Chy5G096440 (gene) Cucumber (hystrix) v1

Overview
NameChy5G096440
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH05: 7079199 .. 7079606 (-)
RNA-Seq ExpressionChy5G096440
SyntenyChy5G096440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCAAAAAGTGGAAAATGATGAGGAGATTAGTAAAGCTAGGTGGATAGAAGCACAAGAAGGAGCAATTGTTCGTTTAACTCAAGTAATTAATAACTTGACAGGTCTATTAGATAGGATGGAGGTAGCATTAAGGAATCGTCACCAAGGGGAAGTCTTGAACGAAGGAGTTGAAAATGAAGAGGATGAGGATAATGAAACCCTTTTAGCCGGACAAAAGCCAAGAGGGAGGAGAGTGTTAGGCCAAGGTAGAAGAAGAGAAAGAAGAGAGGGAAGAGGCATGTTACCAGAAAGAAGGGTCGAAAGGGAGTACCAAAATGAAAGAAGAGAAGAAAGAGGGACAGGAGGAGTGAAGCACAAAATTCCTACTTTTCACGGGACAACGGATCCGAAGGAATATTTGCAA

mRNA sequence

ATGAATCAAAAAGTGGAAAATGATGAGGAGATTAGTAAAGCTAGGTGGATAGAAGCACAAGAAGGAGCAATTGTTCGTTTAACTCAAGTAATTAATAACTTGACAGGTCTATTAGATAGGATGGAGGTAGCATTAAGGAATCGTCACCAAGGGGAAGTCTTGAACGAAGGAGTTGAAAATGAAGAGGATGAGGATAATGAAACCCTTTTAGCCGGACAAAAGCCAAGAGGGAGGAGAGTGTTAGGCCAAGGTAGAAGAAGAGAAAGAAGAGAGGGAAGAGGCATGTTACCAGAAAGAAGGGTCGAAAGGGAGTACCAAAATGAAAGAAGAGAAGAAAGAGGGACAGGAGGAGTGAAGCACAAAATTCCTACTTTTCACGGGACAACGGATCCGAAGGAATATTTGCAA

Coding sequence (CDS)

ATGAATCAAAAAGTGGAAAATGATGAGGAGATTAGTAAAGCTAGGTGGATAGAAGCACAAGAAGGAGCAATTGTTCGTTTAACTCAAGTAATTAATAACTTGACAGGTCTATTAGATAGGATGGAGGTAGCATTAAGGAATCGTCACCAAGGGGAAGTCTTGAACGAAGGAGTTGAAAATGAAGAGGATGAGGATAATGAAACCCTTTTAGCCGGACAAAAGCCAAGAGGGAGGAGAGTGTTAGGCCAAGGTAGAAGAAGAGAAAGAAGAGAGGGAAGAGGCATGTTACCAGAAAGAAGGGTCGAAAGGGAGTACCAAAATGAAAGAAGAGAAGAAAGAGGGACAGGAGGAGTGAAGCACAAAATTCCTACTTTTCACGGGACAACGGATCCGAAGGAATATTTGCAA

Protein sequence

MNQKVENDEEISKARWIEAQEGAIVRLTQVINNLTGLLDRMEVALRNRHQGEVLNEGVENEEDEDNETLLAGQKPRGRRVLGQGRRRERREGRGMLPERRVEREYQNERREERGTGGVKHKIPTFHGTTDPKEYLQ
Homology
BLAST of Chy5G096440 vs. ExPASy TrEMBL
Match: A0A0A0KC00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G235580 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 8.3e-38
Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 0

Query: 1   MNQKVENDEEISKARWIEAQEGAIVRLTQVINNLTGLLDRMEVALRNRHQGEVLNEGVEN 60
           MN+K +ND +IS+A+ IEAQ GAIVRLTQVIN+LT  LDRMEVALRN HQGEVLNEGVEN
Sbjct: 1   MNKKAKNDGKISEAKRIEAQGGAIVRLTQVINDLTNRLDRMEVALRNHHQGEVLNEGVEN 60

Query: 61  EEDEDNETLLAGQKPRGRRVLGQGRRRERREGRGMLPERRVEREYQNERRE 112
           EEDEDNET LAGQ PRGRRVLGQGRRRERR+ RGMLPERRVE E+QNERR+
Sbjct: 61  EEDEDNETFLAGQNPRGRRVLGQGRRRERRDVRGMLPERRVEVEHQNERRD 111

BLAST of Chy5G096440 vs. ExPASy TrEMBL
Match: A0A5A7UDQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27G00150 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 8.9e-32
Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 0

Query: 41  MEVALRNRHQGEVLNEGVENEEDEDNETLLAGQKPRGRRVLGQGRRRERREGRGMLPERR 100
           M+VALRN HQGEVLNEGVEN+EDEDNET+L GQ P+GRRVLGQ RRRERREG GMLPERR
Sbjct: 1   MKVALRNHHQGEVLNEGVENKEDEDNETILVGQNPKGRRVLGQDRRRERREGMGMLPERR 60

Query: 101 VEREYQNERREERGTGGVKHKIPTFHGTTDPKEYLQ 137
           VEREY+NERRE +G GGVK  I TFH TTD +EYLQ
Sbjct: 61  VEREYENERREGKGMGGVKLTILTFHRTTDLEEYLQ 96

BLAST of Chy5G096440 vs. ExPASy TrEMBL
Match: A0A0A0L0S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G114220 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23
Identity = 65/80 (81.25%), Postives = 69/80 (86.25%), Query Frame = 0

Query: 1  MNQKVENDEEISKARWIEAQEGAIVRLTQVINNLTGLLDRMEVALRNRHQGEVLNEGVEN 60
          MNQK +ND EIS+AR IEAQ GAIVRLTQVIN+LT  LDRM VALRNRHQGEVLNEGVEN
Sbjct: 1  MNQKAKNDGEISEARRIEAQGGAIVRLTQVINDLTDRLDRMNVALRNRHQGEVLNEGVEN 60

Query: 61 EEDEDNETLLAGQKPRGRRV 81
          E+DEDNETLLA Q P  RRV
Sbjct: 61 EKDEDNETLLARQNPTERRV 80

BLAST of Chy5G096440 vs. ExPASy TrEMBL
Match: A0A6J1EHL9 (uncharacterized protein LOC111432615 OS=Cucurbita moschata OX=3662 GN=LOC111432615 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 3.2e-13
Identity = 60/115 (52.17%), Postives = 74/115 (64.35%), Query Frame = 0

Query: 1   MNQKVENDEEISKARWIEAQEGAIVRLTQVINNLTGLLDRMEVALRNRHQGEV-LNEGVE 60
           MNQ   N  EI++ARW EAQ G I RL QVI+ LT  ++R+++AL N    EV LNEGVE
Sbjct: 1   MNQDEGNGGEINEARWREAQVGTITRLNQVISTLTDRMERIQIALGNLQGREVLLNEGVE 60

Query: 61  NEEDEDNETLLAGQKPRGRRVLGQGRRRERREGRGMLPERRVEREYQ-NERREER 114
           NEED DN TLLAG  PRG R +G+GR R RR    +  E ++E  +  N   EER
Sbjct: 61  NEED-DNVTLLAGHSPRGGRDVGRGRGRVRRREEYLQYESKIEHVFDCNNFSEER 114

BLAST of Chy5G096440 vs. ExPASy TrEMBL
Match: A0A6J1ETN1 (uncharacterized protein LOC111436410 OS=Cucurbita moschata OX=3662 GN=LOC111436410 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 8.7e-11
Identity = 48/80 (60.00%), Postives = 55/80 (68.75%), Query Frame = 0

Query: 1  MNQKVENDEEISKARWIEAQEGAIVRLTQVINNLTGLLDRMEVALRNRHQGEV-LNEGVE 60
          MNQ   N  EI++ARW EAQ G I  L QVI+ LT  ++R+E+AL N    EV LNEGVE
Sbjct: 1  MNQDGGNGREINEARWREAQVGTITCLNQVISTLTDRMERIEIALGNLQGREVLLNEGVE 60

Query: 61 NEEDEDNETLLAGQKPRGRR 80
          NEED DN TLLAG  PRG R
Sbjct: 61 NEED-DNVTLLAGHSPRGGR 79

BLAST of Chy5G096440 vs. NCBI nr
Match: KAE8646857.1 (hypothetical protein Csa_020829, partial [Cucumis sativus])

HSP 1 Score: 209 bits (531), Expect = 9.22e-67
Identity = 115/136 (84.56%), Postives = 122/136 (89.71%), Query Frame = 0

Query: 1   MNQKVENDEEISKARWIEAQEGAIVRLTQVINNLTGLLDRMEVALRNRHQGEVLNEGVEN 60
           MNQK +N  EIS+AR IEAQ GAIVRLTQVIN+LT  LDR+EVALRNRHQG+VLNEGVEN
Sbjct: 1   MNQKTKNSGEISEARRIEAQGGAIVRLTQVINDLTDRLDRIEVALRNRHQGQVLNEGVEN 60

Query: 61  EEDEDNETLLAGQKPRGRRVLGQGRRRERREGRGMLPERRVEREYQNERREERGTGGVKH 120
           EEDEDNETLLA Q  RGRRVLGQGRRRERREGR MLPERRVEREYQNERREERG GGVK 
Sbjct: 61  EEDEDNETLLAIQNLRGRRVLGQGRRRERREGRDMLPERRVEREYQNERREERGIGGVKL 120

Query: 121 KIPTFHGTTDPKEYLQ 136
           KIPTFH TT+P+EYLQ
Sbjct: 121 KIPTFHETTNPEEYLQ 136

BLAST of Chy5G096440 vs. NCBI nr
Match: KGN47250.1 (hypothetical protein Csa_016986 [Cucumis sativus])

HSP 1 Score: 165 bits (418), Expect = 4.57e-50
Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 0

Query: 1   MNQKVENDEEISKARWIEAQEGAIVRLTQVINNLTGLLDRMEVALRNRHQGEVLNEGVEN 60
           MN+K +ND +IS+A+ IEAQ GAIVRLTQVIN+LT  LDRMEVALRN HQGEVLNEGVEN
Sbjct: 1   MNKKAKNDGKISEAKRIEAQGGAIVRLTQVINDLTNRLDRMEVALRNHHQGEVLNEGVEN 60

Query: 61  EEDEDNETLLAGQKPRGRRVLGQGRRRERREGRGMLPERRVEREYQNERRE 111
           EEDEDNET LAGQ PRGRRVLGQGRRRERR+ RGMLPERRVE E+QNERR+
Sbjct: 61  EEDEDNETFLAGQNPRGRRVLGQGRRRERRDVRGMLPERRVEVEHQNERRD 111

BLAST of Chy5G096440 vs. NCBI nr
Match: KAA0053330.1 (hypothetical protein E6C27_scaffold27G00150 [Cucumis melo var. makuwa])

HSP 1 Score: 144 bits (364), Expect = 4.94e-42
Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 0

Query: 41  MEVALRNRHQGEVLNEGVENEEDEDNETLLAGQKPRGRRVLGQGRRRERREGRGMLPERR 100
           M+VALRN HQGEVLNEGVEN+EDEDNET+L GQ P+GRRVLGQ RRRERREG GMLPERR
Sbjct: 1   MKVALRNHHQGEVLNEGVENKEDEDNETILVGQNPKGRRVLGQDRRRERREGMGMLPERR 60

Query: 101 VEREYQNERREERGTGGVKHKIPTFHGTTDPKEYLQ 136
           VEREY+NERRE +G GGVK  I TFH TTD +EYLQ
Sbjct: 61  VEREYENERREGKGMGGVKLTILTFHRTTDLEEYLQ 96

BLAST of Chy5G096440 vs. NCBI nr
Match: XP_023534142.1 (uncharacterized protein LOC111795765 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 138 bits (348), Expect = 1.45e-35
Identity = 83/137 (60.58%), Postives = 99/137 (72.26%), Query Frame = 0

Query: 1   MNQKVENDEEISKARWIEAQEGAIVRLTQVINNLTGLLDRMEVALRNRHQGEVL-NEGVE 60
           MNQ   N  EI++ARW EAQ G I RL QVI+ LT  ++R+E+AL N    EVL NEGVE
Sbjct: 1   MNQDGGNGGEINEARWREAQVGTITRLNQVISTLTDRMERIEIALGNLQGREVLLNEGVE 60

Query: 61  NEEDEDNETLLAGQKPRGRRVLGQGRRRERREGRGMLPERRVEREYQNERREERGTGGVK 120
           NEED DN TLLAG  PRG R +G+GR R RR GR +L  +R+EREYQ ER  E+G  GVK
Sbjct: 61  NEED-DNVTLLAGHSPRGGRDVGRGRGRVRRRGREILAPKRIEREYQYERENEKGVWGVK 120

Query: 121 HKIPTFHGTTDPKEYLQ 136
            KIPTF+G +DP+EYLQ
Sbjct: 121 LKIPTFYGRSDPEEYLQ 136

BLAST of Chy5G096440 vs. NCBI nr
Match: XP_038888883.1 (uncharacterized protein LOC120078660 [Benincasa hispida])

HSP 1 Score: 134 bits (336), Expect = 2.99e-33
Identity = 80/128 (62.50%), Postives = 92/128 (71.88%), Query Frame = 0

Query: 10  EISKARWIEAQEGAIVRLTQVINNLTGLLDRMEVALRNRHQGEV-LNEGVENEEDEDNET 69
           E S+AR+ EAQ G I RLT+V+ +L   ++RMEVALRN  QGE+  NE  +NEED+DNET
Sbjct: 10  ETSEARYREAQVGVITRLTKVVKSLIDRVERMEVALRNPQQGEMGCNEEFDNEEDDDNET 69

Query: 70  LLAGQKPRGRRVLGQGRRRERREGRGMLPERRVEREYQNERREERGTGGVKHKIPTFHGT 129
           LL GQ  RG  VLG+GR   RR  R +L  R VEREYQNER EE G GGVK  IPTFHGT
Sbjct: 70  LLVGQNSRGMGVLGRGR--GRRRERNILQPRMVEREYQNERGEETGIGGVKLAIPTFHGT 129

Query: 130 TDPKEYLQ 136
            DPK YLQ
Sbjct: 130 MDPKGYLQ 135

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KC008.3e-3881.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G235580 PE=4 SV=1[more]
A0A5A7UDQ98.9e-3280.21Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0L0S31.5e-2381.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G114220 PE=4 SV=1[more]
A0A6J1EHL93.2e-1352.17uncharacterized protein LOC111432615 OS=Cucurbita moschata OX=3662 GN=LOC1114326... [more]
A0A6J1ETN18.7e-1160.00uncharacterized protein LOC111436410 OS=Cucurbita moschata OX=3662 GN=LOC1114364... [more]
Match NameE-valueIdentityDescription
KAE8646857.19.22e-6784.56hypothetical protein Csa_020829, partial [Cucumis sativus][more]
KGN47250.14.57e-5081.98hypothetical protein Csa_016986 [Cucumis sativus][more]
KAA0053330.14.94e-4280.21hypothetical protein E6C27_scaffold27G00150 [Cucumis melo var. makuwa][more]
XP_023534142.11.45e-3560.58uncharacterized protein LOC111795765 [Cucurbita pepo subsp. pepo][more]
XP_038888883.12.99e-3362.50uncharacterized protein LOC120078660 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy5G096440.1Chy5G096440.1mRNA