Chy4G086120 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCCCAGCTAAAACCGGCTCGATTATAACAACAGGGAACGTGGCATCAAATATCGGCGGTGCGGCGTCACACGCTTACACATGCTCGAAGCATGCGGTAGTGGGGTTGATGAAGAACGCGGCGGGAGAGTTGGGGCAGTTCGGGATTAGGTGAATTGTTTATCTCCGTATGGGTTGATGACGGGGATGGCGAGGAAGTTGGATGAGATGCAGTTTGAGATGATTATGAGTTTCAGGGCAAATTTGAAAGGAGTGACGCTTAAGGTTGAAGATGTGGCCAATGCAGCTTTGTTTTTGGCAAGTGATGAAAGTAGGTATGTGAGTGGCCATAATTTGTTGATTGATGGAGGTATTAGTATTGTTAATCCTAATATCCAAAATTTTCAATACCCTCAAAATTAGGTGCTTGTTGGTCCGAAGGTAAAATTATTAGAAGAAGCTATGAGTAGTTTAGTTATTAGAAAAGATAGATTTCTAAATCTTTAACCAATGGTTCAATATTATTGTGTTCTTCGCTTAATTGCTTTTTTTGTACACTATGAACTTTTGTGTAATAAATGAAGCTGTATCAAAGAAATAACTATAACGATAGATTATTTTGAGTAAAACTTGGATATGGGCAGGTGTCACCCAGCACTTGCATCCCTCTTCCTCAGTTTTCTTTAATTTCCTTCTTCATCCAAATCTCAATTTCACTTCCTTTTTCTTCCTTCATCAATCTCCTAATCGTTCTTTGTTCTTATTTTTAAAGATTGGATTTATATTATATATTAAAATGAAAGAGCAGTGGACATGAGTTATGAGTTTAATTTTAAATATTGAGAAAGCTGTTGTAATAGTTTTCTACGTCTTTTAATGATAATTAATAAATTAGTGTTATATATAATTTTAATATACCAACATTAACATAATTCAATTATCTTGTAATATTGAGCTTAAACTAAGATCCTCAATTCCTTAAAAAGTAATATTTATACTACTCATCTAAGGTAAGAACACTAAAATCTCGCAAAGGTTTATTAATATATTAATATGCTAGTATAAACTCATCCAAAGTGTTATATAAATATACTTTTCTTCAAATTTAAAGTACACGTAAATGTACTAACATTATTATTTTCTTTTTGGCCTGTTTTTTGGATGGTGAAAGGAGGACTGAGTGTGAATTATTCAATTTGAAAATGGCTACTTATTAAATGACTTTTTCATCTTCTTTGTATTTTCTTCTTCTTTTTCTTCCTAATCGACATATTGTATGAAACTTATGATTTGAGTTAATTAATTGCATAGATTAAAGTAAGTGCACGAACAATAATTATTATTGTCCTTGAAAACAACAAAGCATATTGAAAATGAATGGTGGGGTAAATGCAGGTAGATTTCTTAAAGCTTTCATTAAGAGTTTAAATTCATTCCTCTGTAAAAGTTTAAGACTTTAATAATTTATATTTTTTTTAAAAAAGATATATAAATTAGGAGGTGGACTAGAACATCTTCACTTGATGGACATATTCATCATCTTCCATCTGATATGTGTTCAATAAACACGGAGCGAGATATAATAGTACAAAAGTTTGACACAATTTTTTTTTCTAAAAGGAACATAATGGTGAGTATATATTGATACAATTATCAAAGTTTTGAGTTCAAGTTGATACATCACTCACACTTTAGGGGTTTAAATTTATTTAAAAAAAAAAAAAAAACTAAAATGGCCAATAAAAGAAGGGACCAGTAGTGAAGTGAGAAAAAAAAAATGGAGAATGAGTGAAACTTGCAACTTTCGACTTTTGAGACATTCAATGAAACATTTAATCATACCTAATTGCATTTAAACTTTTATCTATTTTGAATATAAATTCATTCACACAAAATTTGAAGAGTGCTTTTGCGAAAATTTAAAAAAAATTATGATAATAGGGTCTATGTCTCTATATTTTCTAAATTAATTAAATAGCAAATTTAAAAGTCAATAACTCTTTGATAGTTTTCTAATAGTCGTCCAATACCTACGTAAATCTGTCGGTGCTTAGATGCATTATTAAAAAATTGGTCATTGTCTTTCCAGCCATACACACCATAACAAAGCTCACAATATATTTCTTCTCAGCCATTGGTTTATAGGACCACAATATTTATATATTTATATATATATATATATATATATATTTTAATTATAATTGTTTAAGCATAATTAATCATATATGAATTATACCTTCCTAAAATTGGGAAGTTATGTTGTTTTTTTATTCGTCTAAGCCATCTAAAGATAAAATTCTCAAATTATATTATACTTTAATCGACTAAATTGAAAATTAATTTGAAAGTGGTTTAATTTTCTCAAATTTTCTTTTTTACGAATTTAAACCTATGAAACCCCACATAACTTTAGGGGGAAATGTTATATAATTATAGGACGACTATGTATATCTAGGTTTTATTATTATTATTATTATTATGAAAGATAATTATTGGTTTGTGGATTAAAAATTTTGATACGGCTTTGGATACAAAATTTTTAATTATTTTTTTTAAAAAAATCATCAGCCACATAGTTAAAATGAACATGTTAGAAATGATTTTTTTATGCGTATTTTAATAAAATAAATAATTTTTGGACCAAACGTATTGTTTAATATTCCAACTATTTTTCCATTATAAATATACACTCCTTCTCCTCTAAAACCATCAATAATACTTTCTCTCCTCTAAAAGAATAAGAAAGAAAAATGACAAGCAGTGAGGTCATCTCTACGACAACAGGGCAAAGGAGGTAATCAAAAAACAATATTTTAGCTAAACTTTTCTTTTATATATATATAAATCTATTTGAACATCTTCTAAGTTTTATATCCATAATTAATATTAATTTGCAATTTTTTTTATTTTTTATTTTTTTGTCAACAATTCCAGTGTTAAGCAAGTTATTCAGGGTTTTTTTCTTTTTTCTTTTTTAATTCCAAAATAAAATATTGAAAAACATGAAGTCGTTTGAAAATCAATTTTGGGAAATAATTATATTAATTATAGCTAGGGTCATCTTTGCTAGTATTTGATATTGAGATGTTGATAAAAAATCTTGGCTTTTGAATCACTTGTCTATTGATGACTTTATGTCCATTTTAATCCAAAGGAAAAGAAAAAACAAACAAACAAGCAAGCTTTGTATTTCTCTAGTTTATTTGGTTCATATTCTAATTCCTTGTGTGTGATCCATTAGACTAGAAGGAAAGGTGGCAATAATAACCGGCGGTGCAAGCGGGATTGGCGAATGCACTGCAAAACTCTTTGTCCACCATGGTGCCAAAGTAGTCGTCGCAGACATCCAAGACGACCTCGGTCGTGCATTGTGTGCCAACGTGCTCGGCTCGACCAACTCCCTCTATGTTCACTGCGATGTCACAGACGAATCCCAAGTCCAAGCGGCAGTGGCAGCTGCAGTAGAAACCTTCGGCAAGCTCGACATCATGATGAATAATGCAGGCATAGCCGACCCCAGCAAGCCTCGAATCATCGACAACGATAAACAAGATTTCGATCGAGTCCTCAGCGTCAACATCACAGGTGTCTTCCTCGGCATCAAACATGCAGCACAGGCCATGATCCCAGTCAAAACTGGCTCGATTTTATCGACCGCAAGCGTGGCATCGTATATCGGTGGCTCTGCATCGCACGCTTACACATGTTCGAAGCACGCAGTGGTAGGGCTAACGAAGAATGCCGCGGTGGAGTTGGGGCAGTTTGGGATTAGGGTAAATTGTTTGTCGCCTTATGTGTTGGCGACGCCGTTAGCAACGGAGTATGTGGATTTGGACGGGGCGGAGTTTGAGAAGTATGCGAGTTCTAGGGCAAATTTGAAAGGAGTAACACTTAAGGCTGAAGATGTGGCTAATGCAGCCTTGTTTTTGGCAAGTGATGAAAGTAGGTATGTGAGTGGCCATAATTTGTTTGTTGATGGAGGTTTTAGTATTGTTAATCCTAATATCCAAATCTTCCAATACACTCAATAG ATGATCCCAGCTAAAACCGGCTCGATTATAACAACAGGGAACGTGGCATCAAATATCGGCGGTGCGGCGTCACACGCTTACACATGCTCGAAGCATGCGGTAGTGGGGTTGATGAAGAACGCGGCGGGAGAGTTGGGGCAGTTCGGGATTAGGGCAAATTTGAAAGGAGTGACGCTTAAGGTTGAAGATGTGGCCAATGCAGCTTTGTTTTTGGCAAGTGATGAAAGTAGACTAGAAGGAAAGGTGGCAATAATAACCGGCGGTGCAAGCGGGATTGGCGAATGCACTGCAAAACTCTTTGTCCACCATGGTGCCAAAGTAGTCGTCGCAGACATCCAAGACGACCTCGGTCGTGCATTGTGTGCCAACGTGCTCGGCTCGACCAACTCCCTCTATGTTCACTGCGATGTCACAGACGAATCCCAAGTCCAAGCGGCAGTGGCAGCTGCAGTAGAAACCTTCGGCAAGCTCGACATCATGATGAATAATGCAGGCATAGCCGACCCCAGCAAGCCTCGAATCATCGACAACGATAAACAAGATTTCGATCGAGTCCTCAGCGTCAACATCACAGGTGTCTTCCTCGGCATCAAACATGCAGCACAGGCCATGATCCCAGTCAAAACTGGCTCGATTTTATCGACCGCAAGCGTGGCATCGTATATCGGTGGCTCTGCATCGCACGCTTACACATGTTCGAAGCACGCAGTGGTAGGGCTAACGAAGAATGCCGCGGTGGAGTTGGGGCAGTTTGGGATTAGGGTAAATTGTTTGTCGCCTTATGTGTTGGCGACGCCGTTAGCAACGGAGTATGTGGATTTGGACGGGGCGGAGTTTGAGAAGTATGCGAGTTCTAGGGCAAATTTGAAAGGAGTAACACTTAAGGCTGAAGATGTGGCTAATGCAGCCTTGTTTTTGGCAAGTGATGAAAGTAGGTATGTGAGTGGCCATAATTTGTTTGTTGATGGAGGTTTTAGTATTGTTAATCCTAATATCCAAATCTTCCAATACACTCAATAG ATGATCCCAGCTAAAACCGGCTCGATTATAACAACAGGGAACGTGGCATCAAATATCGGCGGTGCGGCGTCACACGCTTACACATGCTCGAAGCATGCGGTAGTGGGGTTGATGAAGAACGCGGCGGGAGAGTTGGGGCAGTTCGGGATTAGGGCAAATTTGAAAGGAGTGACGCTTAAGGTTGAAGATGTGGCCAATGCAGCTTTGTTTTTGGCAAGTGATGAAAGTAGACTAGAAGGAAAGGTGGCAATAATAACCGGCGGTGCAAGCGGGATTGGCGAATGCACTGCAAAACTCTTTGTCCACCATGGTGCCAAAGTAGTCGTCGCAGACATCCAAGACGACCTCGGTCGTGCATTGTGTGCCAACGTGCTCGGCTCGACCAACTCCCTCTATGTTCACTGCGATGTCACAGACGAATCCCAAGTCCAAGCGGCAGTGGCAGCTGCAGTAGAAACCTTCGGCAAGCTCGACATCATGATGAATAATGCAGGCATAGCCGACCCCAGCAAGCCTCGAATCATCGACAACGATAAACAAGATTTCGATCGAGTCCTCAGCGTCAACATCACAGGTGTCTTCCTCGGCATCAAACATGCAGCACAGGCCATGATCCCAGTCAAAACTGGCTCGATTTTATCGACCGCAAGCGTGGCATCGTATATCGGTGGCTCTGCATCGCACGCTTACACATGTTCGAAGCACGCAGTGGTAGGGCTAACGAAGAATGCCGCGGTGGAGTTGGGGCAGTTTGGGATTAGGGTAAATTGTTTGTCGCCTTATGTGTTGGCGACGCCGTTAGCAACGGAGTATGTGGATTTGGACGGGGCGGAGTTTGAGAAGTATGCGAGTTCTAGGGCAAATTTGAAAGGAGTAACACTTAAGGCTGAAGATGTGGCTAATGCAGCCTTGTTTTTGGCAAGTGATGAAAGTAGGTATGTGAGTGGCCATAATTTGTTTGTTGATGGAGGTTTTAGTATTGTTAATCCTAATATCCAAATCTTCCAATACACTCAATAG MIPAKTGSIITTGNVASNIGGAASHAYTCSKHAVVGLMKNAAGELGQFGIRANLKGVTLKVEDVANAALFLASDESRLEGKVAIITGGASGIGECTAKLFVHHGAKVVVADIQDDLGRALCANVLGSTNSLYVHCDVTDESQVQAAVAAAVETFGKLDIMMNNAGIADPSKPRIIDNDKQDFDRVLSVNITGVFLGIKHAAQAMIPVKTGSILSTASVASYIGGSASHAYTCSKHAVVGLTKNAAVELGQFGIRVNCLSPYVLATPLATEYVDLDGAEFEKYASSRANLKGVTLKAEDVANAALFLASDESRYVSGHNLFVDGGFSIVNPNIQIFQYTQ* Homology
BLAST of Chy4G086120 vs. ExPASy Swiss-Prot
Match: Q94KL7 (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia OX=55183 PE=1 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 4.6e-90 Identity = 167/275 (60.73%), Postives = 215/275 (78.18%), Query Frame = 0
BLAST of Chy4G086120 vs. ExPASy Swiss-Prot
Match: Q7FAE1 (Momilactone A synthase OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0179200 PE=2 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 8.6e-81 Identity = 160/274 (58.39%), Postives = 203/274 (74.09%), Query Frame = 0
BLAST of Chy4G086120 vs. ExPASy Swiss-Prot
Match: A3F5F0 (Secoisolariciresinol dehydrogenase OS=Sinopodophyllum hexandrum OX=93608 GN=SDH PE=1 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 1.6e-71 Identity = 137/260 (52.69%), Postives = 179/260 (68.85%), Query Frame = 0
BLAST of Chy4G086120 vs. ExPASy Swiss-Prot
Match: F1SWA0 (Zerumbone synthase OS=Zingiber zerumbet OX=311405 GN=ZSD1 PE=1 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.6e-71 Identity = 138/266 (51.88%), Postives = 181/266 (68.05%), Query Frame = 0
BLAST of Chy4G086120 vs. ExPASy Swiss-Prot
Match: Q94KL8 (Secoisolariciresinol dehydrogenase (Fragment) OS=Podophyllum peltatum OX=35933 PE=1 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.4e-70 Identity = 134/259 (51.74%), Postives = 178/259 (68.73%), Query Frame = 0
BLAST of Chy4G086120 vs. ExPASy TrEMBL
Match: A0A0A0LGR0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778270 PE=4 SV=1) HSP 1 Score: 508.8 bits (1309), Expect = 1.7e-140 Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0
BLAST of Chy4G086120 vs. ExPASy TrEMBL
Match: A0A5A7TKJ5 (Secoisolariciresinol dehydrogenase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004260 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 1.0e-129 Identity = 235/272 (86.40%), Postives = 254/272 (93.38%), Query Frame = 0
BLAST of Chy4G086120 vs. ExPASy TrEMBL
Match: A0A1S3B7H5 (secoisolariciresinol dehydrogenase-like OS=Cucumis melo OX=3656 GN=LOC103486649 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 1.0e-129 Identity = 235/272 (86.40%), Postives = 254/272 (93.38%), Query Frame = 0
BLAST of Chy4G086120 vs. ExPASy TrEMBL
Match: A0A0A0LEP1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778280 PE=4 SV=1) HSP 1 Score: 464.5 bits (1194), Expect = 3.7e-127 Identity = 235/275 (85.45%), Postives = 249/275 (90.55%), Query Frame = 0
BLAST of Chy4G086120 vs. ExPASy TrEMBL
Match: A0A6J1J123 (secoisolariciresinol dehydrogenase-like OS=Cucurbita maxima OX=3661 GN=LOC111481719 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 6.8e-121 Identity = 219/264 (82.95%), Postives = 242/264 (91.67%), Query Frame = 0
BLAST of Chy4G086120 vs. NCBI nr
Match: XP_004136700.3 (secoisolariciresinol dehydrogenase [Cucumis sativus]) HSP 1 Score: 514 bits (1324), Expect = 4.40e-182 Identity = 261/265 (98.49%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of Chy4G086120 vs. NCBI nr
Match: KAE8651098.1 (hypothetical protein Csa_002484 [Cucumis sativus]) HSP 1 Score: 512 bits (1318), Expect = 3.74e-181 Identity = 259/265 (97.74%), Postives = 262/265 (98.87%), Query Frame = 0
BLAST of Chy4G086120 vs. NCBI nr
Match: XP_004136701.3 (secoisolariciresinol dehydrogenase isoform X1 [Cucumis sativus]) HSP 1 Score: 481 bits (1238), Expect = 5.69e-169 Identity = 240/275 (87.27%), Postives = 254/275 (92.36%), Query Frame = 0
BLAST of Chy4G086120 vs. NCBI nr
Match: XP_031737878.1 (secoisolariciresinol dehydrogenase isoform X2 [Cucumis sativus]) HSP 1 Score: 480 bits (1236), Expect = 9.92e-169 Identity = 239/263 (90.87%), Postives = 249/263 (94.68%), Query Frame = 0
BLAST of Chy4G086120 vs. NCBI nr
Match: XP_008442883.1 (PREDICTED: secoisolariciresinol dehydrogenase-like [Cucumis melo] >KAA0043844.1 secoisolariciresinol dehydrogenase-like [Cucumis melo var. makuwa] >TYK25290.1 secoisolariciresinol dehydrogenase-like [Cucumis melo var. makuwa]) HSP 1 Score: 476 bits (1224), Expect = 6.91e-167 Identity = 235/272 (86.40%), Postives = 254/272 (93.38%), Query Frame = 0
BLAST of Chy4G086120 vs. TAIR 10
Match: AT1G52340.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 255.0 bits (650), Expect = 8.6e-68 Identity = 132/269 (49.07%), Postives = 177/269 (65.80%), Query Frame = 0
BLAST of Chy4G086120 vs. TAIR 10
Match: AT3G51680.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 246.5 bits (628), Expect = 3.1e-65 Identity = 136/263 (51.71%), Postives = 175/263 (66.54%), Query Frame = 0
BLAST of Chy4G086120 vs. TAIR 10
Match: AT2G47140.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 243.8 bits (621), Expect = 2.0e-64 Identity = 127/255 (49.80%), Postives = 179/255 (70.20%), Query Frame = 0
BLAST of Chy4G086120 vs. TAIR 10
Match: AT2G47120.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 241.1 bits (614), Expect = 1.3e-63 Identity = 126/256 (49.22%), Postives = 182/256 (71.09%), Query Frame = 0
BLAST of Chy4G086120 vs. TAIR 10
Match: AT3G29250.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 238.4 bits (607), Expect = 8.3e-63 Identity = 126/253 (49.80%), Postives = 176/253 (69.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|