Chy4G085700 (gene) Cucumber (hystrix) v1

Overview
NameChy4G085700
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH04: 24707314 .. 24707478 (+)
RNA-Seq ExpressionChy4G085700
SyntenyChy4G085700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAAGCAAATCTCCTAGCCGGATCAACGAGTCAGTTGGTGCTAATTGCAATTACACCAGTAAAATTCACCGGCGGCAGCGGCAATGGAGAATTGGAGGAAACTGCCGCGTTGGAACTGAGACGGAAACAATTCTGGGGTGATGTTGGGATGGACTACTGA

mRNA sequence

ATGGCGGAAGCAAATCTCCTAGCCGGATCAACGAGTCAGTTGGTGCTAATTGCAATTACACCAGTAAAATTCACCGGCGGCAGCGGCAATGGAGAATTGGAGGAAACTGCCGCGTTGGAACTGAGACGGAAACAATTCTGGGGTGATGTTGGGATGGACTACTGA

Coding sequence (CDS)

ATGGCGGAAGCAAATCTCCTAGCCGGATCAACGAGTCAGTTGGTGCTAATTGCAATTACACCAGTAAAATTCACCGGCGGCAGCGGCAATGGAGAATTGGAGGAAACTGCCGCGTTGGAACTGAGACGGAAACAATTCTGGGGTGATGTTGGGATGGACTACTGA

Protein sequence

MAEANLLAGSTSQLVLIAITPVKFTGGSGNGELEETAALELRRKQFWGDVGMDY*
Homology
[Close]
BLAST of Chy4G085700 vs. ExPASy TrEMBL
Match: A0A0A0LE70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782665 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 8.6e-18
Identity = 49/54 (90.74%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 1  MAEANLLAGSTSQLVLIAITPVKFTGGSGNGELEETAALELRRKQFWGDVGMDY 55
          MAEANL AGSTSQLVLIA TPVKFTGGSGNG+LE TAALELRRKQFWG VGMDY
Sbjct: 1  MAEANLPAGSTSQLVLIASTPVKFTGGSGNGKLEGTAALELRRKQFWGGVGMDY 54

[Close]
BLAST of Chy4G085700 vs. NCBI nr
Match: KGN59219.1 (hypothetical protein Csa_001176 [Cucumis sativus])

HSP 1 Score: 99.4 bits (246), Expect = 5.66e-26
Identity = 49/54 (90.74%), Postives = 50/54 (92.59%), Query Frame = 0 

Query: 1  MAEANLLAGSTSQLVLIAITPVKFTGGSGNGELEETAALELRRKQFWGDVGMDY 54
          MAEANL AGSTSQLVLIA TPVKFTGGSGNG+LE TAALELRRKQFWG VGMDY
Sbjct: 1  MAEANLPAGSTSQLVLIASTPVKFTGGSGNGKLEGTAALELRRKQFWGGVGMDY 54

The following BLAST results are available for this feature:
BLAST of Chy4G085700 vs.
Match NameE-valueIdentityDescription
BLAST of Chy4G085700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LE708.6e-1890.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G782665 PE=4 SV=1[more]
BLAST of Chy4G085700 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59219.15.66e-2690.74hypothetical protein Csa_001176 [Cucumis sativus][more]
BLAST of Chy4G085700 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G085700.1Chy4G085700.1mRNA