Chy5G097310 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G097310
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Protein of unknown function, DUF538
Location	chrH05: 8799822 .. 8801053 (+)
RNA-Seq Expression	Chy5G097310
Synteny	Chy5G097310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAATAGCTTTTAAGATCCTGGCCAAGTAAGGAGCTTACTCCAAGGTAGGTCTAAGAGAACAGTTTTTTGGGTAGTTTGTAGGCATTGACCTAGTTTCAATAGCAATATTATGCACCAAATGTTGTCAAATGAAGTGAAGGACAAGAGAGGAAACTCAATGAGCTTCTCATTTTTCATTTCTTATCCACGTATAGAAAAAAGAAATATCGAATGGGATACCGTTTGATCATTTTTTAAAAAGAAAATAATAAATAAAAAGAAGAGTAAGTTATATATGGTTAAAAAAGTACTTTTGTTTTAGCTTAGTTATGTAGTTAACCATTGATGGTTCATTGGTTCCTCTAGTTGGCAGAAGTTATCATGATTTGTGGGTGTTGGATCATGAGAGCTCTTAGGTCTTCATATTTCGAATTACATTATATATTTAGGAAAATAATAAGAAAAATTAGTTTTAGGTTTAAAAGAAACGCCCTTTTACTAATTTTATTGTTTTGTTTTTTTAAAAGAGAGTTTTTAAATTTAAAAGTCACTCGCTGCTTTGAAAGCGCGTGTGGAGGGATGAATACCCGAAAAGAAGAGTGAAACGCAAACCTCAAAAAATCCCATTCCTTCTCCTTCTCCTTCTTCTCTCTTCTCGCGCCGTTCTTCTCTGCTACCTTCTTCAACCTCAAAATTCCCCATTTCCTCTCCGTTTTCTTCTCCCTTTTTCTTTTCCGTCATGACCCTTTTTCTCTTTTCCCCTTTTTTCATCATTCTCTTCTTCTTTGCTTCCCCTCTCATCACCGCTTCTGACCCATCCACCATTTACGACCATCTCCACCTTTACGGCCTCCCCATCGGCCTCCTTCCAAAGAATATCACTAAATTTTCAATTGATTCTTCCACCGGCCGTTTCCAGGTCTTCCTTGATCAACCCTGTAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCTGGCAGGCTCTCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCCTCCCAAGAGCTCTTTCTTTGGTTCCCTGTTAAGGGAATTCGTGTAGATTTGTCCACTTCTGGTTTAATTCATTTCGACGTCGGCGTTGTTGACAAGCAATTCTCTCTTTCCCTCTTTGAGTCCCCCATTGATTGCACGGCGGCTGATCCGGTTGATCGATCCTTCGCCTTCAATGCTGCCTCTCTTGATATGGATCGCCCTGTTTCGACGGTACGTTAG

mRNA sequence

ATGTCAATAGCTTTTAAGATCCTGGCCAAGCTCTCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCCTCCCAAGAGCTCTTTCTTTGGTTCCCTGTTAAGGGAATTCGTGTAGATTTGTCCACTTCTGGTTTAATTCATTTCGACGTCGGCGTTGTTGACAAGCAATTCTCTCTTTCCCTCTTTGAGTCCCCCATTGATTGCACGGCGGCTGATCCGGTTGATCGATCCTTCGCCTTCAATGCTGCCTCTCTTGATATGGATCGCCCTGTTTCGACGGTACGTTAG

Coding sequence (CDS)

ATGTCAATAGCTTTTAAGATCCTGGCCAAGCTCTCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCCTCCCAAGAGCTCTTTCTTTGGTTCCCTGTTAAGGGAATTCGTGTAGATTTGTCCACTTCTGGTTTAATTCATTTCGACGTCGGCGTTGTTGACAAGCAATTCTCTCTTTCCCTCTTTGAGTCCCCCATTGATTGCACGGCGGCTGATCCGGTTGATCGATCCTTCGCCTTCAATGCTGCCTCTCTTGATATGGATCGCCCTGTTTCGACGGTACGTTAG

Protein sequence

MSIAFKILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFESPIDCTAADPVDRSFAFNAASLDMDRPVSTVR*

Homology

[Close]

BLAST of Chy5G097310 vs. ExPASy TrEMBL
Match: A0A0A0LN19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G99990 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.6e-38
Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 5   FKILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 64
           F +  +LSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES
Sbjct: 102 FNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 161

Query: 65  PIDCTAADPVDRSFAFNAASLDMDRPVST 94
           PIDCTAADPVDRS AFNAASLDMDRP+ST
Sbjct: 162 PIDCTAADPVDRSIAFNAASLDMDRPLST 190

[Close]

BLAST of Chy5G097310 vs. ExPASy TrEMBL
Match: A0A5D3DFD2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold333G00250 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 5.0e-37
Identity = 80/91 (87.91%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 5   FKILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 64
           F +  +LSYGQIAELAGISSQELFLWFPVKGIRVDLS+SG+IHFDVGVVDKQFSLSLFES
Sbjct: 80  FNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSSSGVIHFDVGVVDKQFSLSLFES 139

Query: 65  PIDCTAADPVDRSFAFNAASLDMDRPVSTVR 96
           P DCTAADPVD+SFAFNAASLD DRP STVR
Sbjct: 140 PPDCTAADPVDQSFAFNAASLDTDRPFSTVR 170

[Close]

BLAST of Chy5G097310 vs. ExPASy TrEMBL
Match: A0A1S3B435 (uncharacterized protein LOC103485796 OS=Cucumis melo OX=3656 GN=LOC103485796 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.5e-36
Identity = 78/89 (87.64%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 5   FKILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 64
           F +  +LSYGQIAELAGISSQELFLWFPVKGIRVDLS+SG+IHFDVGVVDKQFSLSLFES
Sbjct: 80  FNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSSSGVIHFDVGVVDKQFSLSLFES 139

Query: 65  PIDCTAADPVDRSFAFNAASLDMDRPVST 94
           P DCTAADPVD+SFAFNAASLD DRP ST
Sbjct: 140 PPDCTAADPVDQSFAFNAASLDTDRPFST 168

[Close]

BLAST of Chy5G097310 vs. ExPASy TrEMBL
Match: A0A6J1K9Y4 (uncharacterized protein LOC111492997 OS=Cucurbita maxima OX=3661 GN=LOC111492997 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.4e-31
Identity = 70/88 (79.55%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 5   FKILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 64
           F +  +LSYGQIAELAGISSQELFLWFPVKGI VDLS+SGLIHFDVGVVDKQFSLSLFES
Sbjct: 74  FNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQFSLSLFES 133

Query: 65  PIDCTAADPVDRSFAFNAASLDMDRPVS 93
           P DCTAADPVD SF  N AS+D++  +S
Sbjct: 134 PPDCTAADPVDHSFELNGASVDLNVAIS 161

[Close]

BLAST of Chy5G097310 vs. ExPASy TrEMBL
Match: A0A6J1GC72 (uncharacterized protein LOC111452833 OS=Cucurbita moschata OX=3662 GN=LOC111452833 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.4e-31
Identity = 70/88 (79.55%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 5   FKILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 64
           F +  +LSYGQIAELAGISSQELFLWFPVKGI VDLS+SGLIHFDVGVVDKQFSLSLFES
Sbjct: 74  FNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQFSLSLFES 133

Query: 65  PIDCTAADPVDRSFAFNAASLDMDRPVS 93
           P DCTAADPVD SF  N AS+D++  +S
Sbjct: 134 PPDCTAADPVDHSFELNGASVDLNVAIS 161

[Close]

BLAST of Chy5G097310 vs. NCBI nr
Match: XP_004138912.1 (uncharacterized protein LOC101222871 [Cucumis sativus] >KGN61366.1 hypothetical protein Csa_005959 [Cucumis sativus])

HSP 1 Score: 167 bits (423), Expect = 3.37e-50
Identity = 82/89 (92.13%), Postives = 85/89 (95.51%), Query Frame = 0


Query: 5   FKILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 64
           F +  +LSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES
Sbjct: 102 FNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 161

Query: 65  PIDCTAADPVDRSFAFNAASLDMDRPVST 93
           PIDCTAADPVDRS AFNAASLDMDRP+ST
Sbjct: 162 PIDCTAADPVDRSIAFNAASLDMDRPLST 190

[Close]

BLAST of Chy5G097310 vs. NCBI nr
Match: TYK22168.1 (uncharacterized protein E5676_scaffold333G00250 [Cucumis melo var. makuwa])

HSP 1 Score: 163 bits (412), Expect = 5.11e-49
Identity = 80/91 (87.91%), Postives = 85/91 (93.41%), Query Frame = 0


Query: 5   FKILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 64
           F +  +LSYGQIAELAGISSQELFLWFPVKGIRVDLS+SG+IHFDVGVVDKQFSLSLFES
Sbjct: 80  FNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSSSGVIHFDVGVVDKQFSLSLFES 139

Query: 65  PIDCTAADPVDRSFAFNAASLDMDRPVSTVR 95
           P DCTAADPVD+SFAFNAASLD DRP STVR
Sbjct: 140 PPDCTAADPVDQSFAFNAASLDTDRPFSTVR 170

[Close]

BLAST of Chy5G097310 vs. NCBI nr
Match: XP_008441719.1 (PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo])

HSP 1 Score: 159 bits (403), Expect = 1.78e-47
Identity = 78/89 (87.64%), Postives = 83/89 (93.26%), Query Frame = 0


Query: 5   FKILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 64
           F +  +LSYGQIAELAGISSQELFLWFPVKGIRVDLS+SG+IHFDVGVVDKQFSLSLFES
Sbjct: 80  FNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLSSSGVIHFDVGVVDKQFSLSLFES 139

Query: 65  PIDCTAADPVDRSFAFNAASLDMDRPVST 93
           P DCTAADPVD+SFAFNAASLD DRP ST
Sbjct: 140 PPDCTAADPVDQSFAFNAASLDTDRPFST 168

[Close]

BLAST of Chy5G097310 vs. NCBI nr
Match: XP_038891231.1 (uncharacterized protein LOC120080586 [Benincasa hispida])

HSP 1 Score: 148 bits (374), Expect = 4.77e-43
Identity = 73/88 (82.95%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 5   FKILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 64
           F +  +LSYGQIAELAGISSQELFLWFPVKGIRVDL TSG+IHFDVGVVDKQFSLSLFES
Sbjct: 82  FNVSGRLSYGQIAELAGISSQELFLWFPVKGIRVDLPTSGVIHFDVGVVDKQFSLSLFES 141

Query: 65  PIDCTAADPVDRSFAFNAASLDMDRPVS 92
           P DCTAADPVD+SF FN ASLD   P S
Sbjct: 142 PPDCTAADPVDQSFVFNGASLDFVGPFS 169

[Close]

BLAST of Chy5G097310 vs. NCBI nr
Match: KAG7036819.1 (hypothetical protein SDJN02_00439, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144 bits (363), Expect = 1.61e-41
Identity = 70/88 (79.55%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 5   FKILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 64
           F +  +LSYGQIAELAGISSQELFLWFPVKGI VDLS+SGLIHFDVGVVDKQFSLSLFES
Sbjct: 74  FNVSGRLSYGQIAELAGISSQELFLWFPVKGIHVDLSSSGLIHFDVGVVDKQFSLSLFES 133

Query: 65  PIDCTAADPVDRSFAFNAASLDMDRPVS 92
           P DCTAADPVD SF  N AS+D++  +S
Sbjct: 134 PPDCTAADPVDHSFELNGASVDLNVAIS 161

[Close]

BLAST of Chy5G097310 vs. TAIR 10
Match: AT5G16380.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 95.9 bits (237), Expect = 1.9e-20
Identity = 49/86 (56.98%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 5   FKILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFES 64
           + I   LS G+I  L+G++ +ELFLWF VKGI VD  +SGLIHFDVGV DKQ SLSLFES
Sbjct: 81  YNISGVLSDGRIGNLSGVTQKELFLWFAVKGIHVDPQSSGLIHFDVGVADKQLSLSLFES 140

Query: 65  PIDCTAADPVDRSFAFNAASLDMDRP 91
           P DCTAA+   R       ++D+ RP
Sbjct: 141 PRDCTAAESQPR-------AVDLSRP 159

[Close]

BLAST of Chy5G097310 vs. TAIR 10
Match: AT3G07470.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 91.7 bits (226), Expect = 3.5e-19
Identity = 43/62 (69.35%), Postives = 53/62 (85.48%), Query Frame = 0


Query: 7   ILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFESPI 66
           I   +   QI++L+GIS+QELFLWFPVKGIRVD+ +SGLI+FDVGVV KQ+SLSLFE+P 
Sbjct: 83  ITGTIGSAQISDLSGISAQELFLWFPVKGIRVDVPSSGLIYFDVGVVRKQYSLSLFETPR 142

Query: 67  DC 69
           DC
Sbjct: 143 DC 144

[Close]

BLAST of Chy5G097310 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 87.8 bits (216), Expect = 5.1e-18
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 11  LSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFESPIDCTA 70
           + Y QI +L+GIS+QELFLW  VKGIRVD+ +SGLI FDVGV+ KQ+SLSLFE+P DC A
Sbjct: 86  IGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDCVA 145

[Close]

BLAST of Chy5G097310 vs. TAIR 10
Match: AT3G07460.2 (Protein of unknown function, DUF538 )

HSP 1 Score: 87.8 bits (216), Expect = 5.1e-18
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 0


Query: 11  LSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFESPIDCTA 70
           + Y QI +L+GIS+QELFLW  VKGIRVD+ +SGLI FDVGV+ KQ+SLSLFE+P DC A
Sbjct: 86  IGYAQIRDLSGISAQELFLWLQVKGIRVDVPSSGLIFFDVGVLRKQYSLSLFETPRDCVA 145

[Close]

BLAST of Chy5G097310 vs. TAIR 10
Match: AT1G61667.1 (Protein of unknown function, DUF538 )

HSP 1 Score: 72.0 bits (175), Expect = 2.9e-13
Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 7   ILAKLSYGQIAELAGISSQELFLWFPVKGIRVDLSTSGLIHFDVGVVDKQFSLSLFESPI 66
           I A LSYG +  L G++ +ELFLW PVKGI V+  +SGL+ FD+GV  KQ S SLFE P 
Sbjct: 74  IKANLSYGGLVGLEGLTQEELFLWLPVKGIAVNDPSSGLVLFDIGVAHKQISRSLFEDPP 133

Query: 67  DC 69
            C
Sbjct: 134 VC 135

The following BLAST results are available for this feature:

BLAST of Chy5G097310 vs.


Match Name	E-value	Identity	Description

BLAST of Chy5G097310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LN19	2.6e-38	92.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G99990 PE=4 SV=1	[more]
A0A5D3DFD2	5.0e-37	87.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B435	5.5e-36	87.64	uncharacterized protein LOC103485796 OS=Cucumis melo OX=3656 GN=LOC103485796 PE=...	[more]
A0A6J1K9Y4	2.4e-31	79.55	uncharacterized protein LOC111492997 OS=Cucurbita maxima OX=3661 GN=LOC111492997...	[more]
A0A6J1GC72	2.4e-31	79.55	uncharacterized protein LOC111452833 OS=Cucurbita moschata OX=3662 GN=LOC1114528...	[more]

BLAST of Chy5G097310 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138912.1	3.37e-50	92.13	uncharacterized protein LOC101222871 [Cucumis sativus] >KGN61366.1 hypothetical ...	[more]
TYK22168.1	5.11e-49	87.91	uncharacterized protein E5676_scaffold333G00250 [Cucumis melo var. makuwa]	[more]
XP_008441719.1	1.78e-47	87.64	PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo]	[more]
XP_038891231.1	4.77e-43	82.95	uncharacterized protein LOC120080586 [Benincasa hispida]	[more]
KAG7036819.1	1.61e-41	79.55	hypothetical protein SDJN02_00439, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Chy5G097310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16380.1	1.9e-20	56.98	Protein of unknown function, DUF538	[more]
AT3G07470.1	3.5e-19	69.35	Protein of unknown function, DUF538	[more]
AT3G07460.1	5.1e-18	68.33	Protein of unknown function, DUF538	[more]
AT3G07460.2	5.1e-18	68.33	Protein of unknown function, DUF538	[more]
AT1G61667.1	2.9e-13	56.45	Protein of unknown function, DUF538	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 6..63 e-value: 5.0E-13 score: 49.5
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	T31J12.3 PROTEIN-RELATED	coord: 5..79
IPR036758	At5g01610-like superfamily	GENE3D	2.30.240.10		coord: 2..74 e-value: 4.1E-12 score: 48.0
IPR036758	At5g01610-like superfamily	SUPERFAMILY	141562	At5g01610-like	coord: 6..70
None	No IPR available	PANTHER	PTHR31676:SF115	PROTEIN, PUTATIVE-RELATED	coord: 5..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G097310.1	Chy5G097310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane