Chy5G099840 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTCCTAGAGGTAAAGCAGAAACTCATGAGCGAGGTTGAAGCTCTAGGATTCCCTAGGGCTCGAGTCGTTCGAGCACTTCATAGTACTGGTGAGGATGATTGACTGACACTTATTGCCTGAGAATATCAATGTATAATAATGCTATGATTTGTTTTGTAACAAAATATTTTGGTTTTTCAAACGGATGATCCAAAATGAAATGTCCCACCTTTTAAAACTCTGTTTTTTTACCATTTACTTATGTCGTATGAACGTGAGATTGCTAAAACTGGCCATTGTGCATGCTGATTAGGATCTTGCTCACTTGTTCCTCTTGCTTCTTTGGGTTTTGGTTTTCGGCTCATTACTCTCTCTATTTTCTCTCACTCTCCCTCTTGTGAGTTCTGAGACTCGTTGATCTCGCTTCTCTCTTGCTCCTTTGGGTTTGGATATTTTGCTCCTCAACCTCCTGATCTCTTATTCTTGCTCTTTAATCTATAGTAGCAGGAACCCCGTACACACACAGTAAAGTCGTATTGTTAATTGTTTGGACAATAAACCCCTGAATATCTCCACAATGGTATGATATTGTCCACTTTAAGTATACACCCTCATGGCTTTGCTTTTGGTATCATCCCAAATGGCCTCATACCAATAGAGATAGTTGTTATCACATATATATCCAAAAACCCCGTACACACACAATAAAGTCGTTTTGGTAATTTCCACGGATAATGATGCAAGCAAAAGGTTAAAAAAACTTCAGTTATATAAAGTGTGGAATATCTTAGTTTGGACCCAAAATTTGTTTCGAGTACAATTATCTCAAAATATGTGATTCATATTGATTAATGTACACATCTCTTGTTTCTTTTTCCAGTCCTACTTCTTCAGTTGTAGGAACCATTTCACTCTTTTCACTTTTTGAATGAGTGTGAATGGTAAATAAACATTCGAGAATGAAAAACAACTCTTCATTTAATTTTCGAATACAAATGTACATCTAAAGATTGATGAAAGAGGACTGAGATCTCCTCATTTACAACATCGCCTATTCCATCTTTCACTACAATTTAGAGTTAGAATAATTGAATTATCTACTGTTTTTCATTCTTAGAAACTTCTTTCTTTGTTCTTCAGGCAACGTCAGCTCTGAAGCTGCAGTTCATTGGCTCATTGATCATGAGAATGATCCCGATATTGATCAAATGCCCCCGGTAAATTCTATATTTATAAAGCTCTCTTCATTACATTCCATTTATTCAGTTAGATCTCTAGATAGATTCCATGTATTTGTTATGGTCAAATATCATTGCAATTAAGTATCAATGCCAAACTCTTGTAAACTAGCTCTAAAAGACTATAAATCAGGATTTTTGCTATTAAAAGTGGTGGATAGAGTGAATTTGAGTTTCACTGATAGATATAACTAAGGAATTTCATGCAGGTAGCAGTTAACATTGATATTGAATCTTCTGAACCATTTCATATCACAGAGGAAATGAGAAGAAAAGCTAAGGAACTAAGGTATGGTATCAGATTTTGTTTATTGTGAAAGACTTGAATGCTTTACACTTTTTTTTCACAATAAAAAAAATAAAATTAATCACTATGCCATTTTATTTCACTCTAGAGCCATCTTAAACTTGGAGTTGTTTAGTCCAAAGGTGTCTTAATATTAAATCTTTGTTGATTTTCCTATGTTTAGGGATCAAGTAGGGAAAGAGAAGGAAAAAGAAGACAAAAAGTTTGAAAGACAAAGGGAAAAGGTACCGTGTTCGAATCATTGGTTTGTCAATCTTATTCTGTTTAACTAGTTGAAGATTATTTTGTTTAAATGAAGTAAATTAGCAAGGGTTACATATCAATGAAACTGGTAGATGAAGTAAATTGAGCATTGATAATGCAATTGCCAGAAATTTACCATTTATATGTGTAATACTAGATGCTATACTATGTATCTTGCCATCGTGTTGCTAATCACTTCACCATTTGGGAACAAGTTTTGTAGTAGTGGGTAAAAAAATTTAAGCATTTACCACTTGGTATACCCTCCAATCTCCAATCATGAGTATATATTTTGATTTTGGTTTCATATGTTGGATTGGATCTGATGCTATCTGTAAGCTTAACTGTATGTTAATTTTCATGATCTAATGCTTGCAATTTTTAAAGGATAGAATCCGTTCCAGTAAAGAACTACAAGAAGCAAAAAGAATCTCTGAAGAAATTGAAAGGAAACGGTATGTCTTCTTTATCAATCACTTTTTTGGTTTTCTTCTCTGTCACTGAAAGCATTTTTGCTTTCTGTCTGAAGTGAAATATGTTTTTTTCTTTGCTCAGCAATATTAATTCTAGGCAAGTTGAGAAAGAGGAGGAGAGAAGAGCAAGGGAAAAAGTTGTACAAAAAATTGAACAAGATAAGGTTTGCTTTCTCCACTATTTTTTTTTAGTTTTGTATTAATCAATAATGTATTTTAACTGAGTGAGATACATTTTGACGGTTATTTCATTTTCATTCTCATGATTCCCAAGGATTTATAACTAAGCATCCCTGAAGTTTTAATTATGTATCTAATTAGTCCTTGAATTTTATGAAGTGTTCAAAAGGCTGCTAAACTTTTGATCTTTCAATTTTGTGTCTATTAGATCCTTGAACTATTTAGCAATTTTTAAAATTCAGAAATCTATTAACCACGTAATTGAAAGTTTAACAATCTATTAGATGCAAAATTCAATTTTATGTATAATAGATTCGTTTATCGTAAATCCTAGATAAATATCACTGAGGCATTAGCATATATTTTATAACCACAGCTATAGCATATACCTGTTGCAAGAAGGTTATAAATTTATTGCTTCTTTGAGCTAAGAGAACTGCATTTATGGGTAAAATTGAAAATACAAAATGGTTAAAGAACGGCACAAACTAAAACCAAGCAGAGGAGCCTCCAAAAGAAAGAAAAAATATGCCTGGTGCAAAGAAGCTTATTAACAATAAACATGGGCTTACTGTTTTCTTTTTCTTTTTTTCCTTTTTGGATATTGAGTTATGACAAATTGTTTCCTGTCTATATCCTTCCATTATAGAATTTTTTATAAAACTTTTATCATTTTATGCACATTTGGCAGATAGAAAGAAAGAGGTTAGGTGGAATTCCCTCTGAAAGGTCTGAAAGCCTTGCTACAAAAGCGACCGCAGCCAGAGCAAGGGAAAAGGATGAACTTAGATCACAGAATTCACTGCCAGCAACTTCAGTCAGTAAAGCAGTCTCTATGAAAGAATGTTTAAGGTCTCTTAGGCACCATCATAAGGTATTGATATCTATGGAAAATGTGTGGGTCATATTTTGATGAAGCATTCTTTTTAAGTTTGTCCATGATTACTACAAAATATCACAACTGTAGTTCCACCATTCCTTCAAAAAATCCCTTGTGGCTGCCTGATAAATTTTCTTGTTCTTTTTCCTTTGAGCAATGATAGACCATATGAAAATGGAAATCCAAGAAAAAATTTCTTTCTTTAGGAGAATTTTTTATACTCGTTCCATTTTTTTGTGTCGCATCTCACAAATGAACTGATTTTCCTTTCCTAGAAGTATATTGCTAGATTAGTATACTCCTAATTGTTCTATTTTCTGGGTTCAAGGATGATTCTGACAAAGTGAGAAATGCCTACCAAACTCTCTTCATCTATGTCAGAAATGTAGCCAAAAATCCTGATGAGGAAAGGTTTAGGAAGATTCGACTCAGTAATCCTTTGTTCCAGGTAAACTTTTTAATCCAGTATGTTGATTAGATTACAAACCTCATGGTTACAACAGCATGTAATGTAAATCTTTACGAAGTTAATATTTTACTCACAAGTCACAAATGAGGTCCAAAATTTTCTTGTAGTTTGAGCACTAATGTAAAATTAGTCTTCATAAGCATTAAGCTCATTCAAATTTATAGGTTCATATTAAGAGGACAGGAAAGCAAGAATTGATCAGTCACACAATCACGTTTTGTTTGCTCATTTTTCCTGTCCCATGTATTTTCATCATTGCAATTCGAGCTTATGAGATCCAACTAAATCTTCATTGGAAGATTAGTCTTTAGGAAGTGCAGCCGCTGTTGGAATTAGTATCACCCTCTTCTTTCACATCTATCAATCTTAAAAGCTAATTTCCAAACAAGATTATATTAATCTGTTATTGTTTCTGTACTTCAACAGGACAGAGTTGGGAGTTTGAAAGGAGGGATTGAGTTTCTCGAGCTTTGCGGCTTTCAAAAAGAAGGAGAGTTTCTATATCTTCCCCATGATGAAATCGACTCGGAGGCTTTAAACACTGCTGGATCATTGTTGAATTCTGCATTGACAAATCCCTTTTTTGGTGTTCTACAATCAGTTTGA ATGGCTTTCCTAGAGGTAAAGCAGAAACTCATGAGCGAGGTTGAAGCTCTAGGATTCCCTAGGGCTCGAGTCGTTCGAGCACTTCATAGTACTGGCAACGTCAGCTCTGAAGCTGCAGTTCATTGGCTCATTGATCATGAGAATGATCCCGATATTGATCAAATGCCCCCGGTAGCAGTTAACATTGATATTGAATCTTCTGAACCATTTCATATCACAGAGGAAATGAGAAGAAAAGCTAAGGAACTAAGGGATCAAGTAGGGAAAGAGAAGGAAAAAGAAGACAAAAAGTTTGAAAGACAAAGGGAAAAGGATAGAATCCGTTCCAGTAAAGAACTACAAGAAGCAAAAAGAATCTCTGAAGAAATTGAAAGGAAACGCAATATTAATTCTAGGCAAGTTGAGAAAGAGGAGGAGAGAAGAGCAAGGGAAAAAGTTGTACAAAAAATTGAACAAGATAAGATAGAAAGAAAGAGGTTAGGTGGAATTCCCTCTGAAAGGTCTGAAAGCCTTGCTACAAAAGCGACCGCAGCCAGAGCAAGGGAAAAGGATGAACTTAGATCACAGAATTCACTGCCAGCAACTTCAGTCAGTAAAGCAGTCTCTATGAAAGAATGTTTAAGGTCTCTTAGGCACCATCATAAGGATGATTCTGACAAAGTGAGAAATGCCTACCAAACTCTCTTCATCTATGTCAGAAATGTAGCCAAAAATCCTGATGAGGAAAGGTTTAGGAAGATTCGACTCAGTAATCCTTTGTTCCAGGACAGAGTTGGGAGTTTGAAAGGAGGGATTGAGTTTCTCGAGCTTTGCGGCTTTCAAAAAGAAGGAGAGTTTCTATATCTTCCCCATGATGAAATCGACTCGGAGGCTTTAAACACTGCTGGATCATTGTTGAATTCTGCATTGACAAATCCCTTTTTTGGTGTTCTACAATCAGTTTGA ATGGCTTTCCTAGAGGTAAAGCAGAAACTCATGAGCGAGGTTGAAGCTCTAGGATTCCCTAGGGCTCGAGTCGTTCGAGCACTTCATAGTACTGGCAACGTCAGCTCTGAAGCTGCAGTTCATTGGCTCATTGATCATGAGAATGATCCCGATATTGATCAAATGCCCCCGGTAGCAGTTAACATTGATATTGAATCTTCTGAACCATTTCATATCACAGAGGAAATGAGAAGAAAAGCTAAGGAACTAAGGGATCAAGTAGGGAAAGAGAAGGAAAAAGAAGACAAAAAGTTTGAAAGACAAAGGGAAAAGGATAGAATCCGTTCCAGTAAAGAACTACAAGAAGCAAAAAGAATCTCTGAAGAAATTGAAAGGAAACGCAATATTAATTCTAGGCAAGTTGAGAAAGAGGAGGAGAGAAGAGCAAGGGAAAAAGTTGTACAAAAAATTGAACAAGATAAGATAGAAAGAAAGAGGTTAGGTGGAATTCCCTCTGAAAGGTCTGAAAGCCTTGCTACAAAAGCGACCGCAGCCAGAGCAAGGGAAAAGGATGAACTTAGATCACAGAATTCACTGCCAGCAACTTCAGTCAGTAAAGCAGTCTCTATGAAAGAATGTTTAAGGTCTCTTAGGCACCATCATAAGGATGATTCTGACAAAGTGAGAAATGCCTACCAAACTCTCTTCATCTATGTCAGAAATGTAGCCAAAAATCCTGATGAGGAAAGGTTTAGGAAGATTCGACTCAGTAATCCTTTGTTCCAGGACAGAGTTGGGAGTTTGAAAGGAGGGATTGAGTTTCTCGAGCTTTGCGGCTTTCAAAAAGAAGGAGAGTTTCTATATCTTCCCCATGATGAAATCGACTCGGAGGCTTTAAACACTGCTGGATCATTGTTGAATTCTGCATTGACAAATCCCTTTTTTGGTGTTCTACAATCAGTTTGA MAFLEVKQKLMSEVEALGFPRARVVRALHSTGNVSSEAAVHWLIDHENDPDIDQMPPVAVNIDIESSEPFHITEEMRRKAKELRDQVGKEKEKEDKKFERQREKDRIRSSKELQEAKRISEEIERKRNINSRQVEKEEERRAREKVVQKIEQDKIERKRLGGIPSERSESLATKATAARAREKDELRSQNSLPATSVSKAVSMKECLRSLRHHHKDDSDKVRNAYQTLFIYVRNVAKNPDEERFRKIRLSNPLFQDRVGSLKGGIEFLELCGFQKEGEFLYLPHDEIDSEALNTAGSLLNSALTNPFFGVLQSV* Homology
BLAST of Chy5G099840 vs. ExPASy Swiss-Prot
Match: Q922Y1 (UBX domain-containing protein 1 OS=Mus musculus OX=10090 GN=Ubxn1 PE=1 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.4e-13 Identity = 83/264 (31.44%), Postives = 127/264 (48.11%), Query Frame = 0
BLAST of Chy5G099840 vs. ExPASy Swiss-Prot
Match: Q499N6 (UBX domain-containing protein 1 OS=Rattus norvegicus OX=10116 GN=Ubxn1 PE=3 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 4.2e-13 Identity = 82/264 (31.06%), Postives = 129/264 (48.86%), Query Frame = 0
BLAST of Chy5G099840 vs. ExPASy Swiss-Prot
Match: Q32KW2 (UBX domain-containing protein 1 OS=Bos taurus OX=9913 GN=UBXN1 PE=2 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 6.0e-12 Identity = 81/270 (30.00%), Postives = 128/270 (47.41%), Query Frame = 0
BLAST of Chy5G099840 vs. ExPASy Swiss-Prot
Match: Q04323 (UBX domain-containing protein 1 OS=Homo sapiens OX=9606 GN=UBXN1 PE=1 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 1.0e-11 Identity = 83/270 (30.74%), Postives = 132/270 (48.89%), Query Frame = 0
BLAST of Chy5G099840 vs. ExPASy Swiss-Prot
Match: Q6GL77 (UBX domain-containing protein 1 OS=Xenopus tropicalis OX=8364 GN=ubxn1 PE=2 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.5e-10 Identity = 74/225 (32.89%), Postives = 120/225 (53.33%), Query Frame = 0
BLAST of Chy5G099840 vs. ExPASy TrEMBL
Match: A0A0A0LMA0 (UBA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G049850 PE=4 SV=1) HSP 1 Score: 550.1 bits (1416), Expect = 6.2e-153 Identity = 297/314 (94.59%), Postives = 307/314 (97.77%), Query Frame = 0
BLAST of Chy5G099840 vs. ExPASy TrEMBL
Match: A0A1S3BU48 (UBX domain-containing protein 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493298 PE=4 SV=1) HSP 1 Score: 543.9 bits (1400), Expect = 4.5e-151 Identity = 291/314 (92.68%), Postives = 302/314 (96.18%), Query Frame = 0
BLAST of Chy5G099840 vs. ExPASy TrEMBL
Match: A0A6J1ESJ7 (UBX domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111436126 PE=4 SV=1) HSP 1 Score: 468.4 bits (1204), Expect = 2.4e-128 Identity = 249/311 (80.06%), Postives = 280/311 (90.03%), Query Frame = 0
BLAST of Chy5G099840 vs. ExPASy TrEMBL
Match: A0A6J1K522 (UBX domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492361 PE=4 SV=1) HSP 1 Score: 463.8 bits (1192), Expect = 5.9e-127 Identity = 247/311 (79.42%), Postives = 280/311 (90.03%), Query Frame = 0
BLAST of Chy5G099840 vs. ExPASy TrEMBL
Match: A0A6J1DKF8 (uncharacterized protein LOC111020886 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111020886 PE=4 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 7.4e-122 Identity = 241/314 (76.75%), Postives = 275/314 (87.58%), Query Frame = 0
BLAST of Chy5G099840 vs. NCBI nr
Match: XP_004149073.1 (UBX domain-containing protein 1 [Cucumis sativus] >XP_011648913.1 UBX domain-containing protein 1 [Cucumis sativus] >XP_011648914.1 UBX domain-containing protein 1 [Cucumis sativus] >KAE8651652.1 hypothetical protein Csa_021282 [Cucumis sativus]) HSP 1 Score: 551 bits (1419), Expect = 2.07e-196 Identity = 297/314 (94.59%), Postives = 307/314 (97.77%), Query Frame = 0
BLAST of Chy5G099840 vs. NCBI nr
Match: XP_008452212.1 (PREDICTED: UBX domain-containing protein 1-like isoform X1 [Cucumis melo] >XP_008452221.1 PREDICTED: UBX domain-containing protein 1-like isoform X1 [Cucumis melo] >XP_008452230.1 PREDICTED: UBX domain-containing protein 1-like isoform X1 [Cucumis melo] >XP_008452239.1 PREDICTED: UBX domain-containing protein 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 545 bits (1403), Expect = 5.88e-194 Identity = 291/314 (92.68%), Postives = 302/314 (96.18%), Query Frame = 0
BLAST of Chy5G099840 vs. NCBI nr
Match: XP_038890985.1 (UBX domain-containing protein 1-like [Benincasa hispida] >XP_038890986.1 UBX domain-containing protein 1-like [Benincasa hispida] >XP_038890987.1 UBX domain-containing protein 1-like [Benincasa hispida]) HSP 1 Score: 488 bits (1256), Expect = 1.29e-171 Identity = 260/311 (83.60%), Postives = 289/311 (92.93%), Query Frame = 0
BLAST of Chy5G099840 vs. NCBI nr
Match: XP_022929583.1 (UBX domain-containing protein 1-like [Cucurbita moschata] >XP_022929584.1 UBX domain-containing protein 1-like [Cucurbita moschata] >XP_022929585.1 UBX domain-containing protein 1-like [Cucurbita moschata] >XP_022929586.1 UBX domain-containing protein 1-like [Cucurbita moschata]) HSP 1 Score: 469 bits (1207), Expect = 3.72e-164 Identity = 249/311 (80.06%), Postives = 280/311 (90.03%), Query Frame = 0
BLAST of Chy5G099840 vs. NCBI nr
Match: XP_023546173.1 (UBX domain-containing protein 1-like [Cucurbita pepo subsp. pepo] >XP_023546174.1 UBX domain-containing protein 1-like [Cucurbita pepo subsp. pepo] >XP_023546175.1 UBX domain-containing protein 1-like [Cucurbita pepo subsp. pepo] >XP_023546176.1 UBX domain-containing protein 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 468 bits (1204), Expect = 1.06e-163 Identity = 249/311 (80.06%), Postives = 280/311 (90.03%), Query Frame = 0
BLAST of Chy5G099840 vs. TAIR 10
Match: AT1G04850.1 (ubiquitin-associated (UBA)/TS-N domain-containing protein ) HSP 1 Score: 308.5 bits (789), Expect = 6.1e-84 Identity = 170/313 (54.31%), Postives = 230/313 (73.48%), Query Frame = 0
BLAST of Chy5G099840 vs. TAIR 10
Match: AT5G48690.1 (CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 7001 Blast hits to 5165 proteins in 492 species: Archae - 9; Bacteria - 505; Metazoa - 2653; Fungi - 905; Plants - 287; Viruses - 19; Other Eukaryotes - 2623 (source: NCBI BLink). ) HSP 1 Score: 257.7 bits (657), Expect = 1.2e-68 Identity = 162/316 (51.27%), Postives = 213/316 (67.41%), Query Frame = 0
BLAST of Chy5G099840 vs. TAIR 10
Match: AT5G48690.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567); BEST Arabidopsis thaliana protein match is: ubiquitin-associated (UBA)/TS-N domain-containing protein (TAIR:AT1G04850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 190.3 bits (482), Expect = 2.4e-48 Identity = 122/241 (50.62%), Postives = 165/241 (68.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|