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Chy4G088950 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGTCTAATTCCATTTGTTTACAAAGCTATTGTTCAATACAAGAACGAAAAACAAGTACCCGCCATCCGATCTTGGCTTTGCGATTCCCCTTCCACGTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAACTCCAATCCGACGCCTCTCCTTCTTCAAAATCACCTACCTCTTCCACCACCCAGATTCTGGTTTCTACCGGAGTTCAATCGCCACTTCGCCATCTGACAACTCGACGGGTTGCTGCCTAA ATGGAAGGTCTAATTCCATTTGTTTACAAAGCTATTGTTCAATACAAGAACGAAAAACAAGTACCCGCCATCCGATCTTGGCTTTGCGATTCCCCTTCCACGTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAACTCCAATCCGACGCCTCTCCTTCTTCAAAATCACCTACCTCTTCCACCACCCAGATTCTGGTTTCTACCGGAGTTCAATCGCCACTTCGCCATCTGACAACTCGACGGGTTGCTGCCTAA ATGGAAGGTCTAATTCCATTTGTTTACAAAGCTATTGTTCAATACAAGAACGAAAAACAAGTACCCGCCATCCGATCTTGGCTTTGCGATTCCCCTTCCACGTCCTACATCAGACTTCCCAGTGGTGATTCCGGCCGATTTCAACTCCAATCCGACGCCTCTCCTTCTTCAAAATCACCTACCTCTTCCACCACCCAGATTCTGGTTTCTACCGGAGTTCAATCGCCACTTCGCCATCTGACAACTCGACGGGTTGCTGCCTAA MEGLIPFVYKAIVQYKNEKQVPAIRSWLCDSPSTSYIRLPSGDSGRFQLQSDASPSSKSPTSSTTQILVSTGVQSPLRHLTTRRVAA* Homology
BLAST of Chy4G088950 vs. ExPASy TrEMBL
Match: A0A0A0LD26 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G733930 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.1e-37 Identity = 86/88 (97.73%), Postives = 86/88 (97.73%), Query Frame = 0
BLAST of Chy4G088950 vs. ExPASy TrEMBL
Match: A0A5D3DNC7 (Legume-specific protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001410 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 2.7e-37 Identity = 86/89 (96.63%), Postives = 86/89 (96.63%), Query Frame = 0
BLAST of Chy4G088950 vs. ExPASy TrEMBL
Match: K7MT87 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_18G187300 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.7e-21 Identity = 62/94 (65.96%), Postives = 74/94 (78.72%), Query Frame = 0
BLAST of Chy4G088950 vs. ExPASy TrEMBL
Match: A0A0B2P904 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_048924 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.7e-20 Identity = 61/94 (64.89%), Postives = 73/94 (77.66%), Query Frame = 0
BLAST of Chy4G088950 vs. ExPASy TrEMBL
Match: A0A0L9U5Z2 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan03g145400 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 8.7e-20 Identity = 59/92 (64.13%), Postives = 71/92 (77.17%), Query Frame = 0
BLAST of Chy4G088950 vs. NCBI nr
Match: KAA0044116.1 (legume-specific protein [Cucumis melo var. makuwa] >TYK25022.1 legume-specific protein [Cucumis melo var. makuwa]) HSP 1 Score: 162 bits (411), Expect = 3.92e-50 Identity = 86/89 (96.63%), Postives = 86/89 (96.63%), Query Frame = 0
BLAST of Chy4G088950 vs. NCBI nr
Match: KAE8650999.1 (hypothetical protein Csa_002313 [Cucumis sativus]) HSP 1 Score: 159 bits (402), Expect = 2.38e-47 Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 0
BLAST of Chy4G088950 vs. NCBI nr
Match: KAG7017269.1 (hypothetical protein SDJN02_19132, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147 bits (371), Expect = 4.97e-44 Identity = 78/89 (87.64%), Postives = 82/89 (92.13%), Query Frame = 0
BLAST of Chy4G088950 vs. NCBI nr
Match: KAG6580521.1 (hypothetical protein SDJN03_20523, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 145 bits (367), Expect = 2.02e-43 Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 0
BLAST of Chy4G088950 vs. NCBI nr
Match: KAG6596392.1 (hypothetical protein SDJN03_09572, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 122 bits (306), Expect = 4.30e-34 Identity = 67/91 (73.63%), Postives = 73/91 (80.22%), Query Frame = 0
BLAST of Chy4G088950 vs. TAIR 10
Match: AT2G37750.1 (unknown protein; Has 21 Blast hits to 21 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 2.4e-06 Identity = 39/87 (44.83%), Postives = 49/87 (56.32%), Query Frame = 0
BLAST of Chy4G088950 vs. TAIR 10
Match: AT5G02090.1 (unknown protein; Has 30 Blast hits to 30 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 1.3e-04 Identity = 32/85 (37.65%), Postives = 40/85 (47.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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