Chy5G094190 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G094190
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Guanine nucleotide-binding protein subunit gamma 2-like
Location	chrH05: 4043215 .. 4044921 (-)
RNA-Seq Expression	Chy5G094190
Synteny	Chy5G094190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCAATCGGCTAGTCCAATAACCCAACGGGTTCAGTCTTCTTCTTCTTCTTCTTCGATTGATACCAGAGGAAAGCATCGGATTCAAGCTGAAGTGAAGCGGCTCGAGCAAGAAGCAAGGTTCCTGGAGGTTAGTTTTCTTTTTTAGTTCTTTCTTTTTTCTCTCTTTCGTTTGAGGTTTCTGATCGTGTGTGATTTTGAATGTGTTTTGTTAAATTGTCACTTACCTAATGTTTAGAAGCCCATTTCTGAAAATGGGTGCTCCAGAAAATTTGAATTGAAGGTTGAACTGTAATGTGAATAAGCTCTGTACTTCTTTTTCTAATGTTTCTAGATGGGGAAACTGTATTGAAGTTTTGGTTTTTTTGTTAGTGTTCGTGTTTACTTTGATTCTGTTCCTGATAGTTCTAAGGGGAAACTGTTAAAATTTTGTTGGGTATAGGAGTCCTTGTTTGGTTGGATGTTGATTCCCACTACATAGTTGTTGATTGGATTGGAAATCTTAATTGACTCCTGCTTGCAAAACTTTCTGAATATGATGTTTAGAGATGGCATTTGAAGATTCTCACAATTGGAGAATTATGGTGCTGAATGAGAAGTGTTGGCTCAAGAGAAATCTTTTGCTTCAATTTTAAAGATTAAAATAAAGAATGATGTTCCTTGTTTTTACTGTTCTTATAGTTTGACCATTGGTTTCCAAATATGTACTTATGTACTTGCAGTTTTCTCATGAAGGTCCTGCCTACAGCCTACCCAAGAATCACCATTAATCTTAAAAGCTTATGCTATTAGAGTAAACCAAATTTCATCTTTTTTGTCTGCTTTCAAAACTCCCTTTGACTTGTGGGTTCGTATATATAAATTTGACCACAGTCCATGTCCAATGACTAAATATGTAGCTATATGAACAAAGTTCGATATATCTAAAACTTAGGCCTCCTGTTTGAATCATCACTAGATTCAAAAGTTTAAGAGCTTGTAATTTGGAATGACTGTCTAATTGCTTAAAAAATATTTTTAAGTGCAAAAGAAGTAGTCATTCCAAACGGGTCCTAAATTATTAAGATAGAGTAAGCTATTTGGGCTTCTTGATTGTGACTATATGCTTGGATTCATGAACTGGTGTTGATGCGTTCTAAGGGGGGATTAATTTTGTAGCATTGTGAATTCTAATGCAGGAAGAACTGGAACAGCTAGATAAACTGGACAAGGCATCGACAAAATGTAAAGAGTAAGCATGATATTTATTTCGGATCTGCTGAATTGAGTATCCATACAAAATAAAACTTAAAATAAAAGTATGAAAATCTCCAATTCATTTGTGAAATTGCTGTTTTTTGAACCTGTCAGAATGCTGAGCAATGTGGAGACAAGACCAGACCCTCTTCTCCCACTGTAGGATCTCTGTTCTTCTCTTTAAATTCATTGCTTTGTCTTCAACAAAAGAATTTCAAAAAATTATTCATTCTTCTGTCTCTATTTTTGGTTGTTTGTAGAACCCATGGCCCCATAAATCCGCTATGGGATCGATGGTTCGAAGGTCCACAAGATTCTAAAGGTTGCAGATGCTGGATATTGTGACATTGTTTGGATTTCTCTTTCAATTCATTACAGATTGGGAGATTGTGATGTGATGATCATTGCTACTTTGGAGATTTTAACTCCCATTCTCATTTGTTGTTTGCCAGAGGTTTCTTCAACTTAG

mRNA sequence

ATGTCCCAATCGGCTAGTCCAATAACCCAACGGGTTCAGTCTTCTTCTTCTTCTTCTTCGATTGATACCAGAGGAAAGCATCGGATTCAAGCTGAAGTGAAGCGGCTCGAGCAAGAAGCAAGGTTCCTGGAGGAAGAACTGGAACAGCTAGATAAACTGGACAAGGCATCGACAAAATGTAAAGAATTGGGAGATTGTGATGTGATGATCATTGCTACTTTGGAGATTTTAACTCCCATTCTCATTTGTTGTTTGCCAGAGGTTTCTTCAACTTAG

Coding sequence (CDS)

ATGTCCCAATCGGCTAGTCCAATAACCCAACGGGTTCAGTCTTCTTCTTCTTCTTCTTCGATTGATACCAGAGGAAAGCATCGGATTCAAGCTGAAGTGAAGCGGCTCGAGCAAGAAGCAAGGTTCCTGGAGGAAGAACTGGAACAGCTAGATAAACTGGACAAGGCATCGACAAAATGTAAAGAATTGGGAGATTGTGATGTGATGATCATTGCTACTTTGGAGATTTTAACTCCCATTCTCATTTGTTGTTTGCCAGAGGTTTCTTCAACTTAG

Protein sequence

MSQSASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKCKELGDCDVMIIATLEILTPILICCLPEVSST*

Homology

[Close]

BLAST of Chy5G094190 vs. ExPASy Swiss-Prot
Match: Q93V47 (Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana OX=3702 GN=GG2 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 5.1e-12
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 12 VQSSSSSSS-------IDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKCKELG 66
          +++ SS+SS       +DTRGKHRIQAE+KRLEQEARFLEEELEQL+K+D AS  CKE  
Sbjct: 1  MEAGSSNSSGQLSGRVVDTRGKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFL 60

[Close]

BLAST of Chy5G094190 vs. ExPASy Swiss-Prot
Match: B8AN27 (Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. indica OX=39946 GN=RGG1 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-09
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 12 VQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKCKEL 64
          +Q+     + DTRG+HRIQAE+K+LEQEARFLEEELE+LDK DK S   +EL
Sbjct: 1  MQAGGGGDAGDTRGRHRIQAELKKLEQEARFLEEELEELDKTDKVSAALQEL 52

[Close]

BLAST of Chy5G094190 vs. ExPASy Swiss-Prot
Match: Q75WU1 (Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGG1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.1e-09
Identity = 33/52 (63.46%), Postives = 41/52 (78.85%), Query Frame = 0


Query: 12 VQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKCKEL 64
          +Q+     + DTRG+HRIQAE+K+LEQEARFLEEELE+LDK DK S   +EL
Sbjct: 1  MQAGGGGDAGDTRGRHRIQAELKKLEQEARFLEEELEELDKTDKVSAALQEL 52

[Close]

BLAST of Chy5G094190 vs. ExPASy Swiss-Prot
Match: Q9FDX9 (Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana OX=3702 GN=GG1 PE=1 SV=1)

HSP 1 Score: 44.3 bits (103), Expect = 8.8e-04
Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 25 GKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKCKEL 64
          GKHRI AE+ R+EQE  FLE+EL++++  D  ST C+EL
Sbjct: 19 GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEEL 57

[Close]

BLAST of Chy5G094190 vs. ExPASy TrEMBL
Match: A0A5A7UVC9 (Guanine nucleotide-binding protein subunit gamma 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003410 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 9.3e-33
Identity = 89/106 (83.96%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 1   MSQSASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60
           MSQSASPITQRVQ SSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC
Sbjct: 1   MSQSASPITQRVQ-SSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60

Query: 61  KE---------------LGDCDVMIIATLEILTPILICCLPEVSST 92
           KE               LGDCD+MIIATLEILTPILICCLPEVSST
Sbjct: 61  KEMLSNVETRPDPLLPLLGDCDMMIIATLEILTPILICCLPEVSST 105

[Close]

BLAST of Chy5G094190 vs. ExPASy TrEMBL
Match: A0A0A0LIB4 (G protein gamma domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G215490 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.2e-21
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MSQSASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60
          MSQSASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC
Sbjct: 1  MSQSASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60

Query: 61 KEL 64
          KE+
Sbjct: 61 KEM 63

[Close]

BLAST of Chy5G094190 vs. ExPASy TrEMBL
Match: A0A1S3BLR0 (guanine nucleotide-binding protein subunit gamma 2-like OS=Cucumis melo OX=3656 GN=LOC103491222 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-19
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1  MSQSASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60
          MSQSASPITQRVQ SSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC
Sbjct: 1  MSQSASPITQRVQ-SSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60

Query: 61 KEL 64
          KE+
Sbjct: 61 KEM 62

[Close]

BLAST of Chy5G094190 vs. ExPASy TrEMBL
Match: A0A6J1H4R5 (guanine nucleotide-binding protein subunit gamma 2 OS=Cucurbita moschata OX=3662 GN=LOC111460041 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.5e-18
Identity = 58/64 (90.62%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 1  MSQSASPITQRVQ-SSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTK 60
          MS+S SPI QRVQ SSSSSSSIDTRGKHRIQAEVKRLEQEAR LEEELEQLDKLDKASTK
Sbjct: 1  MSESTSPIAQRVQSSSSSSSSIDTRGKHRIQAEVKRLEQEARILEEELEQLDKLDKASTK 60

Query: 61 CKEL 64
          CKE+
Sbjct: 61 CKEM 64

[Close]

BLAST of Chy5G094190 vs. ExPASy TrEMBL
Match: A0A6J1L5U6 (guanine nucleotide-binding protein subunit gamma 2 OS=Cucurbita maxima OX=3661 GN=LOC111499401 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 8.5e-18
Identity = 58/65 (89.23%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 1  MSQSASPITQRVQ--SSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKAST 60
          MS+S SPI QRVQ  SSSSSSSIDTRGKHRIQAEVKRLEQEAR LEEELEQLDKLDKAST
Sbjct: 1  MSESTSPIAQRVQSSSSSSSSSIDTRGKHRIQAEVKRLEQEARILEEELEQLDKLDKAST 60

Query: 61 KCKEL 64
          KCKE+
Sbjct: 61 KCKEM 65

[Close]

BLAST of Chy5G094190 vs. NCBI nr
Match: KAA0057461.1 (guanine nucleotide-binding protein subunit gamma 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 146 bits (369), Expect = 1.92e-43
Identity = 89/106 (83.96%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 1   MSQSASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60
           MSQSASPITQRVQSSSSSS IDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC
Sbjct: 1   MSQSASPITQRVQSSSSSS-IDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60

Query: 61  KE---------------LGDCDVMIIATLEILTPILICCLPEVSST 91
           KE               LGDCD+MIIATLEILTPILICCLPEVSST
Sbjct: 61  KEMLSNVETRPDPLLPLLGDCDMMIIATLEILTPILICCLPEVSST 105

[Close]

BLAST of Chy5G094190 vs. NCBI nr
Match: XP_004150567.1 (guanine nucleotide-binding protein subunit gamma 2 [Cucumis sativus] >KGN61655.1 hypothetical protein Csa_006431 [Cucumis sativus])

HSP 1 Score: 109 bits (273), Expect = 7.84e-29
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MSQSASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60
          MSQSASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC
Sbjct: 1  MSQSASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60

Query: 61 KEL 63
          KE+
Sbjct: 61 KEM 63

[Close]

BLAST of Chy5G094190 vs. NCBI nr
Match: XP_038875185.1 (guanine nucleotide-binding protein subunit gamma 2-like [Benincasa hispida])

HSP 1 Score: 108 bits (270), Expect = 2.24e-28
Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MSQSASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60
          MS+SASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC
Sbjct: 1  MSESASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60

Query: 61 KEL 63
          KE+
Sbjct: 61 KEM 63

[Close]

BLAST of Chy5G094190 vs. NCBI nr
Match: XP_008449308.1 (PREDICTED: guanine nucleotide-binding protein subunit gamma 2-like [Cucumis melo])

HSP 1 Score: 103 bits (258), Expect = 1.46e-26
Identity = 61/63 (96.83%), Postives = 62/63 (98.41%), Query Frame = 0


Query: 1  MSQSASPITQRVQSSSSSSSIDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60
          MSQSASPITQRVQSSSSSS IDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC
Sbjct: 1  MSQSASPITQRVQSSSSSS-IDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKC 60

Query: 61 KEL 63
          KE+
Sbjct: 61 KEM 62

[Close]

BLAST of Chy5G094190 vs. NCBI nr
Match: XP_022958890.1 (guanine nucleotide-binding protein subunit gamma 2 [Cucurbita moschata])

HSP 1 Score: 98.2 bits (243), Expect = 2.95e-24
Identity = 58/64 (90.62%), Postives = 60/64 (93.75%), Query Frame = 0


Query: 1  MSQSASPITQRVQSSSSSSS-IDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTK 60
          MS+S SPI QRVQSSSSSSS IDTRGKHRIQAEVKRLEQEAR LEEELEQLDKLDKASTK
Sbjct: 1  MSESTSPIAQRVQSSSSSSSSIDTRGKHRIQAEVKRLEQEARILEEELEQLDKLDKASTK 60

Query: 61 CKEL 63
          CKE+
Sbjct: 61 CKEM 64

[Close]

BLAST of Chy5G094190 vs. TAIR 10
Match: AT3G22942.1 (G-protein gamma subunit 2 )

HSP 1 Score: 71.6 bits (174), Expect = 3.6e-13
Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 12 VQSSSSSSS-------IDTRGKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKCKELG 66
          +++ SS+SS       +DTRGKHRIQAE+KRLEQEARFLEEELEQL+K+D AS  CKE  
Sbjct: 1  MEAGSSNSSGQLSGRVVDTRGKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFL 60

[Close]

BLAST of Chy5G094190 vs. TAIR 10
Match: AT3G63420.1 (Ggamma-subunit 1 )

HSP 1 Score: 44.3 bits (103), Expect = 6.2e-05
Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 25 GKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKCKEL 64
          GKHRI AE+ R+EQE  FLE+EL++++  D  ST C+EL
Sbjct: 19 GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEEL 57

[Close]

BLAST of Chy5G094190 vs. TAIR 10
Match: AT3G63420.2 (Ggamma-subunit 1 )

HSP 1 Score: 44.3 bits (103), Expect = 6.2e-05
Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 25 GKHRIQAEVKRLEQEARFLEEELEQLDKLDKASTKCKEL 64
          GKHRI AE+ R+EQE  FLE+EL++++  D  ST C+EL
Sbjct: 19 GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEEL 57

The following BLAST results are available for this feature:

BLAST of Chy5G094190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93V47	5.1e-12	65.57	Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana OX=37...	[more]
B8AN27	3.1e-09	63.46	Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. indica...	[more]
Q75WU1	3.1e-09	63.46	Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. japoni...	[more]
Q9FDX9	8.8e-04	56.41	Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Chy5G094190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVC9	9.3e-33	83.96	Guanine nucleotide-binding protein subunit gamma 2-like OS=Cucumis melo var. mak...	[more]
A0A0A0LIB4	2.2e-21	98.41	G protein gamma domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G21...	[more]
A0A1S3BLR0	1.2e-19	96.83	guanine nucleotide-binding protein subunit gamma 2-like OS=Cucumis melo OX=3656 ...	[more]
A0A6J1H4R5	6.5e-18	90.63	guanine nucleotide-binding protein subunit gamma 2 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1L5U6	8.5e-18	89.23	guanine nucleotide-binding protein subunit gamma 2 OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of Chy5G094190 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057461.1	1.92e-43	83.96	guanine nucleotide-binding protein subunit gamma 2-like [Cucumis melo var. makuw...	[more]
XP_004150567.1	7.84e-29	98.41	guanine nucleotide-binding protein subunit gamma 2 [Cucumis sativus] >KGN61655.1...	[more]
XP_038875185.1	2.24e-28	96.83	guanine nucleotide-binding protein subunit gamma 2-like [Benincasa hispida]	[more]
XP_008449308.1	1.46e-26	96.83	PREDICTED: guanine nucleotide-binding protein subunit gamma 2-like [Cucumis melo...	[more]
XP_022958890.1	2.95e-24	90.63	guanine nucleotide-binding protein subunit gamma 2 [Cucurbita moschata]	[more]

BLAST of Chy5G094190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22942.1	3.6e-13	65.57	G-protein gamma subunit 2	[more]
AT3G63420.1	6.2e-05	56.41	Ggamma-subunit 1	[more]
AT3G63420.2	6.2e-05	56.41	Ggamma-subunit 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..91
None	No IPR available	COILS	Coil	Coil	coord: 26..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR32378:SF12	GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 2	coord: 3..63
None	No IPR available	PANTHER	PTHR32378	GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 3	coord: 3..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G094190.1	Chy5G094190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G protein-coupled receptor signaling pathway