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Chy4G087930 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCGTGATCGACCTTTTGACCAGAGTAGATGCGATCTGCCAGAAGTACGACAAATATGACATAGAAAAGCAGAGAGATCTCAATGTCTCCGGCGACGATGCCTTCGCTCGTCTCTACGCCACTGTTGAAGCTGACATTGAAGCTGCTCTACAGGTTTGACTCCGATCCCTAAGTCAATTTCTCAGTTTCTTCTGTTGCTGAATAAGGAAATGAATGTTTTAATTCTGACTTAGTAGCCTCTTCCGTTTCTGATCTACGTTTAATTCTGTGGATAAATCTTGGTTTACATAGATGATTTAGCATCTTAATTTGCTGGTGAGGAGGGCTGGATTCTAATTTAGGAGTGTGTTGTGTGTGTCTGTGCAGAAAGCGGAGGATGCTTCTAAAGAGAAGAATAGGGCATCCGTTGTGGCATTGAATGCAGAGATTCGTCGTACAAAAGCTCGTTTACTGGAGGAAGTTCCCAAGTTGCAAAGGTTGGCTGTTAAGAGGGTTTGTATTCACTGTCTTCACTGAGTTTATTTTGAAAATTCACTCTCGTAACTCAAATTCCATCTTAAAAGCTATAGGTCTCATATGAATTGATGAGAAGATTGTGATGAAAGGATTAGGTTCCTAAATTCATTTTGAACTTAGGATGGTTTTGCAATTTTTATACTCAATTGAAGTTGAGCCACTGAATTTGAACTGTCTAGCTTCTACCTATAGATTGCATTGGATGTTCACATAATCTATTGACAGGTTAAAGGGCTATCAACTGAAGATCTTACCACTCGAAATGATTTGGTGCTTGCATTACCGGATAGAATTCAAGCTATACCAGATGGAACTGTGACTACCACGAAGAATAATGGGGGCTGGACATCCTCAGCTTCACGGACTGAAATCAAATTTGACTCAGGTGATGTATTAAATTCAGTTGAATTTTGTTCAACTGTCTGAAACTTTCTTTCTACTTTAAGTTGTCAATACCATGAACTAAACTTATATCTGATATGGACCTTTAAATTGATAAAAGATGGGCGGTTTGATGATGAGTACTTCCAACACACCGAGCAGTCCAGTCAGTTCAGGCAGGAGTATGAAATGAGGAAAATGAAGCAGGTAAATTGTATATATCCTAGTGTAGTCTCTTTGTTGAAGAAGGAAGGTTTCGTGCTTAATGGCCAATTGCTGTGGTTTAAACCCTTCATTTTGGTGCATATGCAGGATCAAGGATTGGACATGATATCAGAAGGGTTGGATACTCTGAAGAATATGGCACATGATATGAATGAGGTTAGTTATCTTCTAGGCGGGAGATCTTATCGTTATTCATTTTTTCCCCTTACCAACGTATTAGTTGATTGTGATTGTGGCATGTTATTTGCAGGAAATAGACAGGCAAGTCCCTTTGATGGACGAGATTGACACTAAGGTAATGATATCTCTCTCATTAGATTTTATATCTCTAATTACACGTATGTATATGTATATATGTTCTTGTAGTCTCGATGTTCATGCTTATGAGAACCACCCAATTTTCTTTTTGAATCATGGCAGGTGGACAAGGCTGCATCTGACCTTAAGAACACCAACGTTAGATTAAAGGACACAGTTAACCAGGTTTTGCTCTGTTCTTCCGATCTCTATTTAACCTTTATTGTCAGTTCTTGAAGTGTATATTCCTGACCCTTGTGTACATACATGCTTCTCCTTATTCCTCGTGCATGCCGAATACCTAGATTTATATGTATATTTGTAAGAAGTTTGCAAGTTTATCTAACATGAGTTTTATTTTGCTACAGCTAAGGTCCAGCAGAAATTTCTGTATTGATATCATTTTGTTGTGTATAATCTTGGGGATTGCTGCCTATCTATACAAGTAAGTTTTTACATTCTACCCGTCTCCTAAAGAGCGATAGCTGTAATCGTTTAGCGTTTCTAAATCATTTTTAATTCTCCCCATGTGCCATCTTTACCTTTCATCATGTACTGAAATTTGACATATGGCTATTTTATGGGTGGCTGACTCGGAAAGGGAAATAGAATGTTGGAGATGTCATTTGATGATGTTTGGGAGTTGGTGAAGTTCGTTTCCTTGTGGGCTTCATTCATGTTGGCTTTTTGTAACTATGACTTTAGTTTGATTTTGTTGGATTGAAAACCATTTTTTTGTAGTTTTTTGGGGAGTTCCTTTTTCCTTTTGGGCTAGTTTTTTTTATACCTCTTGTACATTCTTTCACTTCTCTTCATAAAACTTGGTTCTTACCAAAAAATAGAAAGAAAGAAAGAAAGAAAGGAGGGAAGGAAGAAAAAGGATTCATGTTTGGAAAACTGATGTTAGACCTGGACTAAGTCACTTTTTAAAATTGTTCGAGGAAGTGGCATTTGGAAAGACTAGAGAAACCTGGATCTCTGGGCCCTGGGGTATTGGTTAATTGAAATTTAACGTGCTTGGTTTCTTGTAAAATGTGCAATCAATTGGGATCCGCTCTTTTGGGCTGCAATGATGAATGAGTAACAATATTTTCCTGGGGAATGGCCTTGATAGGTACTGGCGAGTGCCCGTAGAATTTCATATCCTACTATAAGGTCTTAACAGCCCGACCATCCATTATCCTAAAAATTCTATTTAATTTTGTATGTTTCAACTTAGCGGTTCTTTAGGCAAGTGCAACTGAACTTTGTTATGGAATGTGGAAATAGTACTCTATCTTTGCAAGTTCGTGATTCAGATCCTATCTAGTTGATCAAGCTTCCATTCCAACTGTAGTATTATTAACTGATTGGGATTTCTATCAGATCTTCTAGGGAATTGTTGAAAGTTGTGCGAATTTCAATTTTTATCGATTCATTTTATTTATTGATTTACGTTGATAAACCTCATATATTATAGAAAGTGAGAATCCTGTTACGTAAGGAGGTTCCCGAATAAAGAGTTTTGGGATGTCTATAAATAACCTTTGAAGGGTCTAGGCTCAATCTTTTAGGCTGGGAAGCCTGAACTTAAAACAATGTCTGTGGACGTTGCTACACCTACAAGGTTGAAAGGAATGAAAGAAAGTGTCTTTTGTTTTTTTTTGAGAGATTTTATCTCATAATTATATAAAAACTCGAAACTGTTGATATGTTAGCTGAAGTTTTTTATGTTTCGTTTGGTTAACCATGTCAAAATAATTTGAAGTTCTAAAAGAGATTGTCTCTCTCCGCAGTGTGTTGAAGAAGTGAGCTAACAAAGGGGTGAAATCTTCATGTTCTCGTGGAATATTTGTGGAATATTTGTGTCACGGTTGCTAAGAAGAATATCTGTATCCAGTACATTATCTGATCGTGTTTGTGTTGTTTATAATATTCGTATGTCATATTCTTTTACACCGGACTCGCTGTGTCCTATCAATTCTTGGTTATGTTGCTTGATTCTTTAATGTTGCACTTGCATAACCTGTCTTTGCTTTTGGCTTCAAATTTGAATACTGATCTCCCATGCTTGACGTTTTAGATCAGATGTAGAACTCAAGACAACATGTATTGAAATGTTGTGTGATAACAGCCGATGATCGATGAATGTCGTTGCCATGTAAGGTCATCCTTCCCTAATGGATTGTATACAACCATTGCTTTTGTTTATGATATCAATTTGGACATGCATCTCAAAGTTGATCATAATCAAAACTTTGATCAGACGGGTAGTCCTTTTGGCTTCTCTCTACTGCCCATTATAGCCCGGGAGAAAATGGAGATGAGGAATGAGGATTGA ATGAGCGTGATCGACCTTTTGACCAGAGTAGATGCGATCTGCCAGAAGTACGACAAATATGACATAGAAAAGCAGAGAGATCTCAATGTCTCCGGCGACGATGCCTTCGCTCGTCTCTACGCCACTGTTGAAGCTGACATTGAAGCTGCTCTACAGAAAGCGGAGGATGCTTCTAAAGAGAAGAATAGGGCATCCGTTGTGGCATTGAATGCAGAGATTCGTCGTACAAAAGCTCGTTTACTGGAGGAAGTTCCCAAGTTGCAAAGGTTGGCTGTTAAGAGGGTTAAAGGGCTATCAACTGAAGATCTTACCACTCGAAATGATTTGGTGCTTGCATTACCGGATAGAATTCAAGCTATACCAGATGGAACTGTGACTACCACGAAGAATAATGGGGGCTGGACATCCTCAGCTTCACGGACTGAAATCAAATTTGACTCAGATGGGCGGTTTGATGATGAGTACTTCCAACACACCGAGCAGTCCAGTCAGTTCAGGCAGGAGTATGAAATGAGGAAAATGAAGCAGGATCAAGGATTGGACATGATATCAGAAGGGTTGGATACTCTGAAGAATATGGCACATGATATGAATGAGGAAATAGACAGGCAAGTCCCTTTGATGGACGAGATTGACACTAAGGTGGACAAGGCTGCATCTGACCTTAAGAACACCAACGTTAGATTAAAGGACACAGTTAACCAGCCGATGATCGATGAATGTCGTTGCCATGTAAGGTCATCCTTCCCTAATGGATTGTATACAACCATTGCTTTTGTTTATGATATCAATTTGGACATGCATCTCAAAGTTGATCATAATCAAAACTTTGATCAGACGGGTAGTCCTTTTGGCTTCTCTCTACTGCCCATTATAGCCCGGGAGAAAATGGAGATGAGGAATGAGGATTGA ATGAGCGTGATCGACCTTTTGACCAGAGTAGATGCGATCTGCCAGAAGTACGACAAATATGACATAGAAAAGCAGAGAGATCTCAATGTCTCCGGCGACGATGCCTTCGCTCGTCTCTACGCCACTGTTGAAGCTGACATTGAAGCTGCTCTACAGAAAGCGGAGGATGCTTCTAAAGAGAAGAATAGGGCATCCGTTGTGGCATTGAATGCAGAGATTCGTCGTACAAAAGCTCGTTTACTGGAGGAAGTTCCCAAGTTGCAAAGGTTGGCTGTTAAGAGGGTTAAAGGGCTATCAACTGAAGATCTTACCACTCGAAATGATTTGGTGCTTGCATTACCGGATAGAATTCAAGCTATACCAGATGGAACTGTGACTACCACGAAGAATAATGGGGGCTGGACATCCTCAGCTTCACGGACTGAAATCAAATTTGACTCAGATGGGCGGTTTGATGATGAGTACTTCCAACACACCGAGCAGTCCAGTCAGTTCAGGCAGGAGTATGAAATGAGGAAAATGAAGCAGGATCAAGGATTGGACATGATATCAGAAGGGTTGGATACTCTGAAGAATATGGCACATGATATGAATGAGGAAATAGACAGGCAAGTCCCTTTGATGGACGAGATTGACACTAAGGTGGACAAGGCTGCATCTGACCTTAAGAACACCAACGTTAGATTAAAGGACACAGTTAACCAGCCGATGATCGATGAATGTCGTTGCCATGTAAGGTCATCCTTCCCTAATGGATTGTATACAACCATTGCTTTTGTTTATGATATCAATTTGGACATGCATCTCAAAGTTGATCATAATCAAAACTTTGATCAGACGGGTAGTCCTTTTGGCTTCTCTCTACTGCCCATTATAGCCCGGGAGAAAATGGAGATGAGGAATGAGGATTGA MSVIDLLTRVDAICQKYDKYDIEKQRDLNVSGDDAFARLYATVEADIEAALQKAEDASKEKNRASVVALNAEIRRTKARLLEEVPKLQRLAVKRVKGLSTEDLTTRNDLVLALPDRIQAIPDGTVTTTKNNGGWTSSASRTEIKFDSDGRFDDEYFQHTEQSSQFRQEYEMRKMKQDQGLDMISEGLDTLKNMAHDMNEEIDRQVPLMDEIDTKVDKAASDLKNTNVRLKDTVNQPMIDECRCHVRSSFPNGLYTTIAFVYDINLDMHLKVDHNQNFDQTGSPFGFSLLPIIAREKMEMRNED* Homology
BLAST of Chy4G087930 vs. ExPASy Swiss-Prot
Match: Q9SF29 (Syntaxin-71 OS=Arabidopsis thaliana OX=3702 GN=SYP71 PE=1 SV=1) HSP 1 Score: 349.0 bits (894), Expect = 5.5e-95 Identity = 182/237 (76.79%), Postives = 207/237 (87.34%), Query Frame = 0
BLAST of Chy4G087930 vs. ExPASy Swiss-Prot
Match: Q94KK5 (Syntaxin-73 OS=Arabidopsis thaliana OX=3702 GN=SYP73 PE=2 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 2.0e-76 Identity = 155/238 (65.13%), Postives = 191/238 (80.25%), Query Frame = 0
BLAST of Chy4G087930 vs. ExPASy Swiss-Prot
Match: Q94KK6 (Syntaxin-72 OS=Arabidopsis thaliana OX=3702 GN=SYP72 PE=2 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 9.1e-74 Identity = 151/238 (63.45%), Postives = 191/238 (80.25%), Query Frame = 0
BLAST of Chy4G087930 vs. ExPASy Swiss-Prot
Match: Q54IX6 (Probable syntaxin-8B OS=Dictyostelium discoideum OX=44689 GN=syn8B PE=3 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 4.5e-04 Identity = 52/221 (23.53%), Postives = 107/221 (48.42%), Query Frame = 0
BLAST of Chy4G087930 vs. ExPASy TrEMBL
Match: A0A5A7TS26 (Syntaxin-71 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002460 PE=3 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 4.6e-121 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Chy4G087930 vs. ExPASy TrEMBL
Match: A0A1S3B689 (syntaxin-71 OS=Cucumis melo OX=3656 GN=LOC103486468 PE=3 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 4.6e-121 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Chy4G087930 vs. ExPASy TrEMBL
Match: A0A5D3DBR1 (Syntaxin-71-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00460 PE=3 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 6.7e-120 Identity = 231/235 (98.30%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Chy4G087930 vs. ExPASy TrEMBL
Match: A0A1S3CFA3 (syntaxin-71-like OS=Cucumis melo OX=3656 GN=LOC103500265 PE=3 SV=1) HSP 1 Score: 440.3 bits (1131), Expect = 6.7e-120 Identity = 231/235 (98.30%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Chy4G087930 vs. ExPASy TrEMBL
Match: A0A0A0LFR8 (t-SNARE coiled-coil homology domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G738970 PE=3 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 3.3e-119 Identity = 232/235 (98.72%), Postives = 233/235 (99.15%), Query Frame = 0
BLAST of Chy4G087930 vs. NCBI nr
Match: XP_008442667.1 (PREDICTED: syntaxin-71 [Cucumis melo] >XP_011651951.2 syntaxin-71 [Cucumis sativus] >KAE8651039.1 hypothetical protein Csa_001728 [Cucumis sativus]) HSP 1 Score: 442 bits (1138), Expect = 1.47e-154 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Chy4G087930 vs. NCBI nr
Match: KAA0044019.1 (syntaxin-71 [Cucumis melo var. makuwa] >TYK25121.1 syntaxin-71 [Cucumis melo var. makuwa]) HSP 1 Score: 442 bits (1138), Expect = 7.40e-154 Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Chy4G087930 vs. NCBI nr
Match: KAA0068161.1 (syntaxin-71-like [Cucumis melo var. makuwa] >TYK21081.1 syntaxin-71-like [Cucumis melo var. makuwa]) HSP 1 Score: 439 bits (1128), Expect = 1.99e-153 Identity = 231/235 (98.30%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Chy4G087930 vs. NCBI nr
Match: XP_008461731.1 (PREDICTED: syntaxin-71-like [Cucumis melo]) HSP 1 Score: 439 bits (1128), Expect = 4.90e-153 Identity = 231/235 (98.30%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of Chy4G087930 vs. NCBI nr
Match: XP_004144411.1 (syntaxin-71 [Cucumis sativus] >KGN58406.1 hypothetical protein Csa_001271 [Cucumis sativus]) HSP 1 Score: 436 bits (1122), Expect = 4.02e-152 Identity = 231/235 (98.30%), Postives = 234/235 (99.57%), Query Frame = 0
BLAST of Chy4G087930 vs. TAIR 10
Match: AT3G09740.1 (syntaxin of plants 71 ) HSP 1 Score: 349.0 bits (894), Expect = 3.9e-96 Identity = 182/237 (76.79%), Postives = 207/237 (87.34%), Query Frame = 0
BLAST of Chy4G087930 vs. TAIR 10
Match: AT3G61450.2 (syntaxin of plants 73 ) HSP 1 Score: 299.3 bits (765), Expect = 3.5e-81 Identity = 158/238 (66.39%), Postives = 193/238 (81.09%), Query Frame = 0
BLAST of Chy4G087930 vs. TAIR 10
Match: AT3G61450.1 (syntaxin of plants 73 ) HSP 1 Score: 287.3 bits (734), Expect = 1.4e-77 Identity = 155/238 (65.13%), Postives = 191/238 (80.25%), Query Frame = 0
BLAST of Chy4G087930 vs. TAIR 10
Match: AT3G45280.1 (syntaxin of plants 72 ) HSP 1 Score: 278.5 bits (711), Expect = 6.5e-75 Identity = 151/238 (63.45%), Postives = 191/238 (80.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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