Chy5G097230 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G097230
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	HTH myb-type domain-containing protein
Location	chrH05: 8623909 .. 8625624 (+)
RNA-Seq Expression	Chy5G097230
Synteny	Chy5G097230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTTGGTTTTGTCTACTGATGCAAAACCAAGGCTAAAATGGACTCATGAGCTTCATCAAAGATTTGTTGAAGCTGTCAATCATCTTGGTGGAGCAGATAGTTCAGTTTTCCTTTTTCTTTTTCTTTTTTTCTTTTATTTAATTAACATCATTGTTATTTTTCTTTCTCTATTTTTAATTAATTATTATTGTTATTTTTTTTTTTTTGCAGAAGCTACGCCTAAGAGTTTGATGAGAGTTATGGGAATCACTGGCCTTAGTCTTTACCATCTCAAAAGCCATTTACAGGTTTTTCCATTCTCTTTGATTGCAAAATCAATTTCTATTCAATATCATTTCATATAAAATCCTCATTTTTTTTATAAAAAAAAATTATTGTTGTTGTTGTTTATTTTGAATCAGAAATACAGATTGGGGAAAAGCCAGCAAGCCGAAACCAATGCTCAACTCAAACTAGAAGGTTAGGATTCCCAATAAAATTAATCCATTACAATACTTTAGTTTTCCCTTCTGATTATTAATCTCTCTCTTATTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTCATTGATATTGACTTCAAAGAGATGCAGAAAAAAAGTGGGCATATTGATGGTGAGGAAAACAAGGATAGAACTCAAAACCAAAACAAAACAGAGTACATTTCCATTTCAAATTCATTAGACTTTCCTGTCCGTTTCACCCAAAAGAAAAATGGGTTTGAAAATAACCTTTTTATTACTCACTATTTTGTTTTAATAATTGAAGGAACACGAAGATATCAGAAGCTCTTGAAATGCAATTACAAGTACAGAAGAGACTACAAGAACAAATAGAGGTACAAAAACATTTGCAGCTGAAAATCGAAGCACAAGGGAAGTATTTAAAGATAGTATTAAGAAAAGCACAAGAGACAATTGCAGGGTACGGATGTTGTTCTGAAGCACTTGAAGAAGCCAAAGCAGAGCTTTCGCAATTGGCTTCAATGGTGAGCTCTGGCTGTCAGAGCTCTTGTTTATCAGAATTGACTGACTCAACAGAACTTAATTTTAAAGGGATTGAAAGAGTTGGAAGAAGAATGTGTTCCATTGAAAGCTCTTTAACATCTTCAGATACCTCAGAGGAGGCCCCAATCACGAAGAAGAGAAAAGGAAAAGAAAAAGAAGAGAGTAGCTCCGTTTGTGAGGAGGACGAGGAATTAAGAATGGTGGACTTGAATGATACAGCAATGGGATTTGAATCAAAGTTGATTCAGTTTCTTTAAAAAGGGGGATTTTTGAATGAATGGTGAATTTATTTTGAGATGATGAATATGTGAAGTTTGGTGCTGAAAAGTTGGCATATGCTTGTAAAATGTGTAAATGGGGGTAATTGTACTACAGTATATAATGCATGTTTTCATTAAGTAAAATTTCAAGCAACCCTAATGTTAGACTAAATTATGTGTTAATTAGCTACCTAAACCATTCAAAGTTTCTAGAATATGTACTCGGCTGTTAAAATCTTTCCTAACAATTGGGCCAAAAATTTGTTGCCCATATAATGTGCTATAGTTAAAGGTCATAAAAGGTATACCAAAAGATATAATAATGTCACACAAACCACAAAGGCAAAAGTACATGTTAAAATAGAACGCAACATAATTATACTTATGATCTAAGGAATTCTTATAAATTTTTAGAAAAAAATAGATCTAATGAAAATATTTAA

mRNA sequence

ATGAACTTGGTTTTGTCTACTGATGCAAAACCAAGGCTAAAATGGACTCATGAGCTTCATCAAAGATTTGTTGAAGCTGTCAATCATCTTGGTGGAGCAGATAGTTCAGTTTTCCTTTTTCTTTTTCTTTTTTTCTTTTATTTAATTAACATCATTGTTATTTTTCTTTCTCTATTTTTAATTAATTATTATTGTTATTTTTTTTTTTTTGCAGAAGCTACGCCTAAGAGTTTGATGAGAGTTATGGGAATCACTGGCCTTAGTCTTTACCATCTCAAAAGCCATTTACAGAAATACAGATTGGGGAAAAGCCAGCAAGCCGAAACCAATGCTCAACTCAAACTAGAAGGGTACGGATGTTGTTCTGAAGCACTTGAAGAAGCCAAAGCAGAGCTTTCGCAATTGGCTTCAATGGTGAGCTCTGGCTGTCAGAGCTCTTGTTTATCAGAATTGACTGACTCAACAGAACTTAATTTTAAAGGGATTGAAAGAGTTGGAAGAAGAATATCTAATGAAAATATTTAA

Coding sequence (CDS)

ATGAACTTGGTTTTGTCTACTGATGCAAAACCAAGGCTAAAATGGACTCATGAGCTTCATCAAAGATTTGTTGAAGCTGTCAATCATCTTGGTGGAGCAGATAGTTCAGTTTTCCTTTTTCTTTTTCTTTTTTTCTTTTATTTAATTAACATCATTGTTATTTTTCTTTCTCTATTTTTAATTAATTATTATTGTTATTTTTTTTTTTTTGCAGAAGCTACGCCTAAGAGTTTGATGAGAGTTATGGGAATCACTGGCCTTAGTCTTTACCATCTCAAAAGCCATTTACAGAAATACAGATTGGGGAAAAGCCAGCAAGCCGAAACCAATGCTCAACTCAAACTAGAAGGGTACGGATGTTGTTCTGAAGCACTTGAAGAAGCCAAAGCAGAGCTTTCGCAATTGGCTTCAATGGTGAGCTCTGGCTGTCAGAGCTCTTGTTTATCAGAATTGACTGACTCAACAGAACTTAATTTTAAAGGGATTGAAAGAGTTGGAAGAAGAATATCTAATGAAAATATTTAA

Protein sequence

MNLVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFLINYYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLEGYGCCSEALEEAKAELSQLASMVSSGCQSSCLSELTDSTELNFKGIERVGRRISNENI*

Homology

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BLAST of Chy5G097230 vs. ExPASy Swiss-Prot
Match: Q9SQQ9 (Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.3e-20
Identity = 52/108 (48.15%), Postives = 63/108 (58.33%), Query Frame = 0


Query: 3   LVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFLIN 62
           L+LSTDAKPRLKWT +LH+RF+EAVN LGGAD                            
Sbjct: 38  LILSTDAKPRLKWTPDLHERFIEAVNQLGGAD---------------------------- 97

Query: 63  YYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETN 111
                    +ATPK++M+VMGI GL+LYHLKSHLQKYRL K+   + N
Sbjct: 98  ---------KATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQAN 108

[Close]

BLAST of Chy5G097230 vs. ExPASy Swiss-Prot
Match: Q9FK47 (Myb-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=MYR1 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.7e-20
Identity = 63/168 (37.50%), Postives = 87/168 (51.79%), Query Frame = 0


Query: 3   LVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFLIN 62
           L+LSTDAKPRLKWT +LH+RFVEAVN LGG D                            
Sbjct: 38  LILSTDAKPRLKWTPDLHERFVEAVNQLGGGD---------------------------- 97

Query: 63  YYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLEGYGCCS 122
                    +ATPK++M+VMGI GL+LYHLKSHLQKYRL K+   + N+ L         
Sbjct: 98  ---------KATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANSSLNKTS---VM 157

Query: 123 EALEEAKAELSQLAS-MVSSGCQSSCLSELTDSTELNFKGIERVGRRI 170
             +EE   E+ +  S  +S G Q S    ++D+ ++  +   R+  ++
Sbjct: 158 TMVEENPPEVDESHSESLSIGPQPSMNLPISDALQMQIEVQRRLHEQL 165

[Close]

BLAST of Chy5G097230 vs. ExPASy Swiss-Prot
Match: F4I274 (Myb family transcription factor PHL8 OS=Arabidopsis thaliana OX=3702 GN=PHL8 PE=2 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19
Identity = 53/110 (48.18%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 1   MNLVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFL 60
           M+LVLSTDAKPRLKWT +LH +F+EAVN LGG +                          
Sbjct: 25  MSLVLSTDAKPRLKWTCDLHHKFIEAVNQLGGPN-------------------------- 84

Query: 61  INYYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETN 111
                      +ATPK LM+VM I GL+LYHLKSHLQKYRLGKS + + N
Sbjct: 85  -----------KATPKGLMKVMEIPGLTLYHLKSHLQKYRLGKSMKFDDN 97

[Close]

BLAST of Chy5G097230 vs. ExPASy Swiss-Prot
Match: Q8VYI2 (Myb family transcription factor PHL12 OS=Arabidopsis thaliana OX=3702 GN=PHL12 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.4e-18
Identity = 49/106 (46.23%), Postives = 60/106 (56.60%), Query Frame = 0


Query: 3   LVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFLIN 62
           LVL+TD KPRL+WT ELH+RFV+AV HLGG +                            
Sbjct: 16  LVLTTDPKPRLRWTTELHERFVDAVTHLGGPE---------------------------- 75

Query: 63  YYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAE 109
                    +ATPK++MRVMG+ GL+LYHLKSHLQK+RLGK    E
Sbjct: 76  ---------KATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKE 84

[Close]

BLAST of Chy5G097230 vs. ExPASy Swiss-Prot
Match: E5L8F7 (Myb family transcription factor IPN2 OS=Lotus japonicus OX=34305 GN=IPN2 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.0e-18
Identity = 54/133 (40.60%), Postives = 68/133 (51.13%), Query Frame = 0


Query: 3   LVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFLIN 62
           LVL+TD KPRL+WT ELH+RFV+AV  LGG D                            
Sbjct: 28  LVLTTDPKPRLRWTVELHERFVDAVTQLGGPD---------------------------- 87

Query: 63  YYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLEGYGCCS 122
                    +ATPK++MRVMG+ GL+LYHLKSHLQK+RLGK    E N     +G    +
Sbjct: 88  ---------KATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDGMRASA 123

Query: 123 EALEEAKAELSQL 136
             L+   A  S +
Sbjct: 148 LELQRNTASSSAM 123

[Close]

BLAST of Chy5G097230 vs. ExPASy TrEMBL
Match: A0A0A0LJX4 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G100560 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.5e-50
Identity = 129/245 (52.65%), Postives = 132/245 (53.88%), Query Frame = 0


Query: 1   MNLVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFL 60
           MNLVLSTDAKPRLKWTH+LHQRFVEAVNHLGGAD                          
Sbjct: 9   MNLVLSTDAKPRLKWTHDLHQRFVEAVNHLGGAD-------------------------- 68

Query: 61  INYYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLE---- 120
                      +ATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLE    
Sbjct: 69  -----------KATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLEEMQK 128

Query: 121 ------------------------------------------------------------ 170
                                                                       
Sbjct: 129 KGGHIDGEENKDRTQNQNKTENMKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYL 188

[Close]

BLAST of Chy5G097230 vs. ExPASy TrEMBL
Match: A0A1S3B431 (myb family transcription factor APL OS=Cucumis melo OX=3656 GN=LOC103485789 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.4e-47
Identity = 123/242 (50.83%), Postives = 128/242 (52.89%), Query Frame = 0


Query: 1   MNLVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFL 60
           MNLVLSTDAKPRLKWTHELHQRFVEAVN+LGGAD                          
Sbjct: 13  MNLVLSTDAKPRLKWTHELHQRFVEAVNYLGGAD-------------------------- 72

Query: 61  INYYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLE---- 120
                      +ATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQ+KL+    
Sbjct: 73  -----------KATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQVKLQEMQK 132

Query: 121 ------------------------------------------------------------ 167
                                                                       
Sbjct: 133 KSGHFDGEENKDRTQNQNKTENMKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYL 192

[Close]

BLAST of Chy5G097230 vs. ExPASy TrEMBL
Match: A0A6J1GAW5 (myb-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111452478 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.3e-30
Identity = 97/220 (44.09%), Postives = 112/220 (50.91%), Query Frame = 0


Query: 1   MNLVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFL 60
           MNLVLSTD KPRLKWT ELHQRFV+AV HLGGA                           
Sbjct: 18  MNLVLSTDPKPRLKWTPELHQRFVDAVAHLGGAH-------------------------- 77

Query: 61  INYYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNA--------- 120
                      +ATPKSLMR MGITGL+LYHLKSHLQKYRLGK+Q+ E ++         
Sbjct: 78  -----------KATPKSLMRAMGITGLTLYHLKSHLQKYRLGKTQKPENHSMNENMKRLH 137

Query: 121 ---------QLKLE------------------GYGCCSEALEEAKAELSQLASMVSSGCQ 173
                    QL++E                  GYGCCSEALEEAKAELS+LASMVS G Q
Sbjct: 138 EQIEVQRHLQLRIEAQGKYLQRVLRRAQEMIAGYGCCSEALEEAKAELSELASMVSYGYQ 197

[Close]

BLAST of Chy5G097230 vs. ExPASy TrEMBL
Match: A0A6J1KEW5 (myb-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492633 PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 4.8e-30
Identity = 96/220 (43.64%), Postives = 112/220 (50.91%), Query Frame = 0


Query: 1   MNLVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFL 60
           +NLVLSTD KPRLKWT ELHQRFV+AV HLGGA                           
Sbjct: 18  INLVLSTDPKPRLKWTPELHQRFVDAVVHLGGAH-------------------------- 77

Query: 61  INYYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNA--------- 120
                      +ATPKSLMR MGITGL+LYHLKSHLQKYRLGK+Q+ E ++         
Sbjct: 78  -----------KATPKSLMRAMGITGLTLYHLKSHLQKYRLGKTQKPENHSMNENMKRLH 137

Query: 121 ---------QLKLE------------------GYGCCSEALEEAKAELSQLASMVSSGCQ 173
                    QL++E                  GYGCCSEALEEAKAELS+LASMVS G Q
Sbjct: 138 EQIEVQRHLQLRIEAQGKYLQRVLRRAQEMIAGYGCCSEALEEAKAELSELASMVSYGYQ 197

[Close]

BLAST of Chy5G097230 vs. ExPASy TrEMBL
Match: A0A4Y1QQV9 ((R)-mandelonitrile lyase (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_002483 PE=3 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 4.1e-29
Identity = 97/225 (43.11%), Postives = 109/225 (48.44%), Query Frame = 0


Query: 1   MNLVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFL 60
           MNLVLSTDAKPRLKWT ELHQRFVEAVN LGGAD                          
Sbjct: 7   MNLVLSTDAKPRLKWTPELHQRFVEAVNQLGGAD-------------------------- 66

Query: 61  INYYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQ-------KYRLGKSQQAET---- 120
                      +ATPKSLMRVMGI GL+LYHLKSHLQ       KYRLGKSQQ+E     
Sbjct: 67  -----------KATPKSLMRVMGIHGLTLYHLKSHLQAYFSLFLKYRLGKSQQSENCTDI 126

Query: 121 -----------------------------------------NAQLKLEGYGCCSEALEEA 174
                                                     AQ  L GYG  S  +E A
Sbjct: 127 KQEAESLQLQMEVQRKLHEQIERHLQLRIEAQGKYLQTVLKKAQETLSGYGSSSVGVELA 186

[Close]

BLAST of Chy5G097230 vs. NCBI nr
Match: XP_004138915.1 (myb family transcription factor PHL8 [Cucumis sativus] >KGN61374.1 hypothetical protein Csa_006332 [Cucumis sativus])

HSP 1 Score: 208 bits (529), Expect = 5.04e-64
Identity = 129/245 (52.65%), Postives = 132/245 (53.88%), Query Frame = 0


Query: 1   MNLVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFL 60
           MNLVLSTDAKPRLKWTH+LHQRFVEAVNHLGGAD                          
Sbjct: 9   MNLVLSTDAKPRLKWTHDLHQRFVEAVNHLGGAD-------------------------- 68

Query: 61  INYYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLE---- 120
                      +ATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLE    
Sbjct: 69  -----------KATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLEEMQK 128

Query: 121 ------------------------------------------------------------ 169
                                                                       
Sbjct: 129 KGGHIDGEENKDRTQNQNKTENMKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYL 188

[Close]

BLAST of Chy5G097230 vs. NCBI nr
Match: XP_008441712.1 (PREDICTED: myb family transcription factor APL [Cucumis melo])

HSP 1 Score: 196 bits (499), Expect = 2.62e-59
Identity = 123/242 (50.83%), Postives = 128/242 (52.89%), Query Frame = 0


Query: 1   MNLVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFL 60
           MNLVLSTDAKPRLKWTHELHQRFVEAVN+LGGAD                          
Sbjct: 13  MNLVLSTDAKPRLKWTHELHQRFVEAVNYLGGAD-------------------------- 72

Query: 61  INYYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLE---- 120
                      +ATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQ+KL+    
Sbjct: 73  -----------KATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQVKLQEMQK 132

Query: 121 ------------------------------------------------------------ 166
                                                                       
Sbjct: 133 KSGHFDGEENKDRTQNQNKTENMKISEALEMQLQVQKRLQEQIEVQKHLQLKIEAQGKYL 192

[Close]

BLAST of Chy5G097230 vs. NCBI nr
Match: XP_038889649.1 (myb family transcription factor PHL8-like isoform X2 [Benincasa hispida])

HSP 1 Score: 193 bits (491), Expect = 4.10e-58
Identity = 122/246 (49.59%), Postives = 128/246 (52.03%), Query Frame = 0


Query: 1   MNLVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFL 60
           MNLVLSTDAKPRLKWT ELH+RFVEAVNHLGGAD                          
Sbjct: 1   MNLVLSTDAKPRLKWTPELHERFVEAVNHLGGAD-------------------------- 60

Query: 61  INYYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLE---- 120
                      +ATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQ+ETNA LKL+    
Sbjct: 61  -----------KATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQSETNAHLKLQEMQR 120

Query: 121 ------------------------------------------------------------ 169
                                                                       
Sbjct: 121 KGGHFDGEEENKDRIQNHNETENMKISEALQMQLEVQKKLQEQIEVQRHLQLRIEAQGKY 180

[Close]

BLAST of Chy5G097230 vs. NCBI nr
Match: XP_038889648.1 (myb family transcription factor PHL8-like isoform X1 [Benincasa hispida])

HSP 1 Score: 193 bits (491), Expect = 4.88e-58
Identity = 122/246 (49.59%), Postives = 128/246 (52.03%), Query Frame = 0


Query: 1   MNLVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFL 60
           MNLVLSTDAKPRLKWT ELH+RFVEAVNHLGGAD                          
Sbjct: 7   MNLVLSTDAKPRLKWTPELHERFVEAVNHLGGAD-------------------------- 66

Query: 61  INYYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLE---- 120
                      +ATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQ+ETNA LKL+    
Sbjct: 67  -----------KATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQSETNAHLKLQEMQR 126

Query: 121 ------------------------------------------------------------ 169
                                                                       
Sbjct: 127 KGGHFDGEEENKDRIQNHNETENMKISEALQMQLEVQKKLQEQIEVQRHLQLRIEAQGKY 186

[Close]

BLAST of Chy5G097230 vs. NCBI nr
Match: KAG7036815.1 (Myb family transcription factor PHL8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162 bits (410), Expect = 2.17e-46
Identity = 107/220 (48.64%), Postives = 129/220 (58.64%), Query Frame = 0


Query: 1   MNLVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFL 60
           MNLVLSTD KPRLKWT ELHQRFV+AV HLGGA S V + + +++  LI          L
Sbjct: 18  MNLVLSTDPKPRLKWTPELHQRFVDAVAHLGGAHSFVLVLVLVWWRVLIR---------L 77

Query: 61  INYYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNA--------- 120
           ++ +C  FF AEATPKSLMR MGITGL+LYHLKSHLQKYRLGK+Q+ E ++         
Sbjct: 78  VSCFCVCFFVAEATPKSLMRAMGITGLTLYHLKSHLQKYRLGKTQKPENHSMNENMKRLH 137

Query: 121 ---------QLKLE------------------GYGCCSEALEEAKAELSQLASMVSSGCQ 172
                    QL++E                  GYGCCSEALEEAKAELS+LASMVS G Q
Sbjct: 138 EQIEVQRHLQLRIEAQGKYLQRVLRRAQDMIAGYGCCSEALEEAKAELSELASMVSYGYQ 197

[Close]

BLAST of Chy5G097230 vs. TAIR 10
Match: AT3G04030.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.4e-21
Identity = 52/108 (48.15%), Postives = 63/108 (58.33%), Query Frame = 0


Query: 3   LVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFLIN 62
           L+LSTDAKPRLKWT +LH+RF+EAVN LGGAD                            
Sbjct: 38  LILSTDAKPRLKWTPDLHERFIEAVNQLGGAD---------------------------- 97

Query: 63  YYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETN 111
                    +ATPK++M+VMGI GL+LYHLKSHLQKYRL K+   + N
Sbjct: 98  ---------KATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQAN 108

[Close]

BLAST of Chy5G097230 vs. TAIR 10
Match: AT3G04030.3 (Homeodomain-like superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.4e-21
Identity = 52/108 (48.15%), Postives = 63/108 (58.33%), Query Frame = 0


Query: 3   LVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFLIN 62
           L+LSTDAKPRLKWT +LH+RF+EAVN LGGAD                            
Sbjct: 38  LILSTDAKPRLKWTPDLHERFIEAVNQLGGAD---------------------------- 97

Query: 63  YYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETN 111
                    +ATPK++M+VMGI GL+LYHLKSHLQKYRL K+   + N
Sbjct: 98  ---------KATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQAN 108

[Close]

BLAST of Chy5G097230 vs. TAIR 10
Match: AT5G18240.1 (myb-related protein 1 )

HSP 1 Score: 99.0 bits (245), Expect = 4.0e-21
Identity = 63/168 (37.50%), Postives = 87/168 (51.79%), Query Frame = 0


Query: 3   LVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFLIN 62
           L+LSTDAKPRLKWT +LH+RFVEAVN LGG D                            
Sbjct: 38  LILSTDAKPRLKWTPDLHERFVEAVNQLGGGD---------------------------- 97

Query: 63  YYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLEGYGCCS 122
                    +ATPK++M+VMGI GL+LYHLKSHLQKYRL K+   + N+ L         
Sbjct: 98  ---------KATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANSSLNKTS---VM 157

Query: 123 EALEEAKAELSQLAS-MVSSGCQSSCLSELTDSTELNFKGIERVGRRI 170
             +EE   E+ +  S  +S G Q S    ++D+ ++  +   R+  ++
Sbjct: 158 TMVEENPPEVDESHSESLSIGPQPSMNLPISDALQMQIEVQRRLHEQL 165

[Close]

BLAST of Chy5G097230 vs. TAIR 10
Match: AT5G18240.4 (myb-related protein 1 )

HSP 1 Score: 99.0 bits (245), Expect = 4.0e-21
Identity = 63/168 (37.50%), Postives = 87/168 (51.79%), Query Frame = 0


Query: 3   LVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFLIN 62
           L+LSTDAKPRLKWT +LH+RFVEAVN LGG D                            
Sbjct: 38  LILSTDAKPRLKWTPDLHERFVEAVNQLGGGD---------------------------- 97

Query: 63  YYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLEGYGCCS 122
                    +ATPK++M+VMGI GL+LYHLKSHLQKYRL K+   + N+ L         
Sbjct: 98  ---------KATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANSSLNKTS---VM 157

Query: 123 EALEEAKAELSQLAS-MVSSGCQSSCLSELTDSTELNFKGIERVGRRI 170
             +EE   E+ +  S  +S G Q S    ++D+ ++  +   R+  ++
Sbjct: 158 TMVEENPPEVDESHSESLSIGPQPSMNLPISDALQMQIEVQRRLHEQL 165

[Close]

BLAST of Chy5G097230 vs. TAIR 10
Match: AT5G18240.3 (myb-related protein 1 )

HSP 1 Score: 99.0 bits (245), Expect = 4.0e-21
Identity = 63/168 (37.50%), Postives = 87/168 (51.79%), Query Frame = 0


Query: 3   LVLSTDAKPRLKWTHELHQRFVEAVNHLGGADSSVFLFLFLFFFYLINIIVIFLSLFLIN 62
           L+LSTDAKPRLKWT +LH+RFVEAVN LGG D                            
Sbjct: 38  LILSTDAKPRLKWTPDLHERFVEAVNQLGGGD---------------------------- 97

Query: 63  YYCYFFFFAEATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQQAETNAQLKLEGYGCCS 122
                    +ATPK++M+VMGI GL+LYHLKSHLQKYRL K+   + N+ L         
Sbjct: 98  ---------KATPKTIMKVMGIPGLTLYHLKSHLQKYRLSKNLNGQANSSLNKTS---VM 157

Query: 123 EALEEAKAELSQLAS-MVSSGCQSSCLSELTDSTELNFKGIERVGRRI 170
             +EE   E+ +  S  +S G Q S    ++D+ ++  +   R+  ++
Sbjct: 158 TMVEENPPEVDESHSESLSIGPQPSMNLPISDALQMQIEVQRRLHEQL 165

The following BLAST results are available for this feature:

BLAST of Chy5G097230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SQQ9	3.3e-20	48.15	Myb-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=MYR2 PE=1 SV=1	[more]
Q9FK47	5.7e-20	37.50	Myb-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=MYR1 PE=1 SV=1	[more]
F4I274	2.2e-19	48.18	Myb family transcription factor PHL8 OS=Arabidopsis thaliana OX=3702 GN=PHL8 PE=...	[more]
Q8VYI2	2.4e-18	46.23	Myb family transcription factor PHL12 OS=Arabidopsis thaliana OX=3702 GN=PHL12 P...	[more]
E5L8F7	7.0e-18	40.60	Myb family transcription factor IPN2 OS=Lotus japonicus OX=34305 GN=IPN2 PE=1 SV...	[more]

BLAST of Chy5G097230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJX4	2.5e-50	52.65	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G10056...	[more]
A0A1S3B431	7.4e-47	50.83	myb family transcription factor APL OS=Cucumis melo OX=3656 GN=LOC103485789 PE=3...	[more]
A0A6J1GAW5	1.3e-30	44.09	myb-related protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111452478 PE=3 SV...	[more]
A0A6J1KEW5	4.8e-30	43.64	myb-related protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111492633 PE=3 SV=1	[more]
A0A4Y1QQV9	4.1e-29	43.11	(R)-mandelonitrile lyase (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_002483 PE=...	[more]

BLAST of Chy5G097230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138915.1	5.04e-64	52.65	myb family transcription factor PHL8 [Cucumis sativus] >KGN61374.1 hypothetical ...	[more]
XP_008441712.1	2.62e-59	50.83	PREDICTED: myb family transcription factor APL [Cucumis melo]	[more]
XP_038889649.1	4.10e-58	49.59	myb family transcription factor PHL8-like isoform X2 [Benincasa hispida]	[more]
XP_038889648.1	4.88e-58	49.59	myb family transcription factor PHL8-like isoform X1 [Benincasa hispida]	[more]
KAG7036815.1	2.17e-46	48.64	Myb family transcription factor PHL8 [Cucurbita argyrosperma subsp. argyrosperma...	[more]

BLAST of Chy5G097230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04030.1	2.4e-21	48.15	Homeodomain-like superfamily protein	[more]
AT3G04030.3	2.4e-21	48.15	Homeodomain-like superfamily protein	[more]
AT5G18240.1	4.0e-21	37.50	myb-related protein 1	[more]
AT5G18240.4	4.0e-21	37.50	myb-related protein 1	[more]
AT5G18240.3	4.0e-21	37.50	myb-related protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 9..104 e-value: 1.1E-24 score: 88.3
None	No IPR available	PANTHER	PTHR31499:SF11	MYB FAMILY TRANSCRIPTION FACTOR PHL8	coord: 72..112 coord: 1..35
None	No IPR available	PANTHER	PTHR31499:SF11	MYB FAMILY TRANSCRIPTION FACTOR PHL8	coord: 111..165
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 72..102 e-value: 1.8E-8 score: 32.5 coord: 10..35 e-value: 2.6E-8 score: 32.0
IPR044848	PHR1-like	PANTHER	PTHR31499	MYB FAMILY TRANSCRIPTION FACTOR PHL11	coord: 111..165
IPR044848	PHR1-like	PANTHER	PTHR31499	MYB FAMILY TRANSCRIPTION FACTOR PHL11	coord: 72..112 coord: 1..35
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 68..102

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G097230.1	Chy5G097230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity