Chy5G100290 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G100290
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Translation initiation factor IF-3
Location	chrH05: 14529639 .. 14532519 (+)
RNA-Seq Expression	Chy5G100290
Synteny	Chy5G100290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTGCCACCACCACCACCTCCTCCGCCCCACCTGCCGCTACCTCCTCCTCTTCCACTACTCCCTTCCGAACCTCATTCCCCTCTCTTCCCATCTCCTCCTCTAATTCCAATGCCTTCAAATTCCGCCTTCACAAATCCAACTCTCTACGTCTCCTCTTTTCCTCTCCTATTCGTACTTCTGTATTCGCTCGACTCGGCGGCGCTTCTCGATCTTCCGGACCGCCTGATTCTAAGCGCTCTAACGATGAAATTGGTCTCGATATTTCCGCCATCAAGTTTGTGTCCTGTACTTGTACTTGTATGATTTATGGATTTTTTTTTTTTTTTTTTTTTTTAATTTGGAGTTCTTATTTGTTTGGTTGCGTTTTTTGTGATTTATTTGTATAGGTCAACTAATGTGAGGCTTATCGATGCTGCTCAGAATATGGTAGGTGTTTAAGTTTTTGGATGGTTTGTGCTTTGGGAAACCATATATGTGTGTGTGTGTGTGTGTTTGTCTGTTTCCTTTTGCTACAATGCAATACCTGTATGCTAGGTGTGGTAGTTTGAAACGTTCATGTTCTTATAATGAATAGGTTGGAGTTGTGTCGAAGGCCCAAGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTATGTCTTCTTGCATTGTTTGTTGTTAAAATCATTGTTTGTCTATGAATTCCAAAGAACCTTGCACCAAACTTGCATCGTTTGTTGTTAAAATCATTGTTTGTCTATGAATTCCAAAGAACCTTGCACCAAACTTTAATCTCCTTTTGAGGAAACATTGTATAGTTCATATTTCTTTTACTAAAAATGGAATTAAAAGCATATAATAATAAACTATTCGAAAAATTATAGATATAAGTTATAGCCTTTCATCCATAGCTAGAAGAACCATCGCATAGTGAATGGATTTTATTTCACAGCTGTGCATTAGGCCAATTTTACTGTTTGCTCTGATATAAAATTGTAATTTCCTTCCTTATGCCATAAACTTGCAAAGAAATCCTATTTGTCAACACGAAACTTGGATAAATGCTGGATAATGCCTTGTTATTAAGATATATGTTAAAAATTTCTTAGAACCTTTGAGTTGTCTGGATGCTCCTGGTGCAATAAACGATGCTCATTTCACATTCTGTTTTTTACTTCTTAACTTGGATAAAGAAGGTCGGGGGACTAATATTTTTCCTGGAATCCTAATATTTTCGTTGCTTTATGTAAGGTTTAGCTAATTCTTTTTATTCCGTTCAGGTTGTAGTATCTCCTGATGCAGATCCTCCAGTTGTTAGAATAATGGATTACAAGTATGCCACTTTCTCTCTCTGGTTTCCCAATTCCCTCTATACTTGTGGATAAGGTTGTATTTTGCTCGAGTTCAATGCCAATGTGATCAACTTTTATGATTAATTTCAATTCTTATGTTAAACATGTTGTGATGATATATTTTTAAATTAGTACTTTACTTTTAATTGAATGTTTCCGAAAAAGTATGGAAATATGGTGCAGTATAACGGTGACATAATGAAATAGGATGATTGTTATGTTGTTTTCACTGGGAGAATTGGAAGGCCACTTTTTTTTTTTTTCCTTACTACTATTTTGTTACTTTTATGTTGAGAATTTTCTTTTCCCGTCTTTTGTTTCTCAGTAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTGGTGAATCTCTTTTTTAATAGAGTCCGCATATTTTCTTTGGTACAAAAATCTTTCAGATTTGTGGAAAGATACTGACAAAGTGTGGTTTTGAATGTTAGCAACTCGCATGGATTTGAAAGAGCTTAAAATGGGGTAACACATTCCTTCATCTCTCTGTCTCTTTTCTCTCTGGAGGTTTCCTTTTTTTTTTCTTCTTTTTCTCGACTTAAAGCCACTTGAACTTGTGGCGTCTAAGATCAATAATCACCCAGCCTGCAAAGCAAAGAGACATGAGAGGCCTTTGTCTGCTCTTTCAGAAACATTTATGCACATGTTCCTTTTCTCAATCTCGACCTTCTGATTGTTATTATTGTTGCACAGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAAGAAATTTTTAAAAGACGGAGACAAGGTTTCTTATCAAATCTTCTATATCTTTCATCTTCTTTTCATGCATCCAGATATATCGTTATAATTTGTCTGAATCACTTTGGAAATCTTTTATCGAATATTGTAGGTTAAAGTTATAGTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGGTATTCATGTTCTATCAATTTTGTCTCGACTTCAATATCTGTTTATCATGGCAATACTAGAGAAAATGATTGCCCATTGCCCCTTATTGTGGTCTTGTTACTCAATACTACAAATAATGGTTGTTTTATAGAACCATTTTCTTAAAAGAATGCTTAGTACCTAAAACATTGTGATCATATTGCTTGTTTGTCTTGTTTTTTTCTTATTTGTGTCTGCTAATCTCTCTTTATCCCATATCCGTGCTTCGGGTTAATACCTGAAACCAACTCGATATACCTTCTCTTTATTTATCTCTCTTCCCCATTGACGTTCTCGATATTTTATTATACACAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCCCAAGAACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATGAAGTTTCTGCCGGTGTTTAA

mRNA sequence

ATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTGCCACCACCACCACCTCCTCCGCCCCACCTGCCGCTACCTCCTCCTCTTCCACTACTCCCTTCCGAACCTCATTCCCCTCTCTTCCCATCTCCTCCTCTAATTCCAATGCCTTCAAATTCCGCCTTCACAAATCCAACTCTCTACGTCTCCTCTTTTCCTCTCCTATTCGTACTTCTGTATTCGCTCGACTCGGCGGCGCTTCTCGATCTTCCGGACCGCCTGATTCTAAGCGCTCTAACGATGAAATTGGTCTCGATATTTCCGCCATCAAGTCAACTAATGTGAGGCTTATCGATGCTGCTCAGAATATGGTTGGAGTTGTGTCGAAGGCCCAAGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTAGTATCTCCTGATGCAGATCCTCCAGTTGTTAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAAGAAATTTTTAAAAGACGGAGACAAGGTTAAAGTTATAGTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCCCAAGAACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATGAAGTTTCTGCCGGTGTTTAA

Coding sequence (CDS)

ATGGCTGGGCTCTCCGGCAGTTTCCCTTTCAAATCTCTCTTATCCCAATCCTCCGCCGCTGCCACCACCACCACCTCCTCCGCCCCACCTGCCGCTACCTCCTCCTCTTCCACTACTCCCTTCCGAACCTCATTCCCCTCTCTTCCCATCTCCTCCTCTAATTCCAATGCCTTCAAATTCCGCCTTCACAAATCCAACTCTCTACGTCTCCTCTTTTCCTCTCCTATTCGTACTTCTGTATTCGCTCGACTCGGCGGCGCTTCTCGATCTTCCGGACCGCCTGATTCTAAGCGCTCTAACGATGAAATTGGTCTCGATATTTCCGCCATCAAGTCAACTAATGTGAGGCTTATCGATGCTGCTCAGAATATGGTTGGAGTTGTGTCGAAGGCCCAAGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTAGTATCTCCTGATGCAGATCCTCCAGTTGTTAGAATAATGGATTACAATAAATATAGGTATGAACTGCAAAAAAAGAAAAGAGGACAACAGAAGAAAAGTGCTGCAACTCGCATGGATTTGAAAGAGCTTAAAATGGGTTATAACATCGACCAACATGATTACTCTGTCCGTTTGAAAGCTGCAAAGAAATTTTTAAAAGACGGAGACAAGGTTAAAGTTATAGTGAACCTGAAAGGTCGTGAAAATGAGTTCAGAAACATAGCAATTGAGCTCATCAGACGTTTCCAGGAAGAAGTTGGGGAGCTTGCAACTGAAGAGGCCAAAAACTTCAGAGACAGGAATATATTTATTGTTCTAGTCCCTAACAAGGCTGTTCTTCAAAAGGCCCAAGAACCTCCCAAGAAAAAAGATAAACCTGCAGTTAATGAAGTTTCTGCCGGTGTTTAA

Protein sequence

MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKFRLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV*

Homology

[Close]

BLAST of Chy5G100290 vs. ExPASy Swiss-Prot
Match: Q94B52 (Translation initiation factor IF3-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IF3-4 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 8.5e-77
Identity = 154/211 (72.99%), Postives = 181/211 (85.78%), Query Frame = 0


Query: 85  GGASRSSGP--PDSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAEL 144
           GG SR  G      K S D+  LDISAI+S  VRLID  QNM+G+VSK +A++ AEDAEL
Sbjct: 64  GGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLIDDQQNMIGLVSKEEAVRRAEDAEL 123

Query: 145 DLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV 204
           DLV++SPDADPPVVR+MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSV
Sbjct: 124 DLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKT--TRMDLKELKMGYNIDQHDYSV 183

Query: 205 RLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIF 264
           R++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+F
Sbjct: 184 RMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESKNFRDRNLF 243

Query: 265 IVLVPNKAVLQKAQE-PPKKKDKPAVNEVSA 293
           IVLVPNK V++K QE PPKKK KPA ++VSA
Sbjct: 244 IVLVPNKEVIRKVQEPPPKKKKKPADDKVSA 272

[Close]

BLAST of Chy5G100290 vs. ExPASy Swiss-Prot
Match: O82234 (Translation initiation factor IF3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=IF3-2 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 7.5e-73
Identity = 165/274 (60.22%), Postives = 203/274 (74.09%), Query Frame = 0


Query: 35  SSSTTPFRTSFPSLPISSSNSNAF-------KFRLHKSN-SLRLLFSSPIR----TSVFA 94
           +SST  F   F  +  + S+ + F         RL K+  S   L  SP R    T  F 
Sbjct: 5   TSSTVGFNAVFTGITKTVSSHSLFSVDSKLCSLRLSKTELSFTNLTPSPRRAFAVTCRFG 64

Query: 95  RLGGASRSSGPPDSKRSND---EIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAED 154
             GG  R SG     R  +   +  LDIS+I+S  VRLID  QNM+G+VSK +A++MA+D
Sbjct: 65  GGGGGYRFSGDNRRGRPKEAEIDEALDISSIRSATVRLIDGQQNMLGLVSKDEAVRMADD 124

Query: 155 AELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD 214
           AELDLV++SPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHD
Sbjct: 125 AELDLVILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKKT--TRMDLKELKMGYNIDQHD 184

Query: 215 YSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDR 274
           YSVRL+AA+KFL+DGDKVKVIV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDR
Sbjct: 185 YSVRLRAAQKFLQDGDKVKVIVSMKGRENEFRNIAIELLRRFQTEIGELATEESKNFRDR 244

Query: 275 NIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA 293
           N+FI+LVPNK +++K QEPP +KK K A NE SA
Sbjct: 245 NMFIILVPNKEMIRKPQEPPTRKKKKTAENEASA 276

[Close]

BLAST of Chy5G100290 vs. ExPASy Swiss-Prot
Match: B0JKQ1 (Translation initiation factor IF-3 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=infC PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.2e-30
Identity = 72/176 (40.91%), Postives = 117/176 (66.48%), Query Frame = 0


Query: 95  DSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPP 154
           D +R+  ++      I+   +R+ID+  + +G+++ A+A+++AE+ ELDLV+VS  A PP
Sbjct: 3   DKRRTTRDLPQINERIRFPEIRVIDSDGSQLGIITPAEALRVAEEKELDLVLVSETASPP 62

Query: 155 VVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDG 214
           V RIMDY KY++E +KK R  +KK      D+KE+KM Y ID+HDY+VR+  A++FLK G
Sbjct: 63  VCRIMDYGKYKFEQEKKAREAKKKQHTA--DIKEVKMRYKIDEHDYNVRVNQAQRFLKAG 122

Query: 215 DKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK 270
           DKVK  +  +GRE +  N+A EL+ R  +++ ++A  ++A     RN+ ++L P K
Sbjct: 123 DKVKATITFRGREIQHSNLAEELLARMAKDLQDVAEVQQAPKKEGRNMMMMLSPKK 176

[Close]

BLAST of Chy5G100290 vs. ExPASy Swiss-Prot
Match: Q8R9C2 (Translation initiation factor IF-3 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=infC PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.8e-30
Identity = 69/161 (42.86%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 110 IKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQ 169
           I+   VRLID     +G++S  +A ++A++  LDLV + P+A+PPV ++MD+ KYRYEL 
Sbjct: 21  IRDKEVRLIDQDGKQIGIMSAKEAYKIAQERHLDLVKIVPNANPPVCKLMDFGKYRYELS 80

Query: 170 KKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENE 229
           K+++  +KK     +++KE++M  NI+ HD+ V+LK+A KFLKDGDKVKV +  +GRE  
Sbjct: 81  KREKEAKKKQKI--INVKEIRMSPNIEDHDFGVKLKSAIKFLKDGDKVKVTIRFRGREAA 140

Query: 230 FRNIAIELIRRFQEEVGELA-TEEAKNFRDRNIFIVLVPNK 270
             ++A +L++RF EE+ E    E+A +   RN+ +V+ P K
Sbjct: 141 HTSLAEDLLKRFAEELREYGNVEKAPSMDGRNMMMVIAPKK 179

[Close]

BLAST of Chy5G100290 vs. ExPASy Swiss-Prot
Match: Q0IDZ5 (Translation initiation factor IF-3 OS=Synechococcus sp. (strain CC9311) OX=64471 GN=infC PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.8e-30
Identity = 80/181 (44.20%), Postives = 116/181 (64.09%), Query Frame = 0


Query: 110 IKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQ 169
           I    +R++DA    +GV+ + QA+++A + ELDLV+VS  ADPPV RIMDY K+++E +
Sbjct: 23  INYPQLRVVDADGEQLGVIDREQALEVARERELDLVLVSEKADPPVCRIMDYGKFKFEQE 82

Query: 170 KKKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENE 229
           KK +  +KKS  T  ++KE+KM Y IDQHDY VR+  A++FLK GDKVK  V  +GRE +
Sbjct: 83  KKAKEAKKKSHQT--EVKEVKMRYKIDQHDYDVRIGQAQRFLKAGDKVKCTVIFRGREIQ 142

Query: 230 FRNIAIELIRRFQEEVGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDKPAVN 289
              +A  L+RR  +++ E A  +    R+ RN+ + L P KA L K     K KD+  VN
Sbjct: 143 HTALAEVLLRRMAKDLEEPAEVQQPPKREGRNMIMFLTPRKAPLVK-----KDKDEEVVN 196

[Close]

BLAST of Chy5G100290 vs. ExPASy TrEMBL
Match: A0A0A0LH34 (Translation initiation factor IF-3 OS=Cucumis sativus OX=3659 GN=Csa_2G036070 PE=3 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 7.4e-140
Identity = 285/299 (95.32%), Postives = 286/299 (95.65%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTT-TSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFK 60
           MAGLSGSFPFKSLLSQSSAAATTT +SSA P  TSSSSTTPFRTSFPSLPISSSNSNAFK
Sbjct: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60

Query: 61  FRLHKSNSLRLLF----SSPIRTSVFARLGGASRSSGPPDSKRSNDEIGLDISAIKSTNV 120
           FRLHKSNSLRLLF    SSPIRTSVFARLGGA RSSGPPDSKRSNDEIGLDISAIKS NV
Sbjct: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120

Query: 121 RLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180
           RLIDA QNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ
Sbjct: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180

Query: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240
           QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI
Sbjct: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240

Query: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV 295
           ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Sbjct: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 299

[Close]

BLAST of Chy5G100290 vs. ExPASy TrEMBL
Match: A0A1S3BV82 (Translation initiation factor IF-3 OS=Cucumis melo OX=3656 GN=LOC103493630 PE=3 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 6.5e-136
Identity = 277/299 (92.64%), Postives = 284/299 (94.98%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSS-NSNAFK 60
           MAGLSGSFPFKSLLSQSSAA+TTT+ +A P  TSSSSTTPFRTS PSLPISSS NSNAFK
Sbjct: 1   MAGLSGSFPFKSLLSQSSAASTTTSPAAAP--TSSSSTTPFRTSTPSLPISSSFNSNAFK 60

Query: 61  FRLHKSNSLRLLF----SSPIRTSVFARLGGASRSSGPPDSKRSNDEIGLDISAIKSTNV 120
            RLHKSNSLRL+F    SSPIRTSVFARLGGA RSSGPPDSKRSNDE GLD+SAI+S NV
Sbjct: 61  LRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEFGLDVSAIRSNNV 120

Query: 121 RLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180
           RLIDA QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQ
Sbjct: 121 RLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQ 180

Query: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240
           QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI
Sbjct: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240

Query: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV 295
           ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
Sbjct: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV 297

[Close]

BLAST of Chy5G100290 vs. ExPASy TrEMBL
Match: A0A6J1DYM5 (Translation initiation factor IF-3 OS=Momordica charantia OX=3673 GN=LOC111024717 PE=3 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 3.3e-124
Identity = 247/294 (84.01%), Postives = 269/294 (91.50%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKF 60
           MAGL+  FPFK LLSQSSA   TT+S+A  +++S+++  PFRTS   LP+SSS SNAF F
Sbjct: 1   MAGLTSRFPFKPLLSQSSA---TTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGF 60

Query: 61  RLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSNDEIGLDISAIKSTNVRLIDA 120
           RLH SNSLRL+ SSPIR SVFAR GGA RSSGP DSKRS+D+ GLD+SAI+S NVRLIDA
Sbjct: 61  RLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDA 120

Query: 121 AQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA 180
            QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
Sbjct: 121 QQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA 180

Query: 181 ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 240
           ATRMDLKELKMGYNIDQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRR
Sbjct: 181 ATRMDLKELKMGYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 240

Query: 241 FQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV 295
           FQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Sbjct: 241 FQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 291

[Close]

BLAST of Chy5G100290 vs. ExPASy TrEMBL
Match: A0A6J1KDY9 (Translation initiation factor IF-3 OS=Cucurbita maxima OX=3661 GN=LOC111493999 PE=3 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 7.4e-116
Identity = 239/295 (81.02%), Postives = 258/295 (87.46%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKF 60
           MAGLSG FPFKS+ SQSSA AT TTS       SSSS TPFRTS   LP  SS SNA +F
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATTS-------SSSSATPFRTSIFPLPFPSSKSNAVRF 60

Query: 61  RLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSNDEIGLDISAIKSTNVRLIDA 120
           RLH SNSLRL+ SSPIRTSVFAR GGA RSSGP  SKRS D + LD+S+I+S NVRLID 
Sbjct: 61  RLHSSNSLRLV-SSPIRTSVFARYGGAPRSSGPTGSKRSEDSLALDVSSIRSNNVRLIDE 120

Query: 121 AQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA 180
            QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR QQKKSA
Sbjct: 121 QQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSA 180

Query: 181 ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 240
           ATRMDLKELKMGY IDQHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++R
Sbjct: 181 ATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKR 240

Query: 241 FQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV 295
           FQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSAGV
Sbjct: 241 FQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSAGV 287

[Close]

BLAST of Chy5G100290 vs. ExPASy TrEMBL
Match: A0A6J1G3Y5 (Translation initiation factor IF-3 OS=Cucurbita moschata OX=3662 GN=LOC111450575 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 9.7e-116
Identity = 238/295 (80.68%), Postives = 261/295 (88.47%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKF 60
           MAGLSG FPFKS+ SQSSA AT TT++     +SSSS TPFRTS   LP+ SS SNAF+F
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATTTT-----SSSSSATPFRTSIFPLPLPSSKSNAFRF 60

Query: 61  RLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSNDEIGLDISAIKSTNVRLIDA 120
           RLH SNSLRL+ SSPIRTSVFAR GGA RSSGP  SKRS D + LD+S+I+S NVRLID 
Sbjct: 61  RLHNSNSLRLV-SSPIRTSVFARYGGAPRSSGPAGSKRSEDSLALDVSSIRSNNVRLIDE 120

Query: 121 AQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA 180
            QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR QQKKSA
Sbjct: 121 QQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSA 180

Query: 181 ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 240
           ATRMDLKELKMGY IDQHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++R
Sbjct: 181 ATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKR 240

Query: 241 FQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKP-AVNEVSAGV 295
           FQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKP AVNEVSA V
Sbjct: 241 FQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARV 289

[Close]

BLAST of Chy5G100290 vs. NCBI nr
Match: XP_004144726.1 (translation initiation factor IF3-4, chloroplastic [Cucumis sativus] >KGN61058.1 hypothetical protein Csa_021304 [Cucumis sativus])

HSP 1 Score: 507 bits (1305), Expect = 1.30e-179
Identity = 285/299 (95.32%), Postives = 286/299 (95.65%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTTSS-APPAATSSSSTTPFRTSFPSLPISSSNSNAFK 60
           MAGLSGSFPFKSLLSQSSAAATTT+SS A P  TSSSSTTPFRTSFPSLPISSSNSNAFK
Sbjct: 1   MAGLSGSFPFKSLLSQSSAAATTTSSSSAAPPPTSSSSTTPFRTSFPSLPISSSNSNAFK 60

Query: 61  FRLHKSNSLRLLFSSP----IRTSVFARLGGASRSSGPPDSKRSNDEIGLDISAIKSTNV 120
           FRLHKSNSLRLLFSSP    IRTSVFARLGGA RSSGPPDSKRSNDEIGLDISAIKS NV
Sbjct: 61  FRLHKSNSLRLLFSSPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINV 120

Query: 121 RLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180
           RLIDA QNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ
Sbjct: 121 RLIDAEQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180

Query: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240
           QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI
Sbjct: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240

Query: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV 294
           ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVN VSA V
Sbjct: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 299

[Close]

BLAST of Chy5G100290 vs. NCBI nr
Match: XP_008452687.1 (PREDICTED: translation initiation factor IF-3 [Cucumis melo])

HSP 1 Score: 494 bits (1271), Expect = 1.83e-174
Identity = 277/299 (92.64%), Postives = 284/299 (94.98%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSS-NSNAFK 60
           MAGLSGSFPFKSLLSQSSAA+TTT+ +A P  TSSSSTTPFRTS PSLPISSS NSNAFK
Sbjct: 1   MAGLSGSFPFKSLLSQSSAASTTTSPAAAP--TSSSSTTPFRTSTPSLPISSSFNSNAFK 60

Query: 61  FRLHKSNSLRLLFS----SPIRTSVFARLGGASRSSGPPDSKRSNDEIGLDISAIKSTNV 120
            RLHKSNSLRL+FS    SPIRTSVFARLGGA RSSGPPDSKRSNDE GLD+SAI+S NV
Sbjct: 61  LRLHKSNSLRLVFSFPVSSPIRTSVFARLGGAPRSSGPPDSKRSNDEFGLDVSAIRSNNV 120

Query: 121 RLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQ 180
           RLIDA QNMVGVVSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQ
Sbjct: 121 RLIDAQQNMVGVVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQ 180

Query: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240
           QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI
Sbjct: 181 QKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAI 240

Query: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV 294
           ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV
Sbjct: 241 ELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV 297

[Close]

BLAST of Chy5G100290 vs. NCBI nr
Match: XP_038891171.1 (translation initiation factor IF3-4, chloroplastic [Benincasa hispida])

HSP 1 Score: 459 bits (1181), Expect = 8.65e-161
Identity = 260/299 (86.96%), Postives = 274/299 (91.64%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKF 60
           MAGLSG FPFK LLSQS+ A  TTTS+A  AATSSSS TPFRTS   LP+SSS +NAFKF
Sbjct: 1   MAGLSGRFPFKPLLSQSTTA--TTTSAA--AATSSSSATPFRTSIRPLPLSSSKANAFKF 60

Query: 61  RLHKSNSLRLLFS----SPIRTSVFARLGGASRSSGPPDSKRSNDEIGLDISAIKSTNVR 120
           RL KSNSLRL+ S    SPIRTSVF+R GGA RSSGP DSKRS+DE GLD+SAI+S NVR
Sbjct: 61  RLRKSNSLRLVVSFPVSSPIRTSVFSRYGGAPRSSGPADSKRSDDEFGLDVSAIRSNNVR 120

Query: 121 LIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQ 180
           LIDA QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQ
Sbjct: 121 LIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQ 180

Query: 181 KKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIE 240
           KKSAATRMDLKELKMGYNIDQHDYSVRL+AA+KFLKDGDKVKVIVNLKGRENEFRNIAIE
Sbjct: 181 KKSAATRMDLKELKMGYNIDQHDYSVRLRAAQKFLKDGDKVKVIVNLKGRENEFRNIAIE 240

Query: 241 LIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDKPAVNEVSAGV 294
           LIRRFQEE+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKDKPAVNEVSAGV
Sbjct: 241 LIRRFQEEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEQPPKKKDKPAVNEVSAGV 295

[Close]

BLAST of Chy5G100290 vs. NCBI nr
Match: XP_022158178.1 (translation initiation factor IF3-4, chloroplastic [Momordica charantia] >XP_022158179.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia])

HSP 1 Score: 455 bits (1170), Expect = 3.54e-159
Identity = 247/294 (84.01%), Postives = 269/294 (91.50%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKF 60
           MAGL+  FPFK LLSQSSA   TT+S+A  +++S+++  PFRTS   LP+SSS SNAF F
Sbjct: 1   MAGLTSRFPFKPLLSQSSA---TTSSAAASSSSSAAAAPPFRTSISPLPLSSSESNAFGF 60

Query: 61  RLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSNDEIGLDISAIKSTNVRLIDA 120
           RLH SNSLRL+ SSPIR SVFAR GGA RSSGP DSKRS+D+ GLD+SAI+S NVRLIDA
Sbjct: 61  RLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRSNNVRLIDA 120

Query: 121 AQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA 180
            QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA
Sbjct: 121 QQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA 180

Query: 181 ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 240
           ATRMDLKELKMGYNIDQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRR
Sbjct: 181 ATRMDLKELKMGYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 240

Query: 241 FQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPAVNEVSAGV 294
           FQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Sbjct: 241 FQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV 291

[Close]

BLAST of Chy5G100290 vs. NCBI nr
Match: KAG6599141.1 (Translation initiation factor IF3-2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 429 bits (1104), Expect = 6.50e-149
Identity = 237/295 (80.34%), Postives = 263/295 (89.15%), Query Frame = 0


Query: 1   MAGLSGSFPFKSLLSQSSAAATTTTSSAPPAATSSSSTTPFRTSFPSLPISSSNSNAFKF 60
           MAGLSG FPFKS+ SQSSA AT TT+++  +++SSSS TPFRTS   LP+ SS SNAF+F
Sbjct: 1   MAGLSGRFPFKSISSQSSATATATTTTSSSSSSSSSSATPFRTSIFPLPLPSSKSNAFRF 60

Query: 61  RLHKSNSLRLLFSSPIRTSVFARLGGASRSSGPPDSKRSNDEIGLDISAIKSTNVRLIDA 120
           RLH SNSLRL+ SSPIRTSVFAR GGA RSSGP  SK S D + LD+S+I+S NVRLID 
Sbjct: 61  RLHNSNSLRLV-SSPIRTSVFARYGGAPRSSGPAGSKHSEDSLALDVSSIRSNNVRLIDE 120

Query: 121 AQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSA 180
            QNMVG+V K+QAIQMAEDAELDLVV+SPDADPPVVRIMDY+KYRY+LQKKKR QQKKSA
Sbjct: 121 QQNMVGIVPKSQAIQMAEDAELDLVVLSPDADPPVVRIMDYSKYRYDLQKKKREQQKKSA 180

Query: 181 ATRMDLKELKMGYNIDQHDYSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRR 240
           ATRMDLKELKMGY IDQHDYSVRL+AAKKFL+DGDKVKVIVNLKGRENEFR IAIEL++R
Sbjct: 181 ATRMDLKELKMGYKIDQHDYSVRLRAAKKFLQDGDKVKVIVNLKGRENEFRKIAIELVKR 240

Query: 241 FQEEVGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDKPA-VNEVSAGV 294
           FQEE+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKDKPA VNEVSA V
Sbjct: 241 FQEELGELATEEAKNFRDRNVFIVLAPNKAVLQKSQEPPKKKDKPAAVNEVSARV 294

[Close]

BLAST of Chy5G100290 vs. TAIR 10
Match: AT4G30690.1 (Translation initiation factor 3 protein )

HSP 1 Score: 288.5 bits (737), Expect = 6.1e-78
Identity = 154/211 (72.99%), Postives = 181/211 (85.78%), Query Frame = 0


Query: 85  GGASRSSGP--PDSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAEL 144
           GG SR  G      K S D+  LDISAI+S  VRLID  QNM+G+VSK +A++ AEDAEL
Sbjct: 64  GGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLIDDQQNMIGLVSKEEAVRRAEDAEL 123

Query: 145 DLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV 204
           DLV++SPDADPPVVR+MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHDYSV
Sbjct: 124 DLVILSPDADPPVVRMMDYSKYRYEQQKRKKEQQKKT--TRMDLKELKMGYNIDQHDYSV 183

Query: 205 RLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIF 264
           R++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+F
Sbjct: 184 RMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESKNFRDRNLF 243

Query: 265 IVLVPNKAVLQKAQE-PPKKKDKPAVNEVSA 293
           IVLVPNK V++K QE PPKKK KPA ++VSA
Sbjct: 244 IVLVPNKEVIRKVQEPPPKKKKKPADDKVSA 272

[Close]

BLAST of Chy5G100290 vs. TAIR 10
Match: AT2G24060.1 (Translation initiation factor 3 protein )

HSP 1 Score: 275.4 bits (703), Expect = 5.3e-74
Identity = 165/274 (60.22%), Postives = 203/274 (74.09%), Query Frame = 0


Query: 35  SSSTTPFRTSFPSLPISSSNSNAF-------KFRLHKSN-SLRLLFSSPIR----TSVFA 94
           +SST  F   F  +  + S+ + F         RL K+  S   L  SP R    T  F 
Sbjct: 5   TSSTVGFNAVFTGITKTVSSHSLFSVDSKLCSLRLSKTELSFTNLTPSPRRAFAVTCRFG 64

Query: 95  RLGGASRSSGPPDSKRSND---EIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAED 154
             GG  R SG     R  +   +  LDIS+I+S  VRLID  QNM+G+VSK +A++MA+D
Sbjct: 65  GGGGGYRFSGDNRRGRPKEAEIDEALDISSIRSATVRLIDGQQNMLGLVSKDEAVRMADD 124

Query: 155 AELDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHD 214
           AELDLV++SPDADPPVV++MDY+KYRYE QK+K+ QQKK+  TRMDLKELKMGYNIDQHD
Sbjct: 125 AELDLVILSPDADPPVVKMMDYSKYRYEQQKRKKDQQKKT--TRMDLKELKMGYNIDQHD 184

Query: 215 YSVRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDR 274
           YSVRL+AA+KFL+DGDKVKVIV++KGRENEFRNIAIEL+RRFQ E+GELATEE+KNFRDR
Sbjct: 185 YSVRLRAAQKFLQDGDKVKVIVSMKGRENEFRNIAIELLRRFQTEIGELATEESKNFRDR 244

Query: 275 NIFIVLVPNKAVLQKAQEPP-KKKDKPAVNEVSA 293
           N+FI+LVPNK +++K QEPP +KK K A NE SA
Sbjct: 245 NMFIILVPNKEMIRKPQEPPTRKKKKTAENEASA 276

[Close]

BLAST of Chy5G100290 vs. TAIR 10
Match: AT4G30690.2 (Translation initiation factor 3 protein )

HSP 1 Score: 235.3 bits (599), Expect = 6.1e-62
Identity = 131/211 (62.09%), Postives = 155/211 (73.46%), Query Frame = 0


Query: 85  GGASRSSGP--PDSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAEL 144
           GG SR  G      K S D+  LDISAI+S  VRLID  QNM+G+VSK +A++ AEDAEL
Sbjct: 64  GGGSRFPGDRRGRQKESEDDDSLDISAIRSATVRLIDDQQNMIGLVSKEEAVRRAEDAEL 123

Query: 145 DLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYSV 204
           DLV++SPDADPPVVR+MDY+                              YNIDQHDYSV
Sbjct: 124 DLVILSPDADPPVVRMMDYS------------------------------YNIDQHDYSV 183

Query: 205 RLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNIF 264
           R++AA+KFL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ E+GEL TEE+KNFRDRN+F
Sbjct: 184 RMRAARKFLQDGDKVKVIVNMKGRENEFRNIAIELLRRFQTEIGELGTEESKNFRDRNLF 243

Query: 265 IVLVPNKAVLQKAQE-PPKKKDKPAVNEVSA 293
           IVLVPNK V++K QE PPKKK KPA ++VSA
Sbjct: 244 IVLVPNKEVIRKVQEPPPKKKKKPADDKVSA 244

[Close]

BLAST of Chy5G100290 vs. TAIR 10
Match: AT1G34360.1 (translation initiation factor 3 (IF-3) family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-07
Identity = 59/191 (30.89%), Postives = 95/191 (49.74%), Query Frame = 0


Query: 95  DSKRSNDEIGLDISAIKSTNVRLIDAAQNMVGVVSKAQAIQMAEDAELDLVVVSPDADPP 154
           D  R N++I  D        VRL+    +   VVS  +A++ A++ + DLV V  DA PP
Sbjct: 82  DGPRLNEKITGDY-------VRLVSEEGHC--VVSLREALRRAKELQCDLVEVQRDAKPP 141

Query: 155 VVRIMDYNKYRYELQK--KKRGQQKKSAATRMDLKELKMGYNIDQHDYSVRLKAAKKFLK 214
           V +I+ Y+   Y+  K  K+R + K++ A R D+KE++    I+  D   +   A K ++
Sbjct: 142 VCKIVKYSLELYKKAKVGKERAKAKRAEAIRPDIKEIRFTPKIEAKDLKFKSDQALKLME 201

Query: 215 DGDKVKVI-VNLKGRENEFR-NIAIELIRRFQEEVGELATEEAKNFRDRNIFIVLVPNKA 274
            G +VK + V  K +  E      +EL+ RF   +G+ A  E+    DR   +V+V +  
Sbjct: 202 SGYRVKCLAVPDKDKHKELEPEKLLELLFRFTCFIGD-ALVESWPEADRKGAVVIVRHAK 257

Query: 275 VLQKAQEPPKK 282
                  PPKK
Sbjct: 262 F-----GPPKK 257

The following BLAST results are available for this feature:

BLAST of Chy5G100290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94B52	8.5e-77	72.99	Translation initiation factor IF3-4, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
O82234	7.5e-73	60.22	Translation initiation factor IF3-2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
B0JKQ1	1.2e-30	40.91	Translation initiation factor IF-3 OS=Microcystis aeruginosa (strain NIES-843) O...	[more]
Q8R9C2	7.8e-30	42.86	Translation initiation factor IF-3 OS=Caldanaerobacter subterraneus subsp. tengc...	[more]
Q0IDZ5	7.8e-30	44.20	Translation initiation factor IF-3 OS=Synechococcus sp. (strain CC9311) OX=64471...	[more]

BLAST of Chy5G100290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LH34	7.4e-140	95.32	Translation initiation factor IF-3 OS=Cucumis sativus OX=3659 GN=Csa_2G036070 PE...	[more]
A0A1S3BV82	6.5e-136	92.64	Translation initiation factor IF-3 OS=Cucumis melo OX=3656 GN=LOC103493630 PE=3 ...	[more]
A0A6J1DYM5	3.3e-124	84.01	Translation initiation factor IF-3 OS=Momordica charantia OX=3673 GN=LOC11102471...	[more]
A0A6J1KDY9	7.4e-116	81.02	Translation initiation factor IF-3 OS=Cucurbita maxima OX=3661 GN=LOC111493999 P...	[more]
A0A6J1G3Y5	9.7e-116	80.68	Translation initiation factor IF-3 OS=Cucurbita moschata OX=3662 GN=LOC111450575...	[more]

BLAST of Chy5G100290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144726.1	1.30e-179	95.32	translation initiation factor IF3-4, chloroplastic [Cucumis sativus] >KGN61058.1...	[more]
XP_008452687.1	1.83e-174	92.64	PREDICTED: translation initiation factor IF-3 [Cucumis melo]	[more]
XP_038891171.1	8.65e-161	86.96	translation initiation factor IF3-4, chloroplastic [Benincasa hispida]	[more]
XP_022158178.1	3.54e-159	84.01	translation initiation factor IF3-4, chloroplastic [Momordica charantia] >XP_022...	[more]
KAG6599141.1	6.50e-149	80.34	Translation initiation factor IF3-2, chloroplastic, partial [Cucurbita argyrospe...	[more]

BLAST of Chy5G100290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30690.1	6.1e-78	72.99	Translation initiation factor 3 protein	[more]
AT2G24060.1	5.3e-74	60.22	Translation initiation factor 3 protein	[more]
AT4G30690.2	6.1e-62	62.09	Translation initiation factor 3 protein	[more]
AT1G34360.1	1.1e-07	30.89	translation initiation factor 3 (IF-3) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019815	Translation initiation factor 3, C-terminal	PFAM	PF00707	IF3_C	coord: 185..268 e-value: 4.3E-23 score: 81.1
IPR001288	Translation initiation factor 3	TIGRFAM	TIGR00168	TIGR00168	coord: 109..269 e-value: 2.8E-47 score: 158.4
IPR001288	Translation initiation factor 3	PANTHER	PTHR10938	TRANSLATION INITIATION FACTOR IF-3	coord: 60..287
IPR001288	Translation initiation factor 3	HAMAP	MF_00080	IF_3	coord: 87..270 score: 22.6852
IPR036788	Translation initiation factor 3 (IF-3), C-terminal domain superfamily	GENE3D	3.30.110.10		coord: 174..270 e-value: 1.7E-23 score: 84.4
IPR036788	Translation initiation factor 3 (IF-3), C-terminal domain superfamily	SUPERFAMILY	55200	Translation initiation factor IF3, C-terminal domain	coord: 184..269
IPR036787	Translation initiation factor 3 (IF-3), N-terminal domain superfamily	GENE3D	3.10.20.80		coord: 108..173 e-value: 3.7E-27 score: 96.2
IPR036787	Translation initiation factor 3 (IF-3), N-terminal domain superfamily	SUPERFAMILY	54364	Translation initiation factor IF3, N-terminal domain	coord: 109..177
IPR019814	Translation initiation factor 3, N-terminal	PFAM	PF05198	IF3_N	coord: 109..173 e-value: 1.5E-25 score: 89.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 274..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..41
None	No IPR available	PANTHER	PTHR10938:SF3	TRANSLATION INITIATION FACTOR IF3-2, CHLOROPLASTIC	coord: 60..287
IPR019813	Translation initiation factor 3, conserved site	PROSITE	PS00938	IF3	coord: 157..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G100290.1	Chy5G100290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032790	ribosome disassembly
biological_process	GO:0006413	translational initiation
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0043022	ribosome binding
molecular_function	GO:0003743	translation initiation factor activity