Chy4G086060 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G086060
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	chrH04: 24974376 .. 24975230 (-)
RNA-Seq Expression	Chy4G086060
Synteny	Chy4G086060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCCCACAAACTCACTTAACATTTTCTCAACTTCCTCCGCCTTCCTCCGCCGCCAATCACCGCCCTCTGATTTTTTTCAATACCTCAAGGTATATATCCAAATGCATATTGCTAAAAAAATTTCAACTTCTGTTTTTTCTTTCTCCCTTGCTCTTTTAAGGAAAATCTATGAATTGGGTTTTCTTTTTTCTTTCCAAAGTTTATAAATTTAAATGGTTTTAAAGTTTTAAAATTTTAAAATTTCCCATAAGTAGATTATTATATGAAAATGGAGAAAACGACATTACAAGATTCAAGTTCTAACTCAACCTCTGTTTTTTTTTTCTTTCTAATATAATTATTTAACCTTCTAAAACAGGGGAGGAAATCCCATTTTCTTTTTCCTTCCATTATTCTCATATAATTTAGCTCAATTTGAGTGTGTTTAATTCTAATTAATTAATCTTCTTTTCTAACTTAACAGAGTAGGAAAAAAAAAGTAGGAGACAATGAGCAGAAGAAGCAGTGGAAGTGTTCCAAAGCTTGAGTTGAAGTTGAACCTGTCGCCGCCACGACCACATCCATTGGTGTCATCGCCAAGCCGATCAGCGACGGTTTCGCCAACATCGCCGCCGAGTTCTTGCGTGTCGTCGGAGCTAAATCAGGACGACGGTGGGGCGGGTTTACGATATTCAAGCAGCCCGGAAGCAACATCAATGGTGCTGGTGGGGTGCCCTCGTTGCCTAATGTACGTGATGCTGTCGGAGAATGAACCCAAATGCCCAAAATGCAAGAGCTCTGTTTTGCTTGATTTTCTTCATGACGGCGCCGCCTCAGCTCCGCCGTCCACGACAGCAGGCAGGAAGATCTAA

mRNA sequence

ATGTTTCCCACAAACTCACTTAACATTTTCTCAACTTCCTCCGCCTTCCTCCGCCGCCAATCACCGCCCTCTGATTTTTTTCAATACCTCAAGGAGACAATGAGCAGAAGAAGCAGTGGAAGTGTTCCAAAGCTTGAGTTGAAGTTGAACCTGTCGCCGCCACGACCACATCCATTGGTGTCATCGCCAAGCCGATCAGCGACGGTTTCGCCAACATCGCCGCCGAGTTCTTGCGTGTCGTCGGAGCTAAATCAGGACGACGGTGGGGCGGGTTTACGATATTCAAGCAGCCCGGAAGCAACATCAATGGTGCTGGTGGGGTGCCCTCGTTGCCTAATGTACGTGATGCTGTCGGAGAATGAACCCAAATGCCCAAAATGCAAGAGCTCTGTTTTGCTTGATTTTCTTCATGACGGCGCCGCCTCAGCTCCGCCGTCCACGACAGCAGGCAGGAAGATCTAA

Coding sequence (CDS)

ATGTTTCCCACAAACTCACTTAACATTTTCTCAACTTCCTCCGCCTTCCTCCGCCGCCAATCACCGCCCTCTGATTTTTTTCAATACCTCAAGGAGACAATGAGCAGAAGAAGCAGTGGAAGTGTTCCAAAGCTTGAGTTGAAGTTGAACCTGTCGCCGCCACGACCACATCCATTGGTGTCATCGCCAAGCCGATCAGCGACGGTTTCGCCAACATCGCCGCCGAGTTCTTGCGTGTCGTCGGAGCTAAATCAGGACGACGGTGGGGCGGGTTTACGATATTCAAGCAGCCCGGAAGCAACATCAATGGTGCTGGTGGGGTGCCCTCGTTGCCTAATGTACGTGATGCTGTCGGAGAATGAACCCAAATGCCCAAAATGCAAGAGCTCTGTTTTGCTTGATTTTCTTCATGACGGCGCCGCCTCAGCTCCGCCGTCCACGACAGCAGGCAGGAAGATCTAA

Protein sequence

MFPTNSLNIFSTSSAFLRRQSPPSDFFQYLKETMSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRKI*

Homology

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BLAST of Chy4G086060 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.0e-36
Identity = 87/124 (70.16%), Postives = 98/124 (79.03%), Query Frame = 0


Query: 34  MSRRSSGSVPKLELKLNLSPP--RPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAG 93
           MSRRS    PKLELKLNLSPP      +V SPSRSAT SPTSPPSSCVSSE+NQD+    
Sbjct: 1   MSRRS----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE--PS 60

Query: 94  LRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTA-- 153
           +RYS+SPE TSMVLVGCPRCLMYVMLSE++PKCPKCKS+VLLDFLH+ A +A  +  A  
Sbjct: 61  VRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAAS 118

[Close]

BLAST of Chy4G086060 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24
Identity = 66/119 (55.46%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 34  MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 93
           MSRR+    PKLEL+LNLSPP       S  RS   S T+ PSSCVSSE NQ++      
Sbjct: 1   MSRRNKNG-PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEE------ 60

Query: 94  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRK 153
              +   TSMVLVGCPRCLMYVMLS+++PKCPKCKS+VLLDFL + A +A  +T A  +
Sbjct: 61  ---NETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTATAANTR 109

[Close]

BLAST of Chy4G086060 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.8e-10
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 45  LELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLRYSSSPEATSMV 104
           L+LKLN+SP     L++  S S+  S              + +GG G       EA SMV
Sbjct: 11  LDLKLNISPSLDSSLLTESSSSSLCS-------------EEAEGGGG-------EAKSMV 70

Query: 105 LVGCPRCLMYVMLS-ENEPKCPKCKSSVLLDFL 137
           +VGCP C+MY++ S EN+P+CP+C S VLLDFL
Sbjct: 71  VVGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of Chy4G086060 vs. ExPASy TrEMBL
Match: A0A0A0LBI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.7e-58
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 34  MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 93
           MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 60

Query: 94  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRKI 153
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTA RKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of Chy4G086060 vs. ExPASy TrEMBL
Match: A0A5A7TLW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23737G00010 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.2e-58
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 34  MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 93
           MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGA LR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 94  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRKI 153
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTA RKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of Chy4G086060 vs. ExPASy TrEMBL
Match: A0A1S3B7J8 (uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 8.2e-58
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 34  MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 93
           MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGA LR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 94  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRKI 153
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTA RKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of Chy4G086060 vs. ExPASy TrEMBL
Match: A0A6J1J6Y2 (uncharacterized protein LOC111481787 OS=Cucurbita maxima OX=3661 GN=LOC111481787 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.1e-54
Identity = 123/156 (78.85%), Postives = 127/156 (81.41%), Query Frame = 0


Query: 1   MFPTNSLNIFSTSSAFLRRQSPPSDFFQYLK---ETMSRRSSGSVPKLELKLNLSPPRPH 60
           MF TNSL    T S      SPPS F  + +   E MSRRSSGSVPKL+LKLNLSPPR H
Sbjct: 1   MFTTNSL----TFSHPPPPPSPPSSFQNFKRLEEEKMSRRSSGSVPKLDLKLNLSPPRQH 60

Query: 61  PLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLRYSSSPEATSMVLVGCPRCLMYVML 120
           PL SSPSRSAT+SPTSPPSSCVS ELNQDD  A LRYSSSPEATSMVLVGCPRCLMYVML
Sbjct: 61  PLGSSPSRSATLSPTSPPSSCVSLELNQDDSSAALRYSSSPEATSMVLVGCPRCLMYVML 120

Query: 121 SENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRKI 154
           SENEPKCPKCKSSVLLDFLHDGAAS PPST A RKI
Sbjct: 121 SENEPKCPKCKSSVLLDFLHDGAASGPPSTAAARKI 152

[Close]

BLAST of Chy4G086060 vs. ExPASy TrEMBL
Match: A0A6J1F871 (uncharacterized protein LOC111441745 OS=Cucurbita moschata OX=3662 GN=LOC111441745 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.3e-52
Identity = 109/120 (90.83%), Postives = 111/120 (92.50%), Query Frame = 0


Query: 34  MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 93
           MSRRSSGSVPKLELKLNLSPPR HPL SSPSRSAT+SPTSPPSSCVS ELNQDD  A LR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRQHPLGSSPSRSATLSPTSPPSSCVSLELNQDDSSAALR 60

Query: 94  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRKI 153
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAAS PPST A RK+
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASGPPSTAAARKL 120

[Close]

BLAST of Chy4G086060 vs. NCBI nr
Match: XP_031737841.1 (uncharacterized protein LOC101204832 [Cucumis sativus] >KGN59178.1 hypothetical protein Csa_000798 [Cucumis sativus])

HSP 1 Score: 235 bits (600), Expect = 2.30e-77
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 34  MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 93
           MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 60

Query: 94  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRKI 153
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTA RKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of Chy4G086060 vs. NCBI nr
Match: XP_008442891.1 (PREDICTED: uncharacterized protein LOC103486655 [Cucumis melo] >KAA0043838.1 uncharacterized protein E6C27_scaffold236G001730 [Cucumis melo var. makuwa] >TYK04712.1 uncharacterized protein E5676_scaffold23737G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 233 bits (594), Expect = 1.89e-76
Identity = 118/120 (98.33%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 34  MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 93
           MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGA LR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 94  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRKI 153
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTA RKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of Chy4G086060 vs. NCBI nr
Match: XP_038905681.1 (uncharacterized protein LOC120091651 [Benincasa hispida])

HSP 1 Score: 227 bits (579), Expect = 3.65e-74
Identity = 115/120 (95.83%), Postives = 115/120 (95.83%), Query Frame = 0


Query: 34  MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 93
           MSRRSSGSVPKLELKLNLSPPRPHPL SSPSRSATVSPTSPPSSCVSSELNQDDGGA LR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLASSPSRSATVSPTSPPSSCVSSELNQDDGGASLR 60

Query: 94  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRKI 153
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPS  A RKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSRAAARKI 120

[Close]

BLAST of Chy4G086060 vs. NCBI nr
Match: XP_023528090.1 (early nodulin-20-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224 bits (571), Expect = 1.74e-72
Identity = 126/156 (80.77%), Postives = 130/156 (83.33%), Query Frame = 0


Query: 1   MFPTNSLNIFSTSSAFLRRQSPPSDF--FQYLKET-MSRRSSGSVPKLELKLNLSPPRPH 60
           MF TNSL    T S      SPPS F  F+ L+E  MSRRSSGSVPKLELKLNLSPPR H
Sbjct: 1   MFATNSL----TFSHPPPPPSPPSAFQHFKVLEEEKMSRRSSGSVPKLELKLNLSPPRQH 60

Query: 61  PLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLRYSSSPEATSMVLVGCPRCLMYVML 120
           PL SSPSRSAT+SPTSPPSSCVS ELNQDD GA LRYSSSPEATSMVLVGCPRCLMYVML
Sbjct: 61  PLGSSPSRSATLSPTSPPSSCVSLELNQDDSGAALRYSSSPEATSMVLVGCPRCLMYVML 120

Query: 121 SENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRKI 153
           SENEPKCPKCKSSVLLDFLHDGAAS PPST A RK+
Sbjct: 121 SENEPKCPKCKSSVLLDFLHDGAASGPPSTGAARKM 152

[Close]

BLAST of Chy4G086060 vs. NCBI nr
Match: XP_023528091.1 (uncharacterized protein LOC111791110 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224 bits (571), Expect = 1.74e-72
Identity = 126/156 (80.77%), Postives = 130/156 (83.33%), Query Frame = 0


Query: 1   MFPTNSLNIFSTSSAFLRRQSPPSDF--FQYLKET-MSRRSSGSVPKLELKLNLSPPRPH 60
           MF TNSL    T S      SPPS F  F+ L+E  MSRRSSGSVPKLELKLNLSPPR H
Sbjct: 1   MFATNSL----TFSHPPPPPSPPSAFQHFKXLEEEKMSRRSSGSVPKLELKLNLSPPRQH 60

Query: 61  PLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLRYSSSPEATSMVLVGCPRCLMYVML 120
           PL SSPSRSAT+SPTSPPSSCVS ELNQDD GA LRYSSSPEATSMVLVGCPRCLMYVML
Sbjct: 61  PLGSSPSRSATLSPTSPPSSCVSLELNQDDSGAALRYSSSPEATSMVLVGCPRCLMYVML 120

Query: 121 SENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRKI 153
           SENEPKCPKCKSSVLLDFLHDGAAS PPST A RK+
Sbjct: 121 SENEPKCPKCKSSVLLDFLHDGAASGPPSTGAARKM 152

[Close]

BLAST of Chy4G086060 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 154.5 bits (389), Expect = 7.1e-38
Identity = 87/124 (70.16%), Postives = 98/124 (79.03%), Query Frame = 0


Query: 34  MSRRSSGSVPKLELKLNLSPP--RPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAG 93
           MSRRS    PKLELKLNLSPP      +V SPSRSAT SPTSPPSSCVSSE+NQD+    
Sbjct: 1   MSRRS----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE--PS 60

Query: 94  LRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTA-- 153
           +RYS+SPE TSMVLVGCPRCLMYVMLSE++PKCPKCKS+VLLDFLH+ A +A  +  A  
Sbjct: 61  VRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAAS 118

[Close]

BLAST of Chy4G086060 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 1.4e-25
Identity = 66/119 (55.46%), Postives = 80/119 (67.23%), Query Frame = 0


Query: 34  MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 93
           MSRR+    PKLEL+LNLSPP       S  RS   S T+ PSSCVSSE NQ++      
Sbjct: 1   MSRRNKNG-PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEE------ 60

Query: 94  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAGRK 153
              +   TSMVLVGCPRCLMYVMLS+++PKCPKCKS+VLLDFL + A +A  +T A  +
Sbjct: 61  ---NETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTATAANTR 109

[Close]

BLAST of Chy4G086060 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.6 bits (161), Expect = 2.0e-11
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 0


Query: 45  LELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLRYSSSPEATSMV 104
           L+LKLN+SP     L++  S S+  S              + +GG G       EA SMV
Sbjct: 11  LDLKLNISPSLDSSLLTESSSSSLCS-------------EEAEGGGG-------EAKSMV 70

Query: 105 LVGCPRCLMYVMLS-ENEPKCPKCKSSVLLDFL 137
           +VGCP C+MY++ S EN+P+CP+C S VLLDFL
Sbjct: 71  VVGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of Chy4G086060 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 6.1e-05
Identity = 44/127 (34.65%), Postives = 59/127 (46.46%), Query Frame = 0


Query: 22  PPSDFFQYLKETMSRRSSGSVPKLELKL---NLSPPRPHPLVS-SPSRSATVSPTSPPSS 81
           P SD F   K  +S         LELKL   ++S P P PL S SP++S +   +     
Sbjct: 120 PISDKFP-AKPLLSLFDDDDDTSLELKLVPSSISRPLPPPLSSFSPNQSLSYLSSVCTLD 179

Query: 82  CVSSELNQ-----------DDGGAGLRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPK 134
            V   L +           +D G     +S+  A S V  GCP CL YV +++N PKCP+
Sbjct: 180 KVKLALERAEKDTKKRQSPEDDGVYDGTASATVAASQVAAGCPGCLSYVFVAKNNPKCPR 239

[Close]

BLAST of Chy4G086060 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 8.0e-05
Identity = 24/73 (32.88%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 65  RSATVSPTSPPSSCV--SSELNQDDGGAGLRYSSSPEATSMVLVGCPRCLMYVMLSENEP 124
           RS +   +S  +SC+  + E+ ++   + +    +PE   MV++GC  C+MYVM+ +   
Sbjct: 30  RSPSSDTSSSQNSCLTRTEEVKEEVASSWVDEEEAPE---MVVMGCRSCMMYVMVLQERQ 89

Query: 125 KCPKCKSSVLLDF 136
           +CPKCK + L+ F
Sbjct: 90  RCPKCKCTDLIFF 99

The following BLAST results are available for this feature:

BLAST of Chy4G086060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	1.0e-36	70.16	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	2.0e-24	55.46	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FMS4	2.8e-10	43.01	Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of Chy4G086060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBI1	1.7e-58	99.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1	[more]
A0A5A7TLW3	8.2e-58	98.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B7J8	8.2e-58	98.33	uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=...	[more]
A0A6J1J6Y2	1.1e-54	78.85	uncharacterized protein LOC111481787 OS=Cucurbita maxima OX=3661 GN=LOC111481787...	[more]
A0A6J1F871	2.3e-52	90.83	uncharacterized protein LOC111441745 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]

BLAST of Chy4G086060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737841.1	2.30e-77	99.17	uncharacterized protein LOC101204832 [Cucumis sativus] >KGN59178.1 hypothetical ...	[more]
XP_008442891.1	1.89e-76	98.33	PREDICTED: uncharacterized protein LOC103486655 [Cucumis melo] >KAA0043838.1 unc...	[more]
XP_038905681.1	3.65e-74	95.83	uncharacterized protein LOC120091651 [Benincasa hispida]	[more]
XP_023528090.1	1.74e-72	80.77	early nodulin-20-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023528091.1	1.74e-72	80.77	uncharacterized protein LOC111791110 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy4G086060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	7.1e-38	70.16	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	1.4e-25	55.46	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G22270.1	2.0e-11	43.01	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16500.1	6.1e-05	34.65	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52561.1	8.0e-05	32.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..96
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 29..152
None	No IPR available	PANTHER	PTHR33177:SF47	BNAC02G02040D PROTEIN	coord: 29..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G086060.1	Chy4G086060.1	mRNA