Chy5G099570 (gene) Cucumber (hystrix) v1

Overview
NameChy5G099570
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionNAC domain-containing protein
LocationchrH05: 13636366 .. 13645163 (+)
RNA-Seq ExpressionChy5G099570
SyntenyChy5G099570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCTCTGGTTAGCTGTGAGGCTTTGGATGCTGAATTCCAGGTATATTGTCTTTGGCCTTTTCACTTCTATCACCGTGGGCATTTGAAATTTATTTATTTTCTATTTTTTTTTTGTAACCTTAACCGAATATCATGATTGTTGAATACTTATATGCCAAGTCAATGAGATTCCATATGTAAATTATTTAATTAGTTGTTTGGCATTTAAGGATTTAATTGATTTTGATCATTTAATGTCAATTTTTGAAATGGGTAATGGATTCTAAGCTCAATATATATTATGTTGCCTAAGGTGGTTTTTATTTTATTAGGTTGGTATTGTTGCTAAACACTTATTGGTTTTTACTACTACCTTTATAGTCTCTAGGATGCATCCATTAGTATGTAACATGTGAGTGGCATTTAGATATTTGTTAGCATATCTACTCTTTAATCTAACTTCATTTCATTATCCATTCGAGGCTGTAGAGAGGGAGAATATCTAATTTTCTTTCCTGTTCTGGCAATTGGCCCAAAGTTACTCATTTGGAAGGATTCTAATTTTATGAATGATATTTCGCCATATTGTATTCGGATTCAATTCCAATGACACAAATGTTATATTTTTAGGAATACGATTCTTGTATTTCTATTGGAGAGTTTGTATGATAACTGATAATACATTAGCTATCTTACTAGTACTTGGAAAGATTGTGAAAAACTGGAAAGATCGGCTCTAAGACCCCTTTTTATCTTCACAATATTTGATGGAGATTTCACGCCTCCAAAAACAGCCTTCATCTGTATCTTTTCACTTGTTGAAAGGTTTGTTGCTAAGGTATTCCATGATTTACACGAAGAGATCATTTCAACAACTGCAAGAGGCCATAGTCTTATGATTCTGGTGCAACAACTTGAGGCAGAGGTTCCTTCAATTGAGAAAGCATTTCTATCCCAGACAAATCATACATCTTTCTTCACTAGTACAGGTTCGTCTATCACATATATTGTTATATTTTTGCCAACAATCATGGTCACCACATTGTTTATATTGATGGATTTGAACAATTAATTAGAGATCATGAGCTGGTACAAACAAATGAATTCATGTTCCCTCGTTTTCCACTTTATTTTTTTATTATTTTAAAGAATGTAATGTAGGGGCTTAGAAGATTCTAATTTCCAGTCTTCTATGGTTATTTTATGATTTTAATTGGAAGTTTGAATCTGTTTCTCTTTTAAAAAAATGTGTAGCGTACTTTTTAATTGTAGGTTCAACTGGAGCCGACAAGTTCATGAGTTTTGGTTCAAAGAAGTTTATCTGGACCATCAAAATACACTGGCTAGCATGGTTCGAGCAACAAAGAATATTATTAGACATGAAGGCTTACCAGTTGATTGTTTATGCTTGTGTAGAAAATCATGTTATATGTATTCATATGGTATTTTCACTAGTTTTGTTTAACGGCTGGAATTCCATACTTTCTGTTTTTTATGTACTTGTAAATTGCTTCAAACTTGATTGAAAATGTACGAATATTACGAAGTGTATTATAGCGTATATATATTAAAGTGTCGATTATTTGTTTCTATATGGGTGTGATGTATTAGAACATTATTGTCATTCAAATGGTTCGTGTAATGGCAAAGCGTCAAGAAGAACAGGAAAAAACTGCAGTAATTGGAGAATTTGCAACAGGAAAAACAATGTCATAATATATGAATTCGTGACATTTCTTAATTGTTGTCAACATTAAAATAATGACAATTTTTATATATAAAAAACGGCCACGATTGGCCTTTCTTTGACAGAAAAAAAAATGTCGTCAATAGCGAAACAATGACATTTGATTTTATAAAAAAACTTTCACGATTGGCATATCTTTGACAAGGAAAAATTGTCATAAAATACGAATTCGTGACATTTTTTTAACTTTCGTCAATTTCGAAAATATGATATTTTTTTATTTATAAAAACTACCACAATTGGCATATCCTTGACATTTAAAAAATGTCATAATAAACGAATTTGTGACATTATTTTAACTGTCGTTAATATGCAAATGATTACCGTTATTTGTTGTCATAAAATAAAATATGACAGTTATTTGTTGTCATAAAATAGTAATTATTGACATTTATTTTCTGACATGAAAAATCTTATTACGACAGTTTTTGAAAACTGTCATGGAAGGACTTTCCACAACAGACGATACTATGACTGTAAATAATTGTCACGGATTTTGTTCGCGACAAAAAATAACTGTCGTCGAAGACCATTTTTGTTGTAGTGTTTCCACCATGCCAATAGCATCCTCTATATGTTCTCCAATACAACTCGTTAGACAAGGGAACTAAATCGTACAAGAGTAGATCTAGGCAGTGTTACAAATCTTAGAAATCAACTCATGAAAATCTTTCATAATATCACATACAATCAAATTCAAAATATGGGCACAACATTTAACGTACACAAATTTACCATTCAAAACCAACCCGTTCTTGAAAAAATGAACTAAATAAGAAATATCAACGTCAATTGAGCAAGCATTTTCTAACGTTTAAATTGACAATATTTCTAACGTCAGTGTCAATATTTTTTCAATACACCATTTGTTCAAACATCCTACTGCTTCTTTTCCATTAGTCTCTCCATCAAAATTCTCAATTGAATGAAAATTGACAACCTTCTTCTGCATTTTCCAATTGACATCAATGAAATGATGTCCAGTAAGAATTGTATAGTTAATATCTTGATCCGACATCTAAGTATCAATTGTGAGAGAAACTCTAGGATCTTGTTCTATAAAAATCTTTTTTATAGAGAACCGTATCTCACTTCGATATATTTTAAATTTATATTTCACAAAGCTAAGAGGTGGTTTATGAATAATGATCATTTTTTAATTAATCCAAATATTTTAATATTATATAAAAGTATAAAACAAGTGATTAGGAGGGTAAATGGATGAGATAACTTTGAGAATGGCAAAAAATTGGATAACAAACTGAAAAATAGTAAATTTAAAAAATATTAAGATTTATAGCAAAACTGGAGTTGTAGACTTCTTTTTTACTTTTTTTTTACTGATTATACCTCTTTGTATACGAAAATTCTTTTCCGTAAGATACAGTGTGTTTGTATAGGTAAAAAAATGATCCAGGATATGACAGATTCACAGTTATAGTGTATTTGCAAAACCATCAATTTGGAAAATATTAAATAATTTTTTATTTTTTGACTATATAAGATTACACCAACATCCCCTAGATTTATGTATGCAATTTATACATGATTTTCGGATTTTTAGGTTTCAAATCAATTAATTAACAATTTATTTCTATAATTCATAATATATATATAGTAATGACTATTTGAATTCAAATTTTGTTGTCACCTTTAAAATAATGGTTAATATAATTTCATCACTTTCAGTTTCATAAAGTTCCTTTTAATATTTATTAATATTTTATTATATAATACATAATACATATTTTTCATATTTCTAATAACAATTTGAAGTTAGATTTTATACATCCAATAAAATCGTCAATTTGAATTCTTTTAAACGATCATATCCCTAAAATAATGGCAAACATAAATTCAACGTTTTTTAATTATTTATATTTCAAAATATTTATAAAAATTTTTGAATTTAAATACCTCCAAAATACATATGCTTAATAACAATTTGAATTTAAGATTTTATCATTTTCTAAAATCGTGCTAATTACCATTATCCACTTATTTTATTAAAGAAAATTCACTCCTAAAGTCGTGCTATTTAATTTAGTTGATATCCTTAAAATAATGGCAAACATAAATTTTATATCTTCGAATTATTTATATTTCAAAATATTTATAAAAATTTGAATTTAAATACCTCAAAAATATGTATTGTTAATAACAATTTGAATTTCAAATATTATCATTCCCTAAAATTGTGCTAAGTACAATTATCCACTTATTGTATTAAAAATTATATCATCTTCTAAAATCGTGTTATTTGATTGATATCCCTAAAATAATGGCAAACATAAATTCAACATTTTTGGATTATTTATATTCCAAAATATTTATAAAAATTTTGAATTTAAATTTTGAATTTAAATACTTCCAAAATACGTATGGCTAATGACAAATTGAATTTAAAATTTTATCTTCCCCTAAAATTGTGCTAATTGGTTGATTTTTTAAAAAAAAAAAATTGGTTTATTGTGCCCATGGTATTGAATAATTATTTTGAGACGTTGTGTTTTTAAGTTACGTTGATATCTCCGTTTATTTCCATCTAGTAAGAGTTTCAAATACACCATAATTGTGATCCACAATCCTTAAAATCTCATAGTCATCCATTATACAAACATATTCTAATCAACAGCTTTGGGACGTACAAAAAAAGATAAAAAAATTTGATCATCAAGATGTAGTATCATTCCCTAGATATATGATAATTCACATATTCCAAATATAATGTATTTCAATATGTCAAAAAAATGAGAAAGGATATTGAAAAAAACACAAATTCACTGTATTTTGTAAATAACATTTAAATTTGGTAAATTTTAACTAAATATGTTATTTTGTTGTTGAACAAAATTGCACCAACCTCCCCTATAATAATGACAAATATATATACAAAAAAATTTGGCTTTTTTATATTTTAAACAATTTATTAAACAATGCATAATATAGTTTTAATAACAATATGTACTTAAATTTTAGATCATCTCCTAAAATAATGCCAAATATAAATACAAGATTTTCACATTTTTTATAATTTAAACAATTTATTAAATAATACGTAATATAGTTTTAACAACAATTTGAATTTAAATTTTAGATCATTCCCTAAAATAATGTCAAATATAAATACAAGAATTTCACTTTTTTATATTTCCAGCCGATTTTACCTGTATAGAGAGAAATTCTTATCCGATAGATACAGTGTATTTGTGTAGGTTAAAATGATGAAATATAACCCAGAATCACAGATACAGTGTATTTGCAAATAATTCAGTTGTGTAAAAATATTAAATAAATATTTATTTTCGGGATAAATTTGATTGAATCAAAATCTCATAGATTTATGCTTGCAATTTATACAAGATTTTCGTGTTTATAGGTTTCAAATCAAGTAATTAATAATTTATTTAGTTGTGGTTGTTAAAATTAAAATTGTATCTTACCCCTATAATTATGATGCATTTAATGTATATATGATTATTCTAAGAAAATTTTGATCTTCCCCTCTAATCGTGATACTTCATTGATTTTCCTAAACTTTTCATATTTCTAATAACAATTTATTTAACATAATAATAAATTTGAATTAAAATTGTATCTTACTCCTATAATTATGATGCATTTAATAGGATAATTCTAATAAAATTTTGATCTCCCCTATAATCGTGCTACTTGATTGATTTTCCTAAAACGATGTCAAACATAATTTCAAAATTTTAGGGTTATCTTGTTAATATCTGTTATCTATTTTCAATAATTGTTTTTTAAAAATAGATTTTAAATTTTGATTTGAAACCGCCAAAATATTAAAATTGCTTTAAAAATAGGTATTGTTAATAATAATTTGATTTTAAAATTTAATCATCCCTAACATCGTGCTAAGATTATCCACTTATGTTATTAAAATTTTTATCATCCCCTAAAATCGTGTTATTTGCTTCTCATCTCCAAAATAATATCCAAATAAGATCTTCAACAAAACCCTCAAAATTTATGTTAGGATGGATTGGATTTTCGTGTTATTTATTTATTTTTTATTTTAAGTATATTATTTATTAACTTAAAATACTTAAATTTGTCTACCGCTCATTTTAACACTAAAATTTCATAAACTCAAATGTTAAATATCAAAAATCAACATATATATTACAAACTTAAAAAAAAAAAACTTAGTAATAATATGTATGAGTTATCCCATTTATAGGTTGTAATATATATTTTAATAATATTAGAAATTTGGGATGAATTGAGTCCACCCAAATTTAAAAATATATAACCCGAATCAAATTCAATCCGAAAAAACATTAAAAAAAATTCAACCTAACTCAACTTAAAATAAGAACTAACCCAATCCAACACTTACAACTTGGATTGAATAGTGTTGGGTTAGATTATTTTACACTAATATTTAATATTTTATTAACATTGAAGTATTCATTTATTTTAAAATTTAATGATAATACATTTTAATATTTGTAAAAGGATCAATTCGGAGCATTTTTGCGGGAAAATAAATTACAATTTTGGCGCCACTTAAAAAAAAACAAACAAACAAACCCTCTCAAAGTGCAAACCTATAAATGAATTAAACTTCGTTTCATTAATTTCATAAATGCAAACCTCCATCTCCCTCTCCCTCACCACCCCCTTCGCCGCCGTATCCGATAAAAAGATGTAATCTTCCGTAATCATAATTATATCATTAATAATGTTAGACGTATTTAAATAATAATAATTAAGGTGAGTAATGTACATAAATACTCAATCTTTCTCTATCTCATTGAGCTGAGAGATCTTGAACAAGATACAGTAGCTATTTTATAACCGAGAGATCCTGAGCAAGACATAATAGTCATTTTATAGTCATCATCAATTACTAGAACATGAAATCAGGTATGTAATTTATTCTTGACAATTTGACATAAATGATCTTGGGTTAATCTATCATATAGATATTATATAGATCTAAATATTTATGCCTAACACATTTTGCTTGAAAATATATTACAACAAATATAATTGAAATAACTAACAATTCTACGGAGAAGAAAAAGAATGTCATCCCATTCAACTAAAACCACGATTAGATTTCGTGGAGTTCTATAGTTAGCTAATATGGAATAAGACGTTCGCTTTCAAAGAAAAAAATTCTATTCAACTAAATAAATTTTCTCATGCATGCTCTCTTTTCCTAAATTTGTAATTAATTACAAATCAACACACAAATTAAATAACCAAAAGATATTTTCTTTGCCTGTTGTTGTGTAGCAATGGATTCTTCAAGTGGTTATTTACTATTACCATTGAATCACTGTGTTGACGTCAAGTTTAGGCCTACCGATCAATAACTTTTTCATTATCTTCATTGTAAGATTTATGGTCAGACTTATTTTCAAGGAGCTGTTTTCGACTTTGATTTTTACGGTGGGGTCGAGCCATGGGAAATCTGGCAAAGTTTCAGAGGAATTGATGGCGAAGATCTTTACTTCTTCACTAAGCTCAAGAGGTCGACAACTAACTCTGGAAATTTATCTACTCACATTAATCGTAAGATTGGGCTCGTCAATGGTACTTGGAGTGGCGAGAATTCAACTAGTCCAATTAATGTTAGTATTTTGTGGAAATTGTCAAGGTATTTGTCTATTTGGTATTTTGTGATAAATGATATAATTTTGTAAATTATAGGTATGAGAATGAGTCGTTGGAAGACACCATGGTGAATGGATAATGCATGAATATAGCTTCCATCAAGATTATTTGAGGTGTGAAGGTGTAGATCCCAATTATGTTTTATGTAGGATAAGGAAGAATGAAAGAGCTAAAAGAAAATTATTAGAAATTTAAGGTGGGGTGAAACAACCTAACAAGAAAAGAATAAAGGCACCTCAGATCTGAAAGACCAAAAGCCAAAACAAAGGAAATATGTGACGAGTTACGACAGATAGATCAATGAATTATCATTTATTTATTTTTTATAATACAATAAATATCATTCTTTGTCGCTCCAAATAACACCTTAGTATCTATCTATTTTCATACTATAAAATTAATTTGAATTCTATAAAAAAAAAAAGAATTATATTGAAGTATTGATGGAAGTAATGGTGAATCCAACCAAAGTTCCAAAATAAACCAATGAAAATTAATGAAATTTAGATTAAACTATAGAGAGTAGCTCAATTGAAACATCTTCGATAAACATATGATAAATTTTAAATTTAGATTTAATTTACAAGTATTTCTAGTTTATTGATTTTTTTTTTTTTTTTTTGTAATTCAGTTTTGAATAGATATTTGTTAGGTGTGAGTGTCTTGTATTTCTAATTTAAATTTCTATACGTAGTTTTGGTTAAATAGTTTCCAAAATTCTGAAATCTATATCTATCTAATCTCTAAATGTTTAAAAGTGTCTAATAAATCTTAAATTTTTTATCCCTCCATAAAAGTTATGTCTATAAATTTGTCTTTGTTCCGTCCAACTATCACGTTAAAATGTTAAAGGTTGTAACAACGTTTGGCCATTCACAAGATACATATCCTAAAGGCAAAGAAGAGTTTTTTCTTTTCTGGATCCTTTTGACAATACAATACCAAAAAATTTAACAGGAAAAAGCAAGCTAAGCCTAAAGAGTTCAAATGTAAAGCATCTAGTCACCTTTTTTTTTTTTTGGTTGACGCTGCTTTTAAGATTGTTTCAAAATCTAAAACAAAAAATAAAAAAAAAAGATCATACAAATAACATCAAATCACAGTAAGCACATTAGCAGGTTCATGTTAGCATATATTAAAATTTTCATACCTTAAGTTTAGATTTATAATTTTCTTTTTATTTTCAACCGGACTAAGGTTGATTTATATACTTAAACACGATCATAATTGTACGATAAATATGTTAGATAATCAAAAACATTATTATTCTATTTTTTAGGACACACTTAAAACATGTGAATATATTTCTTTTTCAAATAAAAAAAATATTTTATCATATTATTAAGATGGCATTACAATTGAGACAACGGGTTGATTTCAACCACATGAAAATTGCTTGGACTTGGTTGGAAGTATGA

mRNA sequence

ATGGAGGCTCTGGTTAGCTGTGAGGCTTTGGATGCTGAATTCCAGCAATGGATTCTTCAAGTGATTTATGGTCAGACTTATTTTCAAGGAGCTGTTTTCGACTTTGATTTTTACGGTGGGGTCGAGCCATGGGAAATCTGGCAAAGTTTCAGAGGAATTGATGGCGAAGATCTTTACTTCTTCACTAAGCTCAAGAGGTCGACAACTAACTCTGGAAATTTATCTACTCACATTAATCGTAAGATTGGGCTCGTCAATGGTACTTGGAGTGGCGAGAATTCAACTAGTCCAATTAATGTTAGTATTTTGTGGAAATTGTCAAGGTATGAGAATGAGTCGTTGGAAGACACCATGATGGCATTACAATTGAGACAACGGGTTGATTTCAACCACATGAAAATTGCTTGGACTTGGTTGGAAGTATGA

Coding sequence (CDS)

ATGGAGGCTCTGGTTAGCTGTGAGGCTTTGGATGCTGAATTCCAGCAATGGATTCTTCAAGTGATTTATGGTCAGACTTATTTTCAAGGAGCTGTTTTCGACTTTGATTTTTACGGTGGGGTCGAGCCATGGGAAATCTGGCAAAGTTTCAGAGGAATTGATGGCGAAGATCTTTACTTCTTCACTAAGCTCAAGAGGTCGACAACTAACTCTGGAAATTTATCTACTCACATTAATCGTAAGATTGGGCTCGTCAATGGTACTTGGAGTGGCGAGAATTCAACTAGTCCAATTAATGTTAGTATTTTGTGGAAATTGTCAAGGTATGAGAATGAGTCGTTGGAAGACACCATGATGGCATTACAATTGAGACAACGGGTTGATTTCAACCACATGAAAATTGCTTGGACTTGGTTGGAAGTATGA

Protein sequence

MEALVSCEALDAEFQQWILQVIYGQTYFQGAVFDFDFYGGVEPWEIWQSFRGIDGEDLYFFTKLKRSTTNSGNLSTHINRKIGLVNGTWSGENSTSPINVSILWKLSRYENESLEDTMMALQLRQRVDFNHMKIAWTWLEV*
Homology
[Close]
BLAST of Chy5G099570 vs. ExPASy TrEMBL
Match: A0A0A0KXM1 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 3.3e-37
Identity = 84/113 (74.34%), Postives = 89/113 (78.76%), Query Frame = 0 

Query: 11  DAEFQQWILQVIYGQTYFQGAVFDFDFYGGVEPWEIWQSFRGIDGEDLYFFTKLKRSTTN 70
           D +   ++   IYGQ YFQGAVFDFD YGGVEPWEIWQSF GIDGEDLYFFTKLKRSTTN
Sbjct: 24  DQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTN 83

Query: 71  SGNLSTHINRKIGLVNGTWSGENSTSPINVSI-------LWKLSRYENESLED 117
           SGNLSTHINRKIGLVNGTWSGENS SPI V+          K  RYENESLE+
Sbjct: 84  SGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQIIGYRKRFRYENESLEE 136

[Close]
BLAST of Chy5G099570 vs. ExPASy TrEMBL
Match: A0A0A0M0I5 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G652300 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.6e-36
Identity = 82/113 (72.57%), Postives = 88/113 (77.88%), Query Frame = 0 

Query: 11  DAEFQQWILQVIYGQTYFQGAVFDFDFYGGVEPWEIWQSFRGIDGEDLYFFTKLKRSTTN 70
           D +   ++   IYGQ YFQGAVFDFD YGGVEPWEIWQSF GIDGEDLYFFTKLKRSTTN
Sbjct: 54  DQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTN 113

Query: 71  SGNLSTHINRKIGLVNGTWSGENSTSPINVSI-------LWKLSRYENESLED 117
            GNLSTH+NRKIGLVNGTWSGENS SPI V+          K  RYENESLE+
Sbjct: 114 CGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLEE 166

[Close]
BLAST of Chy5G099570 vs. ExPASy TrEMBL
Match: A0A0A0LFJ5 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G838730 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 1.6e-36
Identity = 83/113 (73.45%), Postives = 88/113 (77.88%), Query Frame = 0 

Query: 11  DAEFQQWILQVIYGQTYFQGAVFDFDFYGGVEPWEIWQSFRGIDGEDLYFFTKLKRSTTN 70
           D +   ++   IYGQ YFQGAVFDFD YGGVEPWEIWQSF GIDGEDLYFFTKLKRSTTN
Sbjct: 24  DQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTN 83

Query: 71  SGNLSTHINRKIGLVNGTWSGENSTSPINVSI-------LWKLSRYENESLED 117
           SGNLSTHINRKIGLVNGTWSGENS SPI V+          K  RYENES E+
Sbjct: 84  SGNLSTHINRKIGLVNGTWSGENSASPIYVNEDDQQIIGYRKRFRYENESSEE 136

[Close]
BLAST of Chy5G099570 vs. ExPASy TrEMBL
Match: A0A1S3B941 (protein SOMBRERO-like OS=Cucumis melo OX=3656 GN=LOC103487114 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 5.8e-34
Identity = 75/114 (65.79%), Postives = 86/114 (75.44%), Query Frame = 0 

Query: 11  DAEFQQWILQVIYGQTYFQGAVFDFDFYGGVEPWEIWQSFRGIDGEDLYFFTKLKRSTTN 70
           D +  +++   IY Q YFQGAVFDFD YGG+EPWEIWQSF+GIDGEDLYFFTKLKRSTTN
Sbjct: 24  DQQLLRYLCCKIYDQPYFQGAVFDFDLYGGIEPWEIWQSFKGIDGEDLYFFTKLKRSTTN 83

Query: 71  SGNLSTHINRKIGLVNGTWSGENSTSPI--------NVSILWKLSRYENESLED 117
           SGNLSTHINRKIG  NGTWSGENS +PI         +    K  RYEN+ L++
Sbjct: 84  SGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQIIGYRKRFRYENDQLQE 137

[Close]
BLAST of Chy5G099570 vs. ExPASy TrEMBL
Match: A0A5D3BNU6 (Protein SOMBRERO-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00160 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.0e-33
Identity = 75/114 (65.79%), Postives = 85/114 (74.56%), Query Frame = 0 

Query: 11  DAEFQQWILQVIYGQTYFQGAVFDFDFYGGVEPWEIWQSFRGIDGEDLYFFTKLKRSTTN 70
           D +   ++   IY Q YFQGAVFDFD YGG+EPWEIWQSF+GIDGEDLYFFTKLKRSTTN
Sbjct: 24  DQQLLHYLRCKIYDQPYFQGAVFDFDLYGGIEPWEIWQSFKGIDGEDLYFFTKLKRSTTN 83

Query: 71  SGNLSTHINRKIGLVNGTWSGENSTSPI--------NVSILWKLSRYENESLED 117
           SGNLSTHINRKIG  NGTWSGENS +PI         +    K  RYEN+ L++
Sbjct: 84  SGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQIIGYRKRFRYENDQLQE 137

[Close]
BLAST of Chy5G099570 vs. NCBI nr
Match: XP_004142192.1 (NAC domain-containing protein 83 [Cucumis sativus] >KGN54288.1 hypothetical protein Csa_017977 [Cucumis sativus])

HSP 1 Score: 163 bits (413), Expect = 1.04e-46
Identity = 85/113 (75.22%), Postives = 91/113 (80.53%), Query Frame = 0 

Query: 11  DAEFQQWILQVIYGQTYFQGAVFDFDFYGGVEPWEIWQSFRGIDGEDLYFFTKLKRSTTN 70
           D +   ++   IYGQ YFQGAVFDFD YGGVEPWEIWQSF GIDGEDLYFFTKLKRSTTN
Sbjct: 24  DQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTN 83

Query: 71  SGNLSTHINRKIGLVNGTWSGENSTSPINVS-----ILW--KLSRYENESLED 116
           SGNLSTHINRKIGLVNGTWSGENS SPI V+     I+   K  RYENESLE+
Sbjct: 84  SGNLSTHINRKIGLVNGTWSGENSASPIYVNKDHEQIIGYRKRFRYENESLEE 136

[Close]
BLAST of Chy5G099570 vs. NCBI nr
Match: XP_004139160.1 (NAC domain-containing protein 105 [Cucumis sativus] >KAE8653567.1 hypothetical protein Csa_006844 [Cucumis sativus])

HSP 1 Score: 161 bits (407), Expect = 7.27e-46
Identity = 83/113 (73.45%), Postives = 90/113 (79.65%), Query Frame = 0 

Query: 11  DAEFQQWILQVIYGQTYFQGAVFDFDFYGGVEPWEIWQSFRGIDGEDLYFFTKLKRSTTN 70
           D +   ++   IYGQ YFQGAVFDFD YGGVEPWEIWQSF GIDGEDLYFFTKLKRSTTN
Sbjct: 28  DQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWQSFGGIDGEDLYFFTKLKRSTTN 87

Query: 71  SGNLSTHINRKIGLVNGTWSGENSTSPINVS-----ILW--KLSRYENESLED 116
            GNLSTH+NRKIGLVNGTWSGENS SPI V+     I+   K  RYENESLE+
Sbjct: 88  CGNLSTHVNRKIGLVNGTWSGENSASPIYVNENCEEIIGYRKRFRYENESLEE 140

[Close]
BLAST of Chy5G099570 vs. NCBI nr
Match: XP_011652873.2 (NAC transcription factor 56 [Cucumis sativus])

HSP 1 Score: 160 bits (404), Expect = 2.22e-45
Identity = 83/113 (73.45%), Postives = 90/113 (79.65%), Query Frame = 0 

Query: 11  DAEFQQWILQVIYGQTYFQGAVFDFDFYGGVEPWEIWQSFRGIDGEDLYFFTKLKRSTTN 70
           D +   ++   IYGQ YFQGAVFDFD YGGVEPWEIW+SF GIDGEDLYFFTKLKRSTTN
Sbjct: 24  DQQLLHYLHCKIYGQPYFQGAVFDFDLYGGVEPWEIWESFGGIDGEDLYFFTKLKRSTTN 83

Query: 71  SGNLSTHINRKIGLVNGTWSGENSTSPINVS-----ILW--KLSRYENESLED 116
           SGNLSTHINRKIGLVNGTWSGENS SPI V+     I+   K  RYENES E+
Sbjct: 84  SGNLSTHINRKIGLVNGTWSGENSASPIYVNEDDQQIIGYRKRFRYENESSEE 136

[Close]
BLAST of Chy5G099570 vs. NCBI nr
Match: XP_008443554.1 (PREDICTED: protein SOMBRERO-like [Cucumis melo])

HSP 1 Score: 152 bits (385), Expect = 1.02e-42
Identity = 75/114 (65.79%), Postives = 86/114 (75.44%), Query Frame = 0 

Query: 11  DAEFQQWILQVIYGQTYFQGAVFDFDFYGGVEPWEIWQSFRGIDGEDLYFFTKLKRSTTN 70
           D +  +++   IY Q YFQGAVFDFD YGG+EPWEIWQSF+GIDGEDLYFFTKLKRSTTN
Sbjct: 24  DQQLLRYLCCKIYDQPYFQGAVFDFDLYGGIEPWEIWQSFKGIDGEDLYFFTKLKRSTTN 83

Query: 71  SGNLSTHINRKIGLVNGTWSGENSTSPI--------NVSILWKLSRYENESLED 116
           SGNLSTHINRKIG  NGTWSGENS +PI         +    K  RYEN+ L++
Sbjct: 84  SGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQIIGYRKRFRYENDQLQE 137

[Close]
BLAST of Chy5G099570 vs. NCBI nr
Match: KAA0053644.1 (protein SOMBRERO-like [Cucumis melo var. makuwa] >TYK00815.1 protein SOMBRERO-like [Cucumis melo var. makuwa])

HSP 1 Score: 152 bits (383), Expect = 2.04e-42
Identity = 75/114 (65.79%), Postives = 85/114 (74.56%), Query Frame = 0 

Query: 11  DAEFQQWILQVIYGQTYFQGAVFDFDFYGGVEPWEIWQSFRGIDGEDLYFFTKLKRSTTN 70
           D +   ++   IY Q YFQGAVFDFD YGG+EPWEIWQSF+GIDGEDLYFFTKLKRSTTN
Sbjct: 24  DQQLLHYLRCKIYDQPYFQGAVFDFDLYGGIEPWEIWQSFKGIDGEDLYFFTKLKRSTTN 83

Query: 71  SGNLSTHINRKIGLVNGTWSGENSTSPI--------NVSILWKLSRYENESLED 116
           SGNLSTHINRKIG  NGTWSGENS +PI         +    K  RYEN+ L++
Sbjct: 84  SGNLSTHINRKIGSANGTWSGENSATPIYANEDDHEQIIGYRKRFRYENDQLQE 137

The following BLAST results are available for this feature:
BLAST of Chy5G099570 vs.
Match NameE-valueIdentityDescription
BLAST of Chy5G099570 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXM13.3e-3774.34NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296900 PE=4 SV... [more]
A0A0A0M0I51.6e-3672.57NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G652300 PE=4 SV... [more]
A0A0A0LFJ51.6e-3673.45NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G838730 PE=4 SV... [more]
A0A1S3B9415.8e-3465.79protein SOMBRERO-like OS=Cucumis melo OX=3656 GN=LOC103487114 PE=4 SV=1[more]
A0A5D3BNU61.0e-3365.79Protein SOMBRERO-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15... [more]
BLAST of Chy5G099570 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142192.11.04e-4675.22NAC domain-containing protein 83 [Cucumis sativus] >KGN54288.1 hypothetical prot... [more]
XP_004139160.17.27e-4673.45NAC domain-containing protein 105 [Cucumis sativus] >KAE8653567.1 hypothetical p... [more]
XP_011652873.22.22e-4573.45NAC transcription factor 56 [Cucumis sativus][more]
XP_008443554.11.02e-4265.79PREDICTED: protein SOMBRERO-like [Cucumis melo][more]
KAA0053644.12.04e-4265.79protein SOMBRERO-like [Cucumis melo var. makuwa] >TYK00815.1 protein SOMBRERO-li... [more]
BLAST of Chy5G099570 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036093NAC domain superfamilyGENE3D2.170.150.80NAC domaincoord: 14..137
e-value: 1.7E-7
score: 33.2
NoneNo IPR availablePANTHERPTHR31989NAC DOMAIN-CONTAINING PROTEIN 82-RELATEDcoord: 21..99
NoneNo IPR availablePANTHERPTHR31989:SF220NAC TRANSCRIPTION FACTOR-LIKE PROTEINcoord: 21..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy5G099570.1Chy5G099570.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003677 DNA binding