Chy5G094620 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G094620
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	beta-carotene isomerase D27, chloroplastic
Location	chrH05: 4462772 .. 4466978 (+)
RNA-Seq Expression	Chy5G094620
Synteny	Chy5G094620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTAAGAGTTATTCAAGATACGAGAGTCATTTTGCCAACAATGATGAACAACAACAAAATGAAGTTGAGAAGAAAAAGCATTCTTTGTTTTGGAGTGCTCACAAGACCAGCAGAGGGTGAAGTAATAGAAGAAACAAGAAAAACCAATACTGTTTATACAGATAATTGGTTTGATAAAATTGCCATAGACCATTTGTCTCAGGCAGTACAAGCAACATCAGGTTTGTTTTCTTTCTTTCTTTTTTTCTTGGAAAGATTTGGAAAAGATGGGGAAAAAGAAGATTGATATTAGAGTCATGATATGCAGGTTGGAGAAGCAAAAAGAGTGGATATGAAAGCTTGGTGGAAGTGACAACAATGGCATCAAGAAATTTTAACCACATCAAACAAAAAGAGGTTGTCATTCAAGCCCTTGGAATGGCATTTCCAAAGCCAATCCTCTCTTTGGTAAACTTCATTCATTGTCATTTAATATTCCCAGTATGTTTCATTCATTACCATTTAATAACGTTTACTATTGTTTTAGCTTTCTAGCCTTCCCCTCTTTCATGATCTATGTATTATATTATGCATACCATACCATGCATACATGTAAAATACCTATCATCAAACATACCATTAAATATGCCAAGTGTGGTTACCTCAATTAACACGAATATGTGCCGATAACCAAGAGAATTGTAATTCGAATTCTCATCTCCATTGCACTAAAACAAAAACAAAAACATATCACGAAAAATTATGAAGAGTCATTTCAAACTTGCATTAACTTTTACTTTGACCAATTGTGCAAATAATATCATTATCTCAAGAGTTATTGTCATTTAAGAATCACATTTATATATGTTTAGTGTAAGTGATTGTGGGGATGGAGATCAAAAAGCTAACTTCTCTTCATGTTAATTAACTGAGCTAAACTCACTCTATTACCTTAAATTATTTATTTACCTATTGTATTTGTGAATTATTAAATAATTGATTTAAGGTAAGTAATGCATGATCATTTCATCCTTGATGAATTTTGTTTGAACCAAAATGTTGTCTCCCTTTGTTTGGTCTCTCTTCTCCCATCAACACTTGGGAGAATATAGCTAGGATCATTGCCTAGGTTAGAACCTACTGAAAAACTATACCCTTCTCTAATTTTTCTTTCAAGTAATCATTGGGTTTATTAATTATTTGATTGTCACGTCATTATCTGGAAACAGTATCATCAAATGGTCACATTTTTTTATGTTAGTTTATTATAAATAAGTACTAAAATTTTGCTTTTACTATTATTAATTCATCTCCATATTTTCATTTTACTATTATACCCTCACTCCTCCCAACTATATTGCCCTTGACACATAGTGGTGAACAAAGTGCAGATAAAAGCATTGCTACCACAATCCAAATTCGCAAGGGAATATTTTGCTGCATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTAAGATGTTGTAAATTTACCTAAAGGCCTCTTTATTTCCTCAGTGTATGTTCATAGAAATCCAAGGACCTAATTGGACATTCACTTGCATGCATACACAAATACACACAAGAGAGGCTAATCTGAGCATAACCCAAATATTAAGGACAGGCATATATGTCATTAATTAAGAGGTTAAAAATTTGAATTCCCCACCTCACTGATTGAATAAGGGAGAGACATATTTATAATTAACATTTTCTTTCTTTTGGATTGGAAAGTTAGAAGTTAACTTGTACATAGCTCAACTGTTAGGACAAACATCATCAATCAAGAGAACAAAAGTTTAAATCCTACTGTTACAACAAGTATCATCGATCAAGATATTAAAAGCTTAAATCCTCTACCCATGTGTTGAATTTAGCTGGTCCTCTGTGAATTTAGCTGGTCCTCTATCTTTTGTATTGGAAAACTAAATAAGTGCTCAAGGCCACCATTTAAGACCGATGTCAAAGAATTTGCTGAGAATAGATAGTATTTAAACGGAGGATATTGAACAACCAAGATCAGAATTAGAAGAGATTCACAAGGTTGAAAAGACTGACATATGAGGAGGCATACTGGTGGACATCAAGAACTTCACCTTTAGCACTATATTGAATATAATAATACGATTTTCAATGGCCAAGTTGATAAACCTGCAGTGTTTGAGGCACTAGTCCCTTCTAGACTTGTCCTGTCCCTACAAATCAAAGAAAGGTTTTTTGTGACGTAATATATATGAACCAATTCTTTGAAAAAACTATATTCTCTTCATGCTTAATCACTTTGACCCTTTCCCTTTCTAGACATTCCTTAAAATTTAGATTAAACACAGCTGATATGCCTAGATTGTTATGGAGGGAGGGATTGAAAAAGAACACACATGGAATGAAAAAGTTTTTTTTTTCCGATCGACTAATTCGTAAGACTGACAATGGTAACAAATGATTCTTACAGGTGAAGGAATCAGAATTCAAAGGGAAAAGAGAAAAGAACGTGGTTCAAATCCATAAGTGCAGGTAATTCCTTCTCGCATCAGAGTTATAATTAAGGCAATGCTATCTAACCGTTCATGGGTCCCATTCTCACCTACCTGAGATACTTTCCACACCCAAAGAACCATTTGTCTATAATTACTATGCTTCTTCTAAACCCTTAGTACTTAATCACATTAAATGATATCCATCATTCAAATCATTGAAAATTTGAAATTGTCCTCGTCAAAATTAATATTCAGGAAATCTATTTTGCCCCTAAACATATTCCATTTATTTGCAGGTTCCTAGAGCAAACTAATTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCATGTCAGGATTTCATCAAGGATTCCTTGGGAATGCCAGTCACCATGGTCCCCAGTAAGTCTCCTCACTAACCTACCGATTCACCAACCAATTGCAGCAACCATATATTGTTTTCCCAAAAGAAAAACAAATTTCAACTTTTCAAAGTAATAATGATAATGATAAATTAAAAAAAAAAGGATCAAATTCACACACTGCCGCACAAGACAATTCTAGACACTAATTCAGGCTTCCAAACGATAAATGGAGACCATAATTCTTATTTCTCACAACTCTACAATATTTAGTTGTCAAAAAAAATTATAGAAAATTAAATCATAGCTGGCCACCTGGCTTGGGCTCATTTCTTCAATGCATTTTATATTAATTAGATTGGCTCTTCATTGACCATTAAGCCCACCTATGGTGGTTACCTCAAGGCAATTATAATATAAAAACTTCATATTCACATATAGGGAATATTAGAAGTAAATTATTTCAGCTGAATCTATATAGTCTAGATGTGCGGACACTAAATAAAGTAAATCAGCATAGTATAATGACCAATGACTGGTAGATCCATGAGCAAAAGTGAAATTACTATTAAAGCAACATTACCAGCACCAAATGGTGGAACGGATCATGTTTGTCAATGTGAATGGAGGGTCCCATGTACGAACCATTTTGGGTACAAAAGAACTGCAGGTAGGCCCCAACCAAGCTAAGTGGGATTCCAAACCTGCAGCTTAATTTTGCGATATGGTTACAATCCAAGAATTAAAAGCTGAATTTCCATCGTTAATCAATCATCAAGCTGAATTTCACACTGAGCCAATCATCGATCTTGTCCATGATATACATTAATCATCACAAGTGTAAAAAATGCAACCAAGAAGAGGCCTTAGTATTAGGATGTTGATTATGCACCATGATGTAACGACTAGCTGGGAACCATTAGTATTCATGTCTAGGACCAAGAAATGAATCAATATGCAAGGGGAATTTGGGAGCAAAAAAGAGGGGAGCAGGGGGGAAGAAGCTTTAACGTGATTCCAATAACTGTCTTTTTCTTTGCAGATTTTGATGACATGAGCTGTGAGATGATCTTTGGAAAGGAACCGCCAGCTTCAATCGATGATCCAGCGCTTAAGCAACCATGTTACCAACTATGTATTTACCTAAACACAAGTCTTCTTCTTCCTTTTCTTATTATTACCTTTTACTTATTTACATGTAAGTGGAGAAGTCAAATATATTAAATAACTTAATGGGCTAGGGAGCAGGAATACAGAAGCCCTAAACGATACTTTTAGGGGAATGGTAATGAGTTAAAAATGATTCTAATCTTCTTTGTTTACCTTTTGCAGGCAAAACGAAAGAGAAACATACAACAAACTGCTTTATTTAA

mRNA sequence

ATGGATTTAAGAGTTATTCAAGATACGAGAGTCATTTTGCCAACAATGATGAACAACAACAAAATGAAGTTGAGAAGAAAAAGCATTCTTTGTTTTGGAGTGCTCACAAGACCAGCAGAGGGTGAAGTAATAGAAGAAACAAGAAAAACCAATACTGTTTATACAGATAATTGGTTTGATAAAATTGCCATAGACCATTTGTCTCAGGCAGTACAAGCAACATCAGGTTGGAGAAGCAAAAAGAGTGGATATGAAAGCTTGGTGGAAGTGACAACAATGGCATCAAGAAATTTTAACCACATCAAACAAAAAGAGGTTGTCATTCAAGCCCTTGGAATGGCATTTCCAAAGCCAATCCTCTCTTTGATAAAAGCATTGCTACCACAATCCAAATTCGCAAGGGAATATTTTGCTGCATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTGAAGGAATCAGAATTCAAAGGGAAAAGAGAAAAGAACGTGGTTCAAATCCATAAGTGCAGGTTCCTAGAGCAAACTAATTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCATGTCAGGATTTCATCAAGGATTCCTTGGGAATGCCAGTCACCATGGTCCCCAATTTTGATGACATGAGCTGTGAGATGATCTTTGGAAAGGAACCGCCAGCTTCAATCGATGATCCAGCGCTTAAGCAACCATGTTACCAACTATGCAAAACGAAAGAGAAACATACAACAAACTGCTTTATTTAA

Coding sequence (CDS)

ATGGATTTAAGAGTTATTCAAGATACGAGAGTCATTTTGCCAACAATGATGAACAACAACAAAATGAAGTTGAGAAGAAAAAGCATTCTTTGTTTTGGAGTGCTCACAAGACCAGCAGAGGGTGAAGTAATAGAAGAAACAAGAAAAACCAATACTGTTTATACAGATAATTGGTTTGATAAAATTGCCATAGACCATTTGTCTCAGGCAGTACAAGCAACATCAGGTTGGAGAAGCAAAAAGAGTGGATATGAAAGCTTGGTGGAAGTGACAACAATGGCATCAAGAAATTTTAACCACATCAAACAAAAAGAGGTTGTCATTCAAGCCCTTGGAATGGCATTTCCAAAGCCAATCCTCTCTTTGATAAAAGCATTGCTACCACAATCCAAATTCGCAAGGGAATATTTTGCTGCATTCACCACTGTCTTCTTTGCTTGGTTAGTTGGACCCTGCGAGGTGAAGGAATCAGAATTCAAAGGGAAAAGAGAAAAGAACGTGGTTCAAATCCATAAGTGCAGGTTCCTAGAGCAAACTAATTGTGCTGGAATGTGCATTAATCTATGCAAGTTTCCATGTCAGGATTTCATCAAGGATTCCTTGGGAATGCCAGTCACCATGGTCCCCAATTTTGATGACATGAGCTGTGAGATGATCTTTGGAAAGGAACCGCCAGCTTCAATCGATGATCCAGCGCTTAAGCAACCATGTTACCAACTATGCAAAACGAAAGAGAAACATACAACAAACTGCTTTATTTAA

Protein sequence

MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGEVIEETRKTNTVYTDNWFDKIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQLCKTKEKHTTNCFI*

Homology

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BLAST of Chy5G094620 vs. ExPASy Swiss-Prot
Match: R4HZ96 (Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27 PE=1 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 3.8e-89
Identity = 153/251 (60.96%), Postives = 192/251 (76.49%), Query Frame = 0


Query: 1   MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGEVIEETRKTNTVYTDNWFD 60
           MD ++I     + PT+    K++L+ K     GVL RP + ++ EET +   VY DNWFD
Sbjct: 1   MDSKMIAHNMSLTPTLAQWKKLRLKPKHTFVVGVLARPTD-DISEETLRKTNVYKDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL 120
           K+AI+HLS++VQA +G  + KSG++SLVE  T+AS+ FN  +Q+ +++ AL  AFPKPIL
Sbjct: 61  KLAINHLSKSVQAATGISNNKSGFDSLVEAATVASQKFNTTQQQGIILDALDRAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           S+I+ ++P SK AREYFA FTT+FFAWL+GP EV+ESE  G+REKN+V I KCRFLE+TN
Sbjct: 121 SVIRRVMPPSKLAREYFAVFTTIFFAWLLGPSEVRESEINGRREKNIVHIKKCRFLEETN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQL 240
           C GMCINLCK P Q FIKDS GMPV MVPNFDDMSCEMIFG+EPPAS DDPALKQPCY+L
Sbjct: 181 CVGMCINLCKMPSQLFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNC 252
           CK K+ H T C
Sbjct: 241 CKAKKNHATQC 250

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BLAST of Chy5G094620 vs. ExPASy Swiss-Prot
Match: C7AU21 (Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=D27 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-70
Identity = 134/249 (53.82%), Postives = 166/249 (66.67%), Query Frame = 0


Query: 24  LRRKSILCFGVLTRPAEGEVIEETRKTN------------------TVYTDNWFDKIAID 83
           +RR       V+ RP E       +KT                   TVY D+WFDK+AI 
Sbjct: 32  MRRCCSTVRAVMARPQEAPASAPAKKTETAAMMSTVQTETAAAPPATVYRDSWFDKLAIG 91

Query: 84  HLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPILSLIKA 143
           +LS+ +Q  SG +++K GYESL++     SR F+  KQ E+V QAL  A P  IL++IK 
Sbjct: 92  YLSRNLQEASGLKNEKDGYESLIDAALAISRIFSLDKQSEIVTQALERALPSYILTMIKV 151

Query: 144 LLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTNCAGMC 203
           ++P S+F+REYFAAFTT+FF WLVGPCEV ESE +G++EKNVV I KCRFLE TNC GMC
Sbjct: 152 MMPPSRFSREYFAAFTTIFFPWLVGPCEVMESEVEGRKEKNVVYIPKCRFLESTNCVGMC 211

Query: 204 INLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQL-CKTK 254
            NLCK PCQ FI+DSLGM V M PNF+DMSCEMIFG++PP   DDPALKQPC++  C  K
Sbjct: 212 TNLCKIPCQKFIQDSLGMKVYMSPNFEDMSCEMIFGQQPPE--DDPALKQPCFRTKCVAK 271

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BLAST of Chy5G094620 vs. ExPASy Swiss-Prot
Match: Q7XA78 (Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D27 PE=1 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.5e-58
Identity = 117/244 (47.95%), Postives = 159/244 (65.16%), Query Frame = 0


Query: 15  TMMNNNKMKLRRKS----ILC-----FGVLTRPAEGEVIEETRKTNTVYTDNWFDKIAID 74
           T  N+ +  L R+S     LC      G L    E   IE +   N    D++F KIAI+
Sbjct: 17  TWFNDTRSGLDRRSSISPTLCSKPVYSGKLKAAKETARIETSNTKNASIEDSFFSKIAIN 76

Query: 75  HLSQAVQATSG--WRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPILSLI 134
           +LS+ +Q  +G    SK + Y+ LV+  T  SRNF+  +Q E V+ +L  A P  I SLI
Sbjct: 77  YLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQHEFVLSSLDRALPTVISSLI 136

Query: 135 KALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTNCAG 194
           K   P SK +RE FA FTT+ FAWLVGP EV+E+E  G++EK+VV I KCRFLEQ+NC G
Sbjct: 137 KMAFPPSKVSRELFALFTTISFAWLVGPSEVRETEVNGRKEKSVVYIEKCRFLEQSNCVG 196

Query: 195 MCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQLCKT 248
           MC ++CK P Q FIK+SLGMP+ M P+F+D+SC+M+FG+EPP   DDPA+KQPC++ CK+
Sbjct: 197 MCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPEIEDDPAMKQPCFEFCKS 256

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BLAST of Chy5G094620 vs. ExPASy TrEMBL
Match: A0A0A0LIR1 (DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G226860 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 3.6e-143
Identity = 250/253 (98.81%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGEVIEETRKTNTVYTDNWFD 60
           MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGE+IEETRKTNTVYTDNWFD
Sbjct: 1   MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGELIEETRKTNTVYTDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL 120
           KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL
Sbjct: 61  KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           SLIKALLPQSK AREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN
Sbjct: 121 SLIKALLPQSKLAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQL 240
           CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY+L
Sbjct: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNCFI 254
           CKTKEKHTTNCFI
Sbjct: 241 CKTKEKHTTNCFI 253

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BLAST of Chy5G094620 vs. ExPASy TrEMBL
Match: A0A5D3E3G1 (Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00920 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.1e-139
Identity = 245/253 (96.84%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGEVIEETRKTNTVYTDNWFD 60
           MDLRVIQDT VILPTMMNNNKMKLRRK+ILC GVLTR AEGEVIEETRKT TVYTDNWFD
Sbjct: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL 120
           KIAIDHLSQAVQATSGWRSKKSGYESL+EVTTMASRNFNHIKQKEVVIQALG AFPKPIL
Sbjct: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN
Sbjct: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQL 240
           CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY+L
Sbjct: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNCFI 254
           CKTKEKHTTNCFI
Sbjct: 241 CKTKEKHTTNCFI 253

[Close]

BLAST of Chy5G094620 vs. ExPASy TrEMBL
Match: A0A1S3BL84 (LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491262 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.3e-137
Identity = 242/253 (95.65%), Postives = 245/253 (96.84%), Query Frame = 0


Query: 1   MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGEVIEETRKTNTVYTDNWFD 60
           MDLRVIQDT VILPTMMNNNKMKLRRK+    GVLTR AEGEVIEETRKT TVYTDNWFD
Sbjct: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKTFFXVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL 120
           KIAIDHLSQAVQATSGWRSKKSGYESL+EVTTMASRNFNHIKQKEVVIQALG AFPKPIL
Sbjct: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN
Sbjct: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQL 240
           CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY+L
Sbjct: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNCFI 254
           CKTKEKHTTNCFI
Sbjct: 241 CKTKEKHTTNCFI 253

[Close]

BLAST of Chy5G094620 vs. ExPASy TrEMBL
Match: A0A6J1HUP9 (beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111466998 PE=4 SV=1)

HSP 1 Score: 438.3 bits (1126), Expect = 2.1e-119
Identity = 211/257 (82.10%), Postives = 230/257 (89.49%), Query Frame = 0


Query: 1   MDLRVIQDTRVILPTMMN----NNKMKLRRKSILCFGVLTRPAEGEVIEETRKTNTVYTD 60
           M++RV ++ RVIL +  N    N   K+RRKSI C  VLTR AE    EETRK NTVYTD
Sbjct: 1   MEVRVGEERRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTD 60

Query: 61  NWFDKIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFP 120
           NWF+KIAI H+SQAVQATSGWRSKKSGYESLVEV TMASRN+N IKQ+EV+IQALG AFP
Sbjct: 61  NWFEKIAIHHVSQAVQATSGWRSKKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFP 120

Query: 121 KPILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFL 180
            PILSLI+ LLPQSKFAREYFAAFTTVFFAWLVGPCEVKES+FKGK+EKNVVQIHKCRFL
Sbjct: 121 APILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKKEKNVVQIHKCRFL 180

Query: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQP 240
           EQTNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA++DDPALKQP
Sbjct: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQP 240

Query: 241 CYQLCKTKEKHTTNCFI 254
           CY+LCKTKEKHTTNCFI
Sbjct: 241 CYKLCKTKEKHTTNCFI 257

[Close]

BLAST of Chy5G094620 vs. ExPASy TrEMBL
Match: A0A6J1HHC5 (beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111464069 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.4e-118
Identity = 211/257 (82.10%), Postives = 228/257 (88.72%), Query Frame = 0


Query: 1   MDLRVIQDTRVILPTMMN----NNKMKLRRKSILCFGVLTRPAEGEVIEETRKTNTVYTD 60
           M++RV +  RVIL +  N    N   K+RRKSI C  VLTR AE    EETRK NTVYTD
Sbjct: 1   MEVRVGEVRRVILGSGTNVRRSNKTKKMRRKSIACVAVLTRAAESGATEETRKPNTVYTD 60

Query: 61  NWFDKIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFP 120
           NWF+KIAI H+SQAVQATSGWRS KSGYESLVEV TMASRN+N IKQ+EV+IQALG AFP
Sbjct: 61  NWFEKIAIHHVSQAVQATSGWRSNKSGYESLVEVATMASRNYNQIKQREVIIQALGRAFP 120

Query: 121 KPILSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFL 180
            PILSLI+ LLPQSKFAREYFAAFTTVFFAWLVGPCEVKES+FKGKREKNVVQIHKCRFL
Sbjct: 121 APILSLIRTLLPQSKFAREYFAAFTTVFFAWLVGPCEVKESDFKGKREKNVVQIHKCRFL 180

Query: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQP 240
           EQTNCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA++DDPALKQP
Sbjct: 181 EQTNCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAAVDDPALKQP 240

Query: 241 CYQLCKTKEKHTTNCFI 254
           CY+LCKTKEKHTTNCFI
Sbjct: 241 CYKLCKTKEKHTTNCFI 257

[Close]

BLAST of Chy5G094620 vs. NCBI nr
Match: XP_004145371.1 (beta-carotene isomerase D27, chloroplastic [Cucumis sativus] >KGN61698.1 hypothetical protein Csa_006159 [Cucumis sativus])

HSP 1 Score: 515 bits (1327), Expect = 2.05e-184
Identity = 250/253 (98.81%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGEVIEETRKTNTVYTDNWFD 60
           MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGE+IEETRKTNTVYTDNWFD
Sbjct: 1   MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGELIEETRKTNTVYTDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL 120
           KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL
Sbjct: 61  KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           SLIKALLPQSK AREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN
Sbjct: 121 SLIKALLPQSKLAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQL 240
           CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY+L
Sbjct: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNCFI 253
           CKTKEKHTTNCFI
Sbjct: 241 CKTKEKHTTNCFI 253

[Close]

BLAST of Chy5G094620 vs. NCBI nr
Match: KAA0057411.1 (beta-carotene isomerase D27 [Cucumis melo var. makuwa] >TYK30110.1 beta-carotene isomerase D27 [Cucumis melo var. makuwa])

HSP 1 Score: 504 bits (1297), Expect = 7.67e-180
Identity = 245/253 (96.84%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGEVIEETRKTNTVYTDNWFD 60
           MDLRVIQDT VILPTMMNNNKMKLRRK+ILC GVLTR AEGEVIEETRKT TVYTDNWFD
Sbjct: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKNILCVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL 120
           KIAIDHLSQAVQATSGWRSKKSGYESL+EVTTMASRNFNHIKQKEVVIQALG AFPKPIL
Sbjct: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN
Sbjct: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQL 240
           CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY+L
Sbjct: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNCFI 253
           CKTKEKHTTNCFI
Sbjct: 241 CKTKEKHTTNCFI 253

[Close]

BLAST of Chy5G094620 vs. NCBI nr
Match: XP_008449360.1 (PREDICTED: LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic [Cucumis melo])

HSP 1 Score: 497 bits (1279), Expect = 4.26e-177
Identity = 242/253 (95.65%), Postives = 245/253 (96.84%), Query Frame = 0


Query: 1   MDLRVIQDTRVILPTMMNNNKMKLRRKSILCFGVLTRPAEGEVIEETRKTNTVYTDNWFD 60
           MDLRVIQDT VILPTMMNNNKMKLRRK+    GVLTR AEGEVIEETRKT TVYTDNWFD
Sbjct: 1   MDLRVIQDTTVILPTMMNNNKMKLRRKTFFXVGVLTRSAEGEVIEETRKTKTVYTDNWFD 60

Query: 61  KIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPIL 120
           KIAIDHLSQAVQATSGWRSKKSGYESL+EVTTMASRNFNHIKQKEVVIQALG AFPKPIL
Sbjct: 61  KIAIDHLSQAVQATSGWRSKKSGYESLLEVTTMASRNFNHIKQKEVVIQALGRAFPKPIL 120

Query: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180
           SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN
Sbjct: 121 SLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTN 180

Query: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQL 240
           CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY+L
Sbjct: 181 CAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYKL 240

Query: 241 CKTKEKHTTNCFI 253
           CKTKEKHTTNCFI
Sbjct: 241 CKTKEKHTTNCFI 253

[Close]

BLAST of Chy5G094620 vs. NCBI nr
Match: XP_038888067.1 (beta-carotene isomerase D27, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 474 bits (1221), Expect = 3.07e-168
Identity = 232/254 (91.34%), Postives = 241/254 (94.88%), Query Frame = 0


Query: 1   MDLRVIQDTRVILPTMMNNNKMK-LRRKSILCFGVLTRPAEGEVIEETRKTNTVYTDNWF 60
           MDLRVIQ+ RVILPTMMNNNKMK L RKS+ C  VLTRPAE  VIEETRKTNTVYTDNWF
Sbjct: 1   MDLRVIQERRVILPTMMNNNKMKKLGRKSLPCVAVLTRPAESGVIEETRKTNTVYTDNWF 60

Query: 61  DKIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPI 120
           DKIAI HLSQAVQATSGWRSKKSGYESLVEVTTMASRNFN IKQ+EVVIQALG AFPKPI
Sbjct: 61  DKIAIHHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNQIKQREVVIQALGRAFPKPI 120

Query: 121 LSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQT 180
           LSLIKAL+PQSKFAREYFA FTTVFFAWLVGPCEVKESEF+GKREKNVVQIHKCRFLEQT
Sbjct: 121 LSLIKALVPQSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKREKNVVQIHKCRFLEQT 180

Query: 181 NCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQ 240
           NCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA IDDPALKQPCY+
Sbjct: 181 NCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCYK 240

Query: 241 LCKTKEKHTTNCFI 253
           LCK+KEKHTTNCFI
Sbjct: 241 LCKSKEKHTTNCFI 254

[Close]

BLAST of Chy5G094620 vs. NCBI nr
Match: XP_038888066.1 (beta-carotene isomerase D27, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 450 bits (1157), Expect = 4.00e-158
Identity = 221/242 (91.32%), Postives = 229/242 (94.63%), Query Frame = 0


Query: 1   MDLRVIQDTRVILPTMMNNNKMK-LRRKSILCFGVLTRPAEGEVIEETRKTNTVYTDNWF 60
           MDLRVIQ+ RVILPTMMNNNKMK L RKS+ C  VLTRPAE  VIEETRKTNTVYTDNWF
Sbjct: 1   MDLRVIQERRVILPTMMNNNKMKKLGRKSLPCVAVLTRPAESGVIEETRKTNTVYTDNWF 60

Query: 61  DKIAIDHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPI 120
           DKIAI HLSQAVQATSGWRSKKSGYESLVEVTTMASRNFN IKQ+EVVIQALG AFPKPI
Sbjct: 61  DKIAIHHLSQAVQATSGWRSKKSGYESLVEVTTMASRNFNQIKQREVVIQALGRAFPKPI 120

Query: 121 LSLIKALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQT 180
           LSLIKAL+PQSKFAREYFA FTTVFFAWLVGPCEVKESEF+GKREKNVVQIHKCRFLEQT
Sbjct: 121 LSLIKALVPQSKFAREYFAVFTTVFFAWLVGPCEVKESEFEGKREKNVVQIHKCRFLEQT 180

Query: 181 NCAGMCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQ 240
           NCAGMCINLCKFPCQDFIKDSLGMPV+MVPNFDDMSCEMIFGK+PPA IDDPALKQPCY+
Sbjct: 181 NCAGMCINLCKFPCQDFIKDSLGMPVSMVPNFDDMSCEMIFGKDPPAPIDDPALKQPCYK 240

[Close]

BLAST of Chy5G094620 vs. TAIR 10
Match: AT1G03055.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 143 Blast hits to 143 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 226.1 bits (575), Expect = 3.2e-59
Identity = 117/244 (47.95%), Postives = 159/244 (65.16%), Query Frame = 0


Query: 15  TMMNNNKMKLRRKS----ILC-----FGVLTRPAEGEVIEETRKTNTVYTDNWFDKIAID 74
           T  N+ +  L R+S     LC      G L    E   IE +   N    D++F KIAI+
Sbjct: 17  TWFNDTRSGLDRRSSISPTLCSKPVYSGKLKAAKETARIETSNTKNASIEDSFFSKIAIN 76

Query: 75  HLSQAVQATSG--WRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPILSLI 134
           +LS+ +Q  +G    SK + Y+ LV+  T  SRNF+  +Q E V+ +L  A P  I SLI
Sbjct: 77  YLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQHEFVLSSLDRALPTVISSLI 136

Query: 135 KALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTNCAG 194
           K   P SK +RE FA FTT+ FAWLVGP EV+E+E  G++EK+VV I KCRFLEQ+NC G
Sbjct: 137 KMAFPPSKVSRELFALFTTISFAWLVGPSEVRETEVNGRKEKSVVYIEKCRFLEQSNCVG 196

Query: 195 MCINLCKFPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQLCKT 248
           MC ++CK P Q FIK+SLGMP+ M P+F+D+SC+M+FG+EPP   DDPA+KQPC++ CK+
Sbjct: 197 MCTHICKIPSQIFIKNSLGMPIYMEPDFNDLSCKMMFGREPPEIEDDPAMKQPCFEFCKS 256

[Close]

BLAST of Chy5G094620 vs. TAIR 10
Match: AT1G64680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). )

HSP 1 Score: 156.0 bits (393), Expect = 4.1e-38
Identity = 73/169 (43.20%), Postives = 104/169 (61.54%), Query Frame = 0


Query: 84  YESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPILSLIKALLPQSKFAREYFAAFTTV 143
           YES VEV+    +  + ++Q+E V + L    P       + L P +K+A E+ AA T  
Sbjct: 77  YESFVEVSKRVMQGRSRVQQQEAVREVLLSMLPPGAPEQFRKLFPPTKWAAEFNAALTVP 136

Query: 144 FFAWLVGPCEVKESEFKGKREKNVVQIHKCRFLEQTNCAGMCINLCKFPCQDFIKDSLGM 203
           FF WLVGP +V E E  G ++++ V+I KCR+LE + C GMC+N+CK P QDF  +  G+
Sbjct: 137 FFHWLVGPSQVIEVEVNGVKQRSGVRIKKCRYLENSGCVGMCVNMCKIPTQDFFTNEFGL 196

Query: 204 PVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCY-QLCKTKEKHTTNC 252
           P+TM PN++DMSCEMI+G+ PPA  +D A KQPC   +C      +  C
Sbjct: 197 PLTMNPNYEDMSCEMIYGQAPPAFEEDVATKQPCLADICSMSNPSSPIC 245

[Close]

BLAST of Chy5G094620 vs. TAIR 10
Match: AT1G03055.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 120.6 bits (301), Expect = 1.9e-27
Identity = 74/171 (43.27%), Postives = 99/171 (57.89%), Query Frame = 0


Query: 15  TMMNNNKMKLRRKS----ILC-----FGVLTRPAEGEVIEETRKTNTVYTDNWFDKIAID 74
           T  N+ +  L R+S     LC      G L    E   IE +   N    D++F KIAI+
Sbjct: 17  TWFNDTRSGLDRRSSISPTLCSKPVYSGKLKAAKETARIETSNTKNASIEDSFFSKIAIN 76

Query: 75  HLSQAVQATSG--WRSKKSGYESLVEVTTMASRNFNHIKQKEVVIQALGMAFPKPILSLI 134
           +LS+ +Q  +G    SK + Y+ LV+  T  SRNF+  +Q E V+ +L  A P  I SLI
Sbjct: 77  YLSKNLQDAAGISSSSKSTDYDRLVDTATRVSRNFDTKQQHEFVLSSLDRALPTVISSLI 136

Query: 135 KALLPQSKFAREYFAAFTTVFFAWLVGPCEVKESEFKGKREKNVVQIHKCR 175
           K   P SK +RE FA FTT+ FAWLVGP EV+E+E  G++EK+VV I KCR
Sbjct: 137 KMAFPPSKVSRELFALFTTISFAWLVGPSEVRETEVNGRKEKSVVYIEKCR 187

[Close]

BLAST of Chy5G094620 vs. TAIR 10
Match: AT4G01995.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64680.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 112.1 bits (279), Expect = 6.7e-25
Identity = 62/171 (36.26%), Postives = 91/171 (53.22%), Query Frame = 0


Query: 76  GWRSKKSGYESLVE-VTTMASRNFNHIKQKEVVIQALGMAFPKPILSLIKAL---LPQSK 135
           G  S+K GY  L+E V  +  +     +  +  ++ L   FP  IL L K L   + Q K
Sbjct: 74  GSDSEKPGYVGLIELVKLLLLKGRTRSETSDAAVRILKSLFPPLILELYKLLIAPIAQGK 133

Query: 136 FAREYFAAFTTVFFAWLVGPCEVKESEF-KGKREKNVVQIHKCRFLEQTNCAGMCINLCK 195
            A    A  T +   WL+GP +V   +   G+   + V + KC++LE++ C G+CIN CK
Sbjct: 134 LAALMVARVTVLTCQWLMGPSKVNIIDLPNGESWDSGVFVEKCQYLEESKCVGVCINTCK 193

Query: 196 FPCQDFIKDSLGMPVTMVPNFDDMSCEMIFGKEPPASIDDPALKQPCYQLC 242
            P Q F KD +G+P+ M PNF D SC+  FG  PP   DD  + +PC++ C
Sbjct: 194 LPTQTFFKDYMGVPLVMEPNFKDYSCQFKFGVAPPE--DDGNVNEPCFETC 242

The following BLAST results are available for this feature:

BLAST of Chy5G094620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
R4HZ96	3.8e-89	60.96	Beta-carotene isomerase D27, chloroplastic OS=Medicago truncatula OX=3880 GN=D27...	[more]
C7AU21	1.3e-70	53.82	Beta-carotene isomerase D27, chloroplastic OS=Oryza sativa subsp. japonica OX=39...	[more]
Q7XA78	4.5e-58	47.95	Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=D2...	[more]

BLAST of Chy5G094620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIR1	3.6e-143	98.81	DUF4033 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G226860 PE=...	[more]
A0A5D3E3G1	1.1e-139	96.84	Beta-carotene isomerase D27 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3BL84	1.3e-137	95.65	LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic OS=Cucumis melo ...	[more]
A0A6J1HUP9	2.1e-119	82.10	beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita maxima O...	[more]
A0A6J1HHC5	1.4e-118	82.10	beta-carotene isomerase D27, chloroplastic-like isoform X3 OS=Cucurbita moschata...	[more]

BLAST of Chy5G094620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145371.1	2.05e-184	98.81	beta-carotene isomerase D27, chloroplastic [Cucumis sativus] >KGN61698.1 hypothe...	[more]
KAA0057411.1	7.67e-180	96.84	beta-carotene isomerase D27 [Cucumis melo var. makuwa] >TYK30110.1 beta-carotene...	[more]
XP_008449360.1	4.26e-177	95.65	PREDICTED: LOW QUALITY PROTEIN: beta-carotene isomerase D27, chloroplastic [Cucu...	[more]
XP_038888067.1	3.07e-168	91.34	beta-carotene isomerase D27, chloroplastic isoform X2 [Benincasa hispida]	[more]
XP_038888066.1	4.00e-158	91.32	beta-carotene isomerase D27, chloroplastic isoform X1 [Benincasa hispida]	[more]

BLAST of Chy5G094620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G03055.1	3.2e-59	47.95	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G64680.1	4.1e-38	43.20	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G03055.2	1.9e-27	43.27	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G01995.1	6.7e-25	36.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025114	Beta-carotene isomerase D27-like, C-terminal	PFAM	PF13225	DUF4033	coord: 147..226 e-value: 9.8E-34 score: 115.2
None	No IPR available	PANTHER	PTHR33591:SF1	BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC	coord: 14..249
IPR038938	Beta-carotene isomerase D27-like	PANTHER	PTHR33591	BETA-CAROTENE ISOMERASE D27	coord: 14..249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G094620.1	Chy5G094620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016859	cis-trans isomerase activity
molecular_function	GO:0005506	iron ion binding