Chy5G094640 (gene) Cucumber (hystrix) v1

Overview
NameChy5G094640
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH05: 4473450 .. 4474058 (-)
RNA-Seq ExpressionChy5G094640
SyntenyChy5G094640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATGGCTGAAGATCGGACCATGGCCCATTTTTAGTCTATGACAATGAAATCGGACCCTTATGCCCTAAATTTTCAGAGTATTGATGGAATAAGCTCACCTAACAACGGTAAGTTTTTGCTTCCTGTTATGAAATCCATTACTTGTTTGTCTCCCTCTATGAGTTAAAGTATTTATAAGCAAAAGAAGCGAAAAGCAAAGAATCTCAGAGAAGCAATTGAAAATATGGGGTCCTTGTCGATGCAGAAGGGAGCAAGCTTATCTGGAAATGCATTGAATAATGCGAATTAACGCCACTGGCAGTTGCACATGTTGCTTCTGCAATCCACTCTCTCGTCGAGCGTGAAATTGTTACATCATTAAACAGAGCTTCTTCAGCGAGGGAAAAAAAACTGGGTGGGAGGTACGTTTTTTGTAATCTTAATTATGTGTCCGATGCTGTTCCTTACTCATATTTGTGGCTATTGCTTATTTATCTCTGCATCGTACTCAATCATTGTCCCATTTTTGATGGAGCTTTTTCTTTCCATATGATAATTTTGTCAATGTTAGTCAATATGAATGCTTTGTTGTCAGTAAATGAGATCTGCCTGTAGGTTTAGGTGA

mRNA sequence

ATGGGTATGGCTGAAGATCGGACCATGGCCCATTTTTAGTCTATGACAATGAAATCGGACCCTTATGCCCTAAATTTTCAGAGTATTGATGGAATAAGCTCACCTAACAACGTTGCACATGTTGCTTCTGCAATCCACTCTCTCGTCGAGCGTGAAATTGTTACATCATTAAACAGAGCTTCTTCAGCGAGGGAAAAAAAACTGGGTGGGAGGTTTAGGTGA

Coding sequence (CDS)

ATGGGTATGGCTGAAGATCGGACCATGGCCCATTTTTAGTCTATGACAATGAAATCGGACCCTTATGCCCTAAATTTTCAGAGTATTGATGGAATAAGCTCACCTAACAACGTTGCACATGTTGCTTCTGCAATCCACTCTCTCGTCGAGCGTGAAATTGTTACATCATTAAACAGAGCTTCTTCAGCGAGGGAAAAAAAACTGGGTGGGAGGTTTAGGTGA

Protein sequence

MGMAEDRTMAHF*SMTMKSDPYALNFQSIDGISSPNNVAHVASAIHSLVEREIVTSLNRASSAREKKLGGRFR*
Homology
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BLAST of Chy5G094640 vs. NCBI nr
Match: KAE8651841.1 (hypothetical protein Csa_006264 [Cucumis sativus])

HSP 1 Score: 136 bits (343), Expect = 3.26e-40
Identity = 71/73 (97.26%), Postives = 71/73 (97.26%), Query Frame = 0 

Query: 1  MGMAEDRTMAHF*SMTMKSDPYALNFQSIDGISSPNNVAHVASAIHSLVEREIVTSLNRA 60
          MGMAEDRTMA F SMTMKSDPYALNFQSIDGISSPNNVAHVASAIHSLVEREIVTSLNRA
Sbjct: 1  MGMAEDRTMARFYSMTMKSDPYALNFQSIDGISSPNNVAHVASAIHSLVEREIVTSLNRA 60

Query: 61 SSAREKKLGGRFR 73
          SSAREKKLGGRFR
Sbjct: 61 SSAREKKLGGRFR 73

The following BLAST results are available for this feature:
BLAST of Chy5G094640 vs.
Match NameE-valueIdentityDescription
BLAST of Chy5G094640 vs.
Match NameE-valueIdentityDescription
BLAST of Chy5G094640 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8651841.13.26e-4097.26hypothetical protein Csa_006264 [Cucumis sativus][more]
BLAST of Chy5G094640 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy5G094640.1Chy5G094640.1mRNA