Chy5G090820 (gene) Cucumber (hystrix) v1

Overview


Name	Chy5G090820
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Location	chrH05: 245394 .. 248960 (-)
RNA-Seq Expression	Chy5G090820
Synteny	Chy5G090820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTAGCGGCCCACTCAGAGAGGATCAGTTTCATTTGCTGTTTAAGCGAATCACCGGAAAAACTCCAGGTTCCATTTTCCCTCTCTCTCTCTCTCTATATATATATATATATATATATTCTGCTTGATATCCAAGATCACGAATTCCTGCTCCATTTTGTCTTACAAACGATGTAGTATGCGTTTCTCAACAAGTGAATTTGAATCATCATAAATCTATATGCAAATGCCACATAATTGTTGTAATCGAATGGTAATGCTAATGGAACCACTTATTGGAAGAAATTTAATATGGGTTCATATCCGTGTACGCATTGGAATTGTTTATCCTCTTCGGAGGTTGATCCTTATAGAATTTATTGTTTTCAAAGGCGGTAATCAATACTCTTATAGACACTTCTCTATCCTTAATCTACCGGCTGATTTAGTATATACTCAGAGGCTCGAGCACACCTCAACTCTAAGCTTAGGTTCAAGCTCACTCCATACATTTTTTTTCCAAATTATTTTTCCTTAACTATAAAGCCTCCATTAACAAAATTTTTGGATCTACCGCTGCCTTAATCAATAGCTTTAGCCATTGTAAATAAAGAGCATCTTTAATTGATAATTTTTCTGGGAAACAATATACTAGTACTACTTATTTAGGATGATGGTGAAAGCTTATGTATGTTTAATGTTTGTCTCGATGCAGATAATGACCAGCAGGTTTTTAACAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATACGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTTTAAAGCCATCGTACGTGAGGTTCTTCAACCTCTTCTTCCATATTTATTGTTCAGATTTGGATATTGATCAGATATCTGTTAAATAAAGATATTGAAGTTGTCATCATCTTCATTCTTATTGGATTGGCTGTGAATGTGAATGTTAGTAGATCAAACGTGAGATTCCAAAAAATGTGGAAAATTGAACCTCCCTATTAGCCAAATAGTTGCAGAAAAGTCTCTATTGACTGTTTGACTGTCAAAAGAGAAATGGCTATAAAGCAGCTAAAGAGAGTACACAATCTAAAAACGTGATAGATAATTTTATCAATAGTCTTTTGCGAAGTATAGGAGGCTTCCTCGACGCTCATTTCCTATCCAACAACCAAGACTATTGCACCCTGCCAAGAGCCTCCAAAATACAATGATCTTATCAATGAATCCATTGCAAATGATCAGTGGAAAGATGCTCTCTAAATTCTGATCATCTTGGGTTTATATTGTTTGAAATATGTTATAAGTTTCTCATCTCTTGTAATGATTTTTTCATTGTAATCTCAAGTATTTTGTTTATTCTATCACTGTTATAAGCCCATACTCGGTTAAGTTGTTTCAAATATCCCACTCAACTGACAACTCATTTGCCAACTCTCTCCGAGAATTTGGAGAGAGGAATGAGGGGTAGCTTCTTCAGAAATTTGATTATTAACTACACAGGATTTGGTAATGGTGACTTTAACGGCTCAGGTTTATGCTGCATCAATTATTGTATTATCAACAATGGGAATTGTTGGAGCCCACAATAAACCGCCTCTTCTGCTAATTTGCTTAATAGTCAACATGGGAGCTTAGTGTTTGCATTACATGCATTTTTTTTGTTGTTGTGTCGCTGCAGTATTTGTTAAAAGCAAAAGGAATTGCTTTGTCAGGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGGTTTCCCTTGTTGTCTTTGACCAATACTTCCATTTTGTCTAGCCCAATCTACTGAAGTGTGATGCCAGAATTCTTTTAAGTCCATTGTCAAAGTCGGCTCCATATTTAACTGAACTTGGCTTCTCTGGTCTTTTGCTTTATAAATATGAGTATATGACTACCTTCAGTTACTGTGTACTGTGGACAGGAACATTTTTCACGTTTTTCACGTTTCTTGTGGAGAGATTTCTTTGGAATGAGTTCCACAAGAGTATCAACTCATATTTAGGGTATTCCATTTGTAGATTCTTGAATTATGATTTTATACTAGCTTCGTTTTTCTTAAACTTAGATATTGAGAATGAAGTTTTAAGAGTTTTCTACATGGTAAATGCTCCTATCTTATCAATCAAATTGGGATATTGGAACTGTTAGTCTGACAGTAGCATGAATGACTCTAGTAGTTTTCTACATGCATTCAATTATTTGCTATGGAGTCACTCTCAAATTTGTTGTTTTTACTTCTTTCTTTTCTGATACTTGATTGTGTATAACTGTTAAATTTTAAACCAAGAGTTTAAGGCCGCTTTTAAATTCTACACAATTTGGTTGCAAGGCTTTTGATTTGCCAAATTTCACCATTGTGGGTAAAGTTGAAAAGAGAACCGACAAACTTTCCAGCCCCTTGTATTTGTATCAGTGTATGCATTTATCTGCTTCTTCACATATTTAAGGGTTCTATTGTATAATACTCATGTGCATTGTTTGACTATTACTGTTTTTAACTGCCAGCTGGGGGATACAGGGTCCCAGTCCCAAGTCATACCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGATGGCTTTGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGATGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGTTCTCTTCTTGATTGGAGACCTCTCTTTTTCCTTTTCTTGTGGGCTCTATTTTTATGTCCTTTTATTCTCTCGTTCTTTATTAAAGAAAGTTCAGTTTCACATAAAAAATAAGCTTTGTTGCTGCATTATTTTACTTAATGCCCCCACTGATAGAAGAACCTAAGCTCCATATAGTTTTGCTGTAGAGATCGATAAGAAAACTTATCTCCTTGATGATTTATATTTTGTTGGGCTTGCCATTCACAGGCAGAGTTGTGTAGTAGTGAAGTTTGCACTGTCCGGGTCCATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGGTAACAATAATATGATGTGGTACCTCCTATTTAAATTTTAATCAGTAAACTCTCTCGGGCCTAATAGTTATTTCATTGACTACTATTAGAGTAAAAAGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAACGTCCAACATAGAGCCCAAGGAGGAAGAGGATGAGCCGGATACACGCACTCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAGGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAATACCGCAGAAGCGTCCCAACCTCCTCCTACAAGGAGAACAACAAGAAATTCTGCATGCCAGCGGTAG

mRNA sequence

ATGTCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTAGCGGCCCACTCAGAGAGGATCAGTTTCATTTGCTGTTTAAGCGAATCACCGGAAAAACTCCAGATAATGACCAGCAGGTTTTTAACAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATACGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTTTAAAGCCATCGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGCTGGGGGATACAGGGTCCCAGTCCCAAGTCATACCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGATGGCTTTGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGATGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAGTGAAGTTTGCACTGTCCGGGTCCATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAAGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAACGTCCAACATAGAGCCCAAGGAGGAAGAGGATGAGCCGGATACACGCACTCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAGGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAATACCGCAGAAGCGTCCCAACCTCCTCCTACAAGGAGAACAACAAGAAATTCTGCATGCCAGCGGTAG

Coding sequence (CDS)

ATGTCAGAACTGAGTTGGAGACATCACACTCTCATTCAATCGCTACTCTCTAGCGGCCCACTCAGAGAGGATCAGTTTCATTTGCTGTTTAAGCGAATCACCGGAAAAACTCCAGATAATGACCAGCAGGTTTTTAACAGTTACCTCCTGACTATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATACGATGGACGTGTTTACTATGGCTTGGTAAATAATGTATCTGACGACCAATCCAAGCTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTTTAAAGCCATCGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCAAATATTTCTGCTCTTAATCTGCAGCTGGAAAATCAGCTGGGGGATACAGGGTCCCAGTCCCAAGTCATACCAGCTGCTTTCAAGAATTTCTCAAAATCTCACAAGGAAAAAACAATTGCCGAGCTTGCTCAGGATAAGTGGCTTGATTGCACCCCTGATGGCTTTGTAAATTTGGGCGTCCGATCGTTTCTTGATTTGCGAAGTTGGTTCCGCAGCAATGATGTACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAGTGAAGTTTGCACTGTCCGGGTCCATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAAGGCCTGTCCAGGTTGTGGCACTCGATGGCAATCTACAACGTCCAACATAGAGCCCAAGGAGGAAGAGGATGAGCCGGATACACGCACTCAAGATCAACCATCATCACATAAGAGGAAGAAATCCAGGTTGAACGTAGATATTGATTTAGGACCAAACGAAGACAATACCGCAGAAGCGTCCCAACCTCCTCCTACAAGGAGAACAACAAGAAATTCTGCATGCCAGCGGTAG

Protein sequence

MSELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISNISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDNTAEASQPPPTRRTTRNSACQR*

Homology

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BLAST of Chy5G090820 vs. ExPASy Swiss-Prot
Match: Q6PAF4 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX=8355 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 3.9e-11
Identity = 55/209 (26.32%), Postives = 92/209 (44.02%), Query Frame = 0


Query: 71  DGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISNISALNLQLEN 130
           DG  YY LVN V +D +K+ + Y+  ++  F+  +E I    S  G  ++IS LNL  E 
Sbjct: 73  DGLTYYALVNRVENDITKMASDYAENELELFRKTMELIIL--SDNGFATSISILNLADEL 132

Query: 131 QLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFR 190
           Q               K   K   E+ +    Q+KWL    +G   L  R  ++L  + R
Sbjct: 133 Q--------------SKKMKKKEVEQLLQSFVQEKWL-IGRNGEYTLHTRCIMELEHYIR 192

Query: 191 S--NDVPS-CEVCNEAGVKAELCSSEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQST 250
           +   DV   C VC +  ++++LC  E C + +H  C  K   + K+   CP C   W   
Sbjct: 193 NTYQDVAKICNVCRKVAIQSQLC--ENCGIPLHLQCAGKYF-HGKANPTCPNCNESWPHE 252

Query: 251 TSNIEPKEEEDEPDTRTQDQPSSHKRKKS 277
             ++     +    ++T+     ++R K+
Sbjct: 253 IPDLNQVSSQGPSHSQTETVRGRNQRSKN 261

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BLAST of Chy5G090820 vs. ExPASy Swiss-Prot
Match: Q6P881 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicalis OX=8364 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-08
Identity = 64/279 (22.94%), Postives = 112/279 (40.14%), Query Frame = 0


Query: 3   ELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDN-DQQVFNSYLLTINKALSFAQF 62
           +++  H   +Q L+S G +       L +        N      + ++  +NK L     
Sbjct: 4   QINESHQRFLQVLMSHGIMESSLVRALHRHCCEVHKVNYMHDNLDDFVGVLNKHLQPLFM 63

Query: 63  ELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISNI 122
           ++     + DG  YY LVN V +D +K+ + Y+  ++  F+  +E I    S  G    I
Sbjct: 64  KIEKGVGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELII--ISENGFAPPI 123

Query: 123 SALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVRS 182
           S LNL  E Q               K   K   E+ +    QDKWL    +G   L  R 
Sbjct: 124 SILNLADELQ--------------SKKMKKKEVEQLLQSFVQDKWL-IGRNGEYTLHTRC 183

Query: 183 FLDLRSWFRS--NDVPS-CEVCNEAGVKAELCSSEVCTVRVHQYCLKKMLSNKKSKKACP 242
            ++L  +  +   DV   C VC++  ++ +LC  E C + +H  C   +     +   CP
Sbjct: 184 IMELEHYILNTYQDVAKICNVCHKIAIQCQLC--ENCGIPLHLQC-AGIYFRGIANPLCP 243

Query: 243 GCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSR 278
            C   W     ++   +   +  + +Q  P   + ++SR
Sbjct: 244 NCKESWPHEIPDL--SQVSSQGPSHSQAAPVRGRNQRSR 260

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BLAST of Chy5G090820 vs. ExPASy TrEMBL
Match: A0A0A0KZ19 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis sativus OX=3659 GN=Csa_4G269750 PE=3 SV=1)

HSP 1 Score: 608.6 bits (1568), Expect = 1.5e-170
Identity = 302/311 (97.11%), Postives = 306/311 (98.39%), Query Frame = 0


Query: 1   MSELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQSLLS GPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA FKAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR
Sbjct: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFRSNDVPSCEVCNEAGVKAELCS+EVCTVRVHQYCLKKMLSNKKSKKACPGC
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSTEVCTVRVHQYCLKKMLSNKKSKKACPGC 240

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDNTAEASQPPPT 300
           GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNED+TAEASQPPPT
Sbjct: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDSTAEASQPPPT 300

Query: 301 RRTTRNSACQR 312
           RRTTR+SA QR
Sbjct: 301 RRTTRSSARQR 311

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BLAST of Chy5G090820 vs. ExPASy TrEMBL
Match: A0A1S3BMD8 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis melo OX=3656 GN=LOC103491611 PE=3 SV=1)

HSP 1 Score: 595.1 bits (1533), Expect = 1.7e-166
Identity = 297/312 (95.19%), Postives = 302/312 (96.79%), Query Frame = 0


Query: 1   MSELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQSLLS GPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           ISALNLQLENQLGDTG QSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP+GFVNLGVR
Sbjct: 121 ISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVR 180

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVH+YCLKKMLSNKKSK+ACPGC
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGC 240

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDNTAEASQPPP- 300
           GTRWQST SNIE KEE DEPDTRTQDQPSSHKRKKS+LNVDIDLGPNED+TAEASQPPP 
Sbjct: 241 GTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD 300

Query: 301 TRRTTRNSACQR 312
           TRR TRNS  QR
Sbjct: 301 TRRATRNSTRQR 312

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BLAST of Chy5G090820 vs. ExPASy TrEMBL
Match: A0A6J1JYV1 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.4e-144
Identity = 261/314 (83.12%), Postives = 286/314 (91.08%), Query Frame = 0


Query: 1   MSELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQ+LL+ GPLRED FHLLF RIT K+PDND+Q+FN+YLLT+NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           I+AL+LQLENQLGD GSQS VIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFR+ND+PSCEVCNEAGVKAELCS+E CTVRVH+YCLKKMLSNKKSK+ACP C
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDN--TAEASQPP 300
           GT+W+ST  N+E KEEEDEPD R Q Q SSHKRKK+RLN DID GPN D+   A+ASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 P-TRRTTRNSACQR 312
           P TRR TR+SA QR
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]

BLAST of Chy5G090820 vs. ExPASy TrEMBL
Match: A0A6J1K5P2 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 522.3 bits (1344), Expect = 1.4e-144
Identity = 261/314 (83.12%), Postives = 286/314 (91.08%), Query Frame = 0


Query: 1   MSELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQ+LL+ GPLRED FHLLF RIT K+PDND+Q+FN+YLLT+NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           I+AL+LQLENQLGD GSQS VIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFR+ND+PSCEVCNEAGVKAELCS+E CTVRVH+YCLKKMLSNKKSK+ACP C
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDN--TAEASQPP 300
           GT+W+ST  N+E KEEEDEPD R Q Q SSHKRKK+RLN DID GPN D+   A+ASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 P-TRRTTRNSACQR 312
           P TRR TR+SA QR
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]

BLAST of Chy5G090820 vs. ExPASy TrEMBL
Match: A0A6J1DI86 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 3.1e-144
Identity = 261/313 (83.39%), Postives = 287/313 (91.69%), Query Frame = 0


Query: 1   MSELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQ+LL+ GPLREDQFHL+F RITGK+PDNDQQ+FN+YLL INKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQ-SQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGV 180
           I+AL+LQLENQLGD GSQ SQVIP AFKNFS S KEKTIAELAQD+WL+CTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHQYCLKKMLSNKKSKKACPG 240
           RSFLDLRSWFR+ND+PSCEVCNEAGVKAELC +E CTVRVHQYCLKKMLSNKKSK+ACPG
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDNTAEASQPPP 300
           CGT+W+ST +N+E KEEEDEPD RTQ Q SS +RKKSRLN+D+D   ++ N A ASQPPP
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMD---SDSNGASASQPPP 300

Query: 301 -TRRTTRNSACQR 312
            TRR TR+SA QR
Sbjct: 301 ETRRVTRSSARQR 310

[Close]

BLAST of Chy5G090820 vs. NCBI nr
Match: XP_008449859.1 (PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis melo])

HSP 1 Score: 591 bits (1523), Expect = 2.50e-212
Identity = 297/312 (95.19%), Postives = 302/312 (96.79%), Query Frame = 0


Query: 1   MSELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQSLLS GPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           ISALNLQLENQLGDTG QSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTP+GFVNLGVR
Sbjct: 121 ISALNLQLENQLGDTGPQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPEGFVNLGVR 180

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVH+YCLKKMLSNKKSK+ACPGC
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHRYCLKKMLSNKKSKRACPGC 240

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDNTAEASQPPP- 300
           GTRWQST SNIE KEE DEPDTRTQDQPSSHKRKKS+LNVDIDLGPNED+TAEASQPPP 
Sbjct: 241 GTRWQSTMSNIESKEEVDEPDTRTQDQPSSHKRKKSKLNVDIDLGPNEDSTAEASQPPPD 300

Query: 301 TRRTTRNSACQR 311
           TRR TRNS  QR
Sbjct: 301 TRRATRNSTRQR 312

[Close]

BLAST of Chy5G090820 vs. NCBI nr
Match: XP_031740711.1 (non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus] >XP_031740712.1 non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus])

HSP 1 Score: 569 bits (1466), Expect = 3.42e-203
Identity = 294/340 (86.47%), Postives = 300/340 (88.24%), Query Frame = 0


Query: 1   MSELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQSLLS GPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA FKAIVEAIAQD SAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 120

Query: 121 ISALNLQLENQLGD-------------TGSQSQVI----------------PAAFKNFSK 180
           ISALNLQLENQ  D             T  +S  +                PAAFKNFSK
Sbjct: 121 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 180

Query: 181 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240
           SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS
Sbjct: 181 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240

Query: 241 SEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 300
           +EVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH
Sbjct: 241 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 300

Query: 301 KRKKSRLNVDIDLGPNEDNTAEASQPPPTRRTTRNSACQR 311
           KRKKSRLNVDIDLGPNED+TAEASQPPPTRRTTR+SA QR
Sbjct: 301 KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 340

[Close]

BLAST of Chy5G090820 vs. NCBI nr
Match: KAE8649414.1 (hypothetical protein Csa_021680 [Cucumis sativus])

HSP 1 Score: 569 bits (1466), Expect = 1.12e-201
Identity = 294/340 (86.47%), Postives = 300/340 (88.24%), Query Frame = 0


Query: 1   MSELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQSLLS GPLREDQFHLLFK+ITGKTPDNDQQVFNSYLLTINKALSFAQ
Sbjct: 97  MPELSWRHHTLIQSLLSRGPLREDQFHLLFKQITGKTPDNDQQVFNSYLLTINKALSFAQ 156

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIA FKAIVEAIAQD SAQGGISN
Sbjct: 157 FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIALFKAIVEAIAQDSSAQGGISN 216

Query: 121 ISALNLQLENQLGD-------------TGSQSQVI----------------PAAFKNFSK 180
           ISALNLQLENQ  D             T  +S  +                PAAFKNFSK
Sbjct: 217 ISALNLQLENQAFDLPNFTIVGKVEKRTSKRSSPLLLYQSGGYRIPVPSHMPAAFKNFSK 276

Query: 181 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 240
           SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS
Sbjct: 277 SHKEKTIAELAQDKWLDCTPDGFVNLGVRSFLDLRSWFRSNDVPSCEVCNEAGVKAELCS 336

Query: 241 SEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 300
           +EVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH
Sbjct: 337 TEVCTVRVHQYCLKKMLSNKKSKKACPGCGTRWQSTTSNIEPKEEEDEPDTRTQDQPSSH 396

Query: 301 KRKKSRLNVDIDLGPNEDNTAEASQPPPTRRTTRNSACQR 311
           KRKKSRLNVDIDLGPNED+TAEASQPPPTRRTTR+SA QR
Sbjct: 397 KRKKSRLNVDIDLGPNEDSTAEASQPPPTRRTTRSSARQR 436

[Close]

BLAST of Chy5G090820 vs. NCBI nr
Match: XP_038900599.1 (non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 550 bits (1417), Expect = 3.44e-196
Identity = 273/308 (88.64%), Postives = 289/308 (93.83%), Query Frame = 0


Query: 1   MSELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQ+LL+ GPLRED FHLLF RITGKTPDNDQQ+FNSYLLTINKALSFAQ
Sbjct: 1   MPELSWRHHTLIQALLARGPLREDHFHLLFTRITGKTPDNDQQLFNSYLLTINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           ISALNLQLENQ+GDTGSQSQVIPAAFKNFS S KEKTIAELAQDKWL C+PDGFVNLGVR
Sbjct: 121 ISALNLQLENQMGDTGSQSQVIPAAFKNFSISLKEKTIAELAQDKWLSCSPDGFVNLGVR 180

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFRSNDVPSCEVCNEAGVKAELC++E CTVRVH+YCLKKMLSNKKSK+ACPGC
Sbjct: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCNTEDCTVRVHRYCLKKMLSNKKSKRACPGC 240

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDNTAEASQPPPT 300
           G +W+ST SNIE +EEEDEPDT TQDQPSSHKRKKSRLN+DIDLG NED  AEA QPP +
Sbjct: 241 GIQWRSTASNIESREEEDEPDTHTQDQPSSHKRKKSRLNIDIDLGSNEDCMAEAFQPPAS 300

Query: 301 RRTTRNSA 308
           RR TR SA
Sbjct: 301 RRATRRSA 308

[Close]

BLAST of Chy5G090820 vs. NCBI nr
Match: XP_038900598.1 (non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 550 bits (1417), Expect = 7.71e-196
Identity = 273/308 (88.64%), Postives = 289/308 (93.83%), Query Frame = 0


Query: 1   MSELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M ELSWRHHTLIQ+LL+ GPLRED FHLLF RITGKTPDNDQQ+FNSYLLTINKALSFAQ
Sbjct: 23  MPELSWRHHTLIQALLARGPLREDHFHLLFTRITGKTPDNDQQLFNSYLLTINKALSFAQ 82

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSD+QSKLGTKYSVPQIAF+KAIVEAIAQDPSAQGGISN
Sbjct: 83  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 142

Query: 121 ISALNLQLENQLGDTGSQSQVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGVR 180
           ISALNLQLENQ+GDTGSQSQVIPAAFKNFS S KEKTIAELAQDKWL C+PDGFVNLGVR
Sbjct: 143 ISALNLQLENQMGDTGSQSQVIPAAFKNFSISLKEKTIAELAQDKWLSCSPDGFVNLGVR 202

Query: 181 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHQYCLKKMLSNKKSKKACPGC 240
           SFLDLRSWFRSNDVPSCEVCNEAGVKAELC++E CTVRVH+YCLKKMLSNKKSK+ACPGC
Sbjct: 203 SFLDLRSWFRSNDVPSCEVCNEAGVKAELCNTEDCTVRVHRYCLKKMLSNKKSKRACPGC 262

Query: 241 GTRWQSTTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDNTAEASQPPPT 300
           G +W+ST SNIE +EEEDEPDT TQDQPSSHKRKKSRLN+DIDLG NED  AEA QPP +
Sbjct: 263 GIQWRSTASNIESREEEDEPDTHTQDQPSSHKRKKSRLNIDIDLGSNEDCMAEAFQPPAS 322

Query: 301 RRTTRNSA 308
           RR TR SA
Sbjct: 323 RRATRRSA 330

[Close]

BLAST of Chy5G090820 vs. TAIR 10
Match: AT5G21140.1 (embryo defective 1379 )

HSP 1 Score: 331.6 bits (849), Expect = 6.6e-91
Identity = 168/308 (54.55%), Postives = 220/308 (71.43%), Query Frame = 0


Query: 1   MSELSWRHHTLIQSLLSSGPLREDQFHLLFKRITGKTPDNDQQVFNSYLLTINKALSFAQ 60
           M+ LSW+HHTLIQ+L+S GPL+E +FH +F  +TG+ P   +++F+ YLL INK LS+  
Sbjct: 1   MASLSWKHHTLIQALISRGPLKEKEFHSIFTAVTGRNPVTVKKIFDKYLLEINKELSYVH 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDDQSKLGTKYSVPQIAFFKAIVEAIAQDPSAQGGISN 120
           FEL+ CR+QYDG+V YG+VNNV+DDQSKLGTKYSVPQIAFFK I+EAIAQD +AQG IS+
Sbjct: 61  FELKACRDQYDGQVCYGVVNNVADDQSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISS 120

Query: 121 ISALNLQLENQLGDTGSQS-QVIPAAFKNFSKSHKEKTIAELAQDKWLDCTPDGFVNLGV 180
             ALN++LENQ+    S S Q +P AFKNFS + KEKT+ EL +DKWL  T +  + LG+
Sbjct: 121 FDALNIRLENQISSEASSSQQQVPPAFKNFSMTQKEKTLDELVRDKWLCRTRERNIGLGI 180

Query: 181 RSFLDLRSWFRSNDVPSCEVCNEAGVKAELCSSEVCTVRVHQYCLKKMLSNKKSKKACPG 240
           RS LDLRSWFR+NDVPSCEVCNEAGVKA+LC +E C VR+H+YCLKK+LS +  K+ C G
Sbjct: 181 RSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPTEGCPVRIHKYCLKKLLSQRDDKR-CSG 240

Query: 241 CGTRWQ-STTSNIEPKEEEDEPDTRTQDQPSSHKRKKSRLNVDIDLGPNEDNTAEASQPP 300
           CG  W  S  +  E  EE    +  ++ Q ++ K K+ R   D     +   +  ++   
Sbjct: 241 CGKPWPLSKITKTEAAEEAMNDEEESETQATAPKAKRRRQQRDSTENGSSQASLASTSGA 300

Query: 301 PTRRTTRN 307
            TRR TR+
Sbjct: 301 NTRRVTRS 307

The following BLAST results are available for this feature:

BLAST of Chy5G090820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PAF4	3.9e-11	26.32	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX...	[more]
Q6P881	1.1e-08	22.94	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicali...	[more]

BLAST of Chy5G090820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ19	1.5e-170	97.11	Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis sativus O...	[more]
A0A1S3BMD8	1.7e-166	95.19	Non-structural maintenance of chromosomes element 1 homolog OS=Cucumis melo OX=3...	[more]
A0A6J1JYV1	1.4e-144	83.12	Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ...	[more]
A0A6J1K5P2	1.4e-144	83.12	Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ...	[more]
A0A6J1DI86	3.1e-144	83.39	Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant...	[more]

BLAST of Chy5G090820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008449859.1	2.50e-212	95.19	PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Cucumis ...	[more]
XP_031740711.1	3.42e-203	86.47	non-structural maintenance of chromosomes element 1 homolog [Cucumis sativus] >X...	[more]
KAE8649414.1	1.12e-201	86.47	hypothetical protein Csa_021680 [Cucumis sativus]	[more]
XP_038900599.1	3.44e-196	88.64	non-structural maintenance of chromosomes element 1 homolog isoform X2 [Benincas...	[more]
XP_038900598.1	7.71e-196	88.64	non-structural maintenance of chromosomes element 1 homolog isoform X1 [Benincas...	[more]

BLAST of Chy5G090820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21140.1	6.6e-91	54.55	embryo defective 1379	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014857	Zinc finger, RING-like	PFAM	PF08746	zf-RING-like	coord: 197..240 e-value: 4.5E-8 score: 33.3
IPR014857	Zinc finger, RING-like	CDD	cd16493	RING-CH-C4HC3_NSE1	coord: 196..242 e-value: 6.12131E-12 score: 57.8249
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 195..254 e-value: 7.9E-11 score: 43.3
IPR011513	Non-structural maintenance of chromosomes element 1	PFAM	PF07574	SMC_Nse1	coord: 8..185 e-value: 8.6E-43 score: 146.5
IPR011513	Non-structural maintenance of chromosomes element 1	PANTHER	PTHR20973	NON-SMC ELEMENT 1-RELATED	coord: 1..305
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 84..193 e-value: 6.4E-20 score: 73.1
None	No IPR available	GENE3D	3.90.1150.220		coord: 5..81 e-value: 4.4E-13 score: 51.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..282
None	No IPR available	PANTHER	PTHR20973:SF1	BNAANNG27900D PROTEIN	coord: 1..305

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy5G090820.1	Chy5G090820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006301	postreplication repair
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030915	Smc5-Smc6 complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity