Chy5G091080 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCCCTCAGCTCATTTCTTGTTTGCTGCCTTGGCTCTCCTTTCTGTGGGGTTTGTGAGCTCCAACATAGACCAAGACAGGGCGGAGTGTGCGGACCAGGTGGTTGGCCTCGCTACTTGCTTGCCATATGTGGGCGGTGAGGCTAAGGCACCCACCCCTGACTGCTGTAGTGGGCTTAAGCTTGTGCTTGATAAGAGTAGGAAATGTCTTTGTGTGTTGATTAAGGACCGTGATGACCCTAGCCTTGGACTCAAAGTTAACCTTTCCCTCGCCCTTGGTCTTCCTTCTGCTTGTCACGCCCCTGCCAACATCAAAGATTGCATCGGTATGCTTTCTTCCTTGTTAGATGATATATATTTAAATTTACGTTCATTCATGATGTTAAACTTCTGGATTAATAGATTGTTTAAGACCGTACCACAGTATTATCTTGTAATGTTAAATGATTTACATTTAAATTTACTTTCACTCACATGTTTAAATTTTTAAGTTAATTGGTGATTTAAGACTTTCATTATTGATAATGAAAAAAATACTAAATATTCATCCTGACGTTTATCTATCTTTATGATCTTCTTATTTGTTCTCTGACTAGTTCTTCTTAGTTCCTTTAGATGGTGTAGTCCAGTCTAAAAAATTTTGATTTTTTAAAAAACATTAAAGTGTGCTTTTAAAAATAGAATGAGATATAGGGATATTAACATAGGGTTTAATAGTATTTATAGTATGAAAATATAGAAAGTATTATACTTCTATTTATTGTACCTAATTATTTTCCCTCAATTAGTTGTTTATACTATAGGAGATATAATAATAAAGAAAAATTGAAATATTAATTTTTCTATTTATTGTACATCACATTAACGTGTTTCTAAAAATAAGATGAGACCCACGAACATTAATATGAGAGGTCCATTGATAGCGTGTCCATAGTAAATATATGATACTCTTGGTACTAAAAAATTTCTCGGAAGGACGATGCACTTAAGTATTGGTCTTTTCATACTCAATTATTGTTATTATTATTTTGTAATTGAGTATGTATATTATGTGTGTGAATATAGGGCTTCTCCATCTCTCGCCAAACTCCCCAGAGGCAAAAGATTTTTTGGGTTCATCCAACTCCAAGGGAACTAACACTTCTACGCCAGCACATGCTACTCCGGGTATTAGCTCAAAACCCTTTTTCTTTTCAAAAATTTTATTTAAATTTCTCAACTATAAAAAACAAACTAATTTCGGACCCGTTTGGATTAACTTGAGAAAACTTGATTTTTCTAAACACTTTTAACAAAAATTGTTTAAAATACGTACACTTTAAAACTTCCCTAAAATATCTTAATTTTTACATTCAACACTTGAAAATGTATTCCAATATCACTAAATTAAGATTGGTGATATGTTGTTTTAATAAATGAATACCTTGGCTACAAGTGCATCCATCATGCCCACGTTGAGGATCTATACTACACTTTAATATTTATAATGTAGATGAGTTACACCGTTCTCGAGTAAAAAAGGAGATTAATTATGGATTACGATTTAGAAGGGAAGTAAATGTAATTTTTTGTTTGTGTTAAATTGTTGCAGTTGGTGGGAGTTCTTCACAAAACTCAGAAGTGAAGAATGATGGAACGAAGAGGAATCAGTGGTTGGGTGTGGAGATGTTCATTTGGTTCATTACTTCATCGTTTCTATTCACTTGTATTTGGTAA ATGGCTCCCTCAGCTCATTTCTTGTTTGCTGCCTTGGCTCTCCTTTCTGTGGGGTTTGTGAGCTCCAACATAGACCAAGACAGGGCGGAGTGTGCGGACCAGGTGGTTGGCCTCGCTACTTGCTTGCCATATGTGGGCGGTGAGGCTAAGGCACCCACCCCTGACTGCTGTAGTGGGCTTAAGCTTGTGCTTGATAAGAGTAGGAAATGTCTTTGTGTGTTGATTAAGGACCGTGATGACCCTAGCCTTGGACTCAAAGTTAACCTTTCCCTCGCCCTTGGTCTTCCTTCTGCTTGGCTTCTCCATCTCTCGCCAAACTCCCCAGAGGCAAAAGATTTTTTGGGTTCATCCAACTCCAAGGGAACTAACACTTCTACGCCAGCACATGCTACTCCGGTTGGTGGGAGTTCTTCACAAAACTCAGAAGTGAAGAATGATGGAACGAAGAGGAATCAGTGGTTGGGTGTGGAGATGTTCATTTGGTTCATTACTTCATCGTTTCTATTCACTTGTATTTGGTAA ATGGCTCCCTCAGCTCATTTCTTGTTTGCTGCCTTGGCTCTCCTTTCTGTGGGGTTTGTGAGCTCCAACATAGACCAAGACAGGGCGGAGTGTGCGGACCAGGTGGTTGGCCTCGCTACTTGCTTGCCATATGTGGGCGGTGAGGCTAAGGCACCCACCCCTGACTGCTGTAGTGGGCTTAAGCTTGTGCTTGATAAGAGTAGGAAATGTCTTTGTGTGTTGATTAAGGACCGTGATGACCCTAGCCTTGGACTCAAAGTTAACCTTTCCCTCGCCCTTGGTCTTCCTTCTGCTTGGCTTCTCCATCTCTCGCCAAACTCCCCAGAGGCAAAAGATTTTTTGGGTTCATCCAACTCCAAGGGAACTAACACTTCTACGCCAGCACATGCTACTCCGGTTGGTGGGAGTTCTTCACAAAACTCAGAAGTGAAGAATGATGGAACGAAGAGGAATCAGTGGTTGGGTGTGGAGATGTTCATTTGGTTCATTACTTCATCGTTTCTATTCACTTGTATTTGGTAA MAPSAHFLFAALALLSVGFVSSNIDQDRAECADQVVGLATCLPYVGGEAKAPTPDCCSGLKLVLDKSRKCLCVLIKDRDDPSLGLKVNLSLALGLPSAWLLHLSPNSPEAKDFLGSSNSKGTNTSTPAHATPVGGSSSQNSEVKNDGTKRNQWLGVEMFIWFITSSFLFTCIW* Homology
BLAST of Chy5G091080 vs. ExPASy Swiss-Prot
Match: F4I082 (Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=3702 GN=LTPG6 PE=2 SV=2) HSP 1 Score: 141.7 bits (356), Expect = 7.6e-33 Identity = 80/186 (43.01%), Postives = 112/186 (60.22%), Query Frame = 0
BLAST of Chy5G091080 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.7e-32 Identity = 84/200 (42.00%), Postives = 117/200 (58.50%), Query Frame = 0
BLAST of Chy5G091080 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.3e-29 Identity = 78/194 (40.21%), Postives = 111/194 (57.22%), Query Frame = 0
BLAST of Chy5G091080 vs. ExPASy Swiss-Prot
Match: Q9M2G1 (Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3702 GN=LTPG22 PE=2 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.8e-18 Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 0
BLAST of Chy5G091080 vs. ExPASy Swiss-Prot
Match: F4HZB9 (Non-specific lipid transfer protein GPI-anchored 19 OS=Arabidopsis thaliana OX=3702 GN=LTPG19 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.8e-08 Identity = 41/134 (30.60%), Postives = 62/134 (46.27%), Query Frame = 0
BLAST of Chy5G091080 vs. ExPASy TrEMBL
Match: A0A0A0KZ48 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G280560 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 3.1e-85 Identity = 169/185 (91.35%), Postives = 169/185 (91.35%), Query Frame = 0
BLAST of Chy5G091080 vs. ExPASy TrEMBL
Match: A0A5D3DDD4 (Protein YLS3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00450 PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.6e-78 Identity = 161/186 (86.56%), Postives = 166/186 (89.25%), Query Frame = 0
BLAST of Chy5G091080 vs. ExPASy TrEMBL
Match: A0A1S3BMU8 (protein YLS3 OS=Cucumis melo OX=3656 GN=LOC103491579 PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.6e-78 Identity = 161/186 (86.56%), Postives = 166/186 (89.25%), Query Frame = 0
BLAST of Chy5G091080 vs. ExPASy TrEMBL
Match: A0A6J1JBX4 (protein YLS3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484364 PE=4 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 2.7e-57 Identity = 124/174 (71.26%), Postives = 139/174 (79.89%), Query Frame = 0
BLAST of Chy5G091080 vs. ExPASy TrEMBL
Match: A0A6J1J894 (protein YLS3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484364 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 2.3e-56 Identity = 124/174 (71.26%), Postives = 139/174 (79.89%), Query Frame = 0
BLAST of Chy5G091080 vs. NCBI nr
Match: XP_011653558.1 (protein YLS3 [Cucumis sativus] >KGN54079.1 hypothetical protein Csa_018100 [Cucumis sativus]) HSP 1 Score: 325 bits (832), Expect = 2.02e-111 Identity = 169/185 (91.35%), Postives = 169/185 (91.35%), Query Frame = 0
BLAST of Chy5G091080 vs. NCBI nr
Match: XP_008449799.1 (PREDICTED: protein YLS3 [Cucumis melo] >KAA0040058.1 protein YLS3 [Cucumis melo var. makuwa] >TYK21681.1 protein YLS3 [Cucumis melo var. makuwa]) HSP 1 Score: 302 bits (774), Expect = 1.45e-102 Identity = 161/186 (86.56%), Postives = 166/186 (89.25%), Query Frame = 0
BLAST of Chy5G091080 vs. NCBI nr
Match: XP_038900291.1 (non-specific lipid transfer protein GPI-anchored 6 [Benincasa hispida]) HSP 1 Score: 259 bits (663), Expect = 1.06e-85 Identity = 139/185 (75.14%), Postives = 151/185 (81.62%), Query Frame = 0
BLAST of Chy5G091080 vs. NCBI nr
Match: XP_023512874.1 (protein YLS3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 232 bits (591), Expect = 1.03e-74 Identity = 125/174 (71.84%), Postives = 140/174 (80.46%), Query Frame = 0
BLAST of Chy5G091080 vs. NCBI nr
Match: XP_022986686.1 (protein YLS3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 231 bits (588), Expect = 2.96e-74 Identity = 124/174 (71.26%), Postives = 139/174 (79.89%), Query Frame = 0
BLAST of Chy5G091080 vs. TAIR 10
Match: AT1G55260.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 141.7 bits (356), Expect = 5.4e-34 Identity = 80/186 (43.01%), Postives = 112/186 (60.22%), Query Frame = 0
BLAST of Chy5G091080 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33 Identity = 84/200 (42.00%), Postives = 117/200 (58.50%), Query Frame = 0
BLAST of Chy5G091080 vs. TAIR 10
Match: AT1G55260.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 139.4 bits (350), Expect = 2.7e-33 Identity = 76/183 (41.53%), Postives = 108/183 (59.02%), Query Frame = 0
BLAST of Chy5G091080 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 130.2 bits (326), Expect = 1.6e-30 Identity = 78/194 (40.21%), Postives = 111/194 (57.22%), Query Frame = 0
BLAST of Chy5G091080 vs. TAIR 10
Match: AT3G58550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein ) HSP 1 Score: 94.0 bits (232), Expect = 1.3e-19 Identity = 65/174 (37.36%), Postives = 92/174 (52.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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