Chy4G088870 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGATCTGAGCTTGATTCCCGTGGGTTACATCTTTTGTCCCACGGAGGAAGAACTGTTGGGTTACTATCTCTACAGCAAAGTTTTGGGAGGACAAGCTCCTCCACTTGTGTTTCCGGTGATCGATCTTTACACCCAAGAACCCTCTCAAATATGGCAACAATGTAGAGGGGTTGATAACCAAGATATCTATTTCTTCACCACTCTCCAAAAAAAGAAATCTCGAATCATTCGAAAGGTTGGTTCTAATGGTGGCACTTGGAGTGGTGAGAACAAACCTCAACAAGTGTTTTCTTCAATTATTGATAATCTCCTCCTTGGCACTATGAAACGATTTCGATATGAGAAATCTCAAGTAAAAGAGGATTGTACATGGATTATGTATGAGTATACCCTCAATCCATCTATCGTACCAGAAGGGTTGGTGCATGATTCCTATGTGCTTTGTACGATTCGAAAAAAGATAGTCAAATCAGAAAAAATGGTCATGACCTCAAACAAAAGACGAGCATCAAATAATAATTGGCCAATGACAACTATGCATGTAGATAATTAGAACAACAAACGCATGAAACTACAAGAGGAAGCTGTGGTTGACTCACATAAAGAATGTTGCATAGATGCTACTATTGGATGGTATGTACAATTTTAGGAAATTTTGATCGTTAAAAGTTATTCTTTATTATATTTTGTTCATGCCTAGCTAACAAGTATACGTTAATTTTGTTGATGCATTTTTTTCATAATGCATGTTCTTAAATTAACATTTTTTTTTATTTTTCTCATAGTCCAACAACACAAATGGATCATGTTTTCAAGATTTGTCAAATGGTTACTTACTATTTGCAAACGAGATTGAGGATGGAATTGAACCATGCAACAACGTGGAACTACCAAACGTTGAAGATGATTTGAATTATGATAATGAGTGGTATTTCAGACTATGATCACCAACTACATTGTAGATATGTATTCCATACATACATGTGAGGTTGAACCCCTTCAAATTAATAATTGTTATTATTTACACCCAGTATGTTCTTAATCACTGTCAACATTTTTTTACTTCAATTAATCATGATGATATGAACCGACCAAACATTATATTATTAATCAGATTTTAATTCAATAACTATGACGTAATTTTAATATTTTTTTCCAACCTTTTCACAATGCCTTGAGATTTTAGTGAGAGGTTATTTAAGTCCTAGTTTGTAGGTCTTTTAAGAAAGTTTTATACAATTGAAGTTTAGACTTTTCTTTTGATAGAAATTGAGTCTTATTGCCATCTTTTTGCAATTCTTGATTCAGGTTGGCATGTCAAGAACATTTAGCTAAGTTTGATCACCTTGCTGGTGGAGTATTTGAACATGGGGTGAGGAAAACTAGTTCTCTTTGTAATTCAAATCTAACTCATTTTCTTGGTTGTTTTCAAACTGATTTAAGGTTTTAGAATTTGATATTAGGGGTTCACTAATTGAATTCAAAATTCTGCATATTTGGTCGCTTGGTTTTTGGCATCACATCACCATTCAACGTGGAGCATGTCAAATCAATTCGTTTTCTTTTTCTATTTTATCTTAGTGTATATGACATGTACTGGAAGTCTGTTTATTATAGTTCAGAAAGCACATATGTAAATGACTATGACAATGTATGTTACAATTTTATATTCAATATATTTGTTAGGGATAAGTTAGACTAGGGTGCTAAGGATTGTGCCAATTTGATTGGGATGTCTGGGTGCACCTAATTTCTTATCACCAATAATTAATTTTGGTACAAATAATTAGTTTTTATTTTATGTTGCATATGTAATCCACATCCTTTCGTTACATTGTGAAAGCAGATGAATGTTGAATTTGGATTTCTTAATTTATGGTCTAAGAGCAACATATGGTAGGATATCAGTACTTCCAAATTATTTTTTCATGTATTTCATTTCTATATGTTATTATTTTTGTATTCTATTTGTGATTAATCTGTGTGTTTAAACAATTGATAACATTTTTTTTAATATAATCTTTAGAAAATAAAACAAGATATAATTTCATAATTAAAGGTATATCAAATAGAAATTAGTGAGTTCAACTTTTCATGGAGTACTTACAAATTGACTTAAAACGTTATTCTTCTATAGGATGATCATAATGTGCAGTTCAAAATTGCATGTCTAGTCTCCATCTTACCAATATCTTTGCCCCCAACACCTATAGTTATCATAGAGTTACAAATGGCCCTAGAAAAGGTATGGTATAGGTATACGTTTTTGCCATTAGGTTAATTTGTCACATGCTCCTCCCATTCCAAAGTCTACACCAATTAATAGTTTCTCGGCTTCAACTATCTTCAAATTTCATAGGGTTTTAAGTCTCCTCCAATTCCAAAGTCTGCACCAAATAATTATACACGTTCTTTCCATCCATGGGTTCTTTCAATTTTATAATATTTTTCATTTGTCATTACTTTCTATATGCCATTAGAATCCTCAAGCTGCTCTTTATCCTCACTTAGACAATACCACTGATAAGGAAGTTCTGTTTTCATTCAAATCTTCACTCATTGACCACCCACATGGCGTCTTTGGATTCTTGGCATCCAAACACTTATTCCTTCTGCAAGTGGCATGGAGTCCTCTTCAATTTTGTCAAGCGTTGTGTCATCGGTCTCCAACTTGGAAATTACTCACTCATTGGACCAATTTCTCCTCACCTCACCGTCAGCAACCTTTCATTTCTTTGCATTCTTGAGCTGCAGAGCAACAACTTCTCTACGAGAATTCCAGTGGAGATTGATCGTCTTTTTCGATTAGAGTCTTGAACTTGAGTTCCAACGGTCTTCATGGAACCATTCCGCCATCTTTGAGTCGATGTTTGAGGCTTCGTGTCATTGATGTTTATGAGAATGAACTTCATGGTAGAATTCCATTTGACTTGGGTAGCTCTAGCTTATCACTTATCAGAATATGA ATGATGGATCTGAGCTTGATTCCCGTGGGTTACATCTTTTGTCCCACGGAGGAAGAACTGTTGGGTTACTATCTCTACAGCAAAGTTTTGGGAGGACAAGCTCCTCCACTTGTGTTTCCGGTGATCGATCTTTACACCCAAGAACCCTCTCAAATATGGCAACAATGTAGAGGGGTTGATAACCAAGATATCTATTTCTTCACCACTCTCCAAAAAAAGAAATCTCGAATCATTCGAAAGGTTGGTTCTAATGGTGGCACTTGGAGTGGTGAGAACAAACCTCAACAAGTGTTTTCTTCAATTATTGATAATCTCCTCCTTGGCACTATGAAACGATTTCGATATGAGAAATCTCAAGTAAAAGAGGATTGTACATGGATTATGTATGAGTATACCCTCAATCCATCTATCGTACCAGAAGGGTTGGTGCATGATTCCTATGTGCTTTGTACGATTCGAAAAAAGATAGTCAAATCAGAAAAAATGGTCATGACCTCAAACAAAAGACGAGCATCAAATAATAATTGGCCAATGACAACTATGCATTCCAACAACACAAATGGATCATGTTTTCAAGATTTGTCAAATGGTTACTTACTATTTGCAAACGAGATTGAGGATGGAATTGAACCATGCAACAACGTGGAACTACCAAACGTTGAAGATGATTTGAATTATGATAATGAGTGTGTATATGACATGTACTGGAAGTCTGTTTATTATAGTTCAGAAAGCACATATGTAAATGACTATGACAATGATGATCATAATGTGCAGTTCAAAATTGCATGTCTAGTCTCCATCTTACCAATATCTTTGCCCCCAACACCTATAGTTATCATAGAGTTACAAATGGCCCTAGAAAAGAATCCTCAAGCTGCTCTTTATCCTCACTTAGACAATACCACTGATAAGGAAGTTCTGTTTTCATTCAAATCTTCACTCATTGACCACCCACATGGCGTCTTTGGATTCTTGGCATCCAAACACTTATTCCTTCTGCAAGTGGCATGGAGTCCTCTTCAATTTTGTCAAGCGTTAGTCTTGAACTTGAGTTCCAACGGTCTTCATGGAACCATTCCGCCATCTTTGAGTCGATGTTTGAGGCTTCGTGTCATTGATGTTTATGAGAATGAACTTCATGGTAGAATTCCATTTGACTTGGGTAGCTCTAGCTTATCACTTATCAGAATATGA ATGATGGATCTGAGCTTGATTCCCGTGGGTTACATCTTTTGTCCCACGGAGGAAGAACTGTTGGGTTACTATCTCTACAGCAAAGTTTTGGGAGGACAAGCTCCTCCACTTGTGTTTCCGGTGATCGATCTTTACACCCAAGAACCCTCTCAAATATGGCAACAATGTAGAGGGGTTGATAACCAAGATATCTATTTCTTCACCACTCTCCAAAAAAAGAAATCTCGAATCATTCGAAAGGTTGGTTCTAATGGTGGCACTTGGAGTGGTGAGAACAAACCTCAACAAGTGTTTTCTTCAATTATTGATAATCTCCTCCTTGGCACTATGAAACGATTTCGATATGAGAAATCTCAAGTAAAAGAGGATTGTACATGGATTATGTATGAGTATACCCTCAATCCATCTATCGTACCAGAAGGGTTGGTGCATGATTCCTATGTGCTTTGTACGATTCGAAAAAAGATAGTCAAATCAGAAAAAATGGTCATGACCTCAAACAAAAGACGAGCATCAAATAATAATTGGCCAATGACAACTATGCATTCCAACAACACAAATGGATCATGTTTTCAAGATTTGTCAAATGGTTACTTACTATTTGCAAACGAGATTGAGGATGGAATTGAACCATGCAACAACGTGGAACTACCAAACGTTGAAGATGATTTGAATTATGATAATGAGTGTGTATATGACATGTACTGGAAGTCTGTTTATTATAGTTCAGAAAGCACATATGTAAATGACTATGACAATGATGATCATAATGTGCAGTTCAAAATTGCATGTCTAGTCTCCATCTTACCAATATCTTTGCCCCCAACACCTATAGTTATCATAGAGTTACAAATGGCCCTAGAAAAGAATCCTCAAGCTGCTCTTTATCCTCACTTAGACAATACCACTGATAAGGAAGTTCTGTTTTCATTCAAATCTTCACTCATTGACCACCCACATGGCGTCTTTGGATTCTTGGCATCCAAACACTTATTCCTTCTGCAAGTGGCATGGAGTCCTCTTCAATTTTGTCAAGCGTTAGTCTTGAACTTGAGTTCCAACGGTCTTCATGGAACCATTCCGCCATCTTTGAGTCGATGTTTGAGGCTTCGTGTCATTGATGTTTATGAGAATGAACTTCATGGTAGAATTCCATTTGACTTGGGTAGCTCTAGCTTATCACTTATCAGAATATGA MMDLSLIPVGYIFCPTEEELLGYYLYSKVLGGQAPPLVFPVIDLYTQEPSQIWQQCRGVDNQDIYFFTTLQKKKSRIIRKVGSNGGTWSGENKPQQVFSSIIDNLLLGTMKRFRYEKSQVKEDCTWIMYEYTLNPSIVPEGLVHDSYVLCTIRKKIVKSEKMVMTSNKRRASNNNWPMTTMHSNNTNGSCFQDLSNGYLLFANEIEDGIEPCNNVELPNVEDDLNYDNECVYDMYWKSVYYSSESTYVNDYDNDDHNVQFKIACLVSILPISLPPTPIVIIELQMALEKNPQAALYPHLDNTTDKEVLFSFKSSLIDHPHGVFGFLASKHLFLLQVAWSPLQFCQALVLNLSSNGLHGTIPPSLSRCLRLRVIDVYENELHGRIPFDLGSSSLSLIRI* Homology
BLAST of Chy4G088870 vs. ExPASy Swiss-Prot
Match: Q9LS24 (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-11 Identity = 51/161 (31.68%), Postives = 82/161 (50.93%), Query Frame = 0
BLAST of Chy4G088870 vs. ExPASy Swiss-Prot
Match: Q9SQY0 (NAC domain containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=NAC052 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.9e-11 Identity = 52/157 (33.12%), Postives = 74/157 (47.13%), Query Frame = 0
BLAST of Chy4G088870 vs. ExPASy Swiss-Prot
Match: Q9C8W9 (NAC domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=NAC030 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.8e-11 Identity = 62/237 (26.16%), Postives = 110/237 (46.41%), Query Frame = 0
BLAST of Chy4G088870 vs. ExPASy Swiss-Prot
Match: Q9FRV4 (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana OX=3702 GN=NAC054 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 4.9e-11 Identity = 51/177 (28.81%), Postives = 84/177 (47.46%), Query Frame = 0
BLAST of Chy4G088870 vs. ExPASy Swiss-Prot
Match: Q9FFI5 (NAC domain-containing protein 86 OS=Arabidopsis thaliana OX=3702 GN=NAC086 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 8.4e-11 Identity = 49/161 (30.43%), Postives = 77/161 (47.83%), Query Frame = 0
BLAST of Chy4G088870 vs. ExPASy TrEMBL
Match: A0A1S3B8F1 (NAC domain-containing protein 105-like OS=Cucumis melo OX=3656 GN=LOC103487127 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 3.2e-77 Identity = 157/262 (59.92%), Postives = 188/262 (71.76%), Query Frame = 0
BLAST of Chy4G088870 vs. ExPASy TrEMBL
Match: A0A5A7TSB0 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001480 PE=4 SV=1) HSP 1 Score: 261.9 bits (668), Expect = 4.3e-66 Identity = 137/229 (59.83%), Postives = 169/229 (73.80%), Query Frame = 0
BLAST of Chy4G088870 vs. ExPASy TrEMBL
Match: A0A5A7UPM7 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G00950 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 1.7e-54 Identity = 103/173 (59.54%), Postives = 135/173 (78.03%), Query Frame = 0
BLAST of Chy4G088870 vs. ExPASy TrEMBL
Match: A0A5D3BHG6 (NAC domain-containing protein 105-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00980 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 1.7e-54 Identity = 103/173 (59.54%), Postives = 135/173 (78.03%), Query Frame = 0
BLAST of Chy4G088870 vs. ExPASy TrEMBL
Match: A0A0A0LWA5 (NAC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G224380 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 6.0e-52 Identity = 100/178 (56.18%), Postives = 135/178 (75.84%), Query Frame = 0
BLAST of Chy4G088870 vs. NCBI nr
Match: KAE8651003.1 (hypothetical protein Csa_002219 [Cucumis sativus]) HSP 1 Score: 436 bits (1121), Expect = 4.41e-148 Identity = 242/381 (63.52%), Postives = 255/381 (66.93%), Query Frame = 0
BLAST of Chy4G088870 vs. NCBI nr
Match: KAE8652623.1 (hypothetical protein Csa_013642 [Cucumis sativus]) HSP 1 Score: 387 bits (995), Expect = 2.92e-130 Identity = 207/326 (63.50%), Postives = 213/326 (65.34%), Query Frame = 0
BLAST of Chy4G088870 vs. NCBI nr
Match: XP_011660358.2 (uncharacterized protein LOC105436381 [Cucumis sativus]) HSP 1 Score: 387 bits (995), Expect = 5.81e-130 Identity = 207/326 (63.50%), Postives = 213/326 (65.34%), Query Frame = 0
BLAST of Chy4G088870 vs. NCBI nr
Match: KGN65836.2 (hypothetical protein Csa_019715 [Cucumis sativus]) HSP 1 Score: 369 bits (948), Expect = 5.45e-123 Identity = 175/186 (94.09%), Postives = 179/186 (96.24%), Query Frame = 0
BLAST of Chy4G088870 vs. NCBI nr
Match: XP_008443570.1 (PREDICTED: NAC domain-containing protein 105-like [Cucumis melo]) HSP 1 Score: 300 bits (768), Expect = 7.26e-96 Identity = 157/262 (59.92%), Postives = 188/262 (71.76%), Query Frame = 0
BLAST of Chy4G088870 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 ) HSP 1 Score: 77.4 bits (189), Expect = 2.9e-14 Identity = 51/193 (26.42%), Postives = 94/193 (48.70%), Query Frame = 0
BLAST of Chy4G088870 vs. TAIR 10
Match: AT2G24430.2 (NAC domain containing protein 38 ) HSP 1 Score: 77.4 bits (189), Expect = 2.9e-14 Identity = 51/193 (26.42%), Postives = 94/193 (48.70%), Query Frame = 0
BLAST of Chy4G088870 vs. TAIR 10
Match: AT1G71930.1 (vascular related NAC-domain protein 7 ) HSP 1 Score: 70.9 bits (172), Expect = 2.7e-12 Identity = 62/237 (26.16%), Postives = 110/237 (46.41%), Query Frame = 0
BLAST of Chy4G088870 vs. TAIR 10
Match: AT3G17730.1 (NAC domain containing protein 57 ) HSP 1 Score: 70.5 bits (171), Expect = 3.5e-12 Identity = 62/227 (27.31%), Postives = 104/227 (45.81%), Query Frame = 0
BLAST of Chy4G088870 vs. TAIR 10
Match: AT5G17260.1 (NAC domain containing protein 86 ) HSP 1 Score: 69.7 bits (169), Expect = 6.0e-12 Identity = 49/161 (30.43%), Postives = 77/161 (47.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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