Chy5G092040 (gene) Cucumber (hystrix) v1

Overview
NameChy5G092040
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH05: 1237385 .. 1238415 (+)
RNA-Seq ExpressionChy5G092040
SyntenyChy5G092040
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTTGAGCTTTCGTCCGCCGGCGCTTCGGCCCATTTAAGATCAAAACTACGGGCCAGGCTAGAAAATGCCTACGAAATGGGCTTTCATGGGTCCCAATAGGACTAAGCCCAAAATTAGAAATGAAAATATAAAAATTCCGTTGCCGGGAATCGAACCCGGGTCTCCTGGGTGAAAGCCAGATATCCTAGCCGCTGGACGACAACGGATTGCTGAGAGATAATCCTGACGTTAATAATATATTGTTGTAGATTACCCTCAATTTTTATAAAAATAACAGTTAAGTACTTGAACTTTCAATTTTGTGAAAATTTAGTTATTATGCCTCAAAATTTATAACAATTTAGTCCCCACTATAGAATTAAGTGTAAAATTTTACTAAGATTTCTTCCTAAATAAATAAGTAGACAACTTCGAGATTCAATAATTTTGAAAAAAACTGTCTGTCATAAAATACTAGAAATTGACATCATAAATTTTGTTTAGGTTTGAACTAAATTGTTACAAATTTGAAAGTTCGAGAACTAGATTGTTACAAACAAAAATTTAATGACTAAATCGATATAAAATTGAAAATACAAGATTAAATGGTTACTTTTACGAAGGTAAGACCAAAAGTATGTTTTAACCTTAAATCCTTAAATGAATTAGTCAAACCATGTATGACCCTTTAACAATATCTCTACTATTGAAATTATACTTGAAAATTTCATATGATAAATATTTAAAATAAATAACATTTATGGCTAAAGTAATGGTTAGAGGATCACAAAAGATATATTGTACTAATCTATTGACCATTAAAATTTTCCAGCTAAAAGAATACCTTCGATCACAAACGACACCTCCTGAGGATCAACTCTTGTATTGAGCTTTTTCTGATGACTTGAGAAAATGGCATGATTCCAACTTGTAGTTGTAGGCAAAATTTACAGCCCCTACCACAAACAGCTACAGCAGCAAAACTTGAGCCACCATTTTTAATGGCAATGGAGATCTTTGGGAGGAAACTTTGTCACATTTGTTGA

mRNA sequence

ATGGGTTTTGAGCTTTCGTCCGCCGGCGCTTCGGCCCATTTAAGATCAAAACTACGGGCCAGGCTAGAAAATGCCTACGAAATGGGCTTTCATGGGCAAAATTTACAGCCCCTACCACAAACAGCTACAGCAGCAAAACTTGAGCCACCATTTTTAATGGCAATGGAGATCTTTGGGAGGAAACTTTGTCACATTTGTTGA

Coding sequence (CDS)

ATGGGTTTTGAGCTTTCGTCCGCCGGCGCTTCGGCCCATTTAAGATCAAAACTACGGGCCAGGCTAGAAAATGCCTACGAAATGGGCTTTCATGGGCAAAATTTACAGCCCCTACCACAAACAGCTACAGCAGCAAAACTTGAGCCACCATTTTTAATGGCAATGGAGATCTTTGGGAGGAAACTTTGTCACATTTGTTGA

Protein sequence

MGFELSSAGASAHLRSKLRARLENAYEMGFHGQNLQPLPQTATAAKLEPPFLMAMEIFGRKLCHIC*
Homology
[Close]
BLAST of Chy5G092040 vs. NCBI nr
Match: KAE8647373.1 (hypothetical protein Csa_002765 [Cucumis sativus])

HSP 1 Score: 77.0 bits (188), Expect = 9.42e-17
Identity = 34/39 (87.18%), Postives = 36/39 (92.31%), Query Frame = 0 

Query: 28 MGFHGQNLQPLPQTATAAKLEPPFLMAMEIFGRKLCHIC 66
          + +  QNLQPLPQTATAAKLEPPFLMAMEIFGRKLCHIC
Sbjct: 30 LSWDQQNLQPLPQTATAAKLEPPFLMAMEIFGRKLCHIC 68

The following BLAST results are available for this feature:
BLAST of Chy5G092040 vs.
Match NameE-valueIdentityDescription
BLAST of Chy5G092040 vs.
Match NameE-valueIdentityDescription
BLAST of Chy5G092040 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647373.19.42e-1787.18hypothetical protein Csa_002765 [Cucumis sativus][more]
BLAST of Chy5G092040 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy5G092040.1Chy5G092040.1mRNA