
Chy4G089370 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTCTTCGGGTGTTCGAGCTTTTGTTTTGTTGGCATTTTGCTGCCTTCTTCCTGGTTTGGCAGAGTCCACAGTTCGCCATTACAAATTCAATGTGAGTTTCTTTAACTCTCTGAAAAAATGTTAGTTGTATATGTTTCTTTATTAAACAAATGTTAAAAGGGGAAAAAAAAAACAAAGGATTTCCAATAATAGGCTACTTTTGGTGTGTCGTAGCTAGCTTTCCTTTTCTTTAGAAAGAGAGCTTTTGAATGACTTATTACTTTTATGGCTTGGACCACCGAATCCATTATTGGTTTGGTTTGATTTTAATGAGTGATATTGATCTATATTCGTTGGCAGGTGGTGTTGAGAAAAGCAACCAGACTTTGCTCAAGCAAGCCCATTGTCACCGTCAATGGACAGTTCCCTGGTCCAACCGTTTACGCTAGGGAGGGCGACAATGTGCTTATCAAAGTTGTCAACCATGTCAAATATAATCTTTCCATTCACTGGTAA ATGGGGTCTTCGGGTGTTCGAGCTTTTGTTTTGTTGGCATTTTGCTGCCTTCTTCCTGGTTTGGCAGAGTCCACAGTTCGCCATTACAAATTCAATGTGGTGTTGAGAAAAGCAACCAGACTTTGCTCAAGCAAGCCCATTGTCACCGTCAATGGACAGTTCCCTGGTCCAACCGTTTACGCTAGGGAGGGCGACAATGTGCTTATCAAAGTTGTCAACCATGTCAAATATAATCTTTCCATTCACTGGTAA ATGGGGTCTTCGGGTGTTCGAGCTTTTGTTTTGTTGGCATTTTGCTGCCTTCTTCCTGGTTTGGCAGAGTCCACAGTTCGCCATTACAAATTCAATGTGGTGTTGAGAAAAGCAACCAGACTTTGCTCAAGCAAGCCCATTGTCACCGTCAATGGACAGTTCCCTGGTCCAACCGTTTACGCTAGGGAGGGCGACAATGTGCTTATCAAAGTTGTCAACCATGTCAAATATAATCTTTCCATTCACTGGTAA MGSSGVRAFVLLAFCCLLPGLAESTVRHYKFNVVLRKATRLCSSKPIVTVNGQFPGPTVYAREGDNVLIKVVNHVKYNLSIHW* Homology
BLAST of Chy4G089370 vs. ExPASy Swiss-Prot
Match: O80434 (Laccase-4 OS=Arabidopsis thaliana OX=3702 GN=IRX12 PE=2 SV=2) HSP 1 Score: 120.6 bits (301), Expect = 8.8e-27 Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of Chy4G089370 vs. ExPASy Swiss-Prot
Match: Q0IQU1 (Laccase-22 OS=Oryza sativa subsp. japonica OX=39947 GN=LAC22 PE=2 SV=2) HSP 1 Score: 115.2 bits (287), Expect = 3.7e-25 Identity = 52/77 (67.53%), Postives = 65/77 (84.42%), Query Frame = 0
BLAST of Chy4G089370 vs. ExPASy Swiss-Prot
Match: Q1PDH6 (Laccase-16 OS=Arabidopsis thaliana OX=3702 GN=LAC16 PE=2 SV=2) HSP 1 Score: 109.8 bits (273), Expect = 1.5e-23 Identity = 50/70 (71.43%), Postives = 56/70 (80.00%), Query Frame = 0
BLAST of Chy4G089370 vs. ExPASy Swiss-Prot
Match: Q6ID18 (Laccase-10 OS=Arabidopsis thaliana OX=3702 GN=LAC10 PE=2 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.6e-20 Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of Chy4G089370 vs. ExPASy Swiss-Prot
Match: Q8VZA1 (Laccase-11 OS=Arabidopsis thaliana OX=3702 GN=LAC11 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 3.6e-20 Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of Chy4G089370 vs. ExPASy TrEMBL
Match: A0A5D3DMZ0 (Laccase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001020 PE=3 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 3.2e-40 Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Chy4G089370 vs. ExPASy TrEMBL
Match: A0A1S3B5Q7 (Laccase OS=Cucumis melo OX=3656 GN=LOC103486322 PE=3 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 3.2e-40 Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Chy4G089370 vs. ExPASy TrEMBL
Match: A0A0A0LFD8 (Laccase OS=Cucumis sativus OX=3659 GN=Csa_3G732490 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.2e-39 Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of Chy4G089370 vs. ExPASy TrEMBL
Match: A0A6J1F1N9 (Laccase OS=Cucurbita moschata OX=3662 GN=LOC111441394 PE=3 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.4e-35 Identity = 74/83 (89.16%), Postives = 78/83 (93.98%), Query Frame = 0
BLAST of Chy4G089370 vs. ExPASy TrEMBL
Match: A0A6J1CWL9 (Laccase OS=Momordica charantia OX=3673 GN=LOC111015070 PE=3 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.3e-33 Identity = 72/83 (86.75%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of Chy4G089370 vs. NCBI nr
Match: XP_008442464.2 (PREDICTED: LOW QUALITY PROTEIN: laccase-4-like [Cucumis melo]) HSP 1 Score: 173 bits (438), Expect = 3.53e-49 Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Chy4G089370 vs. NCBI nr
Match: KAA0044152.1 (laccase-4-like [Cucumis melo var. makuwa] >TYK24985.1 laccase-4-like [Cucumis melo var. makuwa]) HSP 1 Score: 173 bits (438), Expect = 3.53e-49 Identity = 82/83 (98.80%), Postives = 83/83 (100.00%), Query Frame = 0
BLAST of Chy4G089370 vs. NCBI nr
Match: XP_004137913.1 (laccase-4 [Cucumis sativus] >KGN58791.1 hypothetical protein Csa_000766 [Cucumis sativus]) HSP 1 Score: 171 bits (433), Expect = 1.89e-48 Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 0
BLAST of Chy4G089370 vs. NCBI nr
Match: KAG7017242.1 (Laccase-4, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 157 bits (396), Expect = 5.40e-48 Identity = 74/83 (89.16%), Postives = 78/83 (93.98%), Query Frame = 0
BLAST of Chy4G089370 vs. NCBI nr
Match: XP_038904173.1 (laccase-4-like [Benincasa hispida]) HSP 1 Score: 164 bits (416), Expect = 7.93e-46 Identity = 78/83 (93.98%), Postives = 80/83 (96.39%), Query Frame = 0
BLAST of Chy4G089370 vs. TAIR 10
Match: AT2G38080.1 (Laccase/Diphenol oxidase family protein ) HSP 1 Score: 120.6 bits (301), Expect = 6.2e-28 Identity = 55/83 (66.27%), Postives = 66/83 (79.52%), Query Frame = 0
BLAST of Chy4G089370 vs. TAIR 10
Match: AT5G01190.1 (laccase 10 ) HSP 1 Score: 99.8 bits (247), Expect = 1.1e-21 Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = 0
BLAST of Chy4G089370 vs. TAIR 10
Match: AT5G03260.1 (laccase 11 ) HSP 1 Score: 98.6 bits (244), Expect = 2.5e-21 Identity = 44/77 (57.14%), Postives = 58/77 (75.32%), Query Frame = 0
BLAST of Chy4G089370 vs. TAIR 10
Match: AT5G58910.1 (laccase 16 ) HSP 1 Score: 92.4 bits (228), Expect = 1.8e-19 Identity = 39/49 (79.59%), Postives = 44/49 (89.80%), Query Frame = 0
BLAST of Chy4G089370 vs. TAIR 10
Match: AT2G29130.1 (laccase 2 ) HSP 1 Score: 90.9 bits (224), Expect = 5.3e-19 Identity = 41/73 (56.16%), Postives = 51/73 (69.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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