Chy5G096910 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCTGCAACATTCACTGGCTTTACCGTCTCTGCTTTTGCCTTCCTCTAGTTGCAAATTTGAAGGGGGTACTTTATTTGTATCAACCAGTTCCCAAACCACCAATCTTCTCTCTTCTTGGACCTTGGAGTCTTCCTATCCTTCATCCATCTCTTTCATGAAGTTTCCTTTCCGGGTAATGTAATTCTCTAATCCGTATACTCTTATAACTGGGAATCATTCCCAATTCACTCCATCGTAGTTTGACTTTTGTAGAGTTGTTTTTAGACATGGTGCAACAACCTACTCGTAATTAAATCACTTTGAAAGAATGTAACTAAACAATATTTCAGTGTTCGTTTCTTGTTACTTGGGGAGACTAACTGTGAAGCGCTTCATGTTATTATCTGTAGGGTGGTTGTTTTAGAAGCAGCTCTCTAAGGGCCTATAGAACCGCAGGGTCAATCAGGCCAGGTGATGGGAAGAAGAAGAAAGAACAAGCAGGTATGGACTCAGATGAGGAAGTTGATTCTTCTTCAGCAAAGGAGCCAGATGTTGAGCTTATGGATGTCGAAGAGAGACGGGAATGGAGGGAGAAGATTAGGAAAGTGATTGATATGAACCCCAATGTTGAGGAGGAGATAGACAACATGGAAAGGAGAATAAAGATGCAAAAACTTCTCGCTGACTATCCTCTTGTTGTGGAAGAGGAGGATCCTGATTGGCCTGAGGATGCTGATGGTTGGGGTTTCAACTTGGGTCAGTTTTTTGATAAGATCACCATCAAGAATAAGAAAAAAGACGATAAATATGATGATGATAAAGATGACACTGATAATGAAGTAGTTTGGCAAGATGACAACTACATTCGTCCAATTAAGGACATAACAATTTCTGAATGGGAGGAGGCTGTGTTCAAAGATATTAGTCCTCTAATCCTTTTTGTACACAATCGCTACAAAAGGTATGCTCTTTGAAGGCATCAGTATCTTGTGTGGGGAAAAATTGTTTTTATGTCTTTGATTGACTTTTATCTCTTTTTATATATATTTTTTATTAATTCCAAACCTATGATCCAATGCAAGGATCTTGTTCGGTATCCAACCTGACTTCCAAAAACCCAGAAATGTACTAGTAACAGTCCTGTGATTCTTATATCAAGATAAACAATTGTCTGAGTCCACCATATTAACAAGAAATCCTCCATAACATAAACAAGATTTTAATAAGCAAGGAATTAAAAAAGAAACAAAACACCATCACATTCGAGAGACCTGGAAATCCTCTTTAAGCCTCAACTTCACCCAAATTCTTCCCCTAGATAATGAGGCTGAAACCCCCATCGGCCCTATGAAAACCCTCAATTGGACCCCCACCTCAAAGTACAATAGTGAAATACAAAGAGCAACAAAATACAAGAAACAGCAACAAACCCACACCCAAAACACCCTTAACAAATCCTAATACGACCAACTGACAACAAATATCAAAACAAAATTAATAACAATACAAGCAATCATGCTTAATCGACCAAGAATACAAGCCAAGAAAAGAAAAATCCGGGCAAAATAAGGCTTTTCTACCAAGAGATAACTTGCTGTGAGGCTAGTAAAGACAGAATGACCCCTTCAAGCCAATTGCTTAATTATGAGAGATACGCTGATTTCTTTCAAACCAAAACCAATCTGAAGGATCTTTAACAACAGTAGACCAAATCAACCGTGGCTTAGCTTCCAAGGACTTAACAAAGTCTTTGAGAACATCATCACCGGGAGCTAACTCTCCTTCCAACATTAATCTTAGGTCTCAATATCAAATTATTCGAAAAAGCTTGTCAAACAACCGGGGCGGGGGGATGGGTGTGACAAAAGTTCGAGTGTTCTTCAAATAAAACAGAGCATTGAGGAAAGCATCGAGATTGTCATTTGCACTACTATTTCTTGGTTATCTTCGACCCAAAATAATCTATGACTTCAATCAAACATAATCAAAGAGTACGCCAAGGAGAGCGATTAGCTCAAAATTGAAACACTCTTCAACCAAAACATCATTAATTGATGGAAGAGTAGTTTTCACAAGTATCCAATCTAACCTCATCAAACTCAACATTAAGGCCGACAAGGAATTTGTAAATATGACCAACTTCTACAGTTTTTTTGTAATGCTTTTGATCTTCTGTAGACTTCCACTCATATGTATCAAAGAGATCAAGGTCTTGCCAAATCCTTTTTAGGGAGTGAAAGTATTGTGTCATGGAGTTGCCTCCTTGTAGTATAGCACCTAGTTTAAGATTCACCCTTAACACTTGTGACTGGTTGCCCAAATGAGAATACATTTGAGTAACACTATTCCGTAATTCCTTGTTTAAAAAACATGATCACCTAAATGTTGAAGTGTACACTAGTGTTGATTGGGCAGGTGGCACGATTATTGCTCCTTTGTTGAAGGAAATCTAGTTACTTAGTGAGTAAAAAATAGAGCGTGATTGCAAGAAATAGTGCAGAAGCAGAATTTAGGGTTTTAGCTCATGGTATTTGTGAGAGCATATGGATAAGAATATTGGAAGAATTGAGATTCTCTCAGATAATACTTATCCCCATTTATTGTGATAACAAGGTAACAATTTCCATTGTCCACAATCCAGTCCTTCATGATGAGACAAAACATATTGAAGTTGATAAACACTTCATAAAGGAAAAAATTGTTAAGGAGTACCATGCATCCCTTATCTTCTGCCAACATAACAAATCACAGATGTGCTAGTTAAAGGTCTCCCAAAGTGGCAATTCAATAACTTAATTGACAAGCTGGCTATGGATGACATCTTCAAACCAACTTGAGGGGGAGTGTTGATTATTTCCTTTATTCTTAATATTTTTATTGTATTTAAGATATATTTGCATATTTGTTTTTTCCTACTTCGTATTGGGTATTTCTTCTATTTAAGAAAACCCTTTTCCTTTTAAATGATATAATAGAAAAACACCTTTTTACGCAATTTCTATAACTAGGATTCTTACATTTTCATACCTTTCCTGTTATGTGTTCAGTTGTTATTGTTATACTGTCACGTTATTCTCCCATGGCCTCTTCACTAGATTATAATGGAACTTTTGAAGTAATAACTACACTTCAGCCACCATTTCGTTAGATTAGATTCTAGAAGGTCTTTTCATAACGCTCCCTCTGGAAGAGGAGATTCCTTTTCCCCTTGTCATTAGGCTGTTTTGTTGAGGCTTTGGGCCACTTTGAATGATGTTCCTTGTTTCTCAATTCTCATTAAAAAAGGTAATAATGGGTTAGTAGAAGTAGCTGGCAGGACTGGTCCTCATTGTGGAAATAAAGATATCCCCTCTTCTCCATAATTTGAAGATGGTGATTCTGTTGGTGCAATAGTTTTTTCTTTGTTTCCGCATACTTTGGTGCATTTCCACCTATAGTTTCTTGAGTCCTCCCTCCATACACTATGCAGTTCCACTAGTTCTTCTTCCACTCCTGAGATCTTCTACTCCCCTGAAATGATACTTTCTTCCATACTCCAAATGCTTAATTGCGAGGATCTTACTAGTCTAATCGACTAATACCGATTGGTCATTATTACTTAACGACACAGATTATTATGTCAGAAAAGACAAAGTACAAATGAGGAGAGTTTGAGAGCTCCTCCTCTTCAAATGCCACCCTATGTTGTTGCACACACTATTGTAATAGACATATTTGATTTCTTGGTTTAACTTGTCGGGAATATGGAGGACCTTTGAATTGTGAACAGTTGACTTTGAATAATCCTTGAACGTTATGGTTGCAGTGATTTAACAATAACATGAATCATAAGATGATCTTGATCTGTATATGAAAGAAATTTGAACATTTTGAAGGTCATGTATTTGTTTTCAATTAGGCCAAAGGAAAATGAAAAAGTTCGGGAGGAGCTGGAGAAAGCTATACACATAATATGGAATTGCAATCTGCCTTCGCCAAGAGTAAGCCTTTCCTATTTATTGACGGTACTTTGCTCGTCTCTCTACATTTAGCAAATGTTGTTATTTTAAACGTCTGTTTTTGACTGCAGTGTGTTGCTGTTGACGCGGTTGTTGAATGCAACTTGGTCTCTGCTCTTCAGGTGTCTGCCTTTCCAGAGATTATCTTCACTAAAGCAGGGAAAATCTTATACCGTGAGAAGGGTAAGTGCAAAAGGAAGTGAAAACATTGCAAGTTTTGTTAATGAAACCTAGAGGTCTGAGTTTTGGGTTGTTTCAGGATTTGTAAGTGCAGATGAGTTGTCCAAAATAATGGCATTCTTCTACTATGGAGCAGCTAAGCCACCATGTTTAAATGACGTTGGGGATTATCAGGAGGCGATCCCATCAGTTTCTTCCTAA ATGGCGCTGCAACATTCACTGGCTTTACCGTCTCTGCTTTTGCCTTCCTCTAGTTGCAAATTTGAAGGGGGTACTTTATTTGTATCAACCAGTTCCCAAACCACCAATCTTCTCTCTTCTTGGACCTTGGAGTCTTCCTATCCTTCATCCATCTCTTTCATGAAGTTTCCTTTCCGGGGTGGTTGTTTTAGAAGCAGCTCTCTAAGGGCCTATAGAACCGCAGGGTCAATCAGGCCAGGTGATGGGAAGAAGAAGAAAGAACAAGCAGGTATGGACTCAGATGAGGAAGTTGATTCTTCTTCAGCAAAGGAGCCAGATGTTGAGCTTATGGATGTCGAAGAGAGACGGGAATGGAGGGAGAAGATTAGGAAAGTGATTGATATGAACCCCAATGTTGAGGAGGAGATAGACAACATGGAAAGGAGAATAAAGATGCAAAAACTTCTCGCTGACTATCCTCTTGTTGTGGAAGAGGAGGATCCTGATTGGCCTGAGGATGCTGATGGTTGGGGTTTCAACTTGGGTCAGTTTTTTGATAAGATCACCATCAAGAATAAGAAAAAAGACGATAAATATGATGATGATAAAGATGACACTGATAATGAAGTAGTTTGGCAAGATGACAACTACATTCGTCCAATTAAGGACATAACAATTTCTGAATGGGAGGAGGCTGTGTTCAAAGATATTAGTCCTCTAATCCTTTTTGTACACAATCGCTACAAAAGGCCAAAGGAAAATGAAAAAGTTCGGGAGGAGCTGGAGAAAGCTATACACATAATATGGAATTGCAATCTGCCTTCGCCAAGATGTGTTGCTGTTGACGCGGTTGTTGAATGCAACTTGGTCTCTGCTCTTCAGGTGTCTGCCTTTCCAGAGATTATCTTCACTAAAGCAGGGAAAATCTTATACCGTGAGAAGGGATTTGTAAGTGCAGATGAGTTGTCCAAAATAATGGCATTCTTCTACTATGGAGCAGCTAAGCCACCATGTTTAAATGACGTTGGGGATTATCAGGAGGCGATCCCATCAGTTTCTTCCTAA ATGGCGCTGCAACATTCACTGGCTTTACCGTCTCTGCTTTTGCCTTCCTCTAGTTGCAAATTTGAAGGGGGTACTTTATTTGTATCAACCAGTTCCCAAACCACCAATCTTCTCTCTTCTTGGACCTTGGAGTCTTCCTATCCTTCATCCATCTCTTTCATGAAGTTTCCTTTCCGGGGTGGTTGTTTTAGAAGCAGCTCTCTAAGGGCCTATAGAACCGCAGGGTCAATCAGGCCAGGTGATGGGAAGAAGAAGAAAGAACAAGCAGGTATGGACTCAGATGAGGAAGTTGATTCTTCTTCAGCAAAGGAGCCAGATGTTGAGCTTATGGATGTCGAAGAGAGACGGGAATGGAGGGAGAAGATTAGGAAAGTGATTGATATGAACCCCAATGTTGAGGAGGAGATAGACAACATGGAAAGGAGAATAAAGATGCAAAAACTTCTCGCTGACTATCCTCTTGTTGTGGAAGAGGAGGATCCTGATTGGCCTGAGGATGCTGATGGTTGGGGTTTCAACTTGGGTCAGTTTTTTGATAAGATCACCATCAAGAATAAGAAAAAAGACGATAAATATGATGATGATAAAGATGACACTGATAATGAAGTAGTTTGGCAAGATGACAACTACATTCGTCCAATTAAGGACATAACAATTTCTGAATGGGAGGAGGCTGTGTTCAAAGATATTAGTCCTCTAATCCTTTTTGTACACAATCGCTACAAAAGGCCAAAGGAAAATGAAAAAGTTCGGGAGGAGCTGGAGAAAGCTATACACATAATATGGAATTGCAATCTGCCTTCGCCAAGATGTGTTGCTGTTGACGCGGTTGTTGAATGCAACTTGGTCTCTGCTCTTCAGGTGTCTGCCTTTCCAGAGATTATCTTCACTAAAGCAGGGAAAATCTTATACCGTGAGAAGGGATTTGTAAGTGCAGATGAGTTGTCCAAAATAATGGCATTCTTCTACTATGGAGCAGCTAAGCCACCATGTTTAAATGACGTTGGGGATTATCAGGAGGCGATCCCATCAGTTTCTTCCTAA MALQHSLALPSLLLPSSSCKFEGGTLFVSTSSQTTNLLSSWTLESSYPSSISFMKFPFRGGCFRSSSLRAYRTAGSIRPGDGKKKKEQAGMDSDEEVDSSSAKEPDVELMDVEERREWREKIRKVIDMNPNVEEEIDNMERRIKMQKLLADYPLVVEEEDPDWPEDADGWGFNLGQFFDKITIKNKKKDDKYDDDKDDTDNEVVWQDDNYIRPIKDITISEWEEAVFKDISPLILFVHNRYKRPKENEKVREELEKAIHIIWNCNLPSPRCVAVDAVVECNLVSALQVSAFPEIIFTKAGKILYREKGFVSADELSKIMAFFYYGAAKPPCLNDVGDYQEAIPSVSS* Homology
BLAST of Chy5G096910 vs. ExPASy Swiss-Prot
Match: Q9SKB6 (Thioredoxin-like fold domain-containing protein MRL7L, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MRL7L PE=1 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 1.5e-101 Identity = 189/268 (70.52%), Postives = 220/268 (82.09%), Query Frame = 0
BLAST of Chy5G096910 vs. ExPASy Swiss-Prot
Match: Q0DI48 (Thioredoxin-like fold domain-containing protein MRL7L homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MRL7L PE=2 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.7e-71 Identity = 143/263 (54.37%), Postives = 189/263 (71.86%), Query Frame = 0
BLAST of Chy5G096910 vs. ExPASy Swiss-Prot
Match: Q5QLS7 (Thioredoxin-like fold domain-containing protein MRL7 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=MRL7 PE=2 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 2.9e-31 Identity = 87/221 (39.37%), Postives = 123/221 (55.66%), Query Frame = 0
BLAST of Chy5G096910 vs. ExPASy Swiss-Prot
Match: F4JLC1 (Thioredoxin-like fold domain-containing protein MRL7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MRL7 PE=1 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 2.4e-30 Identity = 85/241 (35.27%), Postives = 129/241 (53.53%), Query Frame = 0
BLAST of Chy5G096910 vs. ExPASy TrEMBL
Match: A0A0A0LK68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123060 PE=4 SV=1) HSP 1 Score: 663.3 bits (1710), Expect = 5.6e-187 Identity = 333/347 (95.97%), Postives = 338/347 (97.41%), Query Frame = 0
BLAST of Chy5G096910 vs. ExPASy TrEMBL
Match: A0A5D3BBT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00150 PE=4 SV=1) HSP 1 Score: 634.4 bits (1635), Expect = 2.8e-178 Identity = 318/346 (91.91%), Postives = 331/346 (95.66%), Query Frame = 0
BLAST of Chy5G096910 vs. ExPASy TrEMBL
Match: A0A1S3B4P3 (uncharacterized protein LOC103485750 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485750 PE=4 SV=1) HSP 1 Score: 634.4 bits (1635), Expect = 2.8e-178 Identity = 318/346 (91.91%), Postives = 331/346 (95.66%), Query Frame = 0
BLAST of Chy5G096910 vs. ExPASy TrEMBL
Match: A0A6J1EMP2 (thioredoxin-like fold domain-containing protein MRL7L, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435768 PE=4 SV=1) HSP 1 Score: 558.9 bits (1439), Expect = 1.5e-155 Identity = 284/347 (81.84%), Postives = 312/347 (89.91%), Query Frame = 0
BLAST of Chy5G096910 vs. ExPASy TrEMBL
Match: A0A6J1DK13 (thioredoxin-like fold domain-containing protein MRL7L, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021817 PE=4 SV=1) HSP 1 Score: 558.1 bits (1437), Expect = 2.5e-155 Identity = 279/346 (80.64%), Postives = 306/346 (88.44%), Query Frame = 0
BLAST of Chy5G096910 vs. NCBI nr
Match: XP_004138945.1 (thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucumis sativus] >XP_011649078.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucumis sativus] >KGN61444.1 hypothetical protein Csa_006009 [Cucumis sativus]) HSP 1 Score: 659 bits (1699), Expect = 5.89e-238 Identity = 333/347 (95.97%), Postives = 338/347 (97.41%), Query Frame = 0
BLAST of Chy5G096910 vs. NCBI nr
Match: XP_008441666.1 (PREDICTED: uncharacterized protein LOC103485750 isoform X1 [Cucumis melo] >KAA0032393.1 uncharacterized protein E6C27_scaffold219G002690 [Cucumis melo var. makuwa] >TYJ96356.1 uncharacterized protein E5676_scaffold1159G00150 [Cucumis melo var. makuwa]) HSP 1 Score: 630 bits (1624), Expect = 1.58e-226 Identity = 318/346 (91.91%), Postives = 331/346 (95.66%), Query Frame = 0
BLAST of Chy5G096910 vs. NCBI nr
Match: XP_038876051.1 (thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Benincasa hispida] >XP_038876052.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Benincasa hispida] >XP_038876053.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Benincasa hispida] >XP_038876054.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Benincasa hispida]) HSP 1 Score: 606 bits (1562), Expect = 4.77e-217 Identity = 303/346 (87.57%), Postives = 324/346 (93.64%), Query Frame = 0
BLAST of Chy5G096910 vs. NCBI nr
Match: XP_022929067.1 (thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucurbita moschata] >XP_022929069.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucurbita moschata] >XP_022929070.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucurbita moschata] >XP_022929071.1 thioredoxin-like fold domain-containing protein MRL7L, chloroplastic [Cucurbita moschata]) HSP 1 Score: 554 bits (1428), Expect = 1.27e-196 Identity = 284/347 (81.84%), Postives = 312/347 (89.91%), Query Frame = 0
BLAST of Chy5G096910 vs. NCBI nr
Match: XP_022154590.1 (thioredoxin-like fold domain-containing protein MRL7L, chloroplastic isoform X2 [Momordica charantia]) HSP 1 Score: 553 bits (1426), Expect = 2.65e-196 Identity = 279/346 (80.64%), Postives = 306/346 (88.44%), Query Frame = 0
BLAST of Chy5G096910 vs. TAIR 10
Match: AT2G31840.1 (Thioredoxin superfamily protein ) HSP 1 Score: 370.9 bits (951), Expect = 1.1e-102 Identity = 189/268 (70.52%), Postives = 220/268 (82.09%), Query Frame = 0
BLAST of Chy5G096910 vs. TAIR 10
Match: AT4G28590.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: Thioredoxin superfamily protein (TAIR:AT2G31840.1); Has 114 Blast hits to 112 proteins in 39 species: Archae - 2; Bacteria - 0; Metazoa - 17; Fungi - 6; Plants - 67; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). ) HSP 1 Score: 134.4 bits (337), Expect = 1.7e-31 Identity = 85/241 (35.27%), Postives = 129/241 (53.53%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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