAGAAGTCGGAATCATCAATTTTCCTTGTTTTCTCTGAAAAACACGACGATGCGGCAGATATATGGCTGTTCAAATTTTATAACTTCTCTTACTGAATTTTTGTTGTGTTGGATGTGGAAACATATGAATTGAAAGTAAGGGAGCTAGAGTACTGAGAACACTTTGAACTTTCAGTACTCCTGTTGTAGCTATATGGTTTATTGCAGCAATGTAGCTTATAGATACTTGATTTCTTTAACATTGATCTTGAAGGCACTGCTGCTTTGAAGTCCTAACATTAATTGAAATTTCTTAACCTTTGAAAAAATCTGTATTTCATACTCTGTTGTTTGTGTTCCCAACTCTTGAGTTCTTGTAAAGTTCAATTAAGAAGGACATTCATGTTCCACTGTTGAGATGAACTCTTTCTTGTGCCTATAAACTTTGATAAATTATTGAAATCACCAGCAGTTTGAACAACAGTGGAAACTAATGTGTGTATATATATATATATATATATAATGAAATAAACTACTTTCGTTGAGGGGAAAAAATGAAAGAACGAAAAAATCGAAGCCCATCAAAGAGGAACCTCTCTAAATAAAACGAACCAATCAAGAAAAATAATGCCTCTAGAATAGTTAAGAAAGAACTTCGAAGACGAACCCCAAAGAATGAATCTTAGAGCTCAAAAGTCACATCACTAGGTTTCCTTGCCATCTCTCTAAACACTTTGTTCATTTTCTCCCTAAGATTCCAGATGATAGCACATACCTCAGCCACCCATGAAAAACACCCCCTCGGAGGAAATGGAAAATGGAGGAGAAACTTCTCGATCATATCATTTGTGTGAAACTTCTATATCTTTCACCTCAATACATGGGTTACAAAAATGAAGAATGCATTTTTACACATGCTTCCTAATCATTGTAAATTGTAAAATATCAATTAGGAAGGATCAAGTATAAATTTTGAAATCAGCTCTTTTTGGTGGCCGTGGACTTGGGTGTGTTGTTGAAATCATCATAGTTTTAACAAAAGTTGAAACTTGTATATATTTTACAACATTAACTTGCAGCAAAAATGAAGAGTGAGGTAGTTTATTTTCCCCCACTCCCAAGCCCTTGTAATAAATCAATTAGCAAGGGTCAAGTTCAATTTGAGATCAACCTTTTTTCTTATGACTATGGACTTTGGTGTATTAATCTTGTTTACATATATTGTTCGTGTAGGTTATATGCATACAACGTCTAAATAACATGACGCAGTACCATTGCATTGTTGAGACAATGCTTTTTGATGGTTATGGACTTTGGTGTATTAATTTTGTGCGTTTATCTATACATCTTTCTTGTAGGTTACAGACATAAAACGTCTGAACAACATGATGAGTGACCATGGCATATACTCAAGAGAAAGATTGTTAATCCCCATTGACAATCCCAATATACTCATTAACAGTATATGTTACATCGAGATGGATGCTATTGCAAAACGGGAAGTTGCAGTGTTATATTTGGACGGAATCCCCATGACCCAACATTTGTATGGTAAGGTGACATCCGAACAAGGTATGTCTTCTGTTCAAGTGAACAAGCGGGTACTTCATTCATTGAGTCGAAGCATGATGGTTGACGACGAAACCGCTCAATATTACTTATCCATTTCCAATGGCAATCCTCGAACTGCTCTTACAGAATTTGCCGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAA

mRNA sequence

ATGGGATGCTGTTGCGAACAAGACGACGACGTTGAGATCCTCAGACACCTCAATCCCTCCCCGGCCCTTCACTCTCCACCGCCGCAACCTCCACCAGCGGATCATTCCACTGCCATATTGTCTCCCATGAACTCTCACTTTTTCGCCCTCTCCTGCCGCGACATCCTCCGCCTCATCTTCGAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCGTTTGCCGTCTATGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCCGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGGTCGGGAAGCCGAGCTCCTGGAGCTTCTGGAGAGATAATTGCCTTGGGAAGTTTGCGATTTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTTAAGTATTCTGTTCAGGTTACAGACATAAAACGTCTGAACAACATGATGAGTGACCATGGCATATACTCAAGAGAAAGATTGTTAATCCCCATTGACAATCCCAATATACTCATTAACAGTATATGTTACATCGAGATGGATGCTATTGCAAAACGGGAAGTTGCAGTGTTATATTTGGACGGAATCCCCATGACCCAACATTTGTATGGTAAGGTGACATCCGAACAAGGTATGTCTTCTGTTCAAGTGAACAAGCGGGTACTTCATTCATTGAGTCGAAGCATGATGGTTGACGACGAAACCGCTCAATATTACTTATCCATTTCCAATGGCAATCCTCGAACTGCTCTTACAGAATTTGCCGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAA

Coding sequence (CDS)

ATGGGATGCTGTTGCGAACAAGACGACGACGTTGAGATCCTCAGACACCTCAATCCCTCCCCGGCCCTTCACTCTCCACCGCCGCAACCTCCACCAGCGGATCATTCCACTGCCATATTGTCTCCCATGAACTCTCACTTTTTCGCCCTCTCCTGCCGCGACATCCTCCGCCTCATCTTCGAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCGTTTGCCGTCTATGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCCGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGGTCGGGAAGCCGAGCTCCTGGAGCTTCTGGAGAGATAATTGCCTTGGGAAGTTTGCGATTTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTTAAGTATTCTGTTCAGGTTACAGACATAAAACGTCTGAACAACATGATGAGTGACCATGGCATATACTCAAGAGAAAGATTGTTAATCCCCATTGACAATCCCAATATACTCATTAACAGTATATGTTACATCGAGATGGATGCTATTGCAAAACGGGAAGTTGCAGTGTTATATTTGGACGGAATCCCCATGACCCAACATTTGTATGGTAAGGTGACATCCGAACAAGGTATGTCTTCTGTTCAAGTGAACAAGCGGGTACTTCATTCATTGAGTCGAAGCATGATGGTTGACGACGAAACCGCTCAATATTACTTATCCATTTCCAATGGCAATCCTCGAACTGCTCTTACAGAATTTGCCGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAA

Protein sequence

MGCCCEQDDDVEILRHLNPSPALHSPPPQPPPADHSTAILSPMNSHFFALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIDNPNILINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQYYLSISNGNPRTALTEFAEDIRWERHMSIA*

Homology

[Close]

BLAST of Chy5G101510 vs. ExPASy Swiss-Prot
Match: Q9FZ32 (F-box protein At1g55000 OS=Arabidopsis thaliana OX=3702 GN=At1g55000 PE=1 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.6e-74
Identity = 133/220 (60.45%), Postives = 173/220 (78.64%), Query Frame = 0


Query: 49  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSW 108
           AL CRD L +IF+ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPID 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPNILINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLS 228
           NP IL N+ CY+E+D  AKREVAVLYL+G P  +      T++Q   S    +R++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETAQYYLSISNGNPRTALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ G+PR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of Chy5G101510 vs. ExPASy Swiss-Prot
Match: Q6DEF4 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Danio rerio OX=7955 GN=lysmd2 PE=2 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 6.8e-04
Identity = 21/52 (40.38%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 116 LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI 168
           LG+  I HR+  G++L  +A+KY V +  IKR+N + S+  I+ R  L IP+
Sbjct: 60  LGEKYIEHRVTDGETLQGIALKYGVTMEQIKRVNKLFSNDCIFLRNTLSIPV 111

[Close]

BLAST of Chy5G101510 vs. ExPASy Swiss-Prot
Match: Q7Z3D4 (LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Homo sapiens OX=9606 GN=LYSMD3 PE=1 SV=2)

HSP 1 Score: 45.8 bits (107), Expect = 8.8e-04
Identity = 21/67 (31.34%), Postives = 38/67 (56.72%), Query Frame = 0


Query: 112 RDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIDNPN 171
           RD       ++  I  GD+L ++A++Y   V DIKR+NN++SD   ++   + IP+   +
Sbjct: 56  RDRLDDIIVLTKDIQEGDTLNAIALQYCCTVADIKRVNNLISDQDFFALRSIKIPVKKFS 115

Query: 172 ILINSIC 179
            L  ++C
Sbjct: 116 SLTETLC 122

[Close]

BLAST of Chy5G101510 vs. ExPASy TrEMBL
Match: A0A0A0LFS6 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022840 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.2e-149
Identity = 263/269 (97.77%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPALHSPPPQPPPADHSTAILSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNPSPALHSPPPQPPPADHS AILSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIF 60

Query: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120
           ENLSIPDLARSSCVCRLWHSVASDQEIVS AFKAPWKVKDVVGKPSSWSFWRDNCLGKFA
Sbjct: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIDNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI NPN+LINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240

Query: 241 YLSISNGNPRTALTEFAEDIRWERHMSIA 270
           YLSISNGNPR ALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISNGNPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of Chy5G101510 vs. ExPASy TrEMBL
Match: A0A6J1D9A3 (F-box protein At1g55000 OS=Momordica charantia OX=3673 GN=LOC111018786 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 8.5e-135
Identity = 241/269 (89.59%), Postives = 252/269 (93.68%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPALHSPPPQPPPADHSTAILSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNP+ A+HSP   PP AD STA+LSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60

Query: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120
           E LSIPDLARSSCVCRLW SVASD EIV+ AFKAPWK+KDV+GKPSS SFWRDNCLGKFA
Sbjct: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIDNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPI NPNILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIP T HLYGKVT EQGMSSVQVNK+VLHSLSRSMMVDDETA+Y
Sbjct: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240

Query: 241 YLSISNGNPRTALTEFAEDIRWERHMSIA 270
           YLSIS+G+PR ALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of Chy5G101510 vs. ExPASy TrEMBL
Match: A0A6J1FH66 (F-box protein At1g55000 OS=Cucurbita moschata OX=3662 GN=LOC111443952 PE=4 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.4e-131
Identity = 237/270 (87.78%), Postives = 249/270 (92.22%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPALHSPPPQPPP-ADHSTAILSPMNSHFFALSCRDILRLI 60
           MGCCC++DDDVEILRHL+PSP + SPP Q P   D STA+LSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSWSFWRDNCLGKF 120
           FE LSIPDLARSSCV RLW+SVASDQEIVS AFKAPWKVKDV+GKPSS SFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIDNPNILINSICY 180
           AISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPI NPNILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIP T HLYGK T++QGMSSVQV KRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISNGNPRTALTEFAEDIRWERHMSIA 270
           YYLSIS+G+PR ALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of Chy5G101510 vs. ExPASy TrEMBL
Match: A0A6J1HS58 (F-box protein At1g55000 OS=Cucurbita maxima OX=3661 GN=LOC111465634 PE=4 SV=1)

HSP 1 Score: 473.8 bits (1218), Expect = 4.8e-130
Identity = 235/270 (87.04%), Postives = 247/270 (91.48%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPALHSPPPQPPP-ADHSTAILSPMNSHFFALSCRDILRLI 60
           MGCCC++DDDVEILRHL+PSP + SPP Q P     STA+LSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPGSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSWSFWRDNCLGKF 120
           FE LSIPDLARSSCV RLW+SVASDQEIVS AFKAPWKVKDV+GKPSS SFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIDNPNILINSICY 180
           AISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRER+LIPI NPNILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERMLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIP T HLYGK T +QGMSSVQV KRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETDDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISNGNPRTALTEFAEDIRWERHMSIA 270
           YYLSIS+G+PR ALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of Chy5G101510 vs. ExPASy TrEMBL
Match: A0A5A7TYE5 (Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00510 PE=3 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.2e-117
Identity = 210/218 (96.33%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPALHSPPPQPPPADHSTAILSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNPSP +HSPP QPPPADHSTAILSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPPVHSPPLQPPPADHSTAILSPMNSHFFALSCRDILRLIF 60

Query: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120
           E+LSIPDLARSSCVCRLWHSVASDQEIV+ AFKAPWKVKDVVGKPSSWSFWRDNCLGKFA
Sbjct: 61  EHLSIPDLARSSCVCRLWHSVASDQEIVAGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIDNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI NPNILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQ 219
           EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQ
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQ 218

[Close]

BLAST of Chy5G101510 vs. NCBI nr
Match: XP_004139174.1 (F-box protein At1g55000 [Cucumis sativus] >KGN60915.1 hypothetical protein Csa_023439 [Cucumis sativus])

HSP 1 Score: 536 bits (1381), Expect = 4.13e-192
Identity = 263/269 (97.77%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPALHSPPPQPPPADHSTAILSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNPSPALHSPPPQPPPADHS AILSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPALHSPPPQPPPADHSAAILSPMNSHFFALSCRDILRLIF 60

Query: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120
           ENLSIPDLARSSCVCRLWHSVASDQEIVS AFKAPWKVKDVVGKPSSWSFWRDNCLGKFA
Sbjct: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIDNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI NPN+LINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPNMLINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY
Sbjct: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240

Query: 241 YLSISNGNPRTALTEFAEDIRWERHMSIA 269
           YLSISNGNPR ALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISNGNPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of Chy5G101510 vs. NCBI nr
Match: XP_038877035.1 (F-box protein At1g55000 [Benincasa hispida])

HSP 1 Score: 496 bits (1278), Expect = 2.07e-176
Identity = 244/269 (90.71%), Postives = 253/269 (94.05%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPALHSPPPQPPPADHSTAILSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNPSP + S PP+PPP D S  +LSPMNSHF ALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPSPPVQSLPPEPPPEDSSAVVLSPMNSHFLALSCRDILRLIF 60

Query: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120
           ENLSIPDLARSSCV RLWHSVASDQEIVS AFKAPWKVKDVVGKPSSWSFWRDNCLGKFA
Sbjct: 61  ENLSIPDLARSSCVSRLWHSVASDQEIVSGAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIDNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQVTDIKRLNNM+SDHGIYSRERLLIPI NPNILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMISDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIP+T HLYGK T E+GMSSVQVNKRVLH LSRSMMVDDETAQY
Sbjct: 181 EMDAIAKREVAVLYLDGIPITHHLYGKETCERGMSSVQVNKRVLHLLSRSMMVDDETAQY 240

Query: 241 YLSISNGNPRTALTEFAEDIRWERHMSIA 269
           YLSISNG+PR ALTEFAEDIRWERH+SIA
Sbjct: 241 YLSISNGDPRAALTEFAEDIRWERHLSIA 269

[Close]

BLAST of Chy5G101510 vs. NCBI nr
Match: XP_022150720.1 (F-box protein At1g55000 [Momordica charantia])

HSP 1 Score: 487 bits (1253), Expect = 1.34e-172
Identity = 241/269 (89.59%), Postives = 252/269 (93.68%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPALHSPPPQPPPADHSTAILSPMNSHFFALSCRDILRLIF 60
           MGCCC+QDDDVEILRHLNP+ A+HSP   PP AD STA+LSPMNSHFFALSCRDILRLIF
Sbjct: 1   MGCCCDQDDDVEILRHLNPAIAVHSPATLPPEADSSTAVLSPMNSHFFALSCRDILRLIF 60

Query: 61  ENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSWSFWRDNCLGKFA 120
           E LSIPDLARSSCVCRLW SVASD EIV+ AFKAPWK+KDV+GKPSS SFWRDNCLGKFA
Sbjct: 61  EKLSIPDLARSSCVCRLWQSVASDHEIVAGAFKAPWKLKDVIGKPSSGSFWRDNCLGKFA 120

Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIDNPNILINSICYI 180
           ISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPI NPNILINSICYI
Sbjct: 121 ISHRILRGDSLASLAVKYSVQVMDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICYI 180

Query: 181 EMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQY 240
           EMDAIAKREVAVLYLDGIP T HLYGKVT EQGMSSVQVNK+VLHSLSRSMMVDDETA+Y
Sbjct: 181 EMDAIAKREVAVLYLDGIPTTHHLYGKVTCEQGMSSVQVNKQVLHSLSRSMMVDDETARY 240

Query: 241 YLSISNGNPRTALTEFAEDIRWERHMSIA 269
           YLSIS+G+PR ALTEFAEDIRWERHMSIA
Sbjct: 241 YLSISHGDPRAALTEFAEDIRWERHMSIA 269

[Close]

BLAST of Chy5G101510 vs. NCBI nr
Match: XP_022937590.1 (F-box protein At1g55000 [Cucurbita moschata])

HSP 1 Score: 475 bits (1222), Expect = 7.36e-168
Identity = 237/270 (87.78%), Postives = 249/270 (92.22%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPALHSPPPQPPPA-DHSTAILSPMNSHFFALSCRDILRLI 60
           MGCCC++DDDVEILRHL+PSP + SPP Q P   D STA+LSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSWSFWRDNCLGKF 120
           FE LSIPDLARSSCV RLW+SVASDQEIVS AFKAPWKVKDV+GKPSS SFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIDNPNILINSICY 180
           AISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPI NPNILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIP T HLYGK T++QGMSSVQV KRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGKETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISNGNPRTALTEFAEDIRWERHMSIA 269
           YYLSIS+G+PR ALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of Chy5G101510 vs. NCBI nr
Match: KAG6586259.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021103.1 F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 474 bits (1219), Expect = 2.11e-167
Identity = 236/270 (87.41%), Postives = 249/270 (92.22%), Query Frame = 0


Query: 1   MGCCCEQDDDVEILRHLNPSPALHSPPPQPPPA-DHSTAILSPMNSHFFALSCRDILRLI 60
           MGCCC++DDDVEILRHL+PSP + SPP Q P   D STA+LSPMNSHFFALSCRDILRLI
Sbjct: 1   MGCCCDEDDDVEILRHLHPSPTVQSPPQQQPTLPDSSTAVLSPMNSHFFALSCRDILRLI 60

Query: 61  FENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSWSFWRDNCLGKF 120
           FE LSIPDLARSSCV RLW+SVASDQEIVS AFKAPWKVKDV+GKPSS SFWRDNCLGKF
Sbjct: 61  FEKLSIPDLARSSCVSRLWNSVASDQEIVSGAFKAPWKVKDVIGKPSSGSFWRDNCLGKF 120

Query: 121 AISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIDNPNILINSICY 180
           AISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPI NPNILINSICY
Sbjct: 121 AISHRILRGDSLASLAVKYSVQVIDIKRLNNMMSDHGIYSRERLLIPIGNPNILINSICY 180

Query: 181 IEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLSRSMMVDDETAQ 240
           IEMDAIAKREVA LYLDGIP T HLYG+ T++QGMSSVQV KRVLHSLSRSMMVDDETAQ
Sbjct: 181 IEMDAIAKREVATLYLDGIPTTHHLYGRETNDQGMSSVQVKKRVLHSLSRSMMVDDETAQ 240

Query: 241 YYLSISNGNPRTALTEFAEDIRWERHMSIA 269
           YYLSIS+G+PR ALTEFAEDIRWERHM +A
Sbjct: 241 YYLSISDGDPRAALTEFAEDIRWERHMGMA 270

[Close]

BLAST of Chy5G101510 vs. TAIR 10
Match: AT1G55000.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 279.6 bits (714), Expect = 2.6e-75
Identity = 133/220 (60.45%), Postives = 173/220 (78.64%), Query Frame = 0


Query: 49  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSW 108
           AL CRD L +IF+ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPID 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPNILINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLS 228
           NP IL N+ CY+E+D  AKREVAVLYL+G P  +      T++Q   S    +R++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETAQYYLSISNGNPRTALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ G+PR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of Chy5G101510 vs. TAIR 10
Match: AT1G55000.2 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 279.6 bits (714), Expect = 2.6e-75
Identity = 133/220 (60.45%), Postives = 173/220 (78.64%), Query Frame = 0


Query: 49  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSW 108
           AL CRD L +IF+ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPID 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPNILINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLS 228
           NP IL N+ CY+E+D  AKREVAVLYL+G P  +      T++Q   S    +R++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETAQYYLSISNGNPRTALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ G+PR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of Chy5G101510 vs. TAIR 10
Match: AT1G55000.3 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 279.6 bits (714), Expect = 2.6e-75
Identity = 133/220 (60.45%), Postives = 173/220 (78.64%), Query Frame = 0


Query: 49  ALSCRDILRLIFENLSIPDLARSSCVCRLWHSVASDQEIVSRAFKAPWKVKDVVGKPSSW 108
           AL CRD L +IF+ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K++VG+P+S 
Sbjct: 2   ALYCRDTLIIIFQKLTVADLARASCVCKVWNSVATEDDLVVSAFTAPWRIKELVGRPASV 61

Query: 109 SFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPID 168
           SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRLNNMMSDHGIYSR+RLLIPI 
Sbjct: 62  SFWRDNGIWKFAISHRICRGDSVTSLAVKYAVQVMDIKRLNNMMSDHGIYSRDRLLIPIS 121

Query: 169 NPNILINSICYIEMDAIAKREVAVLYLDGIPMTQHLYGKVTSEQGMSSVQVNKRVLHSLS 228
           NP IL N+ CY+E+D  AKREVAVLYL+G P  +      T++Q   S    +R++ SL 
Sbjct: 122 NPEILANTTCYVELDKYAKREVAVLYLEGAPKREQPV-PGTNQQSNLSADGKRRLIESLR 181

Query: 229 RSMMVDDETAQYYLSISNGNPRTALTEFAEDIRWERHMSI 269
           RSM VDD TA YYL+I+ G+PR+AL+EF+ D+RWER   +
Sbjct: 182 RSMQVDDGTALYYLAIAEGDPRSALSEFSADLRWERQAGL 220

[Close]

BLAST of Chy5G101510 vs. TAIR 10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 52.8 bits (125), Expect = 5.1e-07
Identity = 26/79 (32.91%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 89  SRAFKAPWKVKDVVGKPSSWSFWRDNCLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL 148
           S+  + P          SS  F   N   +  I HRI + D+LA +A+KY V+V D+K++
Sbjct: 46  SKILRIPSPTSSPPPSSSSPPFHGSNSPDRGYIEHRISKFDTLAGVAIKYGVEVADVKKM 105

Query: 149 NNMMSDHGIYSRERLLIPI 168
           NN+++D  +++ + L IP+
Sbjct: 106 NNLVTDLQMFALKSLQIPL 124

[Close]

BLAST of Chy5G101510 vs. TAIR 10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein )

HSP 1 Score: 47.8 bits (112), Expect = 1.7e-05
Identity = 20/47 (42.55%), Postives = 34/47 (72.34%), Query Frame = 0


Query: 121 ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI 168
           I HR+ + D+LA +A+KY V+V DI +LN +++D  +++ E L IP+
Sbjct: 70  IEHRVSKFDTLAGIAIKYGVEVADITKLNGLVTDLQMFALESLRIPL 116

The following BLAST results are available for this feature:

BLAST of Chy5G101510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ32	3.6e-74	60.45	F-box protein At1g55000 OS=Arabidopsis thaliana OX=3702 GN=At1g55000 PE=1 SV=1	[more]
Q6DEF4	6.8e-04	40.38	LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Danio rer...	[more]
Q7Z3D4	8.8e-04	31.34	LysM and putative peptidoglycan-binding domain-containing protein 3 OS=Homo sapi...	[more]

BLAST of Chy5G101510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LFS6	1.2e-149	97.77	LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G022840 PE=4 S...	[more]
A0A6J1D9A3	8.5e-135	89.59	F-box protein At1g55000 OS=Momordica charantia OX=3673 GN=LOC111018786 PE=4 SV=1	[more]
A0A6J1FH66	3.4e-131	87.78	F-box protein At1g55000 OS=Cucurbita moschata OX=3662 GN=LOC111443952 PE=4 SV=1	[more]
A0A6J1HS58	4.8e-130	87.04	F-box protein At1g55000 OS=Cucurbita maxima OX=3661 GN=LOC111465634 PE=4 SV=1	[more]
A0A5A7TYE5	1.2e-117	96.33	Lipoxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00510 P...	[more]

BLAST of Chy5G101510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139174.1	4.13e-192	97.77	F-box protein At1g55000 [Cucumis sativus] >KGN60915.1 hypothetical protein Csa_0...	[more]
XP_038877035.1	2.07e-176	90.71	F-box protein At1g55000 [Benincasa hispida]	[more]
XP_022150720.1	1.34e-172	89.59	F-box protein At1g55000 [Momordica charantia]	[more]
XP_022937590.1	7.36e-168	87.78	F-box protein At1g55000 [Cucurbita moschata]	[more]
KAG6586259.1	2.11e-167	87.41	F-box protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021103.1 F-b...	[more]

BLAST of Chy5G101510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G55000.1	2.6e-75	60.45	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.2	2.6e-75	60.45	peptidoglycan-binding LysM domain-containing protein	[more]
AT1G55000.3	2.6e-75	60.45	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G08200.1	5.1e-07	32.91	peptidoglycan-binding LysM domain-containing protein	[more]
AT5G23130.1	1.7e-05	42.55	Peptidoglycan-binding LysM domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 51..91 e-value: 0.0082 score: 25.3
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 54..85 e-value: 3.2E-6 score: 26.9
IPR018392	LysM domain	SMART	SM00257	LysM_2	coord: 122..166 e-value: 3.3E-4 score: 30.0
IPR018392	LysM domain	PFAM	PF01476	LysM	coord: 124..166 e-value: 9.5E-7 score: 28.8
IPR018392	LysM domain	PROSITE	PS51782	LYSM	coord: 121..165 score: 11.711089
IPR018392	LysM domain	CDD	cd00118	LysM	coord: 121..165 e-value: 8.29917E-8 score: 45.5541
IPR036779	LysM domain superfamily	GENE3D	3.10.350.10	LysM domain	coord: 117..172 e-value: 2.4E-13 score: 51.4
IPR036779	LysM domain superfamily	SUPERFAMILY	54106	LysM domain	coord: 122..166
None	No IPR available	GENE3D	1.20.1280.50		coord: 53..87 e-value: 5.4E-8 score: 34.7
None	No IPR available	PANTHER	PTHR20932:SF8	LD22649P	coord: 1..268
IPR045030	LysM and putative peptidoglycan-binding domain-containing protein 1-4	PANTHER	PTHR20932	LOC443603 PROTEIN-RELATED	coord: 1..268
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 54..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G101510.1	Chy5G101510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0031408	oxylipin biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function	GO:0005515	protein binding