Chy5G096440 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCAAAAAGTGGAAAATGATGAGGAGATTAGTAAAGCTAGGTGGATAGAAGCACAAGAAGGAGCAATTGTTCGTTTAACTCAAGTAATTAATAACTTGACAGGTCTATTAGATAGGATGGAGGTAGCATTAAGGAATCGTCACCAAGGGGAAGTCTTGAACGAAGGAGTTGAAAATGAAGAGGATGAGGATAATGAAACCCTTTTAGCCGGACAAAAGCCAAGAGGGAGGAGAGTGTTAGGCCAAGGTAGAAGAAGAGAAAGAAGAGAGGGAAGAGGCATGTTACCAGAAAGAAGGGTCGAAAGGGAGTACCAAAATGAAAGAAGAGAAGAAAGAGGGACAGGAGGAGTGAAGCACAAAATTCCTACTTTTCACGGGACAACGGATCCGAAGGAATATTTGCAA ATGAATCAAAAAGTGGAAAATGATGAGGAGATTAGTAAAGCTAGGTGGATAGAAGCACAAGAAGGAGCAATTGTTCGTTTAACTCAAGTAATTAATAACTTGACAGGTCTATTAGATAGGATGGAGGTAGCATTAAGGAATCGTCACCAAGGGGAAGTCTTGAACGAAGGAGTTGAAAATGAAGAGGATGAGGATAATGAAACCCTTTTAGCCGGACAAAAGCCAAGAGGGAGGAGAGTGTTAGGCCAAGGTAGAAGAAGAGAAAGAAGAGAGGGAAGAGGCATGTTACCAGAAAGAAGGGTCGAAAGGGAGTACCAAAATGAAAGAAGAGAAGAAAGAGGGACAGGAGGAGTGAAGCACAAAATTCCTACTTTTCACGGGACAACGGATCCGAAGGAATATTTGCAA ATGAATCAAAAAGTGGAAAATGATGAGGAGATTAGTAAAGCTAGGTGGATAGAAGCACAAGAAGGAGCAATTGTTCGTTTAACTCAAGTAATTAATAACTTGACAGGTCTATTAGATAGGATGGAGGTAGCATTAAGGAATCGTCACCAAGGGGAAGTCTTGAACGAAGGAGTTGAAAATGAAGAGGATGAGGATAATGAAACCCTTTTAGCCGGACAAAAGCCAAGAGGGAGGAGAGTGTTAGGCCAAGGTAGAAGAAGAGAAAGAAGAGAGGGAAGAGGCATGTTACCAGAAAGAAGGGTCGAAAGGGAGTACCAAAATGAAAGAAGAGAAGAAAGAGGGACAGGAGGAGTGAAGCACAAAATTCCTACTTTTCACGGGACAACGGATCCGAAGGAATATTTGCAA MNQKVENDEEISKARWIEAQEGAIVRLTQVINNLTGLLDRMEVALRNRHQGEVLNEGVENEEDEDNETLLAGQKPRGRRVLGQGRRRERREGRGMLPERRVEREYQNERREERGTGGVKHKIPTFHGTTDPKEYLQ Homology
BLAST of Chy5G096440 vs. ExPASy TrEMBL
Match: A0A0A0KC00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G235580 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 8.3e-38 Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of Chy5G096440 vs. ExPASy TrEMBL
Match: A0A5A7UDQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27G00150 PE=4 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 8.9e-32 Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 0
BLAST of Chy5G096440 vs. ExPASy TrEMBL
Match: A0A0A0L0S3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G114220 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.5e-23 Identity = 65/80 (81.25%), Postives = 69/80 (86.25%), Query Frame = 0
BLAST of Chy5G096440 vs. ExPASy TrEMBL
Match: A0A6J1EHL9 (uncharacterized protein LOC111432615 OS=Cucurbita moschata OX=3662 GN=LOC111432615 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 3.2e-13 Identity = 60/115 (52.17%), Postives = 74/115 (64.35%), Query Frame = 0
BLAST of Chy5G096440 vs. ExPASy TrEMBL
Match: A0A6J1ETN1 (uncharacterized protein LOC111436410 OS=Cucurbita moschata OX=3662 GN=LOC111436410 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 8.7e-11 Identity = 48/80 (60.00%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Chy5G096440 vs. NCBI nr
Match: KAE8646857.1 (hypothetical protein Csa_020829, partial [Cucumis sativus]) HSP 1 Score: 209 bits (531), Expect = 9.22e-67 Identity = 115/136 (84.56%), Postives = 122/136 (89.71%), Query Frame = 0
BLAST of Chy5G096440 vs. NCBI nr
Match: KGN47250.1 (hypothetical protein Csa_016986 [Cucumis sativus]) HSP 1 Score: 165 bits (418), Expect = 4.57e-50 Identity = 91/111 (81.98%), Postives = 100/111 (90.09%), Query Frame = 0
BLAST of Chy5G096440 vs. NCBI nr
Match: KAA0053330.1 (hypothetical protein E6C27_scaffold27G00150 [Cucumis melo var. makuwa]) HSP 1 Score: 144 bits (364), Expect = 4.94e-42 Identity = 77/96 (80.21%), Postives = 84/96 (87.50%), Query Frame = 0
BLAST of Chy5G096440 vs. NCBI nr
Match: XP_023534142.1 (uncharacterized protein LOC111795765 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 138 bits (348), Expect = 1.45e-35 Identity = 83/137 (60.58%), Postives = 99/137 (72.26%), Query Frame = 0
BLAST of Chy5G096440 vs. NCBI nr
Match: XP_038888883.1 (uncharacterized protein LOC120078660 [Benincasa hispida]) HSP 1 Score: 134 bits (336), Expect = 2.99e-33 Identity = 80/128 (62.50%), Postives = 92/128 (71.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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