Chy4G084490 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G084490
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH04: 23677094 .. 23679206 (-)
RNA-Seq Expression	Chy4G084490
Synteny	Chy4G084490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGTTCTCCGCCAGCTTCACGCTCACATTCTCACACGCCCTCTTCCGCTTTCCTCATTTGCCTTTGCACTTTCCAAAATCGTTGCTTTCTGTGCTCTTTCTCCCTTTGGCAACATCAATTATGCCCGCTCAGTTTTCGCTCAAATCCCACACCCCAACATTTTCTCTTGGAATTCTCTAATCAAGGGCTATTCCCAGATTCATACCCTCTCCAAAGAACCCATTTTTTTGTTCAAGAAGCTTACTGAAACAGGGTACCCTGTTCCCAACTCCTTCACGTTGGCTTTTGTTCTCAAAGCTTGTGCGATTGTTACAGCGTTTGGAGAGGGTTTACAGGTTCATTCCCATGTTTTAAAAGATGGGTTTGGCAGTAGTCTGTTTGTTCAAACTTCGCTGGTTAACTTTTATGGAAAGTGCGAAGAGATTGGTTTTGCTAGGAAGGTGTTCGAGGAAATGCCTGTGAGAAACTTGGTGGCTTGGACTGCGATGATTAGTGGGCATGCGAGAGTCGGAGCAGTTGATGAAGCTATGGAGTTGTTTAGGGAGATGCAGAAGGCTGGGATTCAACCGGATGCGATGACTCTAGTGAGTGTTGTTTCGGCTTGTGCTGTGGCGGGGGCCTTGGATATTGGCTGCTGGTTGCATGCTTACATTGAGAAATATTTTGTTTTGACTGATCTCGAGCTTAGCACTGCACTTGTGGATATGTATGCTAAATGTGGATGTATTGAGAGGGCAAAGCAGGTTTTTGTTCATATGCCTGTGAAAGATACTACAGCTTGGAGCTCCATGATTATGGGCTTTGCATATCATGGACTTGCACAGGATGCTATAGACGCGTTTCAACAAATGTTGGAAACTGAGGTAACGTTCGATGATGTGTAAGTTTGTTGTAGGTTAATAAATTTTAAAAAGCTTCACTTATGTTTATGAACTAATTTTATGTCTAATAAGAGTTAACACCGATGCAGCATCTTGATTAGATTAATAAGTGATGGATTTATACCACATGAACAACAGAATAGGCCTACTGAAGAAAATGAAGGAAGACAGTCAAAAAAATTTAATGACCAAGTAGGCTAAATCCATTCTAAATAATGTAAATCAACTTTGCAACCATAAGAGAACTCTAATTACACATTTCCTCTTTTACAAGTTCATTCTTCTCAGTGTCAGTTCTAGTTCTTGTTTGGTACAAGTTCTGGGTTTTGATAGTCATGCACATATTAAGATAAATCTTATTTTCTTGCTTTTGTCAATTATTTTCAGTGGTGGTTTTCAGGTGACGCCGGACCATGTAACTTTCCTCGCTGTTCTATCAGCATGTGCTCACGGTGGACTTGTCTCTCGAGGTCGAAGATTTTGGTCACTCATGCTTGAATTTGGTATTGAGCCATCAGTTGAGCATTATGGTTGCAAAGTTGATTTACTGTGCCGATCAGGTCTTGTTGAAGAAGCTTATAGAATCAATACGACAATGAAAATCCCCCCAAATGCTGCAACTTGGCGGAGCTTGCTAATGGGTTGCAAGAAGAAAAGGCTGTTGAATCTAGGCGAGATCGTTGCCAGGTATCTTCTTGAACTAGAACCCTTAAATGCAGAGAACTACATTATGATTTCCAATTTGTATTCTTCTCTTTCACAATGGGAGAAGATGAGTGAACTAAGAAAGGTGATGAAGGAGAAATGCATTAAGCCGGTACCGGGTTGTAGCTCAATCGAAGTTGATGGTGTTGTTCATGAGTTTGTGATGGGTGACCAGTCCCATCCTGAGGTGAAAATGTTGAGAGAGTTTATGGAAGAAATGTCGATGCGAGTCCAGGATTCAGGGTATAGGCCAAGTATTTCAGATGTACTTCACAAAGTTGTGGATGAAGAGAAAGAATGCGCTTTAAGTGAGCATAGTGAGAGATTTGCAATTGCATATGGGCTACTCAAAACTAGAGCACCTGTTGTGATTAGGGTAGTGAAGAATCTGAGGGTGTGTGTAGATTGTCATGAAGTGATCAAGATAATCAGTAAGTTATATGAAAGAGAAATTATTGTACGAGATCGAGTTCGATTCCATAAGTTCATAAAGGGTACTTGCTCTTGTAAGGATTTCTGGTGA

mRNA sequence

ATGAGAGTTCTCCGCCAGCTTCACGCTCACATTCTCACACGCCCTCTTCCGCTTTCCTCATTTGCCTTTGCACTTTCCAAAATCGTTGCTTTCTGTGCTCTTTCTCCCTTTGGCAACATCAATTATGCCCGCTCAGTTTTCGCTCAAATCCCACACCCCAACATTTTCTCTTGGAATTCTCTAATCAAGGGCTATTCCCAGATTCATACCCTCTCCAAAGAACCCATTTTTTTGTTCAAGAAGCTTACTGAAACAGGGTACCCTGTTCCCAACTCCTTCACGTTGGCTTTTGTTCTCAAAGCTTGTGCGATTGTTACAGCGTTTGGAGAGGGTTTACAGGTTCATTCCCATGTTTTAAAAGATGGGTTTGGCAGTAGTCTGTTTGTTCAAACTTCGCTGGTTAACTTTTATGGAAAGTGCGAAGAGATTGGTTTTGCTAGGAAGGTGTTCGAGGAAATGCCTGTGAGAAACTTGGTGGCTTGGACTGCGATGATTAGTGGGCATGCGAGAGTCGGAGCAGTTGATGAAGCTATGGAGTTGTTTAGGGAGATGCAGAAGGCTGGGATTCAACCGGATGCGATGACTCTAGTGAGTGTTGTTTCGGCTTGTGCTGTGGCGGGGGCCTTGGATATTGGCTGCTGGTTGCATGCTTACATTGAGAAATATTTTGTTTTGACTGATCTCGAGCTTAGCACTGCACTTGTGGATATGTATGCTAAATGTGGATGTATTGAGAGGGCAAAGCAGGTTTTTGTTCATATGCCTGTGAAAGATACTACAGCTTGGAGCTCCATGATTATGGGCTTTGCATATCATGGACTTGCACAGGATGCTATAGACGCGTTTCAACAAATGTTGGAAACTGAGGTGACGCCGGACCATGTAACTTTCCTCGCTGTTCTATCAGCATGTGCTCACGGTGGACTTGTCTCTCGAGGTCGAAGATTTTGGTCACTCATGCTTGAATTTGGTATTGAGCCATCAGTTGAGCATTATGGTTGCAAAGTTGATTTACTGTGCCGATCAGGTCTTGTTGAAGAAGCTTATAGAATCAATACGACAATGAAAATCCCCCCAAATGCTGCAACTTGGCGGAGCTTGCTAATGGGTTGCAAGAAGAAAAGGCTGTTGAATCTAGGCGAGATCGTTGCCAGGTATCTTCTTGAACTAGAACCCTTAAATGCAGAGAACTACATTATGATTTCCAATTTGTATTCTTCTCTTTCACAATGGGAGAAGATGAGTGAACTAAGAAAGGTGATGAAGGAGAAATGCATTAAGCCGGTACCGGGTTGTAGCTCAATCGAAGTTGATGGTGTTGTTCATGAGTTTGTGATGGGTGACCAGTCCCATCCTGAGGTGAAAATGTTGAGAGAGTTTATGGAAGAAATGTCGATGCGAGTCCAGGATTCAGGGTATAGGCCAAGTATTTCAGATGTACTTCACAAAGTTGTGGATGAAGAGAAAGAATGCGCTTTAAGTGAGCATAGTGAGAGATTTGCAATTGCATATGGGCTACTCAAAACTAGAGCACCTGTTGTGATTAGGGTAGTGAAGAATCTGAGGGTGTGTGTAGATTGTCATGAAGTGATCAAGATAATCAGTAAGTTATATGAAAGAGAAATTATTGTACGAGATCGAGTTCGATTCCATAAGTTCATAAAGGGTACTTGCTCTTGTAAGGATTTCTGGTGA

Coding sequence (CDS)

ATGAGAGTTCTCCGCCAGCTTCACGCTCACATTCTCACACGCCCTCTTCCGCTTTCCTCATTTGCCTTTGCACTTTCCAAAATCGTTGCTTTCTGTGCTCTTTCTCCCTTTGGCAACATCAATTATGCCCGCTCAGTTTTCGCTCAAATCCCACACCCCAACATTTTCTCTTGGAATTCTCTAATCAAGGGCTATTCCCAGATTCATACCCTCTCCAAAGAACCCATTTTTTTGTTCAAGAAGCTTACTGAAACAGGGTACCCTGTTCCCAACTCCTTCACGTTGGCTTTTGTTCTCAAAGCTTGTGCGATTGTTACAGCGTTTGGAGAGGGTTTACAGGTTCATTCCCATGTTTTAAAAGATGGGTTTGGCAGTAGTCTGTTTGTTCAAACTTCGCTGGTTAACTTTTATGGAAAGTGCGAAGAGATTGGTTTTGCTAGGAAGGTGTTCGAGGAAATGCCTGTGAGAAACTTGGTGGCTTGGACTGCGATGATTAGTGGGCATGCGAGAGTCGGAGCAGTTGATGAAGCTATGGAGTTGTTTAGGGAGATGCAGAAGGCTGGGATTCAACCGGATGCGATGACTCTAGTGAGTGTTGTTTCGGCTTGTGCTGTGGCGGGGGCCTTGGATATTGGCTGCTGGTTGCATGCTTACATTGAGAAATATTTTGTTTTGACTGATCTCGAGCTTAGCACTGCACTTGTGGATATGTATGCTAAATGTGGATGTATTGAGAGGGCAAAGCAGGTTTTTGTTCATATGCCTGTGAAAGATACTACAGCTTGGAGCTCCATGATTATGGGCTTTGCATATCATGGACTTGCACAGGATGCTATAGACGCGTTTCAACAAATGTTGGAAACTGAGGTGACGCCGGACCATGTAACTTTCCTCGCTGTTCTATCAGCATGTGCTCACGGTGGACTTGTCTCTCGAGGTCGAAGATTTTGGTCACTCATGCTTGAATTTGGTATTGAGCCATCAGTTGAGCATTATGGTTGCAAAGTTGATTTACTGTGCCGATCAGGTCTTGTTGAAGAAGCTTATAGAATCAATACGACAATGAAAATCCCCCCAAATGCTGCAACTTGGCGGAGCTTGCTAATGGGTTGCAAGAAGAAAAGGCTGTTGAATCTAGGCGAGATCGTTGCCAGGTATCTTCTTGAACTAGAACCCTTAAATGCAGAGAACTACATTATGATTTCCAATTTGTATTCTTCTCTTTCACAATGGGAGAAGATGAGTGAACTAAGAAAGGTGATGAAGGAGAAATGCATTAAGCCGGTACCGGGTTGTAGCTCAATCGAAGTTGATGGTGTTGTTCATGAGTTTGTGATGGGTGACCAGTCCCATCCTGAGGTGAAAATGTTGAGAGAGTTTATGGAAGAAATGTCGATGCGAGTCCAGGATTCAGGGTATAGGCCAAGTATTTCAGATGTACTTCACAAAGTTGTGGATGAAGAGAAAGAATGCGCTTTAAGTGAGCATAGTGAGAGATTTGCAATTGCATATGGGCTACTCAAAACTAGAGCACCTGTTGTGATTAGGGTAGTGAAGAATCTGAGGGTGTGTGTAGATTGTCATGAAGTGATCAAGATAATCAGTAAGTTATATGAAAGAGAAATTATTGTACGAGATCGAGTTCGATTCCATAAGTTCATAAAGGGTACTTGCTCTTGTAAGGATTTCTGGTGA

Protein sequence

MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPNAATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW*

Homology

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BLAST of Chy4G084490 vs. ExPASy Swiss-Prot
Match: Q0WQW5 (Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H51 PE=1 SV=2)

HSP 1 Score: 464.5 bits (1194), Expect = 1.7e-129
Identity = 244/581 (42.00%), Postives = 363/581 (62.48%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLS-SFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWN 60
           M  L+QLHA  L    P   +  F   KI+     S F ++NYA  VF  I + + F WN
Sbjct: 61  MSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIENHSSFMWN 120

Query: 61  SLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVL 120
           +LI+  +   +  +E   L++K+ E G   P+  T  FVLKACA +  F EG QVH  ++
Sbjct: 121 TLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIV 180

Query: 121 KDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAME 180
           K GFG  ++V   L++ YG C  +  ARKVF+EMP R+LV+W +MI    R G  D A++
Sbjct: 181 KHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQ 240

Query: 181 LFREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEK---YFVLTDLELSTALVD 240
           LFREMQ++  +PD  T+ SV+SACA  G+L +G W HA++ +     V  D+ +  +L++
Sbjct: 241 LFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 300

Query: 241 MYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLE--TEVTPDH 300
           MY KCG +  A+QVF  M  +D  +W++MI+GFA HG A++A++ F +M++    V P+ 
Sbjct: 301 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 360

Query: 301 VTFLAVLSACAHGGLVSRGRRFWSLML-EFGIEPSVEHYGCKVDLLCRSGLVEEAYRINT 360
           VTF+ +L AC H G V++GR+++ +M+ ++ IEP++EHYGC VDL+ R+G + EA  +  
Sbjct: 361 VTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 420

Query: 361 TMKIPPNAATWRSLLMG-CKKKRLLNLGEIVARYLLELEPLNAEN-------YIMISNLY 420
           +M + P+A  WRSLL   CKK   + L E +AR ++  +  N  +       Y+++S +Y
Sbjct: 421 SMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVY 480

Query: 421 SSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMS 480
           +S S+W  +  +RK+M E  I+  PGCSSIE++G+ HEF  GD SHP+ K + + ++ + 
Sbjct: 481 ASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVID 540

Query: 481 MRVQDSGYRP--SISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRV 540
            R++  GY P  S + ++    D  KE +L  HSER AIA+GL+       IR+ KNLRV
Sbjct: 541 DRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRV 600

Query: 541 CVDCHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 565
           C DCHEV K+ISK++  EIIVRDRVRFH F  G+CSC D+W
Sbjct: 601 CNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638

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BLAST of Chy4G084490 vs. ExPASy Swiss-Prot
Match: Q9FI80 (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 6.3e-129
Identity = 250/613 (40.78%), Postives = 365/613 (59.54%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPF--GNINYARSVFAQIPHPNIFSW 60
           +R L Q+HA  +       + A A  +I+ FCA S     +++YA  +F Q+P  N FSW
Sbjct: 36  IRDLSQIHAVFIKSGQMRDTLAAA--EILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSW 95

Query: 61  NSLIKGYSQI-HTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSH 120
           N++I+G+S+     +   I LF ++    +  PN FT   VLKACA      EG Q+H  
Sbjct: 96  NTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGL 155

Query: 121 VLKDGFGSSLFVQTSLVNFYGKC------------------------------------- 180
            LK GFG   FV ++LV  Y  C                                     
Sbjct: 156 ALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNV 215

Query: 181 --------EEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPD 240
                    +   AR +F++M  R++V+W  MISG++  G   +A+E+FREM+K  I+P+
Sbjct: 216 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 275

Query: 241 AMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFV 300
            +TLVSV+ A +  G+L++G WLH Y E   +  D  L +AL+DMY+KCG IE+A  VF 
Sbjct: 276 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 335

Query: 301 HMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSR 360
            +P ++   WS+MI GFA HG A DAID F +M +  V P  V ++ +L+AC+HGGLV  
Sbjct: 336 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 395

Query: 361 GRRFWSLMLEF-GIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPNAATWRSLLMGC 420
           GRR++S M+   G+EP +EHYGC VDLL RSGL++EA      M I P+   W++LL  C
Sbjct: 396 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGAC 455

Query: 421 KKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPG 480
           + +  + +G+ VA  L+++ P ++  Y+ +SN+Y+S   W ++SE+R  MKEK I+  PG
Sbjct: 456 RMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPG 515

Query: 481 CSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDVLHKVVDEEKEC 540
           CS I++DGV+HEFV+ D SHP+ K +   + E+S +++ +GYRP  + VL  + +E+KE 
Sbjct: 516 CSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKEN 575

Query: 541 ALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYEREIIVRDRVRFH 565
            L  HSE+ A A+GL+ T     IR+VKNLR+C DCH  IK+ISK+Y+R+I VRDR RFH
Sbjct: 576 VLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFH 635

[Close]

BLAST of Chy4G084490 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 2.7e-127
Identity = 222/530 (41.89%), Postives = 343/530 (64.72%), Query Frame = 0


Query: 38  GNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAF 97
           G I  A+ +F +IP  ++ SWN++I GY++     KE + LFK + +T    P+  T+  
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNY-KEALELFKDMMKTNVR-PDESTMVT 273

Query: 98  VLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRN 157
           V+ ACA   +   G QVH  +   GFGS+L +  +L++ Y KC E+  A  +FE +P ++
Sbjct: 274 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 333

Query: 158 LVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHA 217
           +++W  +I G+  +    EA+ LF+EM ++G  P+ +T++S++ ACA  GA+DIG W+H 
Sbjct: 334 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 393

Query: 218 YIEKYF--VLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLA 277
           YI+K    V     L T+L+DMYAKCG IE A QVF  +  K  ++W++MI GFA HG A
Sbjct: 394 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 453

Query: 278 QDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRR-FWSLMLEFGIEPSVEHYGC 337
             + D F +M +  + PD +TF+ +LSAC+H G++  GR  F ++  ++ + P +EHYGC
Sbjct: 454 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC 513

Query: 338 KVDLLCRSGLVEEAYRINTTMKIPPNAATWRSLLMGCKKKRLLNLGEIVARYLLELEPLN 397
            +DLL  SGL +EA  +   M++ P+   W SLL  CK    + LGE  A  L+++EP N
Sbjct: 514 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 573

Query: 398 AENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEV 457
             +Y+++SN+Y+S  +W ++++ R ++ +K +K VPGCSSIE+D VVHEF++GD+ HP  
Sbjct: 574 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 633

Query: 458 KMLREFMEEMSMRVQDSGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPVV 517
           + +   +EEM + ++ +G+ P  S+VL ++ +E KE AL  HSE+ AIA+GL+ T+    
Sbjct: 634 REIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTK 693

Query: 518 IRVVKNLRVCVDCHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 565
           + +VKNLRVC +CHE  K+ISK+Y+REII RDR RFH F  G CSC D+W
Sbjct: 694 LTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of Chy4G084490 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 453.8 bits (1166), Expect = 2.9e-126
Identity = 233/564 (41.31%), Postives = 357/564 (63.30%), Query Frame = 0


Query: 4   LRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHP-NIFSWNSLI 63
           LRQ+HA  +   + +S        I    +L     ++YA  VF++I  P N+F WN+LI
Sbjct: 33  LRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLI 92

Query: 64  KGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDG 123
           +GY++I   S     L++++  +G   P++ T  F++KA   +     G  +HS V++ G
Sbjct: 93  RGYAEIGN-SISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG 152

Query: 124 FGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFR 183
           FGS ++VQ SL++ Y  C ++  A KVF++MP ++LVAW ++I+G A  G  +EA+ L+ 
Sbjct: 153 FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 212

Query: 184 EMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAKCG 243
           EM   GI+PD  T+VS++SACA  GAL +G  +H Y+ K  +  +L  S  L+D+YA+CG
Sbjct: 213 EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG 272

Query: 244 CIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETE-VTPDHVTFLAVL 303
            +E AK +F  M  K++ +W+S+I+G A +G  ++AI+ F+ M  TE + P  +TF+ +L
Sbjct: 273 RVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGIL 332

Query: 304 SACAHGGLVSRGRRFWSLML-EFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPN 363
            AC+H G+V  G  ++  M  E+ IEP +EH+GC VDLL R+G V++AY    +M + PN
Sbjct: 333 YACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPN 392

Query: 364 AATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 423
              WR+LL  C      +L E     +L+LEP ++ +Y+++SN+Y+S  +W  + ++RK 
Sbjct: 393 VVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQ 452

Query: 424 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDV 483
           M    +K VPG S +EV   VHEF+MGD+SHP+   +   ++EM+ R++  GY P IS+V
Sbjct: 453 MLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNV 512

Query: 484 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 543
              V +EEKE A+  HSE+ AIA+ L+ T     I VVKNLRVC DCH  IK++SK+Y R
Sbjct: 513 YVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNR 572

Query: 544 EIIVRDRVRFHKFIKGTCSCKDFW 565
           EI+VRDR RFH F  G+CSC+D+W
Sbjct: 573 EIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of Chy4G084490 vs. ExPASy Swiss-Prot
Match: Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 453.4 bits (1165), Expect = 3.8e-126
Identity = 238/567 (41.98%), Postives = 359/567 (63.32%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPF-GNINYARSVFAQIPHPNIFSWN 60
           +R L Q+ A+ +   +   SF   ++K++ FC  SP   +++YAR +F  +  P+I  +N
Sbjct: 42  LRELMQIQAYAIKSHIEDVSF---VAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFN 101

Query: 61  SLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVL 120
           S+ +GYS+  T   E   LF ++ E G  +P+++T   +LKACA+  A  EG Q+H   +
Sbjct: 102 SMARGYSRF-TNPLEVFSLFVEILEDGI-LPDNYTFPSLLKACAVAKALEEGRQLHCLSM 161

Query: 121 KDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAME 180
           K G   +++V  +L+N Y +CE++  AR VF+ +    +V + AMI+G+AR    +EA+ 
Sbjct: 162 KLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALS 221

Query: 181 LFREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYA 240
           LFREMQ   ++P+ +TL+SV+S+CA+ G+LD+G W+H Y +K+     ++++TAL+DM+A
Sbjct: 222 LFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFA 281

Query: 241 KCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLA 300
           KCG ++ A  +F  M  KDT AWS+MI+ +A HG A+ ++  F++M    V PD +TFL 
Sbjct: 282 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 341

Query: 301 VLSACAHGGLVSRGRRFWSLML-EFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIP 360
           +L+AC+H G V  GR+++S M+ +FGI PS++HYG  VDLL R+G +E+AY     + I 
Sbjct: 342 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS 401

Query: 361 PNAATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELR 420
           P    WR LL  C     L+L E V+  + EL+  +  +Y+++SNLY+   +WE +  LR
Sbjct: 402 PTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLR 461

Query: 421 KVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSIS 480
           KVMK++    VPGCSSIEV+ VVHEF  GD        L   ++EM   ++ SGY P  S
Sbjct: 462 KVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTS 521

Query: 481 DVLH-KVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKL 540
            V+H  + D+EKE  L  HSE+ AI +GLL T     IRVVKNLRVC DCH   K+IS +
Sbjct: 522 MVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLI 581

Query: 541 YEREIIVRDRVRFHKFIKGTCSCKDFW 565
           + R++++RD  RFH F  G CSC DFW
Sbjct: 582 FGRKVVLRDVQRFHHFEDGKCSCGDFW 603

[Close]

BLAST of Chy4G084490 vs. ExPASy TrEMBL
Match: A0A0A0LF80 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G812780 PE=3 SV=1)

HSP 1 Score: 1130.2 bits (2922), Expect = 0.0e+00
Identity = 559/564 (99.11%), Postives = 563/564 (99.82%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
           MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS
Sbjct: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60

Query: 61  LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
           LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK
Sbjct: 61  LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120

Query: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180
           DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL
Sbjct: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180

Query: 181 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAK 240
           FREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAK
Sbjct: 181 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAK 240

Query: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAV 300
           CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAV
Sbjct: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAV 300

Query: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPN 360
           LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRI TTMKIPPN
Sbjct: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPN 360

Query: 361 AATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420
           AATWRSLLMGCKKK+LLNLGEIVARYLLELEPLNAEN+IMISNLYSSLSQWEKMSELRKV
Sbjct: 361 AATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENFIMISNLYSSLSQWEKMSELRKV 420

Query: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDV 480
           MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRV+DSGYRPSISDV
Sbjct: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVRDSGYRPSISDV 480

Query: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 540
           LHKVVDEEKECALSEHSERFAIAYGLLKTRAP+VIRVVKNLRVCVDCHEVIKIISKLYER
Sbjct: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPIVIRVVKNLRVCVDCHEVIKIISKLYER 540

Query: 541 EIIVRDRVRFHKFIKGTCSCKDFW 565
           EIIVRDRVRFHKFIKGTCSCKDFW
Sbjct: 541 EIIVRDRVRFHKFIKGTCSCKDFW 564

[Close]

BLAST of Chy4G084490 vs. ExPASy TrEMBL
Match: A0A5D3DQ32 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005950 PE=3 SV=1)

HSP 1 Score: 1105.1 bits (2857), Expect = 0.0e+00
Identity = 544/564 (96.45%), Postives = 556/564 (98.58%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
           MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNI+YARSVF QIPHPNIFSWNS
Sbjct: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNIDYARSVFVQIPHPNIFSWNS 60

Query: 61  LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
           LIKGYSQI+T SKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIV AFGEGLQVHSHVLK
Sbjct: 61  LIKGYSQIYTPSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVAAFGEGLQVHSHVLK 120

Query: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180
           DGFGSSLFVQTSLVNFYGKCEEIGFARKVF+EMPVRNLVAWTAMISGHARVGAVDEAM L
Sbjct: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFDEMPVRNLVAWTAMISGHARVGAVDEAMGL 180

Query: 181 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAK 240
           FREMQKAG+QPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTAL+DMYAK
Sbjct: 181 FREMQKAGVQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALLDMYAK 240

Query: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAV 300
           CGCIERAKQVFVHMPVKDTTAWSSMIMG AYHGL +DA+DAFQQMLETEV PDHVTFLAV
Sbjct: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGLAYHGLVEDAVDAFQQMLETEVMPDHVTFLAV 300

Query: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPN 360
           LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRI TTMKIPPN
Sbjct: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPN 360

Query: 361 AATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420
           AATWRSLLMGCKKK+LLNLGEI+ARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV
Sbjct: 361 AATWRSLLMGCKKKKLLNLGEIIARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420

Query: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDV 480
           MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVK+LREFM+EMSMRV+DSGYRPSISDV
Sbjct: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKVLREFMKEMSMRVRDSGYRPSISDV 480

Query: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 540
           LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER
Sbjct: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 540

Query: 541 EIIVRDRVRFHKFIKGTCSCKDFW 565
           EIIVRDRVRFHKFIKGTCSCKDFW
Sbjct: 541 EIIVRDRVRFHKFIKGTCSCKDFW 564

[Close]

BLAST of Chy4G084490 vs. ExPASy TrEMBL
Match: A0A1S3B831 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103486823 PE=3 SV=1)

HSP 1 Score: 1105.1 bits (2857), Expect = 0.0e+00
Identity = 544/564 (96.45%), Postives = 556/564 (98.58%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
           MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNI+YARSVF QIPHPNIFSWNS
Sbjct: 22  MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNIDYARSVFVQIPHPNIFSWNS 81

Query: 61  LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
           LIKGYSQI+T SKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIV AFGEGLQVHSHVLK
Sbjct: 82  LIKGYSQIYTPSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVAAFGEGLQVHSHVLK 141

Query: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180
           DGFGSSLFVQTSLVNFYGKCEEIGFARKVF+EMPVRNLVAWTAMISGHARVGAVDEAM L
Sbjct: 142 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFDEMPVRNLVAWTAMISGHARVGAVDEAMGL 201

Query: 181 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAK 240
           FREMQKAG+QPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTAL+DMYAK
Sbjct: 202 FREMQKAGVQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALLDMYAK 261

Query: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAV 300
           CGCIERAKQVFVHMPVKDTTAWSSMIMG AYHGL +DA+DAFQQMLETEV PDHVTFLAV
Sbjct: 262 CGCIERAKQVFVHMPVKDTTAWSSMIMGLAYHGLVEDAVDAFQQMLETEVMPDHVTFLAV 321

Query: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPN 360
           LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRI TTMKIPPN
Sbjct: 322 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPN 381

Query: 361 AATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420
           AATWRSLLMGCKKK+LLNLGEI+ARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV
Sbjct: 382 AATWRSLLMGCKKKKLLNLGEIIARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 441

Query: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDV 480
           MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVK+LREFM+EMSMRV+DSGYRPSISDV
Sbjct: 442 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKVLREFMKEMSMRVRDSGYRPSISDV 501

Query: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 540
           LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER
Sbjct: 502 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 561

Query: 541 EIIVRDRVRFHKFIKGTCSCKDFW 565
           EIIVRDRVRFHKFIKGTCSCKDFW
Sbjct: 562 EIIVRDRVRFHKFIKGTCSCKDFW 585

[Close]

BLAST of Chy4G084490 vs. ExPASy TrEMBL
Match: A0A6J1DL35 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111021527 PE=3 SV=1)

HSP 1 Score: 970.7 bits (2508), Expect = 2.6e-279
Identity = 472/564 (83.69%), Postives = 518/564 (91.84%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
           MR+LRQLHA ILTRPLPLS+F+FALSK++AFCALSP G+I+YAR++FAQIP+P+IFSWNS
Sbjct: 40  MRLLRQLHARILTRPLPLSTFSFALSKVLAFCALSPLGDIHYARTLFAQIPNPSIFSWNS 99

Query: 61  LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
           LIKG SQI   SKEP+ LFKKL ETGYP PNSFTLAFVLKACA+V A GEG+QVH  VL+
Sbjct: 100 LIKGCSQIQNPSKEPLLLFKKLAETGYPAPNSFTLAFVLKACAVVAALGEGVQVHCRVLR 159

Query: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180
            GFG SLFVQT+LVNFYGKCEEIG ARKVF+EMP RNLVAWTAMISGH RVGAV+EAM L
Sbjct: 160 GGFGGSLFVQTALVNFYGKCEEIGVARKVFDEMPERNLVAWTAMISGHTRVGAVNEAMGL 219

Query: 181 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAK 240
           FREMQKAG+ PDA+TLVSVVSACAVAGALDIGCWLHAYIEKYFV TDLEL TAL+DMYAK
Sbjct: 220 FREMQKAGVGPDAVTLVSVVSACAVAGALDIGCWLHAYIEKYFVSTDLELETALLDMYAK 279

Query: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAV 300
           CGCIERAKQVF  MPVKDT AWSSMIMGFA HGL++DAIDAFQQMLE +V PDHVTF+ +
Sbjct: 280 CGCIERAKQVFDSMPVKDTRAWSSMIMGFACHGLSEDAIDAFQQMLEAKVMPDHVTFIGI 339

Query: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPN 360
           LSACAHGGLVS GRR+WSLMLEFGIEPSVEHYGC VDLLCRSGLVE+AY+I TT  IPPN
Sbjct: 340 LSACAHGGLVSEGRRYWSLMLEFGIEPSVEHYGCIVDLLCRSGLVEDAYKIVTTTTIPPN 399

Query: 361 AATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420
            ATWRSLL GCKK++LLNLGE+VA YL ++EPLN ENYI++SNLYSS+SQWEKMSELRK 
Sbjct: 400 PATWRSLLTGCKKEKLLNLGEVVAGYLFKIEPLNPENYILLSNLYSSVSQWEKMSELRKK 459

Query: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDV 480
           MKE+ IKP+PGCSSIEVDGVVHEFVM D+SHPE+KMLREFMEEM+ RV+D+GYRPSISDV
Sbjct: 460 MKERGIKPIPGCSSIEVDGVVHEFVMSDRSHPEMKMLREFMEEMAERVRDTGYRPSISDV 519

Query: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 540
           LHKVVDEEKE AL EHSERFAIAYGLLKTRAPVVIRVVKNLRVC DCHEVIKI+SK+YER
Sbjct: 520 LHKVVDEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIVSKIYER 579

Query: 541 EIIVRDRVRFHKFIKGTCSCKDFW 565
           EIIVRDRVRFHKFIKGTCSCKDFW
Sbjct: 580 EIIVRDRVRFHKFIKGTCSCKDFW 603

[Close]

BLAST of Chy4G084490 vs. ExPASy TrEMBL
Match: A0A6J1J7L0 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481984 PE=3 SV=1)

HSP 1 Score: 968.4 bits (2502), Expect = 1.3e-278
Identity = 479/564 (84.93%), Postives = 515/564 (91.31%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
           MRVLRQLHAHILTRPLPLS+F+FALSKI AFCALSP GNI+YAR VFAQI   +IFSWNS
Sbjct: 56  MRVLRQLHAHILTRPLPLSTFSFALSKITAFCALSPLGNIDYARLVFAQIARTSIFSWNS 115

Query: 61  LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
           LIKG S+I   SKEPI LFKKL+ETGYPVPNSFT+AFVLKACAIVTAF EGLQVHS VLK
Sbjct: 116 LIKGCSKIQNPSKEPIALFKKLSETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHSRVLK 175

Query: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180
           DGFGSS FVQTSLVNFYGKCEEIG A+KVF+EMP RNLVAWTAMISGH RVGAVDEA+ L
Sbjct: 176 DGFGSSSFVQTSLVNFYGKCEEIGLAKKVFDEMPERNLVAWTAMISGHVRVGAVDEALGL 235

Query: 181 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAK 240
           FREMQKAGI+PDA+TLVSVVSACA AGALDIG W+HAYIEK  VLTDLEL TALVDMYAK
Sbjct: 236 FREMQKAGIEPDAVTLVSVVSACAAAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAK 295

Query: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAV 300
           CGCIE+AKQVFVHMPV+DT AWSSMIMGFAYHGL++DAI AF+QMLE EV PD VTF+ +
Sbjct: 296 CGCIEKAKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIAAFRQMLEAEVMPDRVTFIGI 355

Query: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPN 360
           LSACAHGG+VS G+R WSLMLE GIEPSVEHYGC VDLLCRSGLVEEAYRI TT  IP N
Sbjct: 356 LSACAHGGIVSEGQRIWSLMLECGIEPSVEHYGCIVDLLCRSGLVEEAYRIVTTTNIPSN 415

Query: 361 AATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420
            ATWRSLL GCKKKRL NLGEIVARYLL+LEPLNAENYI+ISNLYSS+SQWEKMSELRK 
Sbjct: 416 PATWRSLLKGCKKKRLSNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKE 475

Query: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDV 480
           MKE  +KP+PGCSSIEVDGVVHEFVMGDQSHPEVK+LREFMEEM+ RV DSGYRPS+SDV
Sbjct: 476 MKENSVKPIPGCSSIEVDGVVHEFVMGDQSHPEVKILREFMEEMARRVWDSGYRPSVSDV 535

Query: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 540
           LHKV+ EEKE AL EHSERFAIAYGLLKTRAPVVIRVVKNLRVC DCHEVIK+ISK+YER
Sbjct: 536 LHKVMYEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKMISKIYER 595

Query: 541 EIIVRDRVRFHKFIKGTCSCKDFW 565
           EIIVRDRVRFHKF++GTCSCKD+W
Sbjct: 596 EIIVRDRVRFHKFVEGTCSCKDYW 619

[Close]

BLAST of Chy4G084490 vs. NCBI nr
Match: XP_031737591.1 (pentatricopeptide repeat-containing protein At4g21065 [Cucumis sativus])

HSP 1 Score: 1117 bits (2888), Expect = 0.0
Identity = 558/574 (97.21%), Postives = 562/574 (97.91%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
           MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS
Sbjct: 48  MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 107

Query: 61  LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
           LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK
Sbjct: 108 LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 167

Query: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180
           DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL
Sbjct: 168 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 227

Query: 181 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAK 240
           FREMQKAGIQPDAMTLVSVVSACAVAGALDIG WLHAYIEKYFVLTDLELSTALVDMYAK
Sbjct: 228 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGYWLHAYIEKYFVLTDLELSTALVDMYAK 287

Query: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVT--------- 300
           CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVT         
Sbjct: 288 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTFDDVGGFQV 347

Query: 301 -PDHVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYR 360
            PDHVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYR
Sbjct: 348 TPDHVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYR 407

Query: 361 INTTMKIPPNAATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQ 420
           I TTMKIPPNAATWRSLLMGCKKK+LLNLGEIVARYLLELEPLNAEN+IMISNLYSSLSQ
Sbjct: 408 ITTTMKIPPNAATWRSLLMGCKKKKLLNLGEIVARYLLELEPLNAENFIMISNLYSSLSQ 467

Query: 421 WEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQD 480
           WEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRV+D
Sbjct: 468 WEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVRD 527

Query: 481 SGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEV 540
           SGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAP+VIRVVKNLRVCVDCHEV
Sbjct: 528 SGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPIVIRVVKNLRVCVDCHEV 587

Query: 541 IKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 564
           IKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW
Sbjct: 588 IKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 621

[Close]

BLAST of Chy4G084490 vs. NCBI nr
Match: KAA0043682.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25449.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1104 bits (2855), Expect = 0.0
Identity = 544/564 (96.45%), Postives = 556/564 (98.58%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
           MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNI+YARSVF QIPHPNIFSWNS
Sbjct: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNIDYARSVFVQIPHPNIFSWNS 60

Query: 61  LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
           LIKGYSQI+T SKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIV AFGEGLQVHSHVLK
Sbjct: 61  LIKGYSQIYTPSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVAAFGEGLQVHSHVLK 120

Query: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180
           DGFGSSLFVQTSLVNFYGKCEEIGFARKVF+EMPVRNLVAWTAMISGHARVGAVDEAM L
Sbjct: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFDEMPVRNLVAWTAMISGHARVGAVDEAMGL 180

Query: 181 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAK 240
           FREMQKAG+QPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTAL+DMYAK
Sbjct: 181 FREMQKAGVQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALLDMYAK 240

Query: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAV 300
           CGCIERAKQVFVHMPVKDTTAWSSMIMG AYHGL +DA+DAFQQMLETEV PDHVTFLAV
Sbjct: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGLAYHGLVEDAVDAFQQMLETEVMPDHVTFLAV 300

Query: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPN 360
           LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRI TTMKIPPN
Sbjct: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPN 360

Query: 361 AATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420
           AATWRSLLMGCKKK+LLNLGEI+ARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV
Sbjct: 361 AATWRSLLMGCKKKKLLNLGEIIARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420

Query: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDV 480
           MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVK+LREFM+EMSMRV+DSGYRPSISDV
Sbjct: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKVLREFMKEMSMRVRDSGYRPSISDV 480

Query: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 540
           LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER
Sbjct: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 540

Query: 541 EIIVRDRVRFHKFIKGTCSCKDFW 564
           EIIVRDRVRFHKFIKGTCSCKDFW
Sbjct: 541 EIIVRDRVRFHKFIKGTCSCKDFW 564

[Close]

BLAST of Chy4G084490 vs. NCBI nr
Match: XP_008443148.2 (PREDICTED: pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like, partial [Cucumis melo])

HSP 1 Score: 1104 bits (2855), Expect = 0.0
Identity = 544/564 (96.45%), Postives = 556/564 (98.58%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
           MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNI+YARSVF QIPHPNIFSWNS
Sbjct: 22  MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNIDYARSVFVQIPHPNIFSWNS 81

Query: 61  LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
           LIKGYSQI+T SKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIV AFGEGLQVHSHVLK
Sbjct: 82  LIKGYSQIYTPSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVAAFGEGLQVHSHVLK 141

Query: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180
           DGFGSSLFVQTSLVNFYGKCEEIGFARKVF+EMPVRNLVAWTAMISGHARVGAVDEAM L
Sbjct: 142 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFDEMPVRNLVAWTAMISGHARVGAVDEAMGL 201

Query: 181 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAK 240
           FREMQKAG+QPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTAL+DMYAK
Sbjct: 202 FREMQKAGVQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALLDMYAK 261

Query: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAV 300
           CGCIERAKQVFVHMPVKDTTAWSSMIMG AYHGL +DA+DAFQQMLETEV PDHVTFLAV
Sbjct: 262 CGCIERAKQVFVHMPVKDTTAWSSMIMGLAYHGLVEDAVDAFQQMLETEVMPDHVTFLAV 321

Query: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPN 360
           LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRI TTMKIPPN
Sbjct: 322 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITTTMKIPPN 381

Query: 361 AATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420
           AATWRSLLMGCKKK+LLNLGEI+ARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV
Sbjct: 382 AATWRSLLMGCKKKKLLNLGEIIARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 441

Query: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDV 480
           MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVK+LREFM+EMSMRV+DSGYRPSISDV
Sbjct: 442 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKVLREFMKEMSMRVRDSGYRPSISDV 501

Query: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 540
           LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER
Sbjct: 502 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 561

Query: 541 EIIVRDRVRFHKFIKGTCSCKDFW 564
           EIIVRDRVRFHKFIKGTCSCKDFW
Sbjct: 562 EIIVRDRVRFHKFIKGTCSCKDFW 585

[Close]

BLAST of Chy4G084490 vs. NCBI nr
Match: XP_038904476.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like, partial [Benincasa hispida])

HSP 1 Score: 1046 bits (2704), Expect = 0.0
Identity = 513/564 (90.96%), Postives = 537/564 (95.21%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
           MRVLRQLHAHILTRPLPLS+F+FALSKIVAFCALSP GN++YARSVFAQI HPNIFSWNS
Sbjct: 48  MRVLRQLHAHILTRPLPLSTFSFALSKIVAFCALSPLGNVDYARSVFAQISHPNIFSWNS 107

Query: 61  LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
           +IKG  QI   SKEPI LFKKLTETGYPVPNSFTLAFVLKACA+VTAFGEGLQVHSHVLK
Sbjct: 108 MIKGCFQIQNPSKEPIMLFKKLTETGYPVPNSFTLAFVLKACALVTAFGEGLQVHSHVLK 167

Query: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180
           DGFG SLFVQTSLVNFYGKCEEIG ARKVF+EMPVRNLVAWTAMISGHARVG VDEAMEL
Sbjct: 168 DGFGGSLFVQTSLVNFYGKCEEIGLARKVFDEMPVRNLVAWTAMISGHARVGEVDEAMEL 227

Query: 181 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAK 240
           FREMQKAGI+PD MTLVSVVSACAVAG LDIGCWLH YI+KYFV TDL LSTALVDMYAK
Sbjct: 228 FREMQKAGIEPDEMTLVSVVSACAVAGTLDIGCWLHTYIKKYFVFTDLVLSTALVDMYAK 287

Query: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAV 300
           CGCIERAKQVF+ MPVKDTTAWSSMIMGFAYHGL++DAI+AFQQMLETEV PDHVTFLA+
Sbjct: 288 CGCIERAKQVFLQMPVKDTTAWSSMIMGFAYHGLSEDAINAFQQMLETEVMPDHVTFLAI 347

Query: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPN 360
           LSACAHGGLVS GRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRI  TMKIPPN
Sbjct: 348 LSACAHGGLVSEGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRITKTMKIPPN 407

Query: 361 AATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420
           AATWRSLLMGCKKK+LLNLGEI+ARYLLELEPLNAENYI+ISNLYSSLSQWEKMSELRKV
Sbjct: 408 AATWRSLLMGCKKKKLLNLGEIIARYLLELEPLNAENYILISNLYSSLSQWEKMSELRKV 467

Query: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDV 480
           MKEKCIKP+PGCSSIEVDGV+HEFVMGDQSHPEVKMLREFMEEM +RV+DSGYRPSISDV
Sbjct: 468 MKEKCIKPIPGCSSIEVDGVIHEFVMGDQSHPEVKMLREFMEEMLVRVRDSGYRPSISDV 527

Query: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 540
           LHKVV+EEKE AL EHSERFA+AYGLLKTRAPVVIRVVKNLRVC DCHEVIKIIS +YER
Sbjct: 528 LHKVVNEEKEGALGEHSERFAMAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISMIYER 587

Query: 541 EIIVRDRVRFHKFIKGTCSCKDFW 564
           EIIVRDRVRFHKFIKG CSCKDFW
Sbjct: 588 EIIVRDRVRFHKFIKGKCSCKDFW 611

[Close]

BLAST of Chy4G084490 vs. NCBI nr
Match: XP_023528910.1 (pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 970 bits (2507), Expect = 0.0
Identity = 479/564 (84.93%), Postives = 517/564 (91.67%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWNS 60
           MRVLRQLHAHILTRPLP+S+F+FALSKI AFCALSP GNI+YAR VFAQI  P+IFSWNS
Sbjct: 52  MRVLRQLHAHILTRPLPVSTFSFALSKITAFCALSPLGNIDYARLVFAQIARPSIFSWNS 111

Query: 61  LIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLK 120
           LIKG S+I   SKEPI LF+KLTETGYPVPNSFT+AFVLKACAIVTAF EGLQVH+ VLK
Sbjct: 112 LIKGCSKIQNPSKEPIALFQKLTETGYPVPNSFTMAFVLKACAIVTAFEEGLQVHARVLK 171

Query: 121 DGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMEL 180
           DGFGSS FVQTSLVNFYGKCEEIG A+KVF+EMP RNLVAWTAMISGH RVGA+DEAM L
Sbjct: 172 DGFGSSSFVQTSLVNFYGKCEEIGLAKKVFDEMPERNLVAWTAMISGHVRVGALDEAMGL 231

Query: 181 FREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAK 240
           FREMQKAG++PDA+TLVSVVSACA+AGALDIG W+HAYIEK  VLTDLEL TALVDMYAK
Sbjct: 232 FREMQKAGVEPDAVTLVSVVSACALAGALDIGSWVHAYIEKRSVLTDLELGTALVDMYAK 291

Query: 241 CGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAV 300
           CGCIERAKQVFVHMPV+DT AWSSMIMGFAYHGL++DAI AFQQMLE EV PD VTF+ +
Sbjct: 292 CGCIERAKQVFVHMPVRDTRAWSSMIMGFAYHGLSEDAIGAFQQMLEAEVMPDRVTFIGI 351

Query: 301 LSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPN 360
           LSAC+HGG+VS G RFWSLMLE GIEPSVEHYGC VDLLCRSGLVEEAYRI TT  IP N
Sbjct: 352 LSACSHGGIVSEGLRFWSLMLECGIEPSVEHYGCIVDLLCRSGLVEEAYRIVTTTNIPSN 411

Query: 361 AATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 420
            ATWRSLL GCKKK+L NLGEIVARYLL+LEPLNAENYI+ISNLYSS+SQWEKMSELRK 
Sbjct: 412 PATWRSLLKGCKKKKLPNLGEIVARYLLQLEPLNAENYIVISNLYSSVSQWEKMSELRKE 471

Query: 421 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDV 480
           MKE  +KP+PGCSSIEVDGVVHEFVMGDQSHPEVK+LREFMEEM+ RV DSGYRPS+SDV
Sbjct: 472 MKENGVKPIPGCSSIEVDGVVHEFVMGDQSHPEVKILREFMEEMAKRVWDSGYRPSVSDV 531

Query: 481 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 540
           LHKV+ EEKE AL EHSERFAIAYGLLKTRAPVVIRVVKNLRVC DCHEVIKIISK+YER
Sbjct: 532 LHKVMYEEKEGALGEHSERFAIAYGLLKTRAPVVIRVVKNLRVCGDCHEVIKIISKIYER 591

Query: 541 EIIVRDRVRFHKFIKGTCSCKDFW 564
           EIIVRDRVRFHKF++GTCSCKD+W
Sbjct: 592 EIIVRDRVRFHKFVEGTCSCKDYW 615

[Close]

BLAST of Chy4G084490 vs. TAIR 10
Match: AT1G59720.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 464.5 bits (1194), Expect = 1.2e-130
Identity = 244/581 (42.00%), Postives = 363/581 (62.48%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLS-SFAFALSKIVAFCALSPFGNINYARSVFAQIPHPNIFSWN 60
           M  L+QLHA  L    P   +  F   KI+     S F ++NYA  VF  I + + F WN
Sbjct: 61  MSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIENHSSFMWN 120

Query: 61  SLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVL 120
           +LI+  +   +  +E   L++K+ E G   P+  T  FVLKACA +  F EG QVH  ++
Sbjct: 121 TLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIV 180

Query: 121 KDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAME 180
           K GFG  ++V   L++ YG C  +  ARKVF+EMP R+LV+W +MI    R G  D A++
Sbjct: 181 KHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQ 240

Query: 181 LFREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEK---YFVLTDLELSTALVD 240
           LFREMQ++  +PD  T+ SV+SACA  G+L +G W HA++ +     V  D+ +  +L++
Sbjct: 241 LFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIE 300

Query: 241 MYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLE--TEVTPDH 300
           MY KCG +  A+QVF  M  +D  +W++MI+GFA HG A++A++ F +M++    V P+ 
Sbjct: 301 MYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNS 360

Query: 301 VTFLAVLSACAHGGLVSRGRRFWSLML-EFGIEPSVEHYGCKVDLLCRSGLVEEAYRINT 360
           VTF+ +L AC H G V++GR+++ +M+ ++ IEP++EHYGC VDL+ R+G + EA  +  
Sbjct: 361 VTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVM 420

Query: 361 TMKIPPNAATWRSLLMG-CKKKRLLNLGEIVARYLLELEPLNAEN-------YIMISNLY 420
           +M + P+A  WRSLL   CKK   + L E +AR ++  +  N  +       Y+++S +Y
Sbjct: 421 SMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVY 480

Query: 421 SSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMS 480
           +S S+W  +  +RK+M E  I+  PGCSSIE++G+ HEF  GD SHP+ K + + ++ + 
Sbjct: 481 ASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVID 540

Query: 481 MRVQDSGYRP--SISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRV 540
            R++  GY P  S + ++    D  KE +L  HSER AIA+GL+       IR+ KNLRV
Sbjct: 541 DRLRSIGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRV 600

Query: 541 CVDCHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 565
           C DCHEV K+ISK++  EIIVRDRVRFH F  G+CSC D+W
Sbjct: 601 CNDCHEVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638

[Close]

BLAST of Chy4G084490 vs. TAIR 10
Match: AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 462.6 bits (1189), Expect = 4.5e-130
Identity = 250/613 (40.78%), Postives = 365/613 (59.54%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPF--GNINYARSVFAQIPHPNIFSW 60
           +R L Q+HA  +       + A A  +I+ FCA S     +++YA  +F Q+P  N FSW
Sbjct: 36  IRDLSQIHAVFIKSGQMRDTLAAA--EILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSW 95

Query: 61  NSLIKGYSQI-HTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSH 120
           N++I+G+S+     +   I LF ++    +  PN FT   VLKACA      EG Q+H  
Sbjct: 96  NTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGL 155

Query: 121 VLKDGFGSSLFVQTSLVNFYGKC------------------------------------- 180
            LK GFG   FV ++LV  Y  C                                     
Sbjct: 156 ALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNV 215

Query: 181 --------EEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPD 240
                    +   AR +F++M  R++V+W  MISG++  G   +A+E+FREM+K  I+P+
Sbjct: 216 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 275

Query: 241 AMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAKCGCIERAKQVFV 300
            +TLVSV+ A +  G+L++G WLH Y E   +  D  L +AL+DMY+KCG IE+A  VF 
Sbjct: 276 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 335

Query: 301 HMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSR 360
            +P ++   WS+MI GFA HG A DAID F +M +  V P  V ++ +L+AC+HGGLV  
Sbjct: 336 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 395

Query: 361 GRRFWSLMLEF-GIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPNAATWRSLLMGC 420
           GRR++S M+   G+EP +EHYGC VDLL RSGL++EA      M I P+   W++LL  C
Sbjct: 396 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGAC 455

Query: 421 KKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPG 480
           + +  + +G+ VA  L+++ P ++  Y+ +SN+Y+S   W ++SE+R  MKEK I+  PG
Sbjct: 456 RMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPG 515

Query: 481 CSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDVLHKVVDEEKEC 540
           CS I++DGV+HEFV+ D SHP+ K +   + E+S +++ +GYRP  + VL  + +E+KE 
Sbjct: 516 CSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKEN 575

Query: 541 ALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYEREIIVRDRVRFH 565
            L  HSE+ A A+GL+ T     IR+VKNLR+C DCH  IK+ISK+Y+R+I VRDR RFH
Sbjct: 576 VLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFH 635

[Close]

BLAST of Chy4G084490 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 457.2 bits (1175), Expect = 1.9e-128
Identity = 222/530 (41.89%), Postives = 343/530 (64.72%), Query Frame = 0


Query: 38  GNINYARSVFAQIPHPNIFSWNSLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAF 97
           G I  A+ +F +IP  ++ SWN++I GY++     KE + LFK + +T    P+  T+  
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNY-KEALELFKDMMKTNVR-PDESTMVT 273

Query: 98  VLKACAIVTAFGEGLQVHSHVLKDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRN 157
           V+ ACA   +   G QVH  +   GFGS+L +  +L++ Y KC E+  A  +FE +P ++
Sbjct: 274 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD 333

Query: 158 LVAWTAMISGHARVGAVDEAMELFREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHA 217
           +++W  +I G+  +    EA+ LF+EM ++G  P+ +T++S++ ACA  GA+DIG W+H 
Sbjct: 334 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 393

Query: 218 YIEKYF--VLTDLELSTALVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLA 277
           YI+K    V     L T+L+DMYAKCG IE A QVF  +  K  ++W++MI GFA HG A
Sbjct: 394 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 453

Query: 278 QDAIDAFQQMLETEVTPDHVTFLAVLSACAHGGLVSRGRR-FWSLMLEFGIEPSVEHYGC 337
             + D F +M +  + PD +TF+ +LSAC+H G++  GR  F ++  ++ + P +EHYGC
Sbjct: 454 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC 513

Query: 338 KVDLLCRSGLVEEAYRINTTMKIPPNAATWRSLLMGCKKKRLLNLGEIVARYLLELEPLN 397
            +DLL  SGL +EA  +   M++ P+   W SLL  CK    + LGE  A  L+++EP N
Sbjct: 514 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 573

Query: 398 AENYIMISNLYSSLSQWEKMSELRKVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEV 457
             +Y+++SN+Y+S  +W ++++ R ++ +K +K VPGCSSIE+D VVHEF++GD+ HP  
Sbjct: 574 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 633

Query: 458 KMLREFMEEMSMRVQDSGYRPSISDVLHKVVDEEKECALSEHSERFAIAYGLLKTRAPVV 517
           + +   +EEM + ++ +G+ P  S+VL ++ +E KE AL  HSE+ AIA+GL+ T+    
Sbjct: 634 REIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTK 693

Query: 518 IRVVKNLRVCVDCHEVIKIISKLYEREIIVRDRVRFHKFIKGTCSCKDFW 565
           + +VKNLRVC +CHE  K+ISK+Y+REII RDR RFH F  G CSC D+W
Sbjct: 694 LTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

[Close]

BLAST of Chy4G084490 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 453.8 bits (1166), Expect = 2.1e-127
Identity = 233/564 (41.31%), Postives = 357/564 (63.30%), Query Frame = 0


Query: 4   LRQLHAHILTRPLPLSSFAFALSKIVAFCALSPFGNINYARSVFAQIPHP-NIFSWNSLI 63
           LRQ+HA  +   + +S        I    +L     ++YA  VF++I  P N+F WN+LI
Sbjct: 33  LRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLI 92

Query: 64  KGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVLKDG 123
           +GY++I   S     L++++  +G   P++ T  F++KA   +     G  +HS V++ G
Sbjct: 93  RGYAEIGN-SISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSG 152

Query: 124 FGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFR 183
           FGS ++VQ SL++ Y  C ++  A KVF++MP ++LVAW ++I+G A  G  +EA+ L+ 
Sbjct: 153 FGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYT 212

Query: 184 EMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYAKCG 243
           EM   GI+PD  T+VS++SACA  GAL +G  +H Y+ K  +  +L  S  L+D+YA+CG
Sbjct: 213 EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG 272

Query: 244 CIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETE-VTPDHVTFLAVL 303
            +E AK +F  M  K++ +W+S+I+G A +G  ++AI+ F+ M  TE + P  +TF+ +L
Sbjct: 273 RVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGIL 332

Query: 304 SACAHGGLVSRGRRFWSLML-EFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIPPN 363
            AC+H G+V  G  ++  M  E+ IEP +EH+GC VDLL R+G V++AY    +M + PN
Sbjct: 333 YACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPN 392

Query: 364 AATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELRKV 423
              WR+LL  C      +L E     +L+LEP ++ +Y+++SN+Y+S  +W  + ++RK 
Sbjct: 393 VVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQ 452

Query: 424 MKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSISDV 483
           M    +K VPG S +EV   VHEF+MGD+SHP+   +   ++EM+ R++  GY P IS+V
Sbjct: 453 MLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNV 512

Query: 484 LHKVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKLYER 543
              V +EEKE A+  HSE+ AIA+ L+ T     I VVKNLRVC DCH  IK++SK+Y R
Sbjct: 513 YVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNR 572

Query: 544 EIIVRDRVRFHKFIKGTCSCKDFW 565
           EI+VRDR RFH F  G+CSC+D+W
Sbjct: 573 EIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of Chy4G084490 vs. TAIR 10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 453.4 bits (1165), Expect = 2.7e-127
Identity = 238/567 (41.98%), Postives = 359/567 (63.32%), Query Frame = 0


Query: 1   MRVLRQLHAHILTRPLPLSSFAFALSKIVAFCALSPF-GNINYARSVFAQIPHPNIFSWN 60
           +R L Q+ A+ +   +   SF   ++K++ FC  SP   +++YAR +F  +  P+I  +N
Sbjct: 42  LRELMQIQAYAIKSHIEDVSF---VAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFN 101

Query: 61  SLIKGYSQIHTLSKEPIFLFKKLTETGYPVPNSFTLAFVLKACAIVTAFGEGLQVHSHVL 120
           S+ +GYS+  T   E   LF ++ E G  +P+++T   +LKACA+  A  EG Q+H   +
Sbjct: 102 SMARGYSRF-TNPLEVFSLFVEILEDGI-LPDNYTFPSLLKACAVAKALEEGRQLHCLSM 161

Query: 121 KDGFGSSLFVQTSLVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAME 180
           K G   +++V  +L+N Y +CE++  AR VF+ +    +V + AMI+G+AR    +EA+ 
Sbjct: 162 KLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALS 221

Query: 181 LFREMQKAGIQPDAMTLVSVVSACAVAGALDIGCWLHAYIEKYFVLTDLELSTALVDMYA 240
           LFREMQ   ++P+ +TL+SV+S+CA+ G+LD+G W+H Y +K+     ++++TAL+DM+A
Sbjct: 222 LFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFA 281

Query: 241 KCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPDHVTFLA 300
           KCG ++ A  +F  M  KDT AWS+MI+ +A HG A+ ++  F++M    V PD +TFL 
Sbjct: 282 KCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLG 341

Query: 301 VLSACAHGGLVSRGRRFWSLML-EFGIEPSVEHYGCKVDLLCRSGLVEEAYRINTTMKIP 360
           +L+AC+H G V  GR+++S M+ +FGI PS++HYG  VDLL R+G +E+AY     + I 
Sbjct: 342 LLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPIS 401

Query: 361 PNAATWRSLLMGCKKKRLLNLGEIVARYLLELEPLNAENYIMISNLYSSLSQWEKMSELR 420
           P    WR LL  C     L+L E V+  + EL+  +  +Y+++SNLY+   +WE +  LR
Sbjct: 402 PTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLR 461

Query: 421 KVMKEKCIKPVPGCSSIEVDGVVHEFVMGDQSHPEVKMLREFMEEMSMRVQDSGYRPSIS 480
           KVMK++    VPGCSSIEV+ VVHEF  GD        L   ++EM   ++ SGY P  S
Sbjct: 462 KVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTS 521

Query: 481 DVLH-KVVDEEKECALSEHSERFAIAYGLLKTRAPVVIRVVKNLRVCVDCHEVIKIISKL 540
            V+H  + D+EKE  L  HSE+ AI +GLL T     IRVVKNLRVC DCH   K+IS +
Sbjct: 522 MVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLI 581

Query: 541 YEREIIVRDRVRFHKFIKGTCSCKDFW 565
           + R++++RD  RFH F  G CSC DFW
Sbjct: 582 FGRKVVLRDVQRFHHFEDGKCSCGDFW 603

The following BLAST results are available for this feature:

BLAST of Chy4G084490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WQW5	1.7e-129	42.00	Pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
Q9FI80	6.3e-129	40.78	Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	2.7e-127	41.89	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
A8MQA3	2.9e-126	41.31	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]
Q8LK93	3.8e-126	41.98	Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop...	[more]

BLAST of Chy4G084490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF80	0.0e+00	99.11	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G8127...	[more]
A0A5D3DQ32	0.0e+00	96.45	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3B831	0.0e+00	96.45	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
A0A6J1DL35	2.6e-279	83.69	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
A0A6J1J7L0	1.3e-278	84.93	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]

BLAST of Chy4G084490 vs. NCBI nr


Match Name	Identity	Description
XP_031737591.1	97.21	pentatricopeptide repeat-containing protein At4g21065 [Cucumis sativus]	[more]
KAA0043682.1	96.45	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25449...	[more]
XP_008443148.2	96.45	PREDICTED: pentatricopeptide repeat-containing protein At1g59720, chloroplastic/...	[more]
XP_038904476.1	90.96	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]
XP_023528910.1	84.93	pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondri...	[more]

BLAST of Chy4G084490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G59720.1	1.2e-130	42.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G48910.1	4.5e-130	40.78	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G08070.1	1.9e-128	41.89	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21065.1	2.1e-127	41.31	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G02980.1	2.7e-127	41.98	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 231..442 e-value: 1.4E-37 score: 131.7 coord: 72..230 e-value: 1.4E-29 score: 105.5
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 430..553 e-value: 5.1E-37 score: 126.6
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 157..204 e-value: 1.2E-12 score: 47.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 295..325 e-value: 0.22 score: 11.9 coord: 261..287 e-value: 0.0017 score: 18.5 coord: 232..255 e-value: 0.043 score: 14.1
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 295..329 e-value: 1.9E-4 score: 19.4 coord: 261..293 e-value: 0.0015 score: 16.6 coord: 159..193 e-value: 2.9E-9 score: 34.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 293..327 score: 9.909073
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 258..292 score: 10.13926
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 157..191 score: 13.701682
None	No IPR available	PANTHER	PTHR47926:SF147	OS01G0814300 PROTEIN	coord: 1..550
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 1..550

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G084490.1	Chy4G084490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding