Chy5G098600 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCGAGTTCCTCGAATTCGCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAGCCGGAATGTGTTTTTGCGCCGTATTTTCCACCGGATCAGCCTCAGAAATTCGCAAATGTTCATAAGGTATTCGGAGCTAGTAATGTAACAAAACTTCTCAACGAATTGCATCCTCACCAGAGAGAAGACGCTGTCAATTCGCTCGCTTACGAAGCCGATATGCGCCTTCGTGACCCTGTCTATGGCTGTGTTGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACTTGCGCAAAATCTGAACTCTCCAAATATCAAAACCTAGGGATTGGTAACCACGCTACCCTGATTTCGCCGCCTTCCACCCTTTCTACCGTCCCTCATGGACAGAGAAACCACCAGCCGGCGTTCAATTTTGCTCGAGATCAACCGCATAGTCTTTATCACGACCAATTTTTCCCTCGAGATCAACAACAGATGATGCTACGACGGAACTTCGACGGCGGTAGCAACTACGACGGACTTTTGGCCGTTAATGTCACCGCAAGTATCGGTAACCTCAGCCACCAGTTGCAGCAAACTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAGGGTTTCGTTTTGCTTCCTTTTTCTTTTTCTTTTTTCTTTTTTTTTTAATGAAAAATCATAAACTGTTGGAGAGAAATCATATATAGTTAATTTTCCTGCTAATTTATATATAACAATAAAATTAATTTAATCAAATGTTATCTATTTTTGTAATGATTATTGTGGTCCTAATTTCTCTTCCACTACCTAAATTTCAGTTTTCTTTATTTAGTTAAATTATATGTTTTTGTGTTCATTCAATTAATTAAATTTTATAAATATTACTCTTTCTTCTTTTAAATTTTAATCATTTTTTGTTTAATATAAACTCAATTTTCTTTTTTCTTTTTTTTTTTTAAAAAACATTAATTAATCTGTAATTATTAGAACTCTAAACTTTCTATTTGTAATTATGAATTAAACCGATGTATTGAATCGTTCTAAATTAGCTTCTTCACATTATTATAGTAATTATTATTTTAACAAGCTAAAATATAATACTATAACTTGACTTCAATATTACATTTTATTAATTAAAGTTTAGAAATACTACATGTCATCACTTAAGAAAAAAATATTTTTGCAAAAAAAGATCAGTTTATTTAAATTAATTTTGATAAAAAAAATTAAGATACTTTAATATTTTAAAAGGACGTTTTTTTAATAATACATTTCAGTATGTATAAATACATGCTATATATGTAGCATGAAATTTAAAAGTTATTTATTGAAAGGTTTTGATTTTGAAATTTTGCATAAATATTTTTGATAATTTTTCTATTTGGAATAATTTCTTTTTATGTTATAATTGACATAATTTTGGTAAGTTATTGTTTAACATAAAATGATAGAGACAATGATTATAGAAGAGTTTGATAGGTATAAATATAAATTTTTAAGTATATGATAAGTGGGGTATAGAGATCTAAATTACATAAATTTCAATTACTTTTAATAAACTTCGATTGAGAATGACCAAATAACCCTTGATTTAGGTGTTAAATTTATAAAGGAAAAGAAAGAAATGATGGGTAAATTTGGGTGAGAATAAAAGTGTGTAAGTATTCATTATTATTCTTTTTGTTTGGTACATAATATTAATGATATTACTGTTTTAACCATGTTTCTTTCTGTTGGCTCAAATGATGCTTCAATAAATGCATCATATAGCCCTAGGTAAAGCAGGTTACTATTGGTACTTATTGTTTATTTCTATTTTGTACCATTAATTCCATTAAATTGCTGTTTTAGTCCTTTCATTTTTTTCTACTACTACAATTGCCAGTTGATAGATTCGACTTCCATTTCTAAACCCATAGGTTATGATCATTAACTCAAACTTAGTTTTACCATTTAAATGTTGTATTATATCTCAATTAAATCTTATAGGATCGAAATATATATGAACTTCCTAAATTTAATTAATTTTTTATAGTTTGAAAAAACGTTAAATTTTAGTCATCTTATTTTAAAAATTTTATTTGAGAATAAAACTCGCAAGAAATAGTCCTAGGGTTTGGGTTGTTTAAGAAAGTTTGAAATTAAATTATAATGATACGGCAATTTAACCAATATTATATATGAATTAGTTAAAAATACCAATACCTTCTATATTGAAATTTTGTTTAATTTTATTAGGTATATTTTTAAATATTAAATTTTAATTCTTCTACTCTCAACAATTCTTTTAACATTTTAATAAAATTTGAAAGCATGTCCATTTTGTTTTTGTTTACAAAAAGAAGTAGTGTTATTATTTATCCAAATTCGGTGATAGATGATTTTGCATTACTAAATTTAAGATTTATTGGACGTAGCTCGTCTTTTTTTAGAGAGGTGGTTCTTCTCAAACACCTACAAATAATTTGCTATTTTTTTCATTGCTTTCTTAATGGTCTAGTTTGTCAATCTTTGTCTACTGTGATAATGTTTATATTTTTTTTGTTTTTGTTTTTGCTTTTCAAAAAAGATGAATGAGCAAAAAACTTGTTTGAATCTTTTTTTTCTAGTTTCTCGTTTATTTTTTTTTCTCTCTTTCTAAAATACTTGAAAGAAATTATCAAAAACTTATATTATCTAATACAAACTAGTTTTTGATGCAAAATTGACAAGAATAACAAAAATGTTTCTATTTTGGAATATTTTTTCTCACTTGAGATCTTCGTCCAAAATCATGTCTGACCTAAATCCAACTCAATCACATTGCTATAAACAAATGTTGTGTTAGAAAAGATCAAAATATACATATTGTCAAAATGAACGAAGTTTAATGGTCATTCCCTTTGTTCCAGCGGTGTTCAAAAAACTTAGAGACACAAAATATTCAATTGCCTCTGGCCAAAGCTTCGCAACAAATATAATATGTACACATATGTTATTAACTTATTTAGATTGGGTTGAGTTTCAAACAAATAAAAATTTTATAAATTAGATTAGCTCACGAATTCACCAAAAATAACCCAAGAGGTTATTATTAATTTAAAAAAATATGTCCTCTCTACCATACAACTAAATGTGAACATATTTTTTTTACTATTTTTTCTATTTAATAATTTATTTTCCAAAAACTCAACTAATAATATAAAGGGACATTTTAAAAAATAGCAAAATAAATTAAAATAGTTACAAGCTATAGCAAAATTTTGGATTCTATCACTGATAGTCTTCTATCACTATAGCATATCAATGACTATCAGTGATAGAATTTGCTATAGGTTGTATATATTTTGTAAAATCTACCATTTTAAAAATTTTCTTAATATTAAATTGAAATTTTATTATTTACTTAATTTAATATATAAAAATAATTAAATTAATTTTATCGTATTAACATTTTAGTTGTTTATAGAAAAAAATTAAATAAACTATTGAATAATTCGAACCAACTTAACCTAAATATTTTCTAATTGAGTTGGATTAGTTATTGGAATATTTAGAGTAAAAGAAACCATCTTGCAAACTTAATTTAATATATGTCCACAATTTAAAACATTTTACTCATTAGATTTTTTATGAAATGTTACACATTTTTAACCTTAGACTTAAGTTTGACCCAATTATGGCAAATTCTTTTCTTTTTAATTTCACTCCCTAATTTTAGTTCCTTCCATAGTTATTTTTTTTTTAAAAAAATTACGAAATGCAAAATATTTTAAATGACTGTTTTTTTAAAGAAAAAAATAGTTTAAACTATTGATACAATGGATTTACTTTTTTTAAGGTTTGTTTAACACCTTGTCATTTTGAAGTTTTAGGAAGAGAAGATTTAAATACACCACTTTATATTTCGTAGAACATATCCATCATAATCAATAATTTGATCAAACCTTAAGGATCCAAATCGTCTAAGAGATATGGCAACCCAAAAGCTTGCTACAATATCAATTGTTGTTTTGATGATATTCGCATGTATTGTATCAACAAGTATGCTCTTAACGACTCTTAACTTCTCTAATTCCATAAAATTATTTTTGCTAGAACAATGTTTTAAACAATGTTATTTTTGGTAATATGGCAGCGAAAGGAGACGTTTTGAATATGCATTGTGTTCGACCATGCTCTGATACTTCTGACGACGAGTCATGTTATAATGATTGCATCCGAGAGAATCTTGGTGCTGCGTTTTGTTACCCAAAGCTACCAAGCACTGATAAAGATTGCTGCTGCAATGTATAA ATGGCTTCGAGTTCCTCGAATTCGCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAGCCGGAATGTGTTTTTGCGCCGTATTTTCCACCGGATCAGCCTCAGAAATTCGCAAATGTTCATAAGGTATTCGGAGCTAGTAATGTAACAAAACTTCTCAACGAATTGCATCCTCACCAGAGAGAAGACGCTGTCAATTCGCTCGCTTACGAAGCCGATATGCGCCTTCGTGACCCTGTCTATGGCTGTGTTGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACTTGCGCAAAATCTGAACTCTCCAAATATCAAAACCTAGGGATTGGTAACCACGCTACCCTGATTTCGCCGCCTTCCACCCTTTCTACCGTCCCTCATGGACAGAGAAACCACCAGCCGGCGTTCAATTTTGCTCGAGATCAACCGCATAGTCTTTATCACGACCAATTTTTCCCTCGAGATCAACAACAGATGATGCTACGACGGAACTTCGACGGCGGTAGCAACTACGACGGACTTTTGGCCGTTAATGTCACCGCAAGTATCGGTAACCTCAGCCACCAGTTGCAGCAAACTCGCGCCGCCGCCGGAGACGATCGTCGCGCGAAAGGAGACGTTTTGAATATGCATTGTGTTCGACCATGCTCTGATACTTCTGACGACGAGTCATGTTATAATGATTGCATCCGAGAGAATCTTGGTGCTGCGTTTTGTTACCCAAAGCTACCAAGCACTGATAAAGATTGCTGCTGCAATGTATAA ATGGCTTCGAGTTCCTCGAATTCGCCCTGTGCAGCCTGCAAATTTCTCCGGCGAAAATGCCAGCCGGAATGTGTTTTTGCGCCGTATTTTCCACCGGATCAGCCTCAGAAATTCGCAAATGTTCATAAGGTATTCGGAGCTAGTAATGTAACAAAACTTCTCAACGAATTGCATCCTCACCAGAGAGAAGACGCTGTCAATTCGCTCGCTTACGAAGCCGATATGCGCCTTCGTGACCCTGTCTATGGCTGTGTTGGCGTAATTTCTCTGCTTCAACACCAACTCTGTAAACTCCAAATGGATCTCACTTGCGCAAAATCTGAACTCTCCAAATATCAAAACCTAGGGATTGGTAACCACGCTACCCTGATTTCGCCGCCTTCCACCCTTTCTACCGTCCCTCATGGACAGAGAAACCACCAGCCGGCGTTCAATTTTGCTCGAGATCAACCGCATAGTCTTTATCACGACCAATTTTTCCCTCGAGATCAACAACAGATGATGCTACGACGGAACTTCGACGGCGGTAGCAACTACGACGGACTTTTGGCCGTTAATGTCACCGCAAGTATCGGTAACCTCAGCCACCAGTTGCAGCAAACTCGCGCCGCCGCCGGAGACGATCGTCGCGCGAAAGGAGACGTTTTGAATATGCATTGTGTTCGACCATGCTCTGATACTTCTGACGACGAGTCATGTTATAATGATTGCATCCGAGAGAATCTTGGTGCTGCGTTTTGTTACCCAAAGCTACCAAGCACTGATAAAGATTGCTGCTGCAATGTATAA MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQMMLRRNFDGGSNYDGLLAVNVTASIGNLSHQLQQTRAAAGDDRRAKGDVLNMHCVRPCSDTSDDESCYNDCIRENLGAAFCYPKLPSTDKDCCCNV* Homology
BLAST of Chy5G098600 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.0e-65 Identity = 144/216 (66.67%), Postives = 159/216 (73.61%), Query Frame = 0
BLAST of Chy5G098600 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 7.2e-51 Identity = 108/185 (58.38%), Postives = 124/185 (67.03%), Query Frame = 0
BLAST of Chy5G098600 vs. ExPASy Swiss-Prot
Match: A1YKY7 (Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 5.1e-49 Identity = 103/182 (56.59%), Postives = 123/182 (67.58%), Query Frame = 0
BLAST of Chy5G098600 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.4e-48 Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0
BLAST of Chy5G098600 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 7.4e-48 Identity = 90/112 (80.36%), Postives = 99/112 (88.39%), Query Frame = 0
BLAST of Chy5G098600 vs. ExPASy TrEMBL
Match: A0A0A0LML7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=3 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 3.0e-116 Identity = 210/216 (97.22%), Postives = 210/216 (97.22%), Query Frame = 0
BLAST of Chy5G098600 vs. ExPASy TrEMBL
Match: A0A1S3B5A0 (LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=3 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 1.9e-115 Identity = 209/218 (95.87%), Postives = 209/218 (95.87%), Query Frame = 0
BLAST of Chy5G098600 vs. ExPASy TrEMBL
Match: A0A5A7TVS1 (LOB domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G001440 PE=3 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 2.5e-115 Identity = 209/219 (95.43%), Postives = 209/219 (95.43%), Query Frame = 0
BLAST of Chy5G098600 vs. ExPASy TrEMBL
Match: A0A6J1D6T8 (LOB domain-containing protein 6 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111018161 PE=3 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 3.2e-102 Identity = 190/216 (87.96%), Postives = 193/216 (89.35%), Query Frame = 0
BLAST of Chy5G098600 vs. ExPASy TrEMBL
Match: A0A6J1D9K0 (LOB domain-containing protein 6 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018161 PE=3 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 3.2e-102 Identity = 190/216 (87.96%), Postives = 193/216 (89.35%), Query Frame = 0
BLAST of Chy5G098600 vs. NCBI nr
Match: XP_004152887.1 (protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >XP_011648980.1 protein ASYMMETRIC LEAVES 2 [Cucumis sativus] >KGN61226.1 hypothetical protein Csa_006748 [Cucumis sativus]) HSP 1 Score: 427 bits (1098), Expect = 6.65e-150 Identity = 209/212 (98.58%), Postives = 209/212 (98.58%), Query Frame = 0
BLAST of Chy5G098600 vs. NCBI nr
Match: XP_008441920.1 (PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441921.1 PREDICTED: LOB domain-containing protein 6 [Cucumis melo] >XP_008441922.1 PREDICTED: LOB domain-containing protein 6 [Cucumis melo]) HSP 1 Score: 424 bits (1091), Expect = 8.34e-149 Identity = 208/214 (97.20%), Postives = 208/214 (97.20%), Query Frame = 0
BLAST of Chy5G098600 vs. NCBI nr
Match: KAA0047653.1 (LOB domain-containing protein 6 [Cucumis melo var. makuwa]) HSP 1 Score: 424 bits (1090), Expect = 1.23e-148 Identity = 208/215 (96.74%), Postives = 208/215 (96.74%), Query Frame = 0
BLAST of Chy5G098600 vs. NCBI nr
Match: XP_038889590.1 (protein ASYMMETRIC LEAVES 2 isoform X2 [Benincasa hispida]) HSP 1 Score: 410 bits (1055), Expect = 2.37e-143 Identity = 201/212 (94.81%), Postives = 205/212 (96.70%), Query Frame = 0
BLAST of Chy5G098600 vs. NCBI nr
Match: XP_038889589.1 (protein ASYMMETRIC LEAVES 2 isoform X1 [Benincasa hispida]) HSP 1 Score: 410 bits (1055), Expect = 4.07e-143 Identity = 201/212 (94.81%), Postives = 205/212 (96.70%), Query Frame = 0
BLAST of Chy5G098600 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 251.5 bits (641), Expect = 7.3e-67 Identity = 144/216 (66.67%), Postives = 159/216 (73.61%), Query Frame = 0
BLAST of Chy5G098600 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 251.5 bits (641), Expect = 7.3e-67 Identity = 144/216 (66.67%), Postives = 159/216 (73.61%), Query Frame = 0
BLAST of Chy5G098600 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 251.5 bits (641), Expect = 7.3e-67 Identity = 144/216 (66.67%), Postives = 159/216 (73.61%), Query Frame = 0
BLAST of Chy5G098600 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 251.5 bits (641), Expect = 7.3e-67 Identity = 144/216 (66.67%), Postives = 159/216 (73.61%), Query Frame = 0
BLAST of Chy5G098600 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 179.5 bits (454), Expect = 3.5e-45 Identity = 85/114 (74.56%), Postives = 98/114 (85.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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