Chy5G095940 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G095940
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	RING-type domain-containing protein
Location	chrH05: 5911180 .. 5911854 (-)
RNA-Seq Expression	Chy5G095940
Synteny	Chy5G095940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCTCTGCTACTTCATGCGTCCAATGTTCTTTCTCCGGCTATCCAAACACCGATGAGACCCTCATTGTTCGATTTAGGTTTTGTAGCCGCCTGATTTCCCAATCTCTCGCTCCTGATATTGTTCCAGATGTAATTTTGGAACAGACCCCTTTCACTCTCATAGGTGAGGCTCTGTTTTCTCTTTCTAATCTGCAGTATCCTCTACAACAACAAGAATTGGAGTATCTGGTGAATGAGTTTCTGAGTTCGTTCAATCTCCGTTCCTCCGTCTGCCGAATCATATCCCAAAACATTCTATCATTTGCCCAACAGTTCGACATAAATAACGAGTGCTTCAAAATAGAAACGAACGTCGATTACATAAAGGAGTATTGGACGGAGGCTGCCCCTGAATTATACCCCATCTCCACCGTAGGAGAGGAAGGTCTTCCACCGAGAGGGGCGTCGGAGTCGGCTATCGAGAGAGTAAAGAAGCAAAAATTTGATGGGTTTAGGGGAGAAGAAGAAGAAGAAATTGGAGATTGCAGTGTTTGCTGTGAAGAGATAAAAAGAAAGGGAGAGGAGGTGAGAAGGATTCCATGCGGTCATGTGTATCACAAATCGTGCATCCTCAAATGGCTTGAAATTAGTAACTCCTGCCCATTGTGTAGGGCAGCGTTGGAACCATGA

mRNA sequence

ATGTCTTTCTCTGCTACTTCATGCGTCCAATGTTCTTTCTCCGGCTATCCAAACACCGATGAGACCCTCATTGTTCGATTTAGGTTTTGTAGCCGCCTGATTTCCCAATCTCTCGCTCCTGATATTGTTCCAGATGTAATTTTGGAACAGACCCCTTTCACTCTCATAGGTGAGGCTCTGTTTTCTCTTTCTAATCTGCAGTATCCTCTACAACAACAAGAATTGGAGTATCTGGTGAATGAGTTTCTGAGTTCGTTCAATCTCCGTTCCTCCGTCTGCCGAATCATATCCCAAAACATTCTATCATTTGCCCAACAGTTCGACATAAATAACGAGTGCTTCAAAATAGAAACGAACGTCGATTACATAAAGGAGTATTGGACGGAGGCTGCCCCTGAATTATACCCCATCTCCACCGTAGGAGAGGAAGGTCTTCCACCGAGAGGGGCGTCGGAGTCGGCTATCGAGAGAGTAAAGAAGCAAAAATTTGATGGGTTTAGGGGAGAAGAAGAAGAAGAAATTGGAGATTGCAGTGTTTGCTGTGAAGAGATAAAAAGAAAGGGAGAGGAGGTGAGAAGGATTCCATGCGGTCATGTGTATCACAAATCGTGCATCCTCAAATGGCTTGAAATTAGTAACTCCTGCCCATTGTGTAGGGCAGCGTTGGAACCATGA

Coding sequence (CDS)

ATGTCTTTCTCTGCTACTTCATGCGTCCAATGTTCTTTCTCCGGCTATCCAAACACCGATGAGACCCTCATTGTTCGATTTAGGTTTTGTAGCCGCCTGATTTCCCAATCTCTCGCTCCTGATATTGTTCCAGATGTAATTTTGGAACAGACCCCTTTCACTCTCATAGGTGAGGCTCTGTTTTCTCTTTCTAATCTGCAGTATCCTCTACAACAACAAGAATTGGAGTATCTGGTGAATGAGTTTCTGAGTTCGTTCAATCTCCGTTCCTCCGTCTGCCGAATCATATCCCAAAACATTCTATCATTTGCCCAACAGTTCGACATAAATAACGAGTGCTTCAAAATAGAAACGAACGTCGATTACATAAAGGAGTATTGGACGGAGGCTGCCCCTGAATTATACCCCATCTCCACCGTAGGAGAGGAAGGTCTTCCACCGAGAGGGGCGTCGGAGTCGGCTATCGAGAGAGTAAAGAAGCAAAAATTTGATGGGTTTAGGGGAGAAGAAGAAGAAGAAATTGGAGATTGCAGTGTTTGCTGTGAAGAGATAAAAAGAAAGGGAGAGGAGGTGAGAAGGATTCCATGCGGTCATGTGTATCACAAATCGTGCATCCTCAAATGGCTTGAAATTAGTAACTCCTGCCCATTGTGTAGGGCAGCGTTGGAACCATGA

Protein sequence

MSFSATSCVQCSFSGYPNTDETLIVRFRFCSRLISQSLAPDIVPDVILEQTPFTLIGEALFSLSNLQYPLQQQELEYLVNEFLSSFNLRSSVCRIISQNILSFAQQFDINNECFKIETNVDYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVCCEEIKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP*

Homology

[Close]

BLAST of Chy5G095940 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-11
Identity = 45/137 (32.85%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 87  NLRSSVCRIISQNILSFAQQFDINNECFKIETNV-DYIKEYWTEAAPELYPISTVGEEGL 146
           +LRSS  +I       F  Q + +++ F++  N+ DY      E   +    +     G 
Sbjct: 143 DLRSSGAQI------EFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGT 202

Query: 147 PPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVCCEEIKRKGEEVRRIPCGHVYHKSCI 206
           PP  AS+SAIE +        +     E   C+VC ++ + +G E +++PC H+YHK C+
Sbjct: 203 PP--ASKSAIEALPLVNIT--KSNLNSEFNQCAVCMDDFE-EGTEAKQMPCKHLYHKDCL 262

Query: 207 LKWLEISNSCPLCRAAL 223
           L WLE+ NSCP+CR  L
Sbjct: 263 LPWLELHNSCPVCRHEL 268

[Close]

BLAST of Chy5G095940 vs. ExPASy Swiss-Prot
Match: Q5R476 (E3 ubiquitin-protein ligase Arkadia OS=Pongo abelii OX=9601 GN=RNF111 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.2e-11
Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 0


Query: 148 RGASESAIER------VKKQKF----DGFRGEEEEEIGDCSVCCEEIKRKGEEVRRIPCG 207
           RGAS+  IER       KK+K     DG  G EE+    C++C   I  +GE+VRR+PC 
Sbjct: 895 RGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICL-SILEEGEDVRRLPCM 954

Query: 208 HVYHKSCILKWLEISNSCPLCRAALE 224
           H++H+ C+ +WL  +  CP+CR  +E
Sbjct: 955 HLFHQVCVDQWLITNKKCPICRVDIE 979

[Close]

BLAST of Chy5G095940 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 144 GLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVCCEEIKRKGEEVRRIPCGHVYHKS 203
           G PP  AS+SAI+ +   K    +   + E+  C+VC +E +  G +V+++PC HV+H+ 
Sbjct: 187 GTPP--ASKSAIDALPTVKVT--KDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQD 246

Query: 204 CILKWLEISNSCPLCRAAL 223
           C+L WLE+ NSCP+CR  L
Sbjct: 247 CLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of Chy5G095940 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.0e-10
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 140 VGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVCCEEIKRKGEEVRRIPCGHV 199
           +G  G PP  AS+SAIE + + +      + E    +C+V C E+   G E R +PC H+
Sbjct: 183 IGRSGNPP--ASKSAIESLPRVEISDCHTKAE---ANCAV-CTEVFEAGIEGREMPCKHI 242

Query: 200 YHKSCILKWLEISNSCPLCRAAL 223
           +H  CI+ WL I NSCP+CR  L
Sbjct: 243 FHGDCIVPWLSIRNSCPVCRFEL 259

[Close]

BLAST of Chy5G095940 vs. ExPASy Swiss-Prot
Match: Q6ZSG1 (E3 ubiquitin-protein ligase RNF165 OS=Homo sapiens OX=9606 GN=RNF165 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.0e-10
Identity = 51/194 (26.29%), Postives = 88/194 (45.36%), Query Frame = 0


Query: 44  PDVILEQTPFTLIGEALFSLSNLQY-PLQQQELEYLVNEFLSSFNLRSSVCRIISQNILS 103
           P  + E T + L  +A  S +  Q  P+ Q    YL    +  F   SS  +++   I +
Sbjct: 153 PRYLAEGTDWDLSVDAGLSPAQFQVRPIPQHYQHYLATPRMHHFPRNSSSTQMVVHEIRN 212

Query: 104 --FAQQFDINNECFKIETNVDYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERV-- 163
             + Q   +  +      +   ++E + E       +      G   RGA ++ IER   
Sbjct: 213 YPYPQLHFLALQGLNPSRHTSAVRESYEEL------LQLEDRLGNVTRGAVQNTIERFTF 272

Query: 164 -----KKQKFDG----FRGEEEEEIGDCSVCCEEIKRKGEEVRRIPCGHVYHKSCILKWL 223
                K++  DG      GEE +    C++C   ++  GE+VRR+PC H++H+ C+ +WL
Sbjct: 273 PHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLE-DGEDVRRLPCMHLFHQLCVDQWL 332

[Close]

BLAST of Chy5G095940 vs. ExPASy TrEMBL
Match: A0A0A0LHS2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.2e-121
Identity = 216/224 (96.43%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MSFSATSCVQCSFSGYPNTDETLIVRFRFCSRLISQSLAPDIVPDVILEQTPFTLIGEAL 60
           MSFSATSCVQCSFSGYPNTD+TLIVR RFCSRLISQSLAP+IVPDVILEQTPFTLIGEAL
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  FSLSNLQYPLQQQELEYLVNEFLSSFNLRSSVCRIISQNILSFAQQFDINNECFKIETNV 120
           FSLSNLQYPLQQQELEY+VNEFL SFNLRSSVCRI+S NILSFAQQFDINNECFKIETNV
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVC 180
           DYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVC
Sbjct: 121 DYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVC 180

Query: 181 CEEIKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 225
           CEEIKRKG EVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP
Sbjct: 181 CEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of Chy5G095940 vs. ExPASy TrEMBL
Match: A0A5D3CSM6 (RING finger protein 165-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00260 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 5.7e-108
Identity = 197/224 (87.95%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 1   MSFSATSCVQCSFSGYPNTDETLIVRFRFCSRLISQSLAPDIVPDVILEQTPFTLIGEAL 60
           MSFSATSC++CSFSGYPNTD+TLIVRF  CSRLISQS +P+I+PDVILEQTPFTLIGEAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FSLSNLQYPLQQQELEYLVNEFLSSFNLRSSVCRIISQNILSFAQQFDINNECFKIETNV 120
           FSLSNL+ PLQQQEL+YLVNEFL SFNLRSSVCRIIS NILSFAQQFDINNE  KIE NV
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVC 180
           D+IKEYWTEA PEL PISTVGEEGL PRGASESAIERVKKQK D F  EEEEEIGDC VC
Sbjct: 121 DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC 180

Query: 181 CEEIKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 225
           CEE+KRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP
Sbjct: 181 CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of Chy5G095940 vs. ExPASy TrEMBL
Match: A0A1S3C5T8 (RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103497006 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 5.7e-108
Identity = 197/224 (87.95%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 1   MSFSATSCVQCSFSGYPNTDETLIVRFRFCSRLISQSLAPDIVPDVILEQTPFTLIGEAL 60
           MSFSATSC++CSFSGYPNTD+TLIVRF  CSRLISQS +P+I+PDVILEQTPFTLIGEAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FSLSNLQYPLQQQELEYLVNEFLSSFNLRSSVCRIISQNILSFAQQFDINNECFKIETNV 120
           FSLSNL+ PLQQQEL+YLVNEFL SFNLRSSVCRIIS NILSFAQQFDINNE  KIE NV
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVC 180
           D+IKEYWTEA PEL PISTVGEEGL PRGASESAIERVKKQK D F  EEEEEIGDC VC
Sbjct: 121 DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC 180

Query: 181 CEEIKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 225
           CEE+KRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP
Sbjct: 181 CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of Chy5G095940 vs. ExPASy TrEMBL
Match: A0A5A7TNB0 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00200 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.8e-54
Identity = 127/233 (54.51%), Postives = 154/233 (66.09%), Query Frame = 0


Query: 1   MSFSATSCVQCSFSGYPNTDETLIVRFRFCSRLISQSLAPDIVPDVILEQTPFTLIGEAL 60
           MS S +S  QCSFS  PNTD  LI RF + SRL        I+ D IL+QTP  L+GE L
Sbjct: 95  MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRL--------IIVDQILQQTPSILMGETL 154

Query: 61  FSLSNLQYPLQQQELEYLVNEFLSSFNLRS--SVCRIISQNILSFAQQFDINNECFKIET 120
              SNL +P QQQ +E+LVNEFL SFNL S  S  R I + ILSFA QF   +  FKIE 
Sbjct: 155 IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 214

Query: 121 NVDYIKEYWTEAAPELYPISTVGEEGL-----PPR--GASESAIERVKKQKFDGFRGEEE 180
           NV+++++              +GE+G      PPR  GA ESAIER++K+KFD     +E
Sbjct: 215 NVEHVEDL------------IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVL--NKE 274

Query: 181 EEIGDCSVCCEEIKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 225
           EEIGDCSVC EE+K +G+EV RIPCGHVYHKSCIL WL+I+NSCPLCRA L+P
Sbjct: 275 EEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQP 305

[Close]

BLAST of Chy5G095940 vs. ExPASy TrEMBL
Match: A0A5D3CVT7 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00140 PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.3e-45
Identity = 102/175 (58.29%), Postives = 123/175 (70.29%), Query Frame = 0


Query: 56  IGEALFSLSNLQYPLQQQELEYLVNEFLSSFNLRSSVCRIISQNILSFAQQFDINNECFK 115
           +G+ L   SNL++P QQQ +++LVN+FL SFNL SSV R I   ILSFA QF      FK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 116 IETNVDYIKEYWTEAAPELYPISTVGEEGL----PP--RGASESAIER-VKKQKFDGFRG 175
           IE N+D++++              +GE+G     PP  RGA ESAIER + KQKFDGF  
Sbjct: 61  IEANIDHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNK 120

Query: 176 EEEEEIGDCSVCCEEIKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 224
           EEEEEIGDCSVC EE+K KG+EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 121 EEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 163

[Close]

BLAST of Chy5G095940 vs. NCBI nr
Match: XP_004139003.1 (E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN61460.1 hypothetical protein Csa_005955 [Cucumis sativus])

HSP 1 Score: 446 bits (1148), Expect = 4.28e-158
Identity = 216/224 (96.43%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MSFSATSCVQCSFSGYPNTDETLIVRFRFCSRLISQSLAPDIVPDVILEQTPFTLIGEAL 60
           MSFSATSCVQCSFSGYPNTD+TLIVR RFCSRLISQSLAP+IVPDVILEQTPFTLIGEAL
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  FSLSNLQYPLQQQELEYLVNEFLSSFNLRSSVCRIISQNILSFAQQFDINNECFKIETNV 120
           FSLSNLQYPLQQQELEY+VNEFL SFNLRSSVCRI+S NILSFAQQFDINNECFKIETNV
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVC 180
           DYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVC
Sbjct: 121 DYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVC 180

Query: 181 CEEIKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224
           CEEIKRKG EVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP
Sbjct: 181 CEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of Chy5G095940 vs. NCBI nr
Match: XP_008457277.1 (PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0033274.1 RING finger protein 165-like [Cucumis melo var. makuwa] >TYK14831.1 RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 401 bits (1030), Expect = 4.17e-140
Identity = 197/224 (87.95%), Postives = 207/224 (92.41%), Query Frame = 0


Query: 1   MSFSATSCVQCSFSGYPNTDETLIVRFRFCSRLISQSLAPDIVPDVILEQTPFTLIGEAL 60
           MSFSATSC++CSFSGYPNTD+TLIVRF  CSRLISQS +P+I+PDVILEQTPFTLIGEAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FSLSNLQYPLQQQELEYLVNEFLSSFNLRSSVCRIISQNILSFAQQFDINNECFKIETNV 120
           FSLSNL+ PLQQQEL+YLVNEFL SFNLRSSVCRIIS NILSFAQQFDINNE  KIE NV
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DYIKEYWTEAAPELYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVC 180
           D+IKEYWTEA PEL PISTVGEEGL PRGASESAIERVKKQK D F  EEEEEIGDC VC
Sbjct: 121 DHIKEYWTEAPPELNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDCCVC 180

Query: 181 CEEIKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224
           CEE+KRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP
Sbjct: 181 CEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224

[Close]

BLAST of Chy5G095940 vs. NCBI nr
Match: XP_038876917.1 (E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida])

HSP 1 Score: 278 bits (712), Expect = 1.48e-91
Identity = 143/234 (61.11%), Postives = 173/234 (73.93%), Query Frame = 0


Query: 1   MSFSATSCVQCSFSGYPNTDETLIVRFRFCSRLISQSLAPDIVPDVILEQTPFTLIGEAL 60
           MSFS TS +   F G PN+D+ L VRF  CSRLIS+S +P I+PD IL+QT  T IGEAL
Sbjct: 1   MSFSTTSSIAYYFHGTPNSDQVLQVRFGVCSRLISRSPSPGIIPDRILQQTRSTPIGEAL 60

Query: 61  FSLSNLQYPLQQQELEYLVNEFLSSFNLRSSVCRIISQNILSFAQQFDINNECFKIETNV 120
           F  +N++   ++  +E+LVN FL SFNL SSVC+++S+ ILSFAQQFD NN  FKIE N+
Sbjct: 61  FPFTNVRDVGEEAAVEFLVNGFLRSFNLHSSVCQMMSRKILSFAQQFDANNGSFKIEANI 120

Query: 121 DYIKEYWTEAAPELYPISTVGEEGL--------PPR---GASESAIERVKKQKFDGFRGE 180
           DY+KE+W EA   L+P S +GEEG         PP    GA ESAIERV+KQKFDGF+  
Sbjct: 121 DYMKEFWMEAVSWLHPNSIIGEEGFEINFEEGPPPARRAGAPESAIERVRKQKFDGFK-- 180

Query: 181 EEEEIGDCSVCCEEIKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223
           EEEE G+C VCCE++KRKG EV RIPCGHVYHKSCIL WLE SN+CPLCR +LE
Sbjct: 181 EEEETGECCVCCEDLKRKGMEVSRIPCGHVYHKSCILTWLERSNTCPLCRRSLE 232

[Close]

BLAST of Chy5G095940 vs. NCBI nr
Match: KAA0043526.1 (RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 223 bits (569), Expect = 7.08e-69
Identity = 127/233 (54.51%), Postives = 154/233 (66.09%), Query Frame = 0


Query: 1   MSFSATSCVQCSFSGYPNTDETLIVRFRFCSRLISQSLAPDIVPDVILEQTPFTLIGEAL 60
           MS S +S  QCSFS  PNTD  LI RF + SRLI        + D IL+QTP  L+GE L
Sbjct: 95  MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRLI--------IVDQILQQTPSILMGETL 154

Query: 61  FSLSNLQYPLQQQELEYLVNEFLSSFNLRS--SVCRIISQNILSFAQQFDINNECFKIET 120
              SNL +P QQQ +E+LVNEFL SFNL S  S  R I + ILSFA QF   +  FKIE 
Sbjct: 155 IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 214

Query: 121 NVDYIKEYWTEAAPELYPISTVGEEGL-----PPR--GASESAIERVKKQKFDGFRGEEE 180
           NV+++++              +GE+G      PPR  GA ESAIER++K+KFD     +E
Sbjct: 215 NVEHVEDL------------IIGEQGFQETPSPPRTTGAPESAIERLRKEKFDVLN--KE 274

Query: 181 EEIGDCSVCCEEIKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALEP 224
           EEIGDCSVC EE+K +G+EV RIPCGHVYHKSCIL WL+I+NSCPLCRA L+P
Sbjct: 275 EEIGDCSVCYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQP 305

[Close]

BLAST of Chy5G095940 vs. NCBI nr
Match: XP_008442291.1 (PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0041218.1 RING finger protein 165-like protein [Cucumis melo var. makuwa] >TYK16021.1 RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 193 bits (490), Expect = 7.69e-59
Identity = 102/175 (58.29%), Postives = 123/175 (70.29%), Query Frame = 0


Query: 56  IGEALFSLSNLQYPLQQQELEYLVNEFLSSFNLRSSVCRIISQNILSFAQQFDINNECFK 115
           +G+ L   SNL++P QQQ +++LVN+FL SFNL SSV R I   ILSFA QF      FK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 116 IETNVDYIKEYWTEAAPELYPISTVGEEGL----PPR--GASESAIER-VKKQKFDGFRG 175
           IE N+D++++              +GE+G     PPR  GA ESAIER + KQKFDGF  
Sbjct: 61  IEANIDHVEDL------------IIGEQGFQETPPPRTRGAPESAIERLIMKQKFDGFNK 120

Query: 176 EEEEEIGDCSVCCEEIKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223
           EEEEEIGDCSVC EE+K KG+EV RIPCGHVYHKSC+L WL+I+NSCPLCRA LE
Sbjct: 121 EEEEEIGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLE 163

[Close]

BLAST of Chy5G095940 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 9.8e-12
Identity = 33/79 (41.77%), Postives = 51/79 (64.56%), Query Frame = 0


Query: 144 GLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVCCEEIKRKGEEVRRIPCGHVYHKS 203
           G PP  AS+SAI+ +   K    +   + E+  C+VC +E +  G +V+++PC HV+H+ 
Sbjct: 187 GTPP--ASKSAIDALPTVKVT--KDMLKSEMNQCAVCMDEFE-DGSDVKQMPCKHVFHQD 246

Query: 204 CILKWLEISNSCPLCRAAL 223
           C+L WLE+ NSCP+CR  L
Sbjct: 247 CLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of Chy5G095940 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 65.5 bits (158), Expect = 6.4e-11
Identity = 34/83 (40.96%), Postives = 48/83 (57.83%), Query Frame = 0


Query: 140 VGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVCCEEIKRKGEEVRRIPCGHV 199
           +G  G PP  AS+SAIE + + +      + E    +C+V C E+   G E R +PC H+
Sbjct: 183 IGRSGNPP--ASKSAIESLPRVEISDCHTKAE---ANCAV-CTEVFEAGIEGREMPCKHI 242

Query: 200 YHKSCILKWLEISNSCPLCRAAL 223
           +H  CI+ WL I NSCP+CR  L
Sbjct: 243 FHGDCIVPWLSIRNSCPVCRFEL 259

[Close]

BLAST of Chy5G095940 vs. TAIR 10
Match: AT5G37200.1 (RING/U-box superfamily protein )

HSP 1 Score: 65.1 bits (157), Expect = 8.3e-11
Identity = 31/74 (41.89%), Postives = 47/74 (63.51%), Query Frame = 0


Query: 148 RGASESAIER-VKKQKFDGFRGEEEEEIGDCSVCCEEIKRKGEEVRRIP-CGHVYHKSCI 207
           RGAS     R V++Q+ +    EEE+E   CS+C E+     E++ R+P C H++H+ C+
Sbjct: 131 RGASGEVFHRLVEEQRVESADLEEEDE--TCSICIEKFSESHEDIIRVPDCLHLFHQGCL 190

Query: 208 LKWLEISNSCPLCR 220
            +WL + NSCPLCR
Sbjct: 191 FEWLGLQNSCPLCR 202

[Close]

BLAST of Chy5G095940 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-10
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 0


Query: 140 VGEEGLPPRGASESAIERVKKQKF-DGFRGEEEEEIGDCSVCCEEIKRKGEEVRRIPCGH 199
           +G  G PP  AS+SAIE + + +  D   G E     +C+V C EI     E R +PC H
Sbjct: 167 IGRSGNPP--ASKSAIESLPRVEISDCHIGSE----ANCAV-CTEIFETETEAREMPCKH 226

Query: 200 VYHKSCILKWLEISNSCPLCRAAL 223
           ++H  CI+ WL I NSCP+CR  L
Sbjct: 227 LFHDDCIVPWLSIRNSCPVCRFEL 243

[Close]

BLAST of Chy5G095940 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 5.4e-10
Identity = 33/78 (42.31%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 142 EEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDCSVCCEEIKRKGEEVRRIPCGHVYH 201
           EEG PP  AS+++I+ +   + DG  GE       C +C EE K + E V+ +PC H +H
Sbjct: 87  EEGRPP--ASKASIDAMPIVEIDGCEGE-------CVICLEEWKSE-ETVKEMPCKHRFH 146

Query: 202 KSCILKWLEISNSCPLCR 220
             CI KWL    SCP+CR
Sbjct: 147 GGCIEKWLGFHGSCPVCR 154

The following BLAST results are available for this feature:

BLAST of Chy5G095940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CH30	2.1e-11	32.85	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q5R476	6.2e-11	40.70	E3 ubiquitin-protein ligase Arkadia OS=Pongo abelii OX=9601 GN=RNF111 PE=2 SV=1	[more]
Q8LPN7	1.4e-10	41.77	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9SNB6	9.0e-10	40.96	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q6ZSG1	9.0e-10	26.29	E3 ubiquitin-protein ligase RNF165 OS=Homo sapiens OX=9606 GN=RNF165 PE=1 SV=1	[more]

BLAST of Chy5G095940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHS2	1.2e-121	96.43	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 P...	[more]
A0A5D3CSM6	5.7e-108	87.95	RING finger protein 165-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C5T8	5.7e-108	87.95	RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103497006 PE=4 SV=1	[more]
A0A5A7TNB0	2.8e-54	54.51	RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3CVT7	2.3e-45	58.29	RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Chy5G095940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139003.1	4.28e-158	96.43	E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN61460.1 hypothetical pro...	[more]
XP_008457277.1	4.17e-140	87.95	PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0033274.1 RING finger...	[more]
XP_038876917.1	1.48e-91	61.11	E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ub...	[more]
KAA0043526.1	7.08e-69	54.51	RING finger protein 165-like protein [Cucumis melo var. makuwa]	[more]
XP_008442291.1	7.69e-59	58.29	PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0041218.1 RING finger...	[more]

BLAST of Chy5G095940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19950.1	9.8e-12	41.77	RING/U-box superfamily protein	[more]
AT3G46620.1	6.4e-11	40.96	zinc finger (C3HC4-type RING finger) family protein	[more]
AT5G37200.1	8.3e-11	41.89	RING/U-box superfamily protein	[more]
AT5G59550.1	2.4e-10	42.86	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G26800.1	5.4e-10	42.31	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 177..218 e-value: 5.7E-8 score: 42.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 176..219 e-value: 1.0E-12 score: 48.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 177..219 score: 13.226928
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 141..224 e-value: 5.1E-21 score: 76.1
None	No IPR available	PANTHER	PTHR45931:SF9	E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKE	coord: 68..223
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 68..223
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 168..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G095940.1	Chy5G095940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity