Chy4G088680 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G088680
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	transcription factor AS1
Location	chrH04: 26682320 .. 26682952 (-)
RNA-Seq Expression	Chy4G088680
Synteny	Chy4G088680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACTTCCAATGGGGGATTTCTTCAAACTGATTCATCCACTCCACCACCATCTCTTCCTCCTTGGCTTTCCAACTCCAACGGTGGCTCTTCGCTCCGACCGCCTTCCCCATCAGTCACCTTAACATTATCTTCCCCCACAGTTCCAGCCTACACTCCCATCCCCTGGTTGCAACAGCCAGACAGAATGCCAGAAAACCTGCCTCTTGTATTAGGCAATTTAGGACCTCAAATGTCAATGCCATCATGTGGTGGTAGCCTCTTTGCTTCTGAGCTCATCGAATGCTGCCGAGAGCTCGACGAAGGCCACCGTGCTTGGGCAGCACACAAGAAGGAAACAGCATGGAGGTTAAGAAGACAAGAGTTGCAATTGGAGTCGGAGAAGGCATCTCGGATTCGACAGAAGATGGAAGAGGTTGAAGGGAAAGTAAAAGCTCTTAGGGAAGAAGAGAAGATTTCTTTGGAAAGGATTGAAGCTGAGTATAAAGAACAATTGGCAGGGTTTAGAAAAGATGCTGAGGCTAAAGAACAAAAGTTGGCTGAGCAATGGGCTGCTAAGCATATGAGCCTTACTAAGTTTCTTGAGCATATGGGATGCAGGACTAGAATTGCTGAGTCAAGTGGGAGGTGA

mRNA sequence

ATGGCCACTTCCAATGGGGGATTTCTTCAAACTGATTCATCCACTCCACCACCATCTCTTCCTCCTTGGCTTTCCAACTCCAACGGTGGCTCTTCGCTCCGACCGCCTTCCCCATCAGTCACCTTAACATTATCTTCCCCCACAGTTCCAGCCTACACTCCCATCCCCTGGTTGCAACAGCCAGACAGAATGCCAGAAAACCTGCCTCTTGTATTAGGCAATTTAGGACCTCAAATGTCAATGCCATCATGTGGTGGTAGCCTCTTTGCTTCTGAGCTCATCGAATGCTGCCGAGAGCTCGACGAAGGCCACCGTGCTTGGGCAGCACACAAGAAGGAAACAGCATGGAGGTTAAGAAGACAAGAGTTGCAATTGGAGTCGGAGAAGGCATCTCGGATTCGACAGAAGATGGAAGAGGTTGAAGGGAAAGTAAAAGCTCTTAGGGAAGAAGAGAAGATTTCTTTGGAAAGGATTGAAGCTGAGTATAAAGAACAATTGGCAGGGTTTAGAAAAGATGCTGAGGCTAAAGAACAAAAGTTGGCTGAGCAATGGGCTGCTAAGCATATGAGCCTTACTAAGTTTCTTGAGCATATGGGATGCAGGACTAGAATTGCTGAGTCAAGTGGGAGGTGA

Coding sequence (CDS)

ATGGCCACTTCCAATGGGGGATTTCTTCAAACTGATTCATCCACTCCACCACCATCTCTTCCTCCTTGGCTTTCCAACTCCAACGGTGGCTCTTCGCTCCGACCGCCTTCCCCATCAGTCACCTTAACATTATCTTCCCCCACAGTTCCAGCCTACACTCCCATCCCCTGGTTGCAACAGCCAGACAGAATGCCAGAAAACCTGCCTCTTGTATTAGGCAATTTAGGACCTCAAATGTCAATGCCATCATGTGGTGGTAGCCTCTTTGCTTCTGAGCTCATCGAATGCTGCCGAGAGCTCGACGAAGGCCACCGTGCTTGGGCAGCACACAAGAAGGAAACAGCATGGAGGTTAAGAAGACAAGAGTTGCAATTGGAGTCGGAGAAGGCATCTCGGATTCGACAGAAGATGGAAGAGGTTGAAGGGAAAGTAAAAGCTCTTAGGGAAGAAGAGAAGATTTCTTTGGAAAGGATTGAAGCTGAGTATAAAGAACAATTGGCAGGGTTTAGAAAAGATGCTGAGGCTAAAGAACAAAAGTTGGCTGAGCAATGGGCTGCTAAGCATATGAGCCTTACTAAGTTTCTTGAGCATATGGGATGCAGGACTAGAATTGCTGAGTCAAGTGGGAGGTGA

Protein sequence

MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQPDRMPENLPLVLGNLGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRRQELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKLAEQWAAKHMSLTKFLEHMGCRTRIAESSGR*

Homology

[Close]

BLAST of Chy4G088680 vs. ExPASy Swiss-Prot
Match: O80931 (Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-57
Identity = 132/214 (61.68%), Postives = 160/214 (74.77%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPS--LPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPA---YTPI 60
           MA SNGGFL ++    PP+  +PPWL+ SN G+++    PSVTLTLS  TV A     PI
Sbjct: 156 MANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPI 215

Query: 61  PWL--QQPDRMPENLP--LVLGNLGPQMSMPSCGG---SLFASELIECCRELDEGHRAWA 120
           PWL  QQP+R  EN P  LVLG++     MPSC G   S+F SEL+ECCREL+EGHRAWA
Sbjct: 216 PWLQQQQPER-AENGPGGLVLGSM-----MPSCSGSSESVFLSELVECCRELEEGHRAWA 275

Query: 121 AHKKETAWRLRRQELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAG 180
            HKKE AWRLRR ELQLESEK  R R+KMEE+E K+KALREE+K ++E+IE EY+EQL G
Sbjct: 276 DHKKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVG 335

Query: 181 FRKDAEAKEQKLAEQWAAKHMSLTKFLE-HMGCR 202
            R+DAEAK+QKLA+QW ++H+ LTKFLE  MGCR
Sbjct: 336 LRRDAEAKDQKLADQWTSRHIRLTKFLEQQMGCR 363

[Close]

BLAST of Chy4G088680 vs. ExPASy Swiss-Prot
Match: Q94IB1 (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 PE=2 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.9e-38
Identity = 96/188 (51.06%), Postives = 125/188 (66.49%), Query Frame = 0


Query: 18  PSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTV---PAYTPIPWLQQPDRMPENLPLVLGN 77
           P LPPW+S+S   SS    SPSVTL+L+S  V   PA  P  W               G 
Sbjct: 163 PILPPWMSSSPSSSS----SPSVTLSLASAAVAPAPAAPPPTW---------------GG 222

Query: 78  LGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRRQELQLESEKASRIR 137
            G        GG +  +EL+ECCRE++EG RAWAAH+KE AWR++R E+QLE+E+A R R
Sbjct: 223 GG--------GGEVVVAELMECCREMEEGQRAWAAHRKEAAWRMKRVEMQLETERACRRR 282

Query: 138 QKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKLAEQWAAKHMSLTKF 197
           +  EE E K++ALREE+  ++ER+EAEY+E++AG R+DAEAKEQK+AEQWAAKH  L KF
Sbjct: 283 EATEEFEAKMRALREEQAAAVERVEAEYREKMAGLRRDAEAKEQKMAEQWAAKHARLAKF 323

Query: 198 LEHM-GCR 202
           L+ +  CR
Sbjct: 343 LDQVAACR 323

[Close]

BLAST of Chy4G088680 vs. ExPASy Swiss-Prot
Match: Q9S7B2 (Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.9e-33
Identity = 89/199 (44.72%), Postives = 121/199 (60.80%), Query Frame = 0


Query: 18  PSLPPWLSNSNGGSSL----------RPPSPSVTLTLSSPTVPAYTPIPWLQQPDRMPEN 77
           P LPPWLS++ G ++           RPPSPSVTL+L+S  V    P P    PDR   +
Sbjct: 160 PVLPPWLSSNAGPAAAAAAAVAHPPPRPPSPSVTLSLASAAVAPGPPAPAPWMPDRAAAD 219

Query: 78  L-------PLVLGNLGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRR 137
                   P   G   P       G +L  +EL ECCREL+EG RAWAAH++E AWRL+R
Sbjct: 220 AAPYGFPSPSQHGGAAPPGMAVVDGQAL--AELAECCRELEEGRRAWAAHRREAAWRLKR 279

Query: 138 QELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKL 197
            E QLE E+  R R+  EE E K++ +R E+  + ER+E +++E++A  R+DA+ KE+K+
Sbjct: 280 VEQQLEMEREMRRREVWEEFEAKMRTMRLEQAAAAERVERDHREKVAELRRDAQVKEEKM 339

Query: 198 AEQWAAKHMSLTKFLEHMG 200
           AEQWAAKH  + KF+E MG
Sbjct: 340 AEQWAAKHARVAKFVEQMG 356

[Close]

BLAST of Chy4G088680 vs. ExPASy TrEMBL
Match: A0A5D3DN74 (Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001650 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.7e-109
Identity = 206/210 (98.10%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PDRMPENLPLVLGNLGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRR 120
           PDRMPEN+PLVLGNL PQMSMPSCGGSLFASEL+ECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEKI+LERIEAEYKEQLAGFRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKHMSLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Chy4G088680 vs. ExPASy TrEMBL
Match: A0A1S3B5G1 (transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.7e-109
Identity = 206/210 (98.10%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PDRMPENLPLVLGNLGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRR 120
           PDRMPEN+PLVLGNL PQMSMPSCGGSLFASEL+ECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEKI+LERIEAEYKEQLAGFRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKHMSLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Chy4G088680 vs. ExPASy TrEMBL
Match: A0A0A0LAJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734210 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.0e-107
Identity = 204/210 (97.14%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSST PPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTSPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PDRMPENLPLVLGNLGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRR 120
           PDRMPEN+PLVLGNL PQMSMPSCGGSLFASEL+ECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEKI+LERIEAEYKEQLAGFRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRLKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKHMSLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Chy4G088680 vs. ExPASy TrEMBL
Match: A0A6J1J530 (transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111481437 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.2e-103
Identity = 195/210 (92.86%), Postives = 203/210 (96.67%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGS LRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSLLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PDRMPENLPLVLGNLGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PEN+PLVLGNL P MSM SCGGSLFASEL+ECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEK  LERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKSGLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           A+QWAAKH+SLTKFLEHMGCRTRIA+SSGR
Sbjct: 181 ADQWAAKHLSLTKFLEHMGCRTRIADSSGR 210

[Close]

BLAST of Chy4G088680 vs. ExPASy TrEMBL
Match: A0A6J1I2B9 (transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111470250 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.1e-102
Identity = 192/210 (91.43%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSN  SSLRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PDRMPENLPLVLGNLGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PE +PLVLGN+ PQM+MPSCGGSLFASEL+ECCRELDEGHRAWA+HKKETAWRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKA+REEEKI+LERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 211
           AEQWAAKH+SLTKFLEHMGCRT+I+ESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

[Close]

BLAST of Chy4G088680 vs. NCBI nr
Match: XP_008442545.1 (PREDICTED: transcription factor AS1 [Cucumis melo] >KAA0044093.1 transcription factor AS1 [Cucumis melo var. makuwa] >TYK25044.1 transcription factor AS1 [Cucumis melo var. makuwa])

HSP 1 Score: 402 bits (1032), Expect = 7.11e-141
Identity = 206/210 (98.10%), Postives = 209/210 (99.52%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PDRMPENLPLVLGNLGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRR 120
           PDRMPEN+PLVLGNL PQMSMPSCGGSLFASEL+ECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENIPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEKI+LERIEAEYKEQLAGFRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210
           AEQWAAKHMSLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Chy4G088680 vs. NCBI nr
Match: XP_004137788.1 (transcription factor AS1 [Cucumis sativus] >KGN58868.1 hypothetical protein Csa_001688 [Cucumis sativus])

HSP 1 Score: 396 bits (1017), Expect = 1.38e-138
Identity = 204/210 (97.14%), Postives = 207/210 (98.57%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSST PPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTSPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60

Query: 61  PDRMPENLPLVLGNLGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRR 120
           PDRMPEN+PLVLGNL PQMSMPSCGGSLFASEL+ECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PDRMPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIR KMEEVEGKVKALREEEKI+LERIEAEYKEQLAGFRKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRLKMEEVEGKVKALREEEKIALERIEAEYKEQLAGFRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210
           AEQWAAKHMSLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Chy4G088680 vs. NCBI nr
Match: XP_038903104.1 (transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription factor AS1-like [Benincasa hispida])

HSP 1 Score: 392 bits (1006), Expect = 6.54e-137
Identity = 200/210 (95.24%), Postives = 208/210 (99.05%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PDRMPENLPLVLGNLGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PEN+PLVLGNL PQMSMPSCGGSLFASEL+ECCREL+EGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPQMSMPSCGGSLFASELVECCRELNEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEKI+LERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210
           AEQWAAKH+SLTKFLEHMGCRTRIAESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTRIAESSGR 210

[Close]

BLAST of Chy4G088680 vs. NCBI nr
Match: XP_022982614.1 (transcription factor AS1-like [Cucurbita maxima] >XP_022982615.1 transcription factor AS1-like [Cucurbita maxima])

HSP 1 Score: 381 bits (979), Expect = 8.54e-133
Identity = 195/210 (92.86%), Postives = 203/210 (96.67%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSNGGS LRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSLLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PDRMPENLPLVLGNLGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PEN+PLVLGNL P MSM SCGGSLFASEL+ECCRELDEGHRAWAAHKKETAWRLRR
Sbjct: 61  PERIPENMPLVLGNLAPHMSMASCGGSLFASELVECCRELDEGHRAWAAHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKALREEEK  LERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKSGLERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210
           A+QWAAKH+SLTKFLEHMGCRTRIA+SSGR
Sbjct: 181 ADQWAAKHLSLTKFLEHMGCRTRIADSSGR 210

[Close]

BLAST of Chy4G088680 vs. NCBI nr
Match: XP_022948252.1 (transcription factor AS1-like [Cucurbita moschata] >XP_022948253.1 transcription factor AS1-like [Cucurbita moschata] >XP_022971572.1 transcription factor AS1-like [Cucurbita maxima] >XP_022971573.1 transcription factor AS1-like [Cucurbita maxima] >XP_023540705.1 transcription factor AS1-like [Cucurbita pepo subsp. pepo] >XP_023540706.1 transcription factor AS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380 bits (976), Expect = 2.45e-132
Identity = 192/210 (91.43%), Postives = 205/210 (97.62%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPAYTPIPWLQQ 60
           MATSNGGFLQTDSSTPPPSLPPWLSNSN  SSLRPPSPSVTLTLSSPTVPAY+PIPWLQQ
Sbjct: 1   MATSNGGFLQTDSSTPPPSLPPWLSNSNSSSSLRPPSPSVTLTLSSPTVPAYSPIPWLQQ 60

Query: 61  PDRMPENLPLVLGNLGPQMSMPSCGGSLFASELIECCRELDEGHRAWAAHKKETAWRLRR 120
           P+R+PE +PLVLGN+ PQM+MPSCGGSLFASEL+ECCRELDEGHRAWA+HKKETAWRLRR
Sbjct: 61  PERIPETMPLVLGNIAPQMTMPSCGGSLFASELVECCRELDEGHRAWASHKKETAWRLRR 120

Query: 121 QELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAGFRKDAEAKEQKL 180
           QELQLESEKASRIRQKMEEVEGKVKA+REEEKI+LERIEAEYKEQLAG RKDAEAKEQKL
Sbjct: 121 QELQLESEKASRIRQKMEEVEGKVKAVREEEKIALERIEAEYKEQLAGLRKDAEAKEQKL 180

Query: 181 AEQWAAKHMSLTKFLEHMGCRTRIAESSGR 210
           AEQWAAKH+SLTKFLEHMGCRT+I+ESSGR
Sbjct: 181 AEQWAAKHLSLTKFLEHMGCRTKISESSGR 210

[Close]

BLAST of Chy4G088680 vs. TAIR 10
Match: AT2G37630.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-58
Identity = 132/214 (61.68%), Postives = 160/214 (74.77%), Query Frame = 0


Query: 1   MATSNGGFLQTDSSTPPPS--LPPWLSNSNGGSSLRPPSPSVTLTLSSPTVPA---YTPI 60
           MA SNGGFL ++    PP+  +PPWL+ SN G+++    PSVTLTLS  TV A     PI
Sbjct: 156 MANSNGGFLHSEQQVQPPNPVIPPWLATSNNGNNVVARPPSVTLTLSPSTVAAAAPQPPI 215

Query: 61  PWL--QQPDRMPENLP--LVLGNLGPQMSMPSCGG---SLFASELIECCRELDEGHRAWA 120
           PWL  QQP+R  EN P  LVLG++     MPSC G   S+F SEL+ECCREL+EGHRAWA
Sbjct: 216 PWLQQQQPER-AENGPGGLVLGSM-----MPSCSGSSESVFLSELVECCRELEEGHRAWA 275

Query: 121 AHKKETAWRLRRQELQLESEKASRIRQKMEEVEGKVKALREEEKISLERIEAEYKEQLAG 180
            HKKE AWRLRR ELQLESEK  R R+KMEE+E K+KALREE+K ++E+IE EY+EQL G
Sbjct: 276 DHKKEAAWRLRRLELQLESEKTCRQREKMEEIEAKMKALREEQKNAMEKIEGEYREQLVG 335

Query: 181 FRKDAEAKEQKLAEQWAAKHMSLTKFLE-HMGCR 202
            R+DAEAK+QKLA+QW ++H+ LTKFLE  MGCR
Sbjct: 336 LRRDAEAKDQKLADQWTSRHIRLTKFLEQQMGCR 363

The following BLAST results are available for this feature:

BLAST of Chy4G088680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80931	1.4e-57	61.68	Transcription factor AS1 OS=Arabidopsis thaliana OX=3702 GN=AS1 PE=1 SV=1	[more]
Q94IB1	1.9e-38	51.06	Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=RS2 P...	[more]
Q9S7B2	1.9e-33	44.72	Protein rough sheath 2 OS=Zea mays OX=4577 GN=RS2 PE=1 SV=1	[more]

BLAST of Chy4G088680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DN74	3.7e-109	98.10	Transcription factor AS1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B5G1	3.7e-109	98.10	transcription factor AS1 OS=Cucumis melo OX=3656 GN=LOC103486384 PE=4 SV=1	[more]
A0A0A0LAJ9	2.0e-107	97.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G734210 PE=4 SV=1	[more]
A0A6J1J530	5.2e-103	92.86	transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111481437 PE=4 S...	[more]
A0A6J1I2B9	1.1e-102	91.43	transcription factor AS1-like OS=Cucurbita maxima OX=3661 GN=LOC111470250 PE=4 S...	[more]

BLAST of Chy4G088680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008442545.1	7.11e-141	98.10	PREDICTED: transcription factor AS1 [Cucumis melo] >KAA0044093.1 transcription f...	[more]
XP_004137788.1	1.38e-138	97.14	transcription factor AS1 [Cucumis sativus] >KGN58868.1 hypothetical protein Csa_...	[more]
XP_038903104.1	6.54e-137	95.24	transcription factor AS1-like [Benincasa hispida] >XP_038903105.1 transcription ...	[more]
XP_022982614.1	8.54e-133	92.86	transcription factor AS1-like [Cucurbita maxima] >XP_022982615.1 transcription f...	[more]
XP_022948252.1	2.45e-132	91.43	transcription factor AS1-like [Cucurbita moschata] >XP_022948253.1 transcription...	[more]

BLAST of Chy4G088680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37630.1	1.0e-58	61.68	myb-like HTH transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..179
None	No IPR available	COILS	Coil	Coil	coord: 120..157
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	PANTHER	PTHR47214	PROTEIN ROUGH SHEATH 2 HOMOLOG	coord: 18..210
IPR031055	Protein rough sheath 2 /ASYMMETRIC LEAVES1	PANTHER	PTHR47214:SF3	TRANSCRIPTION FACTOR AS1	coord: 18..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G088680.1	Chy4G088680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010338	leaf formation
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005634	nucleus