Chy4G084690 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G084690
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	zinc finger protein WIP2-like
Location	chrH04: 23886755 .. 23887688 (+)
RNA-Seq Expression	Chy4G084690
Synteny	Chy4G084690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTATCGCTAAGCCGAGTGATTTAGACATACATTTGATAATTCTTCGACTCACCCTTCTCTTTAGATTGAAAGTTCGAATCTATGCACCCATGTATTTTTCCATTTGATATTTTGATTCTTTTTCTTTGAACAAAATACTTAATGAACACATTCCTCACATTCTCAAGGTTGTTTCCATTAGTTTAAACTTTTAGATGTTCTGAATATGCATACTTACCTTTGTTATCCCAATGGTGTCAACCTAATTTAAATAGTCTGGTATAGCTACTAACATTTGTTATCTAAGTAGTTTCTTAAAAAAAAAAGGTCGTAATTTCCATTATTTTCACCTTCTCTCAAAATGAAAGGTTCAAACTTTAACTCAAATTTTCAGAACAAATTAATAATCAAACAAGACCTAGCTAAGTCATTTTGGTTTTTTTCTTTGTTTCGATATAGATGCACATGTGGGGGCATGGGTCACAGTACAGGAGAGGACCAGAATCGTTAAGAGGAACACAACCAACAGGGATGTTAAGGCTGCCATGTTATTGCTGTTCACCAGGTTGTCGCAACAACATTGACCATCCAAGAGCAAAGCCCTTAAAAGACTTTAGAACACTGCAAACTCATTACAAACGGAAGCATGGAATCAAGCCTTTTATGTGTAGGAAATGTGGGAAAGCCTTTGCTGTTAGAGGAGATTGGAGAACTCATGAGAAGAATTGTGGAAAGCTTTGGTATTGCATTTGTGGCTCTGATTTTAAGCACAAAAGATCACTTAAAGACCATATCAAAGCCTTTGGTAATGGTCATGCTGCTTATAATCATAATAATAATAATAATAATAATCCTGATCTTCATCTTCATCGTCTTCATCGTCGTCGTCAACGGTTCGATAATGAAGAGGATGATCATGCTTATTCTGAAGTTGAGCAAGATCATGATTGA

mRNA sequence

ATGAGTATCGCTAAGCCGAGTGATTTAGACATACATTTGATAATTCTTCGACTCACCCTTCTCTTTAGATTGAAAGTTCGAATCTATGCACCCATATGTTCTGAATATGCATACTTACCTTTGTTATCCCAATGGTGTCAACCTAATTTAAATAGTCTGATGCACATGTGGGGGCATGGGTCACAGTACAGGAGAGGACCAGAATCGTTAAGAGGAACACAACCAACAGGGATGTTAAGGCTGCCATGTTATTGCTGTTCACCAGGTTGTCGCAACAACATTGACCATCCAAGAGCAAAGCCCTTAAAAGACTTTAGAACACTGCAAACTCATTACAAACGGAAGCATGGAATCAAGCCTTTTATGTGTAGGAAATGTGGGAAAGCCTTTGCTGTTAGAGGAGATTGGAGAACTCATGAGAAGAATTGTGGAAAGCTTTGGTATTGCATTTGTGGCTCTGATTTTAAGCACAAAAGATCACTTAAAGACCATATCAAAGCCTTTGGTAATGGTCATGCTGCTTATAATCATAATAATAATAATAATAATAATCCTGATCTTCATCTTCATCGTCTTCATCGTCGTCGTCAACGGTTCGATAATGAAGAGGATGATCATGCTTATTCTGAAGTTGAGCAAGATCATGATTGA

Coding sequence (CDS)

ATGAGTATCGCTAAGCCGAGTGATTTAGACATACATTTGATAATTCTTCGACTCACCCTTCTCTTTAGATTGAAAGTTCGAATCTATGCACCCATATGTTCTGAATATGCATACTTACCTTTGTTATCCCAATGGTGTCAACCTAATTTAAATAGTCTGATGCACATGTGGGGGCATGGGTCACAGTACAGGAGAGGACCAGAATCGTTAAGAGGAACACAACCAACAGGGATGTTAAGGCTGCCATGTTATTGCTGTTCACCAGGTTGTCGCAACAACATTGACCATCCAAGAGCAAAGCCCTTAAAAGACTTTAGAACACTGCAAACTCATTACAAACGGAAGCATGGAATCAAGCCTTTTATGTGTAGGAAATGTGGGAAAGCCTTTGCTGTTAGAGGAGATTGGAGAACTCATGAGAAGAATTGTGGAAAGCTTTGGTATTGCATTTGTGGCTCTGATTTTAAGCACAAAAGATCACTTAAAGACCATATCAAAGCCTTTGGTAATGGTCATGCTGCTTATAATCATAATAATAATAATAATAATAATCCTGATCTTCATCTTCATCGTCTTCATCGTCGTCGTCAACGGTTCGATAATGAAGAGGATGATCATGCTTATTCTGAAGTTGAGCAAGATCATGATTGA

Protein sequence

MSIAKPSDLDIHLIILRLTLLFRLKVRIYAPICSEYAYLPLLSQWCQPNLNSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHAAYNHNNNNNNNPDLHLHRLHRRRQRFDNEEDDHAYSEVEQDHD*

Homology

[Close]

BLAST of Chy4G084690 vs. ExPASy Swiss-Prot
Match: Q9SVY1 (Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 7.2e-73
Identity = 131/169 (77.51%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYR+GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQT
Sbjct: 231 NMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQT 290

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN
Sbjct: 291 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 350

Query: 171 GHAAYNHNNNNNNNPDLHLHRLHRRRQRFDNEEDDHAYSEVEQ---DHD 217
           GH AY  +                    FD  E+D   SEVEQ   DH+
Sbjct: 351 GHGAYGIDG-------------------FD--EEDEPASEVEQLDNDHE 378

[Close]

BLAST of Chy4G084690 vs. ExPASy Swiss-Prot
Match: Q8W030 (Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-68
Identity = 107/122 (87.70%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYR+GPESLRGTQPT ML+LPCYCC+PGC+NNIDHPRA+PLKDFRTLQT
Sbjct: 270 NMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQT 329

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHG++PF CR+CGKAFAV+GDWRTHEKNCGKLWYC CGSDFKHKRSLKDH+KAFGN
Sbjct: 330 HYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGN 389

Query: 171 GH 173
           GH
Sbjct: 390 GH 391

[Close]

BLAST of Chy4G084690 vs. ExPASy Swiss-Prot
Match: Q8W031 (Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.6e-67
Identity = 111/138 (80.43%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYR+GPESLRGTQPTGMLRLPC+CC+PGC+NNIDHPRAKPLKDFRTLQT
Sbjct: 192 NMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQT 251

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHG KPF CR CGKAFAV+GDWRTHEKNCGKLWYC CGSDFKHKRSLKDH+KAFGN
Sbjct: 252 HYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGN 311

Query: 171 GHAAYNHNNNNNNNPDLH 189
           GH     ++   ++ D +
Sbjct: 312 GHVPCGIDSFGGDHEDYY 329

[Close]

BLAST of Chy4G084690 vs. ExPASy Swiss-Prot
Match: Q8VWG3 (Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana OX=3702 GN=TT1 PE=1 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.6e-62
Identity = 100/125 (80.00%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYR+GPESL+GTQP  ML +PCYCC  GCRN+IDHPR+KPLKDFRTLQT
Sbjct: 159 NLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQT 218

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHG KPF CR CGK  AV+GDWRTHEKNCGK W C+CGSDFKHKRSLKDH+KAFG+
Sbjct: 219 HYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGS 278

Query: 171 GHAAY 176
           GH  Y
Sbjct: 279 GHGPY 283

[Close]

BLAST of Chy4G084690 vs. ExPASy Swiss-Prot
Match: Q9SGD1 (Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.8e-60
Identity = 97/126 (76.98%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGT-QPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQ 110
           N  MHMWGHGS++R+G +SL+GT QP  +LRLPCYCC+ GC+NNI+HPR+KPLKDFRTLQ
Sbjct: 194 NMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQ 253

Query: 111 THYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFG 170
           THYKRKHG KPF C KCGKA AV+GDWRTHEKNCGKLWYC CGSDFKHKRSLKDHI++FG
Sbjct: 254 THYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFG 313

Query: 171 NGHAAY 176
           +GH+ +
Sbjct: 314 SGHSPH 319

[Close]

BLAST of Chy4G084690 vs. ExPASy TrEMBL
Match: A0A1S3B791 (zinc finger protein WIP2-like OS=Cucumis melo OX=3656 GN=LOC103486795 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.1e-95
Identity = 163/168 (97.02%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT
Sbjct: 188 NMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 247

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN
Sbjct: 248 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 307

Query: 171 GHAAYNH--NNNNNNNPDLHLHRLHRRRQRFDNEEDDHAYSEVEQDHD 217
           GHAAYNH  NNNNNNNPDLHLHRLH RRQRFDNEEDDHAYSEVEQDHD
Sbjct: 308 GHAAYNHSSNNNNNNNPDLHLHRLHHRRQRFDNEEDDHAYSEVEQDHD 355

[Close]

BLAST of Chy4G084690 vs. ExPASy TrEMBL
Match: A0A5A7TQQ4 (Zinc finger protein WIP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G00320 PE=3 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.6e-94
Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 54  MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYK 113
           MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYK
Sbjct: 1   MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYK 60

Query: 114 RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHA 173
           RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHA
Sbjct: 61  RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHA 120

Query: 174 AYNH--NNNNNNNPDLHLHRLHRRRQRFDNEEDDHAYSEVEQDHD 217
           AYNH  NNNNNNNPDLHLHRLH RRQRFDNEEDDHAYSEVEQDHD
Sbjct: 121 AYNHSSNNNNNNNPDLHLHRLHHRRQRFDNEEDDHAYSEVEQDHD 165

[Close]

BLAST of Chy4G084690 vs. ExPASy TrEMBL
Match: A0A5D3DQ16 (Zinc finger protein WIP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005720 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.9e-94
Identity = 161/165 (97.58%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 54  MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYK 113
           MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYK
Sbjct: 1   MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYK 60

Query: 114 RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHA 173
           RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGK+WYCICGSDFKHKRSLKDHIKAFGNGHA
Sbjct: 61  RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKVWYCICGSDFKHKRSLKDHIKAFGNGHA 120

Query: 174 AYNH--NNNNNNNPDLHLHRLHRRRQRFDNEEDDHAYSEVEQDHD 217
           AYNH  NNNNNNNPDLHLHRLH RRQRFDNEEDDHAYSEVEQDHD
Sbjct: 121 AYNHSSNNNNNNNPDLHLHRLHHRRQRFDNEEDDHAYSEVEQDHD 165

[Close]

BLAST of Chy4G084690 vs. ExPASy TrEMBL
Match: A0A0A0LEJ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G810580 PE=3 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.0e-93
Identity = 161/166 (96.99%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT
Sbjct: 189 NMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 248

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN
Sbjct: 249 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 308

Query: 171 GHAAYNHNNNNNNNPDLHLHRLHRRRQRFDNEEDDHAYSEVEQDHD 217
           GHAAYNH N+NNNNPDLHLHRLH RRQRFDNEEDDHAYSEVEQDHD
Sbjct: 309 GHAAYNH-NHNNNNPDLHLHRLHHRRQRFDNEEDDHAYSEVEQDHD 353

[Close]

BLAST of Chy4G084690 vs. ExPASy TrEMBL
Match: A0A6J1F387 (zinc finger protein WIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111441785 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.6e-83
Identity = 151/169 (89.35%), Postives = 153/169 (90.53%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT
Sbjct: 187 NMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 246

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN
Sbjct: 247 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 306

Query: 171 GHAAYNHNNNNNNNPD---LHLHRLHRRRQRFDNEEDDHAYSEVEQDHD 217
           GHAAYN N+N NNNPD    H H  H R  RFD EE+D AYSEVEQDHD
Sbjct: 307 GHAAYN-NSNANNNPDHRHRHHHHCHHRHHRFD-EEEDPAYSEVEQDHD 353

[Close]

BLAST of Chy4G084690 vs. NCBI nr
Match: KAA0043705.1 (zinc finger protein WIP2-like [Cucumis melo var. makuwa])

HSP 1 Score: 355 bits (910), Expect = 7.27e-123
Identity = 162/165 (98.18%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 54  MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYK 113
           MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYK
Sbjct: 1   MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYK 60

Query: 114 RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHA 173
           RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHA
Sbjct: 61  RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHA 120

Query: 174 AYNH--NNNNNNNPDLHLHRLHRRRQRFDNEEDDHAYSEVEQDHD 216
           AYNH  NNNNNNNPDLHLHRLH RRQRFDNEEDDHAYSEVEQDHD
Sbjct: 121 AYNHSSNNNNNNNPDLHLHRLHHRRQRFDNEEDDHAYSEVEQDHD 165

[Close]

BLAST of Chy4G084690 vs. NCBI nr
Match: TYK25429.1 (zinc finger protein WIP2-like [Cucumis melo var. makuwa])

HSP 1 Score: 353 bits (907), Expect = 2.08e-122
Identity = 161/165 (97.58%), Postives = 162/165 (98.18%), Query Frame = 0


Query: 54  MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYK 113
           MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYK
Sbjct: 1   MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQTHYK 60

Query: 114 RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHA 173
           RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGK+WYCICGSDFKHKRSLKDHIKAFGNGHA
Sbjct: 61  RKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKVWYCICGSDFKHKRSLKDHIKAFGNGHA 120

Query: 174 AYNH--NNNNNNNPDLHLHRLHRRRQRFDNEEDDHAYSEVEQDHD 216
           AYNH  NNNNNNNPDLHLHRLH RRQRFDNEEDDHAYSEVEQDHD
Sbjct: 121 AYNHSSNNNNNNNPDLHLHRLHHRRQRFDNEEDDHAYSEVEQDHD 165

[Close]

BLAST of Chy4G084690 vs. NCBI nr
Match: XP_008443097.1 (PREDICTED: zinc finger protein WIP2-like [Cucumis melo])

HSP 1 Score: 356 bits (913), Expect = 1.87e-120
Identity = 163/168 (97.02%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT
Sbjct: 188 NMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 247

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN
Sbjct: 248 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 307

Query: 171 GHAAYNH--NNNNNNNPDLHLHRLHRRRQRFDNEEDDHAYSEVEQDHD 216
           GHAAYNH  NNNNNNNPDLHLHRLH RRQRFDNEEDDHAYSEVEQDHD
Sbjct: 308 GHAAYNHSSNNNNNNNPDLHLHRLHHRRQRFDNEEDDHAYSEVEQDHD 355

[Close]

BLAST of Chy4G084690 vs. NCBI nr
Match: XP_011652116.1 (zinc finger protein WIP2 [Cucumis sativus] >KGN59334.1 hypothetical protein Csa_002169 [Cucumis sativus])

HSP 1 Score: 353 bits (905), Expect = 2.87e-119
Identity = 161/166 (96.99%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT
Sbjct: 189 NMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 248

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN
Sbjct: 249 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 308

Query: 171 GHAAYNHNNNNNNNPDLHLHRLHRRRQRFDNEEDDHAYSEVEQDHD 216
           GHAAYNHN+NNNN PDLHLHRLH RRQRFDNEEDDHAYSEVEQDHD
Sbjct: 309 GHAAYNHNHNNNN-PDLHLHRLHHRRQRFDNEEDDHAYSEVEQDHD 353

[Close]

BLAST of Chy4G084690 vs. NCBI nr
Match: XP_038903724.1 (zinc finger protein WIP2 [Benincasa hispida])

HSP 1 Score: 322 bits (826), Expect = 2.84e-107
Identity = 155/172 (90.12%), Postives = 155/172 (90.12%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT
Sbjct: 184 NMQMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 243

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN
Sbjct: 244 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 303

Query: 171 GHAAYNHNNNNN----NNPD--LHLHRLHRRRQRFDNEEDDHAYSEVEQDHD 216
           GHAAYNH NNNN    NNPD   H HR H R   FD EEDDHAYSEVEQDHD
Sbjct: 304 GHAAYNHTNNNNANNNNNPDHRRHHHR-HHRLHGFD-EEDDHAYSEVEQDHD 353

[Close]

BLAST of Chy4G084690 vs. TAIR 10
Match: AT3G57670.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 275.0 bits (702), Expect = 5.1e-74
Identity = 131/169 (77.51%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYR+GPESLRGTQPTGMLRLPCYCC+PGCRNNIDHPRAKPLKDFRTLQT
Sbjct: 231 NMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQT 290

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN
Sbjct: 291 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 350

Query: 171 GHAAYNHNNNNNNNPDLHLHRLHRRRQRFDNEEDDHAYSEVEQ---DHD 217
           GH AY  +                    FD  E+D   SEVEQ   DH+
Sbjct: 351 GHGAYGIDG-------------------FD--EEDEPASEVEQLDNDHE 378

[Close]

BLAST of Chy4G084690 vs. TAIR 10
Match: AT3G20880.1 (WIP domain protein 4 )

HSP 1 Score: 260.8 bits (665), Expect = 1.0e-69
Identity = 107/122 (87.70%), Postives = 117/122 (95.90%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYR+GPESLRGTQPT ML+LPCYCC+PGC+NNIDHPRA+PLKDFRTLQT
Sbjct: 270 NMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQT 329

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHG++PF CR+CGKAFAV+GDWRTHEKNCGKLWYC CGSDFKHKRSLKDH+KAFGN
Sbjct: 330 HYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGN 389

Query: 171 GH 173
           GH
Sbjct: 390 GH 391

[Close]

BLAST of Chy4G084690 vs. TAIR 10
Match: AT1G51220.1 (WIP domain protein 5 )

HSP 1 Score: 257.3 bits (656), Expect = 1.1e-68
Identity = 111/138 (80.43%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYR+GPESLRGTQPTGMLRLPC+CC+PGC+NNIDHPRAKPLKDFRTLQT
Sbjct: 192 NMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPRAKPLKDFRTLQT 251

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHG KPF CR CGKAFAV+GDWRTHEKNCGKLWYC CGSDFKHKRSLKDH+KAFGN
Sbjct: 252 HYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGN 311

Query: 171 GHAAYNHNNNNNNNPDLH 189
           GH     ++   ++ D +
Sbjct: 312 GHVPCGIDSFGGDHEDYY 329

[Close]

BLAST of Chy4G084690 vs. TAIR 10
Match: AT1G34790.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 240.0 bits (611), Expect = 1.8e-63
Identity = 100/125 (80.00%), Postives = 109/125 (87.20%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGTQPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQT 110
           N  MHMWGHGSQYR+GPESL+GTQP  ML +PCYCC  GCRN+IDHPR+KPLKDFRTLQT
Sbjct: 159 NLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQT 218

Query: 111 HYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGN 170
           HYKRKHG KPF CR CGK  AV+GDWRTHEKNCGK W C+CGSDFKHKRSLKDH+KAFG+
Sbjct: 219 HYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKNCGKRWVCVCGSDFKHKRSLKDHVKAFGS 278

Query: 171 GHAAY 176
           GH  Y
Sbjct: 279 GHGPY 283

[Close]

BLAST of Chy4G084690 vs. TAIR 10
Match: AT1G08290.1 (WIP domain protein 3 )

HSP 1 Score: 233.8 bits (595), Expect = 1.3e-61
Identity = 97/126 (76.98%), Postives = 113/126 (89.68%), Query Frame = 0


Query: 51  NSLMHMWGHGSQYRRGPESLRGT-QPTGMLRLPCYCCSPGCRNNIDHPRAKPLKDFRTLQ 110
           N  MHMWGHGS++R+G +SL+GT QP  +LRLPCYCC+ GC+NNI+HPR+KPLKDFRTLQ
Sbjct: 194 NMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQ 253

Query: 111 THYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFG 170
           THYKRKHG KPF C KCGKA AV+GDWRTHEKNCGKLWYC CGSDFKHKRSLKDHI++FG
Sbjct: 254 THYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFG 313

Query: 171 NGHAAY 176
           +GH+ +
Sbjct: 314 SGHSPH 319

The following BLAST results are available for this feature:

BLAST of Chy4G084690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVY1	7.2e-73	77.51	Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1	[more]
Q8W030	1.4e-68	87.70	Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1	[more]
Q8W031	1.6e-67	80.43	Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1	[more]
Q8VWG3	2.6e-62	80.00	Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana OX=3702 GN=TT1 PE=1 SV=1	[more]
Q9SGD1	1.8e-60	76.98	Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1	[more]

BLAST of Chy4G084690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B791	9.1e-95	97.02	zinc finger protein WIP2-like OS=Cucumis melo OX=3656 GN=LOC103486795 PE=3 SV=1	[more]
A0A5A7TQQ4	2.6e-94	98.18	Zinc finger protein WIP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A5D3DQ16	5.9e-94	97.58	Zinc finger protein WIP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A0A0LEJ3	1.0e-93	96.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G810580 PE=3 SV=1	[more]
A0A6J1F387	1.6e-83	89.35	zinc finger protein WIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111441785 PE=3...	[more]

BLAST of Chy4G084690 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043705.1	7.27e-123	98.18	zinc finger protein WIP2-like [Cucumis melo var. makuwa]	[more]
TYK25429.1	2.08e-122	97.58	zinc finger protein WIP2-like [Cucumis melo var. makuwa]	[more]
XP_008443097.1	1.87e-120	97.02	PREDICTED: zinc finger protein WIP2-like [Cucumis melo]	[more]
XP_011652116.1	2.87e-119	96.99	zinc finger protein WIP2 [Cucumis sativus] >KGN59334.1 hypothetical protein Csa_...	[more]
XP_038903724.1	2.84e-107	90.12	zinc finger protein WIP2 [Benincasa hispida]	[more]

BLAST of Chy4G084690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57670.1	5.1e-74	77.51	C2H2-type zinc finger family protein	[more]
AT3G20880.1	1.0e-69	87.70	WIP domain protein 4	[more]
AT1G51220.1	1.1e-68	80.43	WIP domain protein 5	[more]
AT1G34790.1	1.8e-63	80.00	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G08290.1	1.3e-61	76.98	WIP domain protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 98..179 e-value: 2.0E-7 score: 32.9
None	No IPR available	PANTHER	PTHR45878:SF1	ZINC FINGER PROTEIN WIP2	coord: 52..212
IPR043584	Zinc finger protein WIP	PANTHER	PTHR45878	ZINC FINGER PROTEIN WIP2	coord: 52..212
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 121..141 score: 8.808193
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 103..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G084690.1	Chy4G084690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity