Chy5G099620 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G099620
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Protein kinase domain-containing protein
Location	chrH05: 13710285 .. 13710845 (+)
RNA-Seq Expression	Chy5G099620
Synteny	Chy5G099620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGTTATCGTCTCCCATTAAGATACTCGTGGGGATTCCTTCCGATGACATTGAGGAGACCAAGATGCTTCTTTCTTGGGCAATCAATGTTCTAGCTCATCAACATGATTGCATTGTTGCTACTCATGTTCTTGGTTAGATTAACTTCACCAAATTAAGCTTTCTTCAATTCAACAATTTGTTTTTATTCTCTTTTGCCTCTAAAAAATTTGATGTCTGACAGTCAGCGACGATACAAAGAGGCGTGCATCGACGGCCATGACAATGAAAATTCAATCGCAGCTTCGTCGAGCAAAAGCCTACGTCATATCAATTCTCGGAGAGTTCGCCCACATTAGCCAATCCAAGCAGGTACATGCTTAAAAACAATAATGCGGTACTCTGTATGATATTGTACATTACTCATTTTAGACTTAAACCCTGCCTACTGGAAATGTCAGGTAAATTTGGAAGCGAGAGTCGGTTTTAACTCGAGCATTGGAAGAGGTTTGATTGAAGAAGCAAAGTCGATTTCAACCGACCTCCTTGTTCTTCGTGGTGTGAGAAACAAATCAAACAG

mRNA sequence

ATGGGGTTATCGTCTCCCATTAAGATACTCGTGGGGATTCCTTCCGATGACATTGAGGAGACCAAGATGCTTCTTTCTTGGGCAATCAATGTTCTAGCTCATCAACATGATTGCATTGTTGCTACTCATGTTCTTGTCAGCGACGATACAAAGAGGCGTGCATCGACGGCCATGACAATGAAAATTCAATCGCAGCTTCGTCGAGCAAAAGCCTACGTCATATCAATTCTCGGAGAGTTCGCCCACATTAGCCAATCCAAGCAGGTAAATTTGGAAGCGAGAGTCGGTTTTAACTCGAGCATTGGAAGAGGTTTGATTGAAGAAGCAAAGTCGATTTCAACCGACCTCCTTGTTCTTCGTGGTGTGAGAAACAAATCAAACAG

Coding sequence (CDS)

ATGGGGTTATCGTCTCCCATTAAGATACTCGTGGGGATTCCTTCCGATGACATTGAGGAGACCAAGATGCTTCTTTCTTGGGCAATCAATGTTCTAGCTCATCAACATGATTGCATTGTTGCTACTCATGTTCTTGTCAGCGACGATACAAAGAGGCGTGCATCGACGGCCATGACAATGAAAATTCAATCGCAGCTTCGTCGAGCAAAAGCCTACGTCATATCAATTCTCGGAGAGTTCGCCCACATTAGCCAATCCAAGCAGGTAAATTTGGAAGCGAGAGTCGGTTTTAACTCGAGCATTGGAAGAGGTTTGATTGAAGAAGCAAAGTCGATTTCAACCGACCTCCTTGTTCTTCGTGGTGTGAGAAACAAATCAAACAG

Protein sequence

MGLSSPIKILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTMKIQSQLRRAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVLRGVRNKSNX

Homology

[Close]

BLAST of Chy5G099620 vs. ExPASy Swiss-Prot
Match: Q5XF57 (Probable receptor-like serine/threonine-protein kinase At5g57670 OS=Arabidopsis thaliana OX=3702 GN=At5g57670 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.4e-22
Identity = 62/112 (55.36%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 8   KILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTMKIQSQLR 67
           KILV I S D +E++ +LSWAINVLA   D +VA H+LV ++ ++     M  K ++Q+R
Sbjct: 11  KILVAI-SLDRDESQNVLSWAINVLAKPSDTVVALHLLVGEEPRK---LPMKKKKRTQIR 70

Query: 68  RAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVL 120
            AKA+VIS+LGEFA+     QVNLEA+VGF+S+IGRGLI+E KSIS   LVL
Sbjct: 71  HAKAHVISMLGEFAYTCCHNQVNLEAKVGFSSNIGRGLIDEVKSISAHYLVL 118

[Close]

BLAST of Chy5G099620 vs. ExPASy TrEMBL
Match: A0A0A0LJ87 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G057590 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58
Identity = 123/127 (96.85%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MGLSSPIKILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60
           MGLSSPIK+LVGIPSDDIEE+KMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM
Sbjct: 1   MGLSSPIKVLVGIPSDDIEESKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60

Query: 61  KIQSQLRRAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVLR 120
           KIQSQLRRAKAYVISILGEFA+ISQSKQVNLEARVGFNSSIGRGLIEEAKSIS DLLVLR
Sbjct: 61  KIQSQLRRAKAYVISILGEFANISQSKQVNLEARVGFNSSIGRGLIEEAKSISADLLVLR 120

Query: 121 GVRNKSN 128
           GVRNKSN
Sbjct: 121 GVRNKSN 127

[Close]

BLAST of Chy5G099620 vs. ExPASy TrEMBL
Match: A0A5D3DMF6 (Putative receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00050 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.7e-56
Identity = 116/127 (91.34%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MGLSSPIKILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60
           MGLSSP+KILVGIPSDDI+E+KMLLSW INVLAHQHDCIVATHVLVSDDTKRRASTAMTM
Sbjct: 1   MGLSSPVKILVGIPSDDIDESKMLLSWTINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60

Query: 61  KIQSQLRRAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVLR 120
           KIQSQLRRAKAYVISILGEFA+++QSKQVNLEARV FNSSIGRGLIEEAKSIS DLL+LR
Sbjct: 61  KIQSQLRRAKAYVISILGEFANVNQSKQVNLEARVSFNSSIGRGLIEEAKSISADLLILR 120

Query: 121 GVRNKSN 128
           G RNKSN
Sbjct: 121 GARNKSN 127

[Close]

BLAST of Chy5G099620 vs. ExPASy TrEMBL
Match: A0A1S4E0E8 (probable receptor-like serine/threonine-protein kinase At5g57670 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103493022 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.7e-56
Identity = 116/127 (91.34%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MGLSSPIKILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60
           MGLSSP+KILVGIPSDDI+E+KMLLSW INVLAHQHDCIVATHVLVSDDTKRRASTAMTM
Sbjct: 1   MGLSSPVKILVGIPSDDIDESKMLLSWTINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60

Query: 61  KIQSQLRRAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVLR 120
           KIQSQLRRAKAYVISILGEFA+++QSKQVNLEARV FNSSIGRGLIEEAKSIS DLL+LR
Sbjct: 61  KIQSQLRRAKAYVISILGEFANVNQSKQVNLEARVSFNSSIGRGLIEEAKSISADLLILR 120

Query: 121 GVRNKSN 128
           G RNKSN
Sbjct: 121 GARNKSN 127

[Close]

BLAST of Chy5G099620 vs. ExPASy TrEMBL
Match: A0A1S3BSJ6 (probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493022 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.7e-56
Identity = 116/127 (91.34%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MGLSSPIKILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60
           MGLSSP+KILVGIPSDDI+E+KMLLSW INVLAHQHDCIVATHVLVSDDTKRRASTAMTM
Sbjct: 1   MGLSSPVKILVGIPSDDIDESKMLLSWTINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60

Query: 61  KIQSQLRRAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVLR 120
           KIQSQLRRAKAYVISILGEFA+++QSKQVNLEARV FNSSIGRGLIEEAKSIS DLL+LR
Sbjct: 61  KIQSQLRRAKAYVISILGEFANVNQSKQVNLEARVSFNSSIGRGLIEEAKSISADLLILR 120

Query: 121 GVRNKSN 128
           G RNKSN
Sbjct: 121 GARNKSN 127

[Close]

BLAST of Chy5G099620 vs. ExPASy TrEMBL
Match: A0A1S4E0F7 (probable receptor-like serine/threonine-protein kinase At5g57670 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493022 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 3.7e-56
Identity = 116/127 (91.34%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MGLSSPIKILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60
           MGLSSP+KILVGIPSDDI+E+KMLLSW INVLAHQHDCIVATHVLVSDDTKRRASTAMTM
Sbjct: 1   MGLSSPVKILVGIPSDDIDESKMLLSWTINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60

Query: 61  KIQSQLRRAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVLR 120
           KIQSQLRRAKAYVISILGEFA+++QSKQVNLEARV FNSSIGRGLIEEAKSIS DLL+LR
Sbjct: 61  KIQSQLRRAKAYVISILGEFANVNQSKQVNLEARVSFNSSIGRGLIEEAKSISADLLILR 120

Query: 121 GVRNKSN 128
           G RNKSN
Sbjct: 121 GARNKSN 127

[Close]

BLAST of Chy5G099620 vs. NCBI nr
Match: XP_011648925.1 (probable receptor-like serine/threonine-protein kinase At5g57670 isoform X3 [Cucumis sativus])

HSP 1 Score: 237 bits (604), Expect = 2.25e-72
Identity = 123/127 (96.85%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MGLSSPIKILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60
           MGLSSPIK+LVGIPSDDIEE+KMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM
Sbjct: 1   MGLSSPIKVLVGIPSDDIEESKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60

Query: 61  KIQSQLRRAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVLR 120
           KIQSQLRRAKAYVISILGEFA+ISQSKQVNLEARVGFNSSIGRGLIEEAKSIS DLLVLR
Sbjct: 61  KIQSQLRRAKAYVISILGEFANISQSKQVNLEARVGFNSSIGRGLIEEAKSISADLLVLR 120

Query: 121 GVRNKSN 127
           GVRNKSN
Sbjct: 121 GVRNKSN 127

[Close]

BLAST of Chy5G099620 vs. NCBI nr
Match: XP_031736529.1 (probable receptor-like serine/threonine-protein kinase At5g57670 isoform X2 [Cucumis sativus])

HSP 1 Score: 237 bits (604), Expect = 2.34e-72
Identity = 123/127 (96.85%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MGLSSPIKILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60
           MGLSSPIK+LVGIPSDDIEE+KMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM
Sbjct: 1   MGLSSPIKVLVGIPSDDIEESKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60

Query: 61  KIQSQLRRAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVLR 120
           KIQSQLRRAKAYVISILGEFA+ISQSKQVNLEARVGFNSSIGRGLIEEAKSIS DLLVLR
Sbjct: 61  KIQSQLRRAKAYVISILGEFANISQSKQVNLEARVGFNSSIGRGLIEEAKSISADLLVLR 120

Query: 121 GVRNKSN 127
           GVRNKSN
Sbjct: 121 GVRNKSN 127

[Close]

BLAST of Chy5G099620 vs. NCBI nr
Match: XP_004150333.1 (probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1 [Cucumis sativus] >KGN61124.1 hypothetical protein Csa_021159 [Cucumis sativus])

HSP 1 Score: 237 bits (604), Expect = 2.39e-72
Identity = 123/127 (96.85%), Postives = 126/127 (99.21%), Query Frame = 0


Query: 1   MGLSSPIKILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60
           MGLSSPIK+LVGIPSDDIEE+KMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM
Sbjct: 1   MGLSSPIKVLVGIPSDDIEESKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60

Query: 61  KIQSQLRRAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVLR 120
           KIQSQLRRAKAYVISILGEFA+ISQSKQVNLEARVGFNSSIGRGLIEEAKSIS DLLVLR
Sbjct: 61  KIQSQLRRAKAYVISILGEFANISQSKQVNLEARVGFNSSIGRGLIEEAKSISADLLVLR 120

Query: 121 GVRNKSN 127
           GVRNKSN
Sbjct: 121 GVRNKSN 127

[Close]

BLAST of Chy5G099620 vs. NCBI nr
Match: XP_016901701.1 (PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 isoform X3 [Cucumis melo])

HSP 1 Score: 228 bits (582), Expect = 5.56e-70
Identity = 116/127 (91.34%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MGLSSPIKILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60
           MGLSSP+KILVGIPSDDI+E+KMLLSW INVLAHQHDCIVATHVLVSDDTKRRASTAMTM
Sbjct: 1   MGLSSPVKILVGIPSDDIDESKMLLSWTINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60

Query: 61  KIQSQLRRAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVLR 120
           KIQSQLRRAKAYVISILGEFA+++QSKQVNLEARV FNSSIGRGLIEEAKSIS DLL+LR
Sbjct: 61  KIQSQLRRAKAYVISILGEFANVNQSKQVNLEARVSFNSSIGRGLIEEAKSISADLLILR 120

Query: 121 GVRNKSN 127
           G RNKSN
Sbjct: 121 GARNKSN 127

[Close]

BLAST of Chy5G099620 vs. NCBI nr
Match: TYK24450.1 (putative receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 228 bits (582), Expect = 8.21e-70
Identity = 116/127 (91.34%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 1   MGLSSPIKILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60
           MGLSSP+KILVGIPSDDI+E+KMLLSW INVLAHQHDCIVATHVLVSDDTKRRASTAMTM
Sbjct: 1   MGLSSPVKILVGIPSDDIDESKMLLSWTINVLAHQHDCIVATHVLVSDDTKRRASTAMTM 60

Query: 61  KIQSQLRRAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVLR 120
           KIQSQLRRAKAYVISILGEFA+++QSKQVNLEARV FNSSIGRGLIEEAKSIS DLL+LR
Sbjct: 61  KIQSQLRRAKAYVISILGEFANVNQSKQVNLEARVSFNSSIGRGLIEEAKSISADLLILR 120

Query: 121 GVRNKSN 127
           G RNKSN
Sbjct: 121 GARNKSN 127

[Close]

BLAST of Chy5G099620 vs. TAIR 10
Match: AT5G57670.2 (Protein kinase superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 2.4e-23
Identity = 62/112 (55.36%), Postives = 82/112 (73.21%), Query Frame = 0


Query: 8   KILVGIPSDDIEETKMLLSWAINVLAHQHDCIVATHVLVSDDTKRRASTAMTMKIQSQLR 67
           KILV I S D +E++ +LSWAINVLA   D +VA H+LV ++ ++     M  K ++Q+R
Sbjct: 11  KILVAI-SLDRDESQNVLSWAINVLAKPSDTVVALHLLVGEEPRK---LPMKKKKRTQIR 70

Query: 68  RAKAYVISILGEFAHISQSKQVNLEARVGFNSSIGRGLIEEAKSISTDLLVL 120
            AKA+VIS+LGEFA+     QVNLEA+VGF+S+IGRGLI+E KSIS   LVL
Sbjct: 71  HAKAHVISMLGEFAYTCCHNQVNLEAKVGFSSNIGRGLIDEVKSISAHYLVL 118

The following BLAST results are available for this feature:

BLAST of Chy5G099620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5XF57	3.4e-22	55.36	Probable receptor-like serine/threonine-protein kinase At5g57670 OS=Arabidopsis ...	[more]

BLAST of Chy5G099620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ87	1.1e-58	96.85	Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G057...	[more]
A0A5D3DMF6	3.7e-56	91.34	Putative receptor-like serine/threonine-protein kinase OS=Cucumis melo var. maku...	[more]
A0A1S4E0E8	3.7e-56	91.34	probable receptor-like serine/threonine-protein kinase At5g57670 isoform X3 OS=C...	[more]
A0A1S3BSJ6	3.7e-56	91.34	probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1 OS=C...	[more]
A0A1S4E0F7	3.7e-56	91.34	probable receptor-like serine/threonine-protein kinase At5g57670 isoform X2 OS=C...	[more]

BLAST of Chy5G099620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011648925.1	2.25e-72	96.85	probable receptor-like serine/threonine-protein kinase At5g57670 isoform X3 [Cuc...	[more]
XP_031736529.1	2.34e-72	96.85	probable receptor-like serine/threonine-protein kinase At5g57670 isoform X2 [Cuc...	[more]
XP_004150333.1	2.39e-72	96.85	probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1 [Cuc...	[more]
XP_016901701.1	5.56e-70	91.34	PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 isof...	[more]
TYK24450.1	8.21e-70	91.34	putative receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa...	[more]

BLAST of Chy5G099620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G57670.2	2.4e-23	55.36	Protein kinase superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 4..126 e-value: 7.1E-7 score: 31.5
IPR006016	UspA	PFAM	PF00582	Usp	coord: 9..119 e-value: 2.7E-5 score: 24.7
None	No IPR available	PANTHER	PTHR47987	OS08G0249100 PROTEIN	coord: 7..126
None	No IPR available	PANTHER	PTHR47987:SF3	OS08G0249100 PROTEIN	coord: 7..126
None	No IPR available	CDD	cd00293	USP_Like	coord: 8..119 e-value: 0.00105969 score: 34.653
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 9..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G099620.1	Chy5G099620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity