Chy5G100750 (gene) Cucumber (hystrix) v1

Overview
NameChy5G100750
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH05: 14890954 .. 14893772 (-)
RNA-Seq ExpressionChy5G100750
SyntenyChy5G100750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTAAGGCGACGGATTCGAAGGCGGTGGTGACGGACCAAAGGACTTCGTCAACGATGGAAATGTTGAGAAGGCCGCGACGCCAGCGGCGGAACCAGGCGGAGGAGGTCCAGTTCCATGAGAAAAGCGAGGAGAGAAGGTGGGTCCATCGGAAAATGGAGGATCTGAAGGAAAAATCGAATTCGGTCCAAGGGAATGCGGATCTCGGTGAGGTTCCCGCCATTGCTGTCTCCTACTCCGGAAAGTGTAGAGAGATTATAGAGAGAGTCTTTGTGAGCACTGAGCGGAGGTAACAAAATTTGAAAGACAGAGTGGGAATGGGAATTATTAAGTGCGGCCGTGCGTAGACGAAATTTTATCATTTCTTTTACTCCAAATTTCAACAAATTCAATATCAATTTAATATCAACTAAAGTATTAAGTAACGTTGGATAAATAAATCCATATTAATCAAAACGTTCATAAATTTTAGATTTCCAAATAAATTACTATTATGGTCTTCTTTTTATATTATCATTTCAAAACGTTGGATAAAAATTTGATAGAATTTAAAATTTTTGTTATAGATGGTAAATATTTTATAAAATTTGTTATTTTTTAAAAAAATTCTTTTTTTATGTTGTCTATTAGTATTTTTATTATATTAATTTTGAGAATATATCGGTAAAATAATTCTAAATTTATTACTTTTAATATTTTAAATAAAATTTAATTTTCAATACAAGAATAAACTGTAAGTTTAGTTTCTGTTTATTAGATGTTGAACTAATTTGAAATTATTTAACATGTCGTGATCTTATAGTTTGAACTTTCATGTTGTCTTGTTTAATAGAAGTTAAAATTATTTATTTTGTGTTTGACCTATTAGATAATTTTTTTAATTAACAAATCTACTTGTCATAAAAAAAATCAAACTTATTTAATATAACTACTAATTTCTTCTTTTTAAATTCCAACATGGAAGTTGTTAGACACAATTGGAAAGACTTTTAATTATTTAATTACCACATAGGTTAAAAATTTAGGTAAGAAACACTTTTTAAACTTTATTGATCGAAATTATAATTTTACAATTTACGTAACATTATAAAGAATGGAGCGTTTGACTCTCAACTTGAAATTGGTGAAATTATCCAACTCCAAGTTTTACCCTCTAAATATAATAGTAATATTTACAATTATTTATTGCTATTTCAAATCTTTATTTATTATAGTTTTTTTTTAATCATTTATATTGAGTATTAATATTTTTAATTGAAAACCTTTGTTGTTTATCTGTATTTTTATCATAAATTTTGAAAACTTATTACTGAAATAGCATTAAAATCATTGTTAATAGTTTAACCAATTTTACCAAATTTGGTAAAGATGTTGTCCAATTCGATAAATGAATTAATTTATAAGTAGTCTCAATTTTACTACTACGCTAACTCATTATTTTGAAATTAGCTTTCTTAAATTACATTTATTTTCTTTTTTTACTATTAAAACTCCTTATGACTAGGTTAGTAATTATACTTTGGAATATGAATTATAGCAGGATTTTAGACATTATATTCTTATTGAAAATTGAAAATTTTATACATAATGCTTGTTAGATCGATATATTTGACTACATTCAATAAAAGAAAAATTGCATTAGATGACAAAAACATTTAAAAAAACAGTAGTCAATGACACCTATTTTTTTTTGTATATTACGAATATGACAAAGTTAGTGATATCATACGGTTATCAAAAAGCTATCAGAAAGTTATCGGCTTGTGAATTTGCTATTTTTGCAATTTAGAAAATGTAGTAGCTCACTCTATTACCATATATTTATTTCTATTTTTGCCGGCGCCCCTTAATAAAATGTGCATATTTTGTAGCTTGTAATCTATTAATCTTTTTATATGGATATTTTATTCTAGATGAAATCCTACTTGGTTCTTAAATAAATAGAAAAATAATAATAACAATTGATACGTCAACTAACATACAAACATTGTAATGACCGAAAAGTTTGTGATTTAATTTTTCTTATACCTCGAAAGAAATTAGTTTGATTTTCACCCGTTTTTTTTACTAAAAAAAACCGAAATTCAATGACTAAGCTAGACTACTTGATTTGAAATTAGTGTATAGGTTAAATAAATTAGTTATTGTTTAATGTAAATGTACATTAAACTAGAAGAAATAGATCAAGTTTCATGATATGCCTTTTATTACAAGAAAAAAGGAAATAATTCAAATATTTTATCATTAATTATTATTATTATTCTAAAAGTATAATTAACCATTATTATTTTGTAGTATTTTTTTTAGGAATTTTTAATTTGTATATTGATTGATATAAATTTGATGGTTGACATTTATAAGTAGATGTAGATGCCTAGATGGAAAGGTTTTTAAGTCACGTGCCTTAACTTAAGTGTTACATTTGAATATCAACTCAAACACTTTTTTATTAAAATATGACTACTAAAATATTAATACAAGGATTAAAATAAATGTGAAAAAAATTAACTAATTACACTCCATAGTGAAAAAATCACTTGAAAACAAGATTTATTTATTAACGGTCAATGTCATATTTTATCATTTTCTAAATTGACCATAGTCTGTTTGGTCGCAATTTTGTCAAAAAAATCGACTTTGACCCGTCGATGATCATCTCTAGTTGTGGTAAGGAATTCTTGATGAATGTCACCATTTGAAAGGAACACAAAGCTAAATGTCAATGCTTTAAATCCTTCCACGGGTGGGATGAGAGTTGGTGTGATTTTGCATGACTTGCAGGGGAGAGGGTGGTGCTATTTTTTACGAGATCTAG

mRNA sequence

ATGGAGACTAAGGCGACGGATTCGAAGGCGGTGGTGACGGACCAAAGGACTTCGTCAACGATGGAAATGTTGAGAAGGCCGCGACGCCAGCGGCGGAACCAGGCGGAGGAGGTCCAGTTCCATGAGAAAAGCGAGGAGAGAAGGTGGGTCCATCGGAAAATGGAGGATCTGAAGGAAAAATCGAATTCGGTCCAAGGGAATGCGGATCTCGGTGAGGTTCCCGCCATTGCTGTCTCCTACTCCGGAAAGTGTAGAGAGATTATAGAGAGAGTCTTTGTGAGCACTGAGCGGAGGGGAGAGGGTGGTGCTATTTTTTACGAGATCTAG

Coding sequence (CDS)

ATGGAGACTAAGGCGACGGATTCGAAGGCGGTGGTGACGGACCAAAGGACTTCGTCAACGATGGAAATGTTGAGAAGGCCGCGACGCCAGCGGCGGAACCAGGCGGAGGAGGTCCAGTTCCATGAGAAAAGCGAGGAGAGAAGGTGGGTCCATCGGAAAATGGAGGATCTGAAGGAAAAATCGAATTCGGTCCAAGGGAATGCGGATCTCGGTGAGGTTCCCGCCATTGCTGTCTCCTACTCCGGAAAGTGTAGAGAGATTATAGAGAGAGTCTTTGTGAGCACTGAGCGGAGGGGAGAGGGTGGTGCTATTTTTTACGAGATCTAG

Protein sequence

METKATDSKAVVTDQRTSSTMEMLRRPRRQRRNQAEEVQFHEKSEERRWVHRKMEDLKEKSNSVQGNADLGEVPAIAVSYSGKCREIIERVFVSTERRGEGGAIFYEI*
Homology
[Close]
BLAST of Chy5G100750 vs. ExPASy TrEMBL
Match: A0A5A7U3P7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001510 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.3e-28
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 1  METKATDSKAVVTDQRTSSTMEMLRRPRRQRRNQAEEVQFHEKSEERRWVHRKMEDLKEK 60
          METKATDSKAVVTDQRTSSTMEMLRRPRRQRRNQAEE+QFHEKSEERR VHR MEDLKE 
Sbjct: 1  METKATDSKAVVTDQRTSSTMEMLRRPRRQRRNQAEELQFHEKSEERRSVHRNMEDLKEN 60

Query: 61 SNSVQGNADLGEVPAIAVSYSG 83
          SNSVQ NADLG+VPAIA+S SG
Sbjct: 61 SNSVQRNADLGDVPAIALSASG 82

[Close]
BLAST of Chy5G100750 vs. ExPASy TrEMBL
Match: A0A0A0LGJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034630 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.2e-12
Identity = 47/54 (87.04%), Postives = 49/54 (90.74%), Query Frame = 0 

Query: 1  METKATDSKAVVTDQRTSSTMEMLRRPRRQRRNQAEEVQFHEKSEERRWVHRKM 55
          METKATDSKAVVTDQRTSS ME LRRPRRQRRNQAEEVQFHEKSEER  + RK+
Sbjct: 1  METKATDSKAVVTDQRTSSIMEKLRRPRRQRRNQAEEVQFHEKSEERSLLLRKV 54

[Close]
BLAST of Chy5G100750 vs. NCBI nr
Match: KAA0048079.1 (hypothetical protein E6C27_scaffold385G001510 [Cucumis melo var. makuwa])

HSP 1 Score: 134 bits (336), Expect = 2.23e-38
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 1  METKATDSKAVVTDQRTSSTMEMLRRPRRQRRNQAEEVQFHEKSEERRWVHRKMEDLKEK 60
          METKATDSKAVVTDQRTSSTMEMLRRPRRQRRNQAEE+QFHEKSEERR VHR MEDLKE 
Sbjct: 1  METKATDSKAVVTDQRTSSTMEMLRRPRRQRRNQAEELQFHEKSEERRSVHRNMEDLKEN 60

Query: 61 SNSVQGNADLGEVPAIAVSYSG 82
          SNSVQ NADLG+VPAIA+S SG
Sbjct: 61 SNSVQRNADLGDVPAIALSASG 82

The following BLAST results are available for this feature:
BLAST of Chy5G100750 vs.
Match NameE-valueIdentityDescription
BLAST of Chy5G100750 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U3P76.3e-2890.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LGJ22.2e-1287.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034630 PE=4 SV=1[more]
BLAST of Chy5G100750 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0048079.12.23e-3890.24hypothetical protein E6C27_scaffold385G001510 [Cucumis melo var. makuwa][more]
BLAST of Chy5G100750 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy5G100750.1Chy5G100750.1mRNA