Chy4G089230 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTCTTTAGAGGCAATGGCCAAAGGAAGTGATGGCAGGTACTTGGGGGATATTGCAACCCTTAAGATAGCCCGGGGGGTTGTTGGAGCAGTTGTCGAAAAGGGTGTAGTCTTCAAATTCATACTCTATACCATGCAAGCAGTCAAGCAAGGGTTCCAGGATATTGGTTCTTCTCCACTTTGTGCTTTGTTGGTTATGAACATGAATTTGTTTGGAATCGTTGTCATTTTATTGGGTTTACACATGTACAGGTTCGTACAGAGGCAGCACACAGGTCGAAGGTGGAATTCATGGATGGGTCTCTTATGAAAAGAGATCGTTTTGAAAAATAAATACATTATGACTATAAGCTGCTCCTTAAAACTGGACTTGTGTCAATAATTTATATACAGTGATGTGCATATTGTAGTCTTAAGATTTTATCAATTCGAGCTAGCAGTGGATTTTTTTTTCTCTCTCTCCTCTTCTACATATAATGTAACAACACGGTCTATGCCTTCAAAACAGAATATTGGGAAGAAAGTTGTAACAAATTGTGA ATGGGGTCTTTAGAGGCAATGGCCAAAGGAAGTGATGGCAGGTACTTGGGGGATATTGCAACCCTTAAGATAGCCCGGGGGGTTGTTGGAGCAGTTGTCGAAAAGGGTGTAGTCTTCAAATTCATACTCTATACCATGCAAGCAGTCAAGCAAGGGTTCCAGGATATTGGTTCTTCTCCACTTTGTGCTTTGTTGGTTATGAACATGAATTTGTTTGGAATCGTTGTCATTTTATTGGGTTTACACATGTACAGGTTCGTACAGAGGCAGCACACAGGTCGAAGGTGGAATTCATGGATGGTCTTAAGATTTTATCAATTCGAGCTAGCAGTGGATTTTTTTTTCTCTCTCTCCTCTTCTACATATAATGTAACAACACGGTCTATGCCTTCAAAACAGAATATTGGGAAGAAAGTTGTAACAAATTGTGA ATGGGGTCTTTAGAGGCAATGGCCAAAGGAAGTGATGGCAGGTACTTGGGGGATATTGCAACCCTTAAGATAGCCCGGGGGGTTGTTGGAGCAGTTGTCGAAAAGGGTGTAGTCTTCAAATTCATACTCTATACCATGCAAGCAGTCAAGCAAGGGTTCCAGGATATTGGTTCTTCTCCACTTTGTGCTTTGTTGGTTATGAACATGAATTTGTTTGGAATCGTTGTCATTTTATTGGGTTTACACATGTACAGGTTCGTACAGAGGCAGCACACAGGTCGAAGGTGGAATTCATGGATGGTCTTAAGATTTTATCAATTCGAGCTAGCAGTGGATTTTTTTTTCTCTCTCTCCTCTTCTACATATAATGTAACAACACGGTCTATGCCTTCAAAACAGAATATTGGGAAGAAAGTTGTAACAAATTGTGA MGSLEAMAKGSDGRYLGDIATLKIARGVVGAVVEKGVVFKFILYTMQAVKQGFQDIGSSPLCALLVMNMNLFGIVVILLGLHMYRFVQRQHTGRRWNSWMVLRFYQFELAVDFFFSLSSSTYNVTTRSMPSKQNIGKKVVTNCX Homology
BLAST of Chy4G089230 vs. ExPASy Swiss-Prot
Match: Q9SA34 (Inosine-5'-monophosphate dehydrogenase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g16350 PE=1 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 4.4e-18 Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of Chy4G089230 vs. ExPASy Swiss-Prot
Match: Q84XA3 (Inosine-5'-monophosphate dehydrogenase OS=Vigna unguiculata OX=3917 GN=impdh PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.3e-17 Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of Chy4G089230 vs. ExPASy Swiss-Prot
Match: P47996 (Inosine-5'-monophosphate dehydrogenase 1 OS=Arabidopsis thaliana OX=3702 GN=IMPDH PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16 Identity = 45/61 (73.77%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of Chy4G089230 vs. ExPASy Swiss-Prot
Match: Q54QQ0 (Inosine-5'-monophosphate dehydrogenase OS=Dictyostelium discoideum OX=44689 GN=impdh PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.5e-10 Identity = 32/64 (50.00%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of Chy4G089230 vs. ExPASy Swiss-Prot
Match: B0UXP9 (Inosine-5'-monophosphate dehydrogenase 2 OS=Danio rerio OX=7955 GN=impdh2 PE=3 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.0e-06 Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of Chy4G089230 vs. ExPASy TrEMBL
Match: A0A0A0LAC3 (IMPDH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G732640 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 3.3e-32 Identity = 87/144 (60.42%), Postives = 104/144 (72.22%), Query Frame = 0
BLAST of Chy4G089230 vs. ExPASy TrEMBL
Match: A0A6J1HZF2 (Inosine-5'-monophosphate dehydrogenase OS=Cucurbita maxima OX=3661 GN=LOC111468080 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 8.6e-17 Identity = 48/61 (78.69%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of Chy4G089230 vs. ExPASy TrEMBL
Match: A0A6J1D3Y1 (Inosine-5'-monophosphate dehydrogenase OS=Momordica charantia OX=3673 GN=LOC111016759 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 8.6e-17 Identity = 48/61 (78.69%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of Chy4G089230 vs. ExPASy TrEMBL
Match: A0A6J1GLR9 (Inosine-5'-monophosphate dehydrogenase OS=Cucurbita moschata OX=3662 GN=LOC111455460 PE=3 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 8.6e-17 Identity = 48/61 (78.69%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of Chy4G089230 vs. ExPASy TrEMBL
Match: A0A5D3BCR0 (Inosine-5'-monophosphate dehydrogenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00390 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 1.1e-16 Identity = 48/61 (78.69%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of Chy4G089230 vs. NCBI nr
Match: KGN58808.1 (hypothetical protein Csa_001721 [Cucumis sativus]) HSP 1 Score: 146 bits (368), Expect = 7.40e-42 Identity = 87/144 (60.42%), Postives = 104/144 (72.22%), Query Frame = 0
BLAST of Chy4G089230 vs. NCBI nr
Match: XP_021804122.1 (inosine-5'-monophosphate dehydrogenase 2-like, partial [Prunus avium]) HSP 1 Score: 92.8 bits (229), Expect = 4.34e-21 Identity = 48/61 (78.69%), Postives = 52/61 (85.25%), Query Frame = 0
BLAST of Chy4G089230 vs. NCBI nr
Match: XP_019242259.1 (PREDICTED: inosine-5'-monophosphate dehydrogenase-like [Nicotiana attenuata] >OIT18750.1 inosine-5'-monophosphate dehydrogenase [Nicotiana attenuata]) HSP 1 Score: 92.0 bits (227), Expect = 4.36e-21 Identity = 46/61 (75.41%), Postives = 52/61 (85.25%), Query Frame = 0
BLAST of Chy4G089230 vs. NCBI nr
Match: TQD90936.1 (hypothetical protein C1H46_023539 [Malus baccata]) HSP 1 Score: 91.7 bits (226), Expect = 6.17e-21 Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = 0
BLAST of Chy4G089230 vs. NCBI nr
Match: RXH86657.1 (hypothetical protein DVH24_021930 [Malus domestica]) HSP 1 Score: 90.9 bits (224), Expect = 7.95e-21 Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of Chy4G089230 vs. TAIR 10
Match: AT1G16350.1 (Aldolase-type TIM barrel family protein ) HSP 1 Score: 92.4 bits (228), Expect = 3.1e-19 Identity = 47/61 (77.05%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of Chy4G089230 vs. TAIR 10
Match: AT1G79470.1 (Aldolase-type TIM barrel family protein ) HSP 1 Score: 87.8 bits (216), Expect = 7.7e-18 Identity = 45/61 (73.77%), Postives = 49/61 (80.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|