Chy4G085190 (gene) Cucumber (hystrix) v1

Overview
NameChy4G085190
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description60S ribosomal protein L21
LocationchrH04: 24283054 .. 24283290 (-)
RNA-Seq ExpressionChy4G085190
SyntenyChy4G085190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGGCCGGCCATGGACTTCGTTCCCGTACCAGAGACCTCTTCGCCAGGCCTTTCAGGAAGAAGGGTTACATTGCTTTGACTACCTACTTGAGGACGTACAAAATCGGTGATTATGTGGATATCAAGGTGAACGGCGCCGTCCACAAGGGTATGCCTCATAAATTTTACCATGGTCGCACAGGTCAGGTATGGAATGTGACAAAGCGCGCCATCGGCGTTGAGATCAACAAGCAG

mRNA sequence

ATGCCGGCCGGCCATGGACTTCGTTCCCGTACCAGAGACCTCTTCGCCAGGCCTTTCAGGAAGAAGGGTTACATTGCTTTGACTACCTACTTGAGGACGTACAAAATCGGTGATTATGTGGATATCAAGGTGAACGGCGCCGTCCACAAGGGTATGCCTCATAAATTTTACCATGGTCGCACAGGTCAGGTATGGAATGTGACAAAGCGCGCCATCGGCGTTGAGATCAACAAGCAG

Coding sequence (CDS)

ATGCCGGCCGGCCATGGACTTCGTTCCCGTACCAGAGACCTCTTCGCCAGGCCTTTCAGGAAGAAGGGTTACATTGCTTTGACTACCTACTTGAGGACGTACAAAATCGGTGATTATGTGGATATCAAGGTGAACGGCGCCGTCCACAAGGGTATGCCTCATAAATTTTACCATGGTCGCACAGGTCAGGTATGGAATGTGACAAAGCGCGCCATCGGCGTTGAGATCAACAAGCAG

Protein sequence

MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGRTGQVWNVTKRAIGVEINKQ
Homology
[Close]
BLAST of Chy4G085190 vs. ExPASy Swiss-Prot
Match: Q43291 (60S ribosomal protein L21-1 OS=Arabidopsis thaliana OX=3702 GN=RPL21A PE=2 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 2.1e-38
Identity = 67/79 (84.81%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1  MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TG++WNVTKRA+GVE+NKQ
Sbjct: 61 TGRIWNVTKRAVGVEVNKQ 79

[Close]
BLAST of Chy4G085190 vs. ExPASy Swiss-Prot
Match: Q9FDZ9 (60S ribosomal protein L21-2 OS=Arabidopsis thaliana OX=3702 GN=RPL21E PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.1e-38
Identity = 67/79 (84.81%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1  MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TG++WNVTKRA+GVE+NKQ
Sbjct: 61 TGRIWNVTKRAVGVEVNKQ 79

[Close]
BLAST of Chy4G085190 vs. ExPASy Swiss-Prot
Match: Q54X53 (60S ribosomal protein L21 OS=Dictyostelium discoideum OX=44689 GN=rpl21 PE=3 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 6.3e-27
Identity = 54/79 (68.35%), Postives = 64/79 (81.01%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MP   GLR+RTR LF+R FR  G +  TT+LRT+++GDYVDIK  G VHKGMPHKFYHGR
Sbjct: 1  MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TG+VWNVT RA+GV INK+
Sbjct: 61 TGRVWNVTPRAVGVIINKR 79

[Close]
BLAST of Chy4G085190 vs. ExPASy Swiss-Prot
Match: O82574 (60S ribosomal protein L21 OS=Cyanophora paradoxa OX=2762 GN=RPL21 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 2.0e-25
Identity = 53/79 (67.09%), Postives = 63/79 (79.75%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MP  +G R+RTR LFAR F+  G + L+TYL  +KIG+YVD+  N AVHKGMP K+YHGR
Sbjct: 1  MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TG VWNVTKRAIGVEINK+
Sbjct: 61 TGIVWNVTKRAIGVEINKR 79

[Close]
BLAST of Chy4G085190 vs. ExPASy Swiss-Prot
Match: Q9UUC1 (60S ribosomal protein L21-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl2101 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 8.5e-24
Identity = 50/78 (64.10%), Postives = 63/78 (80.77%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MP  +G+R+RTR  F R FR+ G I L+TYL+TYK+GD VDIKVNGAV KGMPHK+YHG+
Sbjct: 1  MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60

Query: 61 TGQVWNVTKRAIGVEINK 79
          TG V+NVT+ ++GV I K
Sbjct: 61 TGVVYNVTQSSVGVLIYK 78

[Close]
BLAST of Chy4G085190 vs. ExPASy TrEMBL
Match: A0A0A0LEZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G797610 PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.4e-39
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TGQVWNVTKRAIGVEINKQ
Sbjct: 61 TGQVWNVTKRAIGVEINKQ 79

[Close]
BLAST of Chy4G085190 vs. ExPASy TrEMBL
Match: A0A5D3DP20 (60S ribosomal protein L21-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005180 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.8e-39
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TG+VWNVTKRAIGVEINKQ
Sbjct: 61 TGRVWNVTKRAIGVEINKQ 79

[Close]
BLAST of Chy4G085190 vs. ExPASy TrEMBL
Match: A0A6J1DB74 (60S ribosomal protein L21-2 OS=Momordica charantia OX=3673 GN=LOC111019384 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.8e-39
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TG+VWNVTKRAIGVEINKQ
Sbjct: 61 TGRVWNVTKRAIGVEINKQ 79

[Close]
BLAST of Chy4G085190 vs. ExPASy TrEMBL
Match: A0A1S3B7V0 (60S ribosomal protein L21-1 OS=Cucumis melo OX=3656 GN=LOC103486741 PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.8e-39
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TG+VWNVTKRAIGVEINKQ
Sbjct: 61 TGRVWNVTKRAIGVEINKQ 79

[Close]
BLAST of Chy4G085190 vs. ExPASy TrEMBL
Match: A0A6J1KU90 (60S ribosomal protein L21-2-like OS=Cucurbita maxima OX=3661 GN=LOC111498718 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.3e-38
Identity = 77/79 (97.47%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGA+HKGMPHKFYHGR
Sbjct: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAIHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TG+VWNVTKRAIGVEINKQ
Sbjct: 61 TGRVWNVTKRAIGVEINKQ 79

[Close]
BLAST of Chy4G085190 vs. NCBI nr
Match: XP_004140433.3 (60S ribosomal protein L21-1 [Cucumis sativus] >XP_031737611.1 60S ribosomal protein L21-1-like [Cucumis sativus])

HSP 1 Score: 169 bits (429), Expect = 5.08e-52
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 79
          TGQVWNVTKRAIGVEINKQ
Sbjct: 61 TGQVWNVTKRAIGVEINKQ 79

[Close]
BLAST of Chy4G085190 vs. NCBI nr
Match: XP_031739289.1 (60S ribosomal protein L21-1 [Cucumis sativus] >XP_031739303.1 60S ribosomal protein L21-1 [Cucumis sativus] >XP_031745254.1 60S ribosomal protein L21-1 [Cucumis sativus] >KAE8651128.1 hypothetical protein Csa_001407 [Cucumis sativus] >KGN43674.2 hypothetical protein Csa_017109 [Cucumis sativus])

HSP 1 Score: 169 bits (429), Expect = 5.08e-52
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 79
          TGQVWNVTKRAIGVEINKQ
Sbjct: 61 TGQVWNVTKRAIGVEINKQ 79

[Close]
BLAST of Chy4G085190 vs. NCBI nr
Match: AQK65186.1 (60S ribosomal protein L21-1 [Zea mays])

HSP 1 Score: 166 bits (419), Expect = 1.67e-51
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHGLRSRTRDLFARPFRKKGYI LTTYLRTYKIGDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1  MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 79
          TG+VWNVTKRAIGVEINKQ
Sbjct: 61 TGRVWNVTKRAIGVEINKQ 79

[Close]
BLAST of Chy4G085190 vs. NCBI nr
Match: KAG8088638.1 (hypothetical protein GUJ93_ZPchr0010g8513 [Zizania palustris])

HSP 1 Score: 165 bits (418), Expect = 1.81e-51
Identity = 75/79 (94.94%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHGLRSRTRDLFARPFRKKGYI LTTYLRTYK+GDYVD+KVNGAVHKGMPHKFYHGR
Sbjct: 1  MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 79
          TG+VWNVTKRAIGVEINKQ
Sbjct: 61 TGRVWNVTKRAIGVEINKQ 79

[Close]
BLAST of Chy4G085190 vs. NCBI nr
Match: XP_022151455.1 (60S ribosomal protein L21-2 [Momordica charantia])

HSP 1 Score: 168 bits (425), Expect = 2.07e-51
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR
Sbjct: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 79
          TG+VWNVTKRAIGVEINKQ
Sbjct: 61 TGRVWNVTKRAIGVEINKQ 79

[Close]
BLAST of Chy4G085190 vs. TAIR 10
Match: AT1G09590.1 (Translation protein SH3-like family protein )

HSP 1 Score: 159.1 bits (401), Expect = 1.5e-39
Identity = 67/79 (84.81%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1  MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TG++WNVTKRA+GVE+NKQ
Sbjct: 61 TGRIWNVTKRAVGVEVNKQ 79

[Close]
BLAST of Chy4G085190 vs. TAIR 10
Match: AT1G09690.1 (Translation protein SH3-like family protein )

HSP 1 Score: 159.1 bits (401), Expect = 1.5e-39
Identity = 67/79 (84.81%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1  MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TG++WNVTKRA+GVE+NKQ
Sbjct: 61 TGRIWNVTKRAVGVEVNKQ 79

[Close]
BLAST of Chy4G085190 vs. TAIR 10
Match: AT1G57660.1 (Translation protein SH3-like family protein )

HSP 1 Score: 159.1 bits (401), Expect = 1.5e-39
Identity = 67/79 (84.81%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1  MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TG++WNVTKRA+GVE+NKQ
Sbjct: 61 TGRIWNVTKRAVGVEVNKQ 79

[Close]
BLAST of Chy4G085190 vs. TAIR 10
Match: AT1G57860.1 (Translation protein SH3-like family protein )

HSP 1 Score: 159.1 bits (401), Expect = 1.5e-39
Identity = 67/79 (84.81%), Postives = 78/79 (98.73%), Query Frame = 0 

Query: 1  MPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKIGDYVDIKVNGAVHKGMPHKFYHGR 60
          MPAGHG+R+RTRDLFARPFRKKGYI L+TYLRT+K+GDYVD+KVNGA+HKGMPHKFYHGR
Sbjct: 1  MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60

Query: 61 TGQVWNVTKRAIGVEINKQ 80
          TG++WNVTKRA+GVE+NKQ
Sbjct: 61 TGRIWNVTKRAVGVEVNKQ 79

The following BLAST results are available for this feature:
BLAST of Chy4G085190 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q432912.1e-3884.8160S ribosomal protein L21-1 OS=Arabidopsis thaliana OX=3702 GN=RPL21A PE=2 SV=2[more]
Q9FDZ92.1e-3884.8160S ribosomal protein L21-2 OS=Arabidopsis thaliana OX=3702 GN=RPL21E PE=2 SV=1[more]
Q54X536.3e-2768.3560S ribosomal protein L21 OS=Dictyostelium discoideum OX=44689 GN=rpl21 PE=3 SV=... [more]
O825742.0e-2567.0960S ribosomal protein L21 OS=Cyanophora paradoxa OX=2762 GN=RPL21 PE=2 SV=1[more]
Q9UUC18.5e-2464.1060S ribosomal protein L21-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484... [more]
BLAST of Chy4G085190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEZ03.4e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G797610 PE=3 SV=1[more]
A0A5D3DP209.8e-3998.7360S ribosomal protein L21-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A6J1DB749.8e-3998.7360S ribosomal protein L21-2 OS=Momordica charantia OX=3673 GN=LOC111019384 PE=3 ... [more]
A0A1S3B7V09.8e-3998.7360S ribosomal protein L21-1 OS=Cucumis melo OX=3656 GN=LOC103486741 PE=3 SV=1[more]
A0A6J1KU901.3e-3897.4760S ribosomal protein L21-2-like OS=Cucurbita maxima OX=3661 GN=LOC111498718 PE=... [more]
BLAST of Chy4G085190 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004140433.35.08e-52100.0060S ribosomal protein L21-1 [Cucumis sativus] >XP_031737611.1 60S ribosomal prot... [more]
XP_031739289.15.08e-52100.0060S ribosomal protein L21-1 [Cucumis sativus] >XP_031739303.1 60S ribosomal prot... [more]
AQK65186.11.67e-5196.2060S ribosomal protein L21-1 [Zea mays][more]
KAG8088638.11.81e-5194.94hypothetical protein GUJ93_ZPchr0010g8513 [Zizania palustris][more]
XP_022151455.12.07e-5198.7360S ribosomal protein L21-2 [Momordica charantia][more]
BLAST of Chy4G085190 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G09590.11.5e-3984.81Translation protein SH3-like family protein [more]
AT1G09690.11.5e-3984.81Translation protein SH3-like family protein [more]
AT1G57660.11.5e-3984.81Translation protein SH3-like family protein [more]
AT1G57860.11.5e-3984.81Translation protein SH3-like family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036948Ribosomal protein L21 superfamilyGENE3D2.30.30.70Ribosomal protein L21coord: 1..79
e-value: 4.9E-37
score: 127.9
IPR001147Ribosomal protein L21ePFAMPF01157Ribosomal_L21ecoord: 1..79
e-value: 1.0E-35
score: 121.6
IPR001147Ribosomal protein L21ePANTHERPTHR2098160S RIBOSOMAL PROTEIN L21coord: 1..79
NoneNo IPR availablePANTHERPTHR20981:SF1960S RIBOSOMAL PROTEIN L21-1coord: 1..79
IPR018259Ribosomal protein L21e, conserved sitePROSITEPS01171RIBOSOMAL_L21Ecoord: 37..62
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 3..78

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G085190.1Chy4G085190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome