Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGGATGTATTTCCCATCGATCATCTTCCACCGCCGCCGCCGCCGACAGAGTCCAAGTTGTCCACCTGAATGGCCATGTCCAACACTTCCACAGCCCCATCACTGCCCGTCAGGTCGCTGGAAGACCGCCACCTCCGGCTGAGTACTTCATCTGCACGGCGGCGCAGCTGGTCTCCACCGCAGCCAGCCCAGCGCTTAACCCCGACGTCGTCCTGCAGCCGGGCAAAGTTTATTTCATTCTCCCCTTCTCCACTCTTCATCCCGACGTTTCTCTGGCCGACTTGGCCTCCATTGCCAGAAGGCTCACCGCCGCGGCGAAGTCGGCCGCAAAATCCGGCAGTCTTCCGCCGTGTGAGGCTGCCGACGGGGGGGGAGATTGGAGGTGTACGGCAGCGGGGAAATCTAGGCAGTGGAGGCCGTTGTTGGACACAATAAAGGAAAAGCCGGCGAATAATTGCGGGAGGATTGATTCAGATTTGGAAAGATAA
mRNA sequence
ATGGGTGGATGTATTTCCCATCGATCATCTTCCACCGCCGCCGCCGCCGACAGAGTCCAAGTTGTCCACCTGAATGGCCATGTCCAACACTTCCACAGCCCCATCACTGCCCGTCAGGTCGCTGGAAGACCGCCACCTCCGGCTGAGTACTTCATCTGCACGGCGGCGCAGCTGGTCTCCACCGCAGCCAGCCCAGCGCTTAACCCCGACGTCGTCCTGCAGCCGGGCAAAGTTTATTTCATTCTCCCCTTCTCCACTCTTCATCCCGACGTTTCTCTGGCCGACTTGGCCTCCATTGCCAGAAGGCTCACCGCCGCGGCGAAGTCGGCCGCAAAATCCGGCAGTCTTCCGCCGTGTGAGGCTGCCGACGGGGGGGGAGATTGGAGGTGTACGGCAGCGGGGAAATCTAGGCAGTGGAGGCCGTTGTTGGACACAATAAAGGAAAAGCCGGCGAATAATTGCGGGAGGATTGATTCAGATTTGGAAAGATAA
Coding sequence (CDS)
ATGGGTGGATGTATTTCCCATCGATCATCTTCCACCGCCGCCGCCGCCGACAGAGTCCAAGTTGTCCACCTGAATGGCCATGTCCAACACTTCCACAGCCCCATCACTGCCCGTCAGGTCGCTGGAAGACCGCCACCTCCGGCTGAGTACTTCATCTGCACGGCGGCGCAGCTGGTCTCCACCGCAGCCAGCCCAGCGCTTAACCCCGACGTCGTCCTGCAGCCGGGCAAAGTTTATTTCATTCTCCCCTTCTCCACTCTTCATCCCGACGTTTCTCTGGCCGACTTGGCCTCCATTGCCAGAAGGCTCACCGCCGCGGCGAAGTCGGCCGCAAAATCCGGCAGTCTTCCGCCGTGTGAGGCTGCCGACGGGGGGGGAGATTGGAGGTGTACGGCAGCGGGGAAATCTAGGCAGTGGAGGCCGTTGTTGGACACAATAAAGGAAAAGCCGGCGAATAATTGCGGGAGGATTGATTCAGATTTGGAAAGATAA
Protein sequence
MGGCISHRSSSTAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGGDWRCTAAGKSRQWRPLLDTIKEKPANNCGRIDSDLER*
Homology
BLAST of Chy5G099230 vs. ExPASy TrEMBL
Match:
A0A0A0LHC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060490 PE=4 SV=1)
HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82
Identity = 158/164 (96.34%), Postives = 159/164 (96.95%), Query Frame = 0
Query: 1 MGGCISHRSSST-AAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLV 60
MGGCISHRSSST AAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLV
Sbjct: 1 MGGCISHRSSSTAAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLV 60
Query: 61 STAASPALNPDVVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPC 120
STAASPALNPDVVLQPGKVYFILP STLHPDVSLADLASIARRLTAAAKSAAKSGSLPPC
Sbjct: 61 STAASPALNPDVVLQPGKVYFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPC 120
Query: 121 EAADGGGDWRCTAAGKSRQWRPLLDTIKEKPANNCGRIDSDLER 164
EAADGG DWRCT AGKSRQWRPLLDTI+EKP NNCGRIDSDLER
Sbjct: 121 EAADGGEDWRCTTAGKSRQWRPLLDTIREKPGNNCGRIDSDLER 164
BLAST of Chy5G099230 vs. ExPASy TrEMBL
Match:
A0A5D3CAJ8 (DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1411G00050 PE=4 SV=1)
HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 146/163 (89.57%), Postives = 154/163 (94.48%), Query Frame = 0
Query: 1 MGGCISHRSSSTAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVS 60
MGGC+S RSSS AAADRVQVVHLNGHVQHFHSPITARQVA +PPPP EYFICTAAQLVS
Sbjct: 1 MGGCVSLRSSSD-AAADRVQVVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAAQLVS 60
Query: 61 TAASPALNPDVVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120
TAASPAL+PD VLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE
Sbjct: 61 TAASPALDPDAVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120
Query: 121 AADGGGDWRCTAAGKSRQWRPLLDTIKEKPANNCGRIDSDLER 164
A+GG +W+CTAAGKSRQWRPLLDTIKEKPAN+C RI+SDLER
Sbjct: 121 TAEGGEEWKCTAAGKSRQWRPLLDTIKEKPANSCERIESDLER 162
BLAST of Chy5G099230 vs. ExPASy TrEMBL
Match:
A0A1S3CC70 (uncharacterized protein LOC103499134 OS=Cucumis melo OX=3656 GN=LOC103499134 PE=4 SV=1)
HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 146/163 (89.57%), Postives = 154/163 (94.48%), Query Frame = 0
Query: 1 MGGCISHRSSSTAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVS 60
MGGC+S RSSS AAADRVQVVHLNGHVQHFHSPITARQVA +PPPP EYFICTAAQLVS
Sbjct: 1 MGGCVSLRSSSD-AAADRVQVVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAAQLVS 60
Query: 61 TAASPALNPDVVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120
TAASPAL+PD VLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE
Sbjct: 61 TAASPALDPDAVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120
Query: 121 AADGGGDWRCTAAGKSRQWRPLLDTIKEKPANNCGRIDSDLER 164
A+GG +W+CTAAGKSRQWRPLLDTIKEKPAN+C RI+SDLER
Sbjct: 121 TAEGGEEWKCTAAGKSRQWRPLLDTIKEKPANSCERIESDLER 162
BLAST of Chy5G099230 vs. ExPASy TrEMBL
Match:
A0A6J1K8V3 (uncharacterized protein LOC111491721 OS=Cucurbita maxima OX=3661 GN=LOC111491721 PE=4 SV=1)
HSP 1 Score: 223.8 bits (569), Expect = 5.3e-55
Identity = 114/162 (70.37%), Postives = 128/162 (79.01%), Query Frame = 0
Query: 1 MGGCISHRSSSTAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVS 60
MG CIS RSSS AAAD +Q+VHLNGHVQHFHSPITA QV G PPPAEYFI TAAQLVS
Sbjct: 1 MGVCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITASQVTGNSPPPAEYFISTAAQLVS 60
Query: 61 TAASPALNPDVVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120
A SPALNPD +LQPGKVYF+LPFSTLHPDVS +DL+SIAR+LTAAAKSA + PPC
Sbjct: 61 LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRP---PPCV 120
Query: 121 AADGGGDWRCTAAGKSRQWRPLLDTIKEKPANNCGRIDSDLE 163
A GG DW+ A KSRQW+P LDTI+EK N + +SDL+
Sbjct: 121 AVGGGNDWKAPVAAKSRQWKPFLDTIQEKAVN---KSESDLQ 156
BLAST of Chy5G099230 vs. ExPASy TrEMBL
Match:
A0A6A2Y6W9 (OSBP(Oxysterol binding protein)-related protein 4B OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111542pilonHSYRG00100 PE=4 SV=1)
HSP 1 Score: 133.3 bits (334), Expect = 9.4e-28
Identity = 78/163 (47.85%), Postives = 102/163 (62.58%), Query Frame = 0
Query: 1 MGGCISHRSSSTA-AAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLV 60
MG C+S S S A+ + V+V+H NGHV+ F PIT +V G P + ++CTAAQL+
Sbjct: 1 MGCCLSSSSCSCKYASPNTVRVIHFNGHVEDFEHPITVSEVIGNLP---KQYLCTAAQLL 60
Query: 61 STAASPALNPDVVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPC 120
S P LNPD LQPG +YF+LPFSTL DVS D+AS+ +RLTA AKS S P
Sbjct: 61 SAGTKP-LNPDAPLQPGHLYFVLPFSTLQDDVSPLDMASVVKRLTARAKSHDGSRRTGPL 120
Query: 121 EAADGGGDWRCTAAGKSRQWRPLLDTIKEKPANNCGRIDSDLE 163
A +GG T G +R W+P+LDTI+E + GR DSD++
Sbjct: 121 SAVNGG----LTRRGTTRSWKPILDTIRE--MSFTGRSDSDIQ 153
BLAST of Chy5G099230 vs. NCBI nr
Match:
XP_011650123.1 (uncharacterized protein LOC105434722 [Cucumis sativus])
HSP 1 Score: 315 bits (808), Expect = 2.95e-108
Identity = 158/164 (96.34%), Postives = 159/164 (96.95%), Query Frame = 0
Query: 1 MGGCISHRSSSTAAAA-DRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLV 60
MGGCISHRSSSTAAAA DRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLV
Sbjct: 1 MGGCISHRSSSTAAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLV 60
Query: 61 STAASPALNPDVVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPC 120
STAASPALNPDVVLQPGKVYFILP STLHPDVSLADLASIARRLTAAAKSAAKSGSLPPC
Sbjct: 61 STAASPALNPDVVLQPGKVYFILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPC 120
Query: 121 EAADGGGDWRCTAAGKSRQWRPLLDTIKEKPANNCGRIDSDLER 163
EAADGG DWRCT AGKSRQWRPLLDTI+EKP NNCGRIDSDLER
Sbjct: 121 EAADGGEDWRCTTAGKSRQWRPLLDTIREKPGNNCGRIDSDLER 164
BLAST of Chy5G099230 vs. NCBI nr
Match:
XP_008460258.1 (PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo] >KAA0031747.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa] >TYK08883.1 DUF4228 domain-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 292 bits (747), Expect = 5.50e-99
Identity = 146/163 (89.57%), Postives = 154/163 (94.48%), Query Frame = 0
Query: 1 MGGCISHRSSSTAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVS 60
MGGC+S RSSS AAA DRVQVVHLNGHVQHFHSPITARQVA +PPPP EYFICTAAQLVS
Sbjct: 1 MGGCVSLRSSSDAAA-DRVQVVHLNGHVQHFHSPITARQVARKPPPPTEYFICTAAQLVS 60
Query: 61 TAASPALNPDVVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120
TAASPAL+PD VLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE
Sbjct: 61 TAASPALDPDAVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120
Query: 121 AADGGGDWRCTAAGKSRQWRPLLDTIKEKPANNCGRIDSDLER 163
A+GG +W+CTAAGKSRQWRPLLDTIKEKPAN+C RI+SDLER
Sbjct: 121 TAEGGEEWKCTAAGKSRQWRPLLDTIKEKPANSCERIESDLER 162
BLAST of Chy5G099230 vs. NCBI nr
Match:
KAE8651677.1 (hypothetical protein Csa_021330 [Cucumis sativus])
HSP 1 Score: 281 bits (720), Expect = 4.02e-95
Identity = 138/143 (96.50%), Postives = 139/143 (97.20%), Query Frame = 0
Query: 21 VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 80
VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF
Sbjct: 3 VVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVSTAASPALNPDVVLQPGKVYF 62
Query: 81 ILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGGDWRCTAAGKSRQWR 140
ILP STLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGG DWRCT AGKSRQWR
Sbjct: 63 ILPLSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCEAADGGEDWRCTTAGKSRQWR 122
Query: 141 PLLDTIKEKPANNCGRIDSDLER 163
PLLDTI+EKP NNCGRIDSDLER
Sbjct: 123 PLLDTIREKPGNNCGRIDSDLER 145
BLAST of Chy5G099230 vs. NCBI nr
Match:
KAG7029841.1 (hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 224 bits (571), Expect = 4.25e-72
Identity = 114/162 (70.37%), Postives = 128/162 (79.01%), Query Frame = 0
Query: 1 MGGCISHRSSSTAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVS 60
MGGCIS RSSS AAAD +Q+VHLNGHVQHFHSPITARQV G PPPAEYFI TAAQLVS
Sbjct: 1 MGGCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITARQVTGSSPPPAEYFISTAAQLVS 60
Query: 61 TAASPALNPDVVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120
A SPALNPD +LQPGKVYF+LPFSTLHPDVS +DL+SIAR+LTAAAKSA + PPC
Sbjct: 61 LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPR----PPCV 120
Query: 121 AADGGGDWRCTAAGKSRQWRPLLDTIKEKPANNCGRIDSDLE 162
A GG W+ KSRQW+P LDTI+EK N + +SDL+
Sbjct: 121 AVGGGDGWKAPTTAKSRQWKPFLDTIQEKAVN---KSESDLQ 155
BLAST of Chy5G099230 vs. NCBI nr
Match:
XP_022996489.1 (uncharacterized protein LOC111491721 [Cucurbita maxima])
HSP 1 Score: 223 bits (569), Expect = 8.86e-72
Identity = 114/162 (70.37%), Postives = 128/162 (79.01%), Query Frame = 0
Query: 1 MGGCISHRSSSTAAAADRVQVVHLNGHVQHFHSPITARQVAGRPPPPAEYFICTAAQLVS 60
MG CIS RSSS AAAD +Q+VHLNGHVQHFHSPITA QV G PPPAEYFI TAAQLVS
Sbjct: 1 MGVCISRRSSSAVAAADTIQLVHLNGHVQHFHSPITASQVTGNSPPPAEYFISTAAQLVS 60
Query: 61 TAASPALNPDVVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAAKSGSLPPCE 120
A SPALNPD +LQPGKVYF+LPFSTLHPDVS +DL+SIAR+LTAAAKSA + PPC
Sbjct: 61 LAVSPALNPDAILQPGKVYFLLPFSTLHPDVSPSDLSSIARKLTAAAKSAPRP---PPCV 120
Query: 121 AADGGGDWRCTAAGKSRQWRPLLDTIKEKPANNCGRIDSDLE 162
A GG DW+ A KSRQW+P LDTI+EK N + +SDL+
Sbjct: 121 AVGGGNDWKAPVAAKSRQWKPFLDTIQEKAVN---KSESDLQ 156
BLAST of Chy5G099230 vs. TAIR 10
Match:
AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 56.6 bits (135), Expect = 2.2e-08
Identity = 38/146 (26.03%), Postives = 70/146 (47.95%), Query Frame = 0
Query: 1 MGGCISHRSSSTAAAADRVQVVHLNGHVQHFHSPITARQV-------AGRPPPPAEYFIC 60
MG C+S + +++ ++V +NG ++ + P+ A QV + + YF+C
Sbjct: 1 MGLCVSVNRNEYVSSSTTAKIVTINGDLREYDVPVLASQVLESESTSSSSSSSSSSYFLC 60
Query: 61 TAAQLVSTAASPALNPDVVLQPGKVYFILPFSTLHPDVSLADLASIARRLTAAAKSAA-- 120
+ L PA+ D +LQ ++YF+LP S +S +D+A++A + + A + AA
Sbjct: 61 NSDSLYYDDFIPAIESDEILQANQIYFVLPISKRQYRLSASDMAALAVKASVAIEKAAGK 120
Query: 121 -----KSGSLPPCEAADGGGDWRCTA 133
+SG + P + D R A
Sbjct: 121 KNRRRRSGRISPVVTLNQANDNRIAA 146
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0LHC0 | 1.3e-82 | 96.34 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060490 PE=4 SV=1 | [more] |
A0A5D3CAJ8 | 1.6e-75 | 89.57 | DUF4228 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A1S3CC70 | 1.6e-75 | 89.57 | uncharacterized protein LOC103499134 OS=Cucumis melo OX=3656 GN=LOC103499134 PE=... | [more] |
A0A6J1K8V3 | 5.3e-55 | 70.37 | uncharacterized protein LOC111491721 OS=Cucurbita maxima OX=3661 GN=LOC111491721... | [more] |
A0A6A2Y6W9 | 9.4e-28 | 47.85 | OSBP(Oxysterol binding protein)-related protein 4B OS=Hibiscus syriacus OX=10633... | [more] |
Match Name | E-value | Identity | Description | |
XP_011650123.1 | 2.95e-108 | 96.34 | uncharacterized protein LOC105434722 [Cucumis sativus] | [more] |
XP_008460258.1 | 5.50e-99 | 89.57 | PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo] >KAA0031747.1 DUF... | [more] |
KAE8651677.1 | 4.02e-95 | 96.50 | hypothetical protein Csa_021330 [Cucumis sativus] | [more] |
KAG7029841.1 | 4.25e-72 | 70.37 | hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022996489.1 | 8.86e-72 | 70.37 | uncharacterized protein LOC111491721 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
AT1G76600.1 | 2.2e-08 | 26.03 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... | [more] |