Chy5G096960 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTCTTGGATTCCAAGAAGCTGAGAAAAGGGGAGTTCCCAATCCCAACCATTTTCTTAATTTGCACCAACCCTCTCAAAATCACTACTATTCCATGGATGGATCCTCCAATAATTCCAATTTCGGTTCCGATTCCACAAATAGGATTACGTATTACTCCGCCGCAGCACAAGACCGGCGTAAGGTTGAGTATTTGCGATCTCTATCCCAGGGGACACCACGTCGATTGGTGCCGGCCGCGAGCTATTTAGGGGTTCTGCTCTGTTTGGCGGCATCGTTGTTGATTCTTCCGTTGGTTCTACCGCCGCTGCCGCCGCCGCCTTTGATGCTGCTGCTGCTTCTTCCGATTGGGATTTTGGGAATGCTAATGGTGTTAGCGTTTATGCCTTCTAATGACACCAAGGATATAACCTCTTCCTCTCATACATATATGTAA ATGACTCTTGGATTCCAAGAAGCTGAGAAAAGGGGAGTTCCCAATCCCAACCATTTTCTTAATTTGCACCAACCCTCTCAAAATCACTACTATTCCATGGATGGATCCTCCAATAATTCCAATTTCGGTTCCGATTCCACAAATAGGATTACGTATTACTCCGCCGCAGCACAAGACCGGCGTAAGGTTGAGTATTTGCGATCTCTATCCCAGGGGACACCACGTCGATTGGTGCCGGCCGCGAGCTATTTAGGGGTTCTGCTCTGTTTGGCGGCATCGTTGTTGATTCTTCCGTTGGTTCTACCGCCGCTGCCGCCGCCGCCTTTGATGCTGCTGCTGCTTCTTCCGATTGGGATTTTGGGAATGCTAATGGTGTTAGCGTTTATGCCTTCTAATGACACCAAGGATATAACCTCTTCCTCTCATACATATATGTAA ATGACTCTTGGATTCCAAGAAGCTGAGAAAAGGGGAGTTCCCAATCCCAACCATTTTCTTAATTTGCACCAACCCTCTCAAAATCACTACTATTCCATGGATGGATCCTCCAATAATTCCAATTTCGGTTCCGATTCCACAAATAGGATTACGTATTACTCCGCCGCAGCACAAGACCGGCGTAAGGTTGAGTATTTGCGATCTCTATCCCAGGGGACACCACGTCGATTGGTGCCGGCCGCGAGCTATTTAGGGGTTCTGCTCTGTTTGGCGGCATCGTTGTTGATTCTTCCGTTGGTTCTACCGCCGCTGCCGCCGCCGCCTTTGATGCTGCTGCTGCTTCTTCCGATTGGGATTTTGGGAATGCTAATGGTGTTAGCGTTTATGCCTTCTAATGACACCAAGGATATAACCTCTTCCTCTCATACATATATGTAA MTLGFQEAEKRGVPNPNHFLNLHQPSQNHYYSMDGSSNNSNFGSDSTNRITYYSAAAQDRRKVEYLRSLSQGTPRRLVPAASYLGVLLCLAASLLILPLVLPPLPPPPLMLLLLLPIGILGMLMVLAFMPSNDTKDITSSSHTYM* Homology
BLAST of Chy5G096960 vs. ExPASy Swiss-Prot
Match: Q8RXL7 (ARGOS-like protein OS=Arabidopsis thaliana OX=3702 GN=ARL PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 8.7e-14 Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of Chy5G096960 vs. ExPASy Swiss-Prot
Match: Q6NMD6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Arabidopsis thaliana OX=3702 GN=ARGOS PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 3.8e-09 Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 0
BLAST of Chy5G096960 vs. ExPASy Swiss-Prot
Match: C7SFP6 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Brassica rapa subsp. pekinensis OX=51351 GN=ARGOS PE=2 SV=2) HSP 1 Score: 59.3 bits (142), Expect = 4.2e-08 Identity = 57/136 (41.91%), Postives = 78/136 (57.35%), Query Frame = 0
BLAST of Chy5G096960 vs. ExPASy Swiss-Prot
Match: Q7X6L2 (Protein AUXIN-REGULATED GENE INVOLVED IN ORGAN SIZE OS=Oryza sativa subsp. japonica OX=39947 GN=ARGOS PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 3.3e-05 Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of Chy5G096960 vs. ExPASy TrEMBL
Match: A0A0A0LHQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123610 PE=3 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 2.0e-69 Identity = 143/145 (98.62%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of Chy5G096960 vs. ExPASy TrEMBL
Match: A0A6J1ICV1 (ARGOS-like protein OS=Cucurbita maxima OX=3661 GN=LOC111472634 PE=3 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 3.8e-36 Identity = 94/148 (63.51%), Postives = 112/148 (75.68%), Query Frame = 0
BLAST of Chy5G096960 vs. ExPASy TrEMBL
Match: A0A6J1EU41 (ARGOS-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436595 PE=3 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 5.6e-32 Identity = 88/145 (60.69%), Postives = 110/145 (75.86%), Query Frame = 0
BLAST of Chy5G096960 vs. ExPASy TrEMBL
Match: A0A061ERG1 (Auxin-regulated gene involved in organ size OS=Theobroma cacao OX=3641 GN=TCM_021527 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 8.2e-15 Identity = 59/91 (64.84%), Postives = 71/91 (78.02%), Query Frame = 0
BLAST of Chy5G096960 vs. ExPASy TrEMBL
Match: A0A2C9VY78 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G208400 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.8e-14 Identity = 57/91 (62.64%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of Chy5G096960 vs. NCBI nr
Match: KGN61450.1 (hypothetical protein Csa_006551 [Cucumis sativus]) HSP 1 Score: 270 bits (690), Expect = 7.27e-91 Identity = 143/145 (98.62%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of Chy5G096960 vs. NCBI nr
Match: XP_038875191.1 (ARGOS-like protein [Benincasa hispida]) HSP 1 Score: 218 bits (556), Expect = 2.00e-70 Identity = 125/147 (85.03%), Postives = 135/147 (91.84%), Query Frame = 0
BLAST of Chy5G096960 vs. NCBI nr
Match: XP_022974015.1 (ARGOS-like protein [Cucurbita maxima] >XP_022974016.1 ARGOS-like protein [Cucurbita maxima]) HSP 1 Score: 159 bits (403), Expect = 3.74e-47 Identity = 94/148 (63.51%), Postives = 112/148 (75.68%), Query Frame = 0
BLAST of Chy5G096960 vs. NCBI nr
Match: XP_023514167.1 (ARGOS-like protein [Cucurbita pepo subsp. pepo]) HSP 1 Score: 152 bits (383), Expect = 5.39e-44 Identity = 94/157 (59.87%), Postives = 111/157 (70.70%), Query Frame = 0
BLAST of Chy5G096960 vs. NCBI nr
Match: KAG6601768.1 (hypothetical protein SDJN03_07001, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 150 bits (380), Expect = 1.32e-43 Identity = 90/150 (60.00%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of Chy5G096960 vs. TAIR 10
Match: AT2G44080.1 (ARGOS-like ) HSP 1 Score: 78.2 bits (191), Expect = 6.2e-15 Identity = 63/126 (50.00%), Postives = 84/126 (66.67%), Query Frame = 0
BLAST of Chy5G096960 vs. TAIR 10
Match: AT3G59900.1 (auxin-regulated gene involved in organ size ) HSP 1 Score: 62.8 bits (151), Expect = 2.7e-10 Identity = 52/116 (44.83%), Postives = 69/116 (59.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|