Chy5G098950 (gene) Cucumber (hystrix) v1

Overview
NameChy5G098950
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH05: 12198287 .. 12200197 (+)
RNA-Seq ExpressionChy5G098950
SyntenyChy5G098950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATGCGTTGATTTCAAGGAAGTAGGCAGGTGGGGGATGGAAAATGCGGAAGAACTAAGGAAAATGGAAGGTGGGTGTGGGAATTTTGGTGTTGAAATGATAGGTAAGGCCTCGGGAAAAGGGAAAGGAGAAGAGGGAGAGAGGATTGTGCAGATAGACGTTGTGAAGAGAAGGAAGAAGAAGAAGGTGGATTGATTCGTTAATGGAATTTGGAAAATGGGTTTTAGTCCAAAAACAACGTGATATTCTTAAAATTATTGAATTATTGTCGTTTAATTGTTTATGGTTTGGATTAGACTTATGAATCTAATCTGTACCACTCTACGTTACTCCCCTATCTCTCCTCTTGCTATTACTTTTCATCCCCTTAAACACTTTAATATCATATTTCTACCACTACTTAATATTTCTCCCTATATTTGAAAAAAAATTAATAAACCACCAAAATAAAATATTTACAAGTTTTTTCAAAGCTTATTTGTGAGATTTAGTTTAGATTTGGATAGGTATCAAATATAAAAATATCTACAAAAATCATATACAAATTTATATTGAAAATCGAATATTTACTAGGATTTAGATTTGACTAATCTAATTAATCACTTTTAAAATTATTAAATATTTTGACAGTTATATTTTTTAAAAAAAAAATTTCAAAAATTTAGCATTTCAACTAAATTTAAAAAATACTTGAAAAATATCCATCAATACCAAAAGCCAATTAGTTTTGATCAAAAAGTGTTTGGACAAAACAAGCCCAAGTCGACCAAGCTCACCATCAAAACTATTGAAGAGTTTTCCTTGAGTTGGGTGATTTATAAAATTTAAACTCACACAGAATTCTCCATTCAGTAAGAGATTTTTGAAGATACAAATTTTTTAATTAATTTGAATTTTAAGATAGTGATTGAACCACGTTTACATAAGTCAACATAAATACAAGTTGAACTTCATAAAACATGTCTCCTTACAATTTTTGAAGTAACTAATATGGAGTAGACCTATGATAAAGCTTTATTAAAATGTATAAATATATTTATTTTTAAATATTATATATAAATATGTAATTAGAAATAAGAAAAATTGACCAAATATAGAAAATTCTCAAATTATATTACTTTCTATGGTTCATTTGGATATATTTAAAAATATTCATATTATTTAATCTTGAAAGGATGCAAAATAAAATATAAAATTAGATAAGAATATGTTTGAGGATGCATTATTGTTTTTACTTTATCAAATGTGAATTTGAGTATCCTCATTTTGCAATTTTTGTTAAGATAAAGTGACAATTTATACATAATTTATTAAACTTAGGAGAAAAGTATAAATCTTAGGATTTGAAAACAATAAATTTAAATTGAATAGACTTCATAAAAAGAGAATATACCTAGAATTTGAAAACATTCCAGCCACTCCATCCTCATCTAATATTGAAAAGATACATAATTTAATCAAATAAATAATAATAGAAATAAGATTCCTAAAAACAAGAGTACAAAGACCATATCATGATCTTATTCAACTAAATCCATCTCAACTTAAATTGTATTAAATCATTTTGTTACATATTGGATACTATATATAAATTTTCAAAATGATTATAACATAAACAAATACAATTTAGACCTTAAGATTTAGTGTTTGTTTAACTATTTGATCCATTGTAAAAAGATCAATAACTAACTAAGAATTAATTTTGTGGCGTAACCTGGTCGGAACATTTATGAATATAAAAAATAATTTAGAATTTGTTTATGAAAGAAAATTGTAATGGATAACAAAAACAAATATAACAAAATTTTTAAATTTGATTACTATTCTTTTTTTTCTCATTCCAATTTTACTTTGGTTTGTGTACAACTGAGACACTTTGCATTGATATTTATTTAGTATATCAGTTAG

mRNA sequence

ATGAAATGCGTTGATTTCAAGGAAGTAGGCAGGTGGGGGATGGAAAATGCGGAAGAACTAAGGAAAATGGAAGGTGGGTGTGGGAATTTTGGTGTTGAAATGATAGGTAAGGCCTCGGGAAAAGGGAAAGGAGAAGAGGGAGAGAGGATTGTGCAGATAGACGTTGTGAAGAGAAGGAAGAAGAAGAAGTATATCAGTTAG

Coding sequence (CDS)

ATGAAATGCGTTGATTTCAAGGAAGTAGGCAGGTGGGGGATGGAAAATGCGGAAGAACTAAGGAAAATGGAAGGTGGGTGTGGGAATTTTGGTGTTGAAATGATAGGTAAGGCCTCGGGAAAAGGGAAAGGAGAAGAGGGAGAGAGGATTGTGCAGATAGACGTTGTGAAGAGAAGGAAGAAGAAGAAGTATATCAGTTAG

Protein sequence

MKCVDFKEVGRWGMENAEELRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRKKKKYIS*
Homology
[Close]
BLAST of Chy5G098950 vs. ExPASy TrEMBL
Match: A0A5D3CU33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2754G00120 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-25
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MKCVDFKEVGRWGMENAEELRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK 60
          MKCVDFK VGRWGMENAEELRKMEGGCGNFGVEM+GKASGKGKGEEGERIVQIDVVKRRK
Sbjct: 1  MKCVDFKGVGRWGMENAEELRKMEGGCGNFGVEMMGKASGKGKGEEGERIVQIDVVKRRK 60

Query: 61 KKK 64
          KKK
Sbjct: 61 KKK 63

[Close]
BLAST of Chy5G098950 vs. ExPASy TrEMBL
Match: A0A0A0LKD2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062670 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.4e-25
Identity = 61/65 (93.85%), Postives = 62/65 (95.38%), Query Frame = 0 

Query: 1  MKCVDFKEVGRWGMENAEELRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK 60
          MKCVDFKEVGRWGMENAE  RKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK
Sbjct: 1  MKCVDFKEVGRWGMENAEAPRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK 60

Query: 61 KKKYI 66
          KKK +
Sbjct: 61 KKKKV 65

[Close]
BLAST of Chy5G098950 vs. NCBI nr
Match: KAA0047568.1 (hypothetical protein E6C27_scaffold115G00300 [Cucumis melo var. makuwa] >TYK14962.1 hypothetical protein E5676_scaffold2754G00120 [Cucumis melo var. makuwa])

HSP 1 Score: 125 bits (315), Expect = 3.65e-36
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0 

Query: 1  MKCVDFKEVGRWGMENAEELRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK 60
          MKCVDFK VGRWGMENAEELRKMEGGCGNFGVEM+GKASGKGKGEEGERIVQIDVVKRRK
Sbjct: 1  MKCVDFKGVGRWGMENAEELRKMEGGCGNFGVEMMGKASGKGKGEEGERIVQIDVVKRRK 60

Query: 61 KKK 63
          KKK
Sbjct: 61 KKK 63

[Close]
BLAST of Chy5G098950 vs. NCBI nr
Match: KGN61192.1 (hypothetical protein Csa_006000 [Cucumis sativus])

HSP 1 Score: 125 bits (315), Expect = 3.75e-36
Identity = 61/66 (92.42%), Postives = 62/66 (93.94%), Query Frame = 0 

Query: 1  MKCVDFKEVGRWGMENAEELRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK 60
          MKCVDFKEVGRWGMENAE  RKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK
Sbjct: 1  MKCVDFKEVGRWGMENAEAPRKMEGGCGNFGVEMIGKASGKGKGEEGERIVQIDVVKRRK 60

Query: 61 KKKYIS 66
          KKK + 
Sbjct: 61 KKKKVD 66

The following BLAST results are available for this feature:
BLAST of Chy5G098950 vs.
Match NameE-valueIdentityDescription
BLAST of Chy5G098950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CU331.0e-2596.83Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LKD21.4e-2593.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G062670 PE=4 SV=1[more]
BLAST of Chy5G098950 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0047568.13.65e-3696.83hypothetical protein E6C27_scaffold115G00300 [Cucumis melo var. makuwa] >TYK1496... [more]
KGN61192.13.75e-3692.42hypothetical protein Csa_006000 [Cucumis sativus][more]
BLAST of Chy5G098950 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy5G098950.1Chy5G098950.1mRNA