Homology
BLAST of Chy4G084030 vs. ExPASy Swiss-Prot
Match:
Q9FHK9 (Probable mediator of RNA polymerase II transcription subunit 26b OS=Arabidopsis thaliana OX=3702 GN=MED26B PE=2 SV=1)
HSP 1 Score: 334.7 bits (857), Expect = 1.6e-90
Identity = 231/466 (49.57%), Postives = 286/466 (61.37%), Query Frame = 0
Query: 5 SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGC 64
SGSLDSWR YF R +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GC
Sbjct: 4 SGSLDSWREYFRRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVNRCVGC 63
Query: 65 DRVELAVAGDIDGDDGETGFKSDFARDGCEFE-AGGSKESKVYSSRDDIGEMNCNRVSNF 124
D +EL+V GD + + G TG ++E AGGSKESK SSR D N VSN+
Sbjct: 64 DHLELSVPGDDEANRGTTGNGGGGTAVDEDYEVAGGSKESKANSSRGD----NNQIVSNY 123
Query: 125 SFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQAT 184
+F EAEAL+DEIE+ S + EV RIKEIL N EDE + VL +SLR L+LM+L+VD L++T
Sbjct: 124 TFDEAEALSDEIEEFSVVSKEVARIKEILLNKEDEPNSVLLDSLRHLKLMSLNVDILKST 183
Query: 185 EIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKE 244
EIGKAVN LRKH S +IR LA+ LI EWKE+VD WV T + GAE TP+S N S
Sbjct: 184 EIGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTPESANPSVL--- 243
Query: 245 EDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSN 304
EEE PS P D FT +P E+S FFD +D DGNPRNS + +R + R+ N
Sbjct: 244 ---DEEEAFPSLPYD-VDIFTPEPNGFEISHFFDSLDFDGNPRNSEEHNTSREHERRPQN 303
Query: 305 GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNN-KPSSNTNSE-LLRPQKLSSEQKD 364
+ K TQM+ Q + KPSS T+ + RP K S+EQ+
Sbjct: 304 IAKR----------------KPEGTQMRIQDAPFRSIKPSSATDFDGTRRPVKQSTEQRM 363
Query: 365 NHEKFQ-RKLEKPTIPKR------------NQQDNFKCSDEVAVQVKLEATKRKLQESYQ 424
+E K EKP I ++ QQ+ K D K E KRKLQESYQ
Sbjct: 364 KNETVSVHKSEKPMIQRKPVVTEQKRKAPGPQQEKLKGLD---ADAKFEFAKRKLQESYQ 423
Query: 425 QAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF-NRNWANGRR 453
ENAKKQRTIQV+E+ +PKQG + P LK G NRNWANGR+
Sbjct: 424 HHENAKKQRTIQVLEM--IPKQGSAQK-PQLKRPGMSNRNWANGRK 436
BLAST of Chy4G084030 vs. ExPASy Swiss-Prot
Match:
F4J4Y5 (Probable mediator of RNA polymerase II transcription subunit 26a OS=Arabidopsis thaliana OX=3702 GN=MED26A PE=3 SV=1)
HSP 1 Score: 248.4 bits (633), Expect = 1.5e-64
Identity = 183/432 (42.36%), Postives = 243/432 (56.25%), Query Frame = 0
Query: 5 SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCD 64
S SLD+WR YFR +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD
Sbjct: 7 SVSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCD 66
Query: 65 RVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFSF 124
+EL++AGD + A + GG +
Sbjct: 67 HLELSIAGD------------EAAVEIVGVGGGGDR------------------------ 126
Query: 125 GEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEI 184
G++ T E E+ S V EV+RI++IL+N +DE D VL ESLR+LE M++SVD L+ TEI
Sbjct: 127 GDSGVATGEGEEASVSVDEVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEI 186
Query: 185 GKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEED 244
GKAVN LR+H S +I LA+ L EWK +VD W+ + G E TP+S N S
Sbjct: 187 GKAVNGLRRHSSDKISKLAKTLFAEWKRLVDQWMNTPEEMAGTEGTPESLNLSVI----- 246
Query: 245 DYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGN 304
EEE PSPP D + +P ELSQ D +D DGNPR+S V++++ + S+
Sbjct: 247 -DEEEAFPSPPHD-LDIYAPEPNGFELSQILDCLDCDGNPRHS---VESKHERKSQSSAG 306
Query: 305 QNPTRCNQQTTREVNVLSK---ENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDN 364
+ P + T + NV+ + + +T+ +E V+P K S+ E R K S EQ +
Sbjct: 307 RRP-----KGTNDANVVGRYCNDQQTRREEADVRP-MKHSATDVVEPKRQTKQSREQMVS 366
Query: 365 HEKFQRKLEKPTIPKRN----QQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRT 424
QRK T KR QQD K D K E KRKLQESY Q ENAK+QRT
Sbjct: 367 --AIQRKPTAVTEQKRKLAGPQQDKLKALDP---DSKFEFAKRKLQESYHQHENAKRQRT 379
Query: 425 IQVMELHDLPKQ 430
IQV+E +PKQ
Sbjct: 427 IQVLE--TIPKQ 379
BLAST of Chy4G084030 vs. ExPASy Swiss-Prot
Match:
F4KFC7 (Probable mediator of RNA polymerase II transcription subunit 26c OS=Arabidopsis thaliana OX=3702 GN=MED26C PE=1 SV=1)
HSP 1 Score: 109.0 bits (271), Expect = 1.4e-22
Identity = 119/443 (26.86%), Postives = 187/443 (42.21%), Query Frame = 0
Query: 8 LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-- 67
LD +R+ NA D++ ID AILVA+ D +E + RRD I E+L++ + +C CD
Sbjct: 3 LDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCDFG 62
Query: 68 ----RVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 127
E A+ +G E + D +E ++ +++ E + N
Sbjct: 63 GGGNVTEAAIGRVNNGRVHEETEEED-------------EEGVTAAAEEEVREKSVNVED 122
Query: 128 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 187
+ F L D+ EQ+S ++ IKE L + D S+ L E L+ LE M ++ LQ
Sbjct: 123 DDDFDPFAGLFDD-EQKS-----IVEIKEKLED-PDLSEESLVELLQNLEDMDITFQALQ 182
Query: 188 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAV 247
T+IG+ VN +RKH S +R LA+ L+ +WKE VD WV+ Q ++ P S +
Sbjct: 183 ETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWVKFN---QPGDLEPPS-----LI 242
Query: 248 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 307
+ED ++ L + + F P
Sbjct: 243 ADEDSPVQKALHNGSRQQVPDFGYSP---------------------------------- 302
Query: 308 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKD 367
V N SS+ NS + P++
Sbjct: 303 ---------------------------------VPQNGYSSSSKNSNITEPERKPRPVAP 339
Query: 368 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 427
+ KP+ P +QQ + D+ +V + +++LQ++Y+QAENAKKQRTIQV
Sbjct: 363 QPRRESPSPAKPSRPSPSQQTIPR--DKEHKEVDFDTARKRLQQNYRQAENAKKQRTIQV 339
Query: 428 MELHDLPKQGIGHRNPHLKSGGF 444
M++HD+PK K GGF
Sbjct: 423 MDIHDIPKP---------KKGGF 339
BLAST of Chy4G084030 vs. ExPASy Swiss-Prot
Match:
Q8CB77 (Elongin-A OS=Mus musculus OX=10090 GN=Eloa PE=1 SV=3)
HSP 1 Score: 47.8 bits (112), Expect = 3.9e-04
Identity = 31/96 (32.29%), Postives = 53/96 (55.21%), Query Frame = 0
Query: 162 LFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQAT 221
L + L++L ++ ++VD L T +GK VN RKH +++ + AR L+ +WK++V V +
Sbjct: 26 LLKYLKKLSILPITVDILVETGVGKTVNSFRKH--EQVGNFARDLVAQWKKLVPVERNSE 85
Query: 222 AAVQGAEVTPDSKNKSAAVKEEDD----YEEEGLPS 254
A Q E K A++ E++ Y+E PS
Sbjct: 86 AEDQDFEKNNSRKRPRDALQREEELEGNYQESWKPS 119
BLAST of Chy4G084030 vs. ExPASy Swiss-Prot
Match:
Q14241 (Elongin-A OS=Homo sapiens OX=9606 GN=ELOA PE=1 SV=2)
HSP 1 Score: 47.4 bits (111), Expect = 5.1e-04
Identity = 29/86 (33.72%), Postives = 48/86 (55.81%), Query Frame = 0
Query: 162 LFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQAT 221
L + L++L + ++VD L T +GK VN LRKH + + AR L+ +WK++V V A
Sbjct: 52 LLKYLKKLSTLPITVDILAETGVGKTVNSLRKH--EHVGSFARDLVAQWKKLVPVERNAE 111
Query: 222 AAVQGAEVTPDSKNKSAAVKEEDDYE 248
Q E + K A+++E++ E
Sbjct: 112 PDEQDFEKSNSRKRPRDALQKEEEME 135
BLAST of Chy4G084030 vs. ExPASy TrEMBL
Match:
A0A0A0LBK9 (TFIIS N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G817210 PE=4 SV=1)
HSP 1 Score: 866.3 bits (2237), Expect = 5.6e-248
Identity = 447/452 (98.89%), Postives = 449/452 (99.34%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDF RDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFVRDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAV 240
ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVD+WVQATAAVQGAEVTPDSKNKSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDLWVQATAAVQGAEVTPDSKNKSAAV 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
Query: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKD 360
SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNS LLR QKLS+EQKD
Sbjct: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRAQKLSTEQKD 360
Query: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
Sbjct: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
Query: 421 MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 453
MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
Sbjct: 421 MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 452
BLAST of Chy4G084030 vs. ExPASy TrEMBL
Match:
A0A5A7UDQ2 (Putative mediator of RNA polymerase II transcription subunit 26b OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006410 PE=4 SV=1)
HSP 1 Score: 856.7 bits (2212), Expect = 4.5e-245
Identity = 443/452 (98.01%), Postives = 447/452 (98.89%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDFA DGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESD VLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAV 240
ATEIGKAVNCLRKHGSKRIRHLARVLIMEWK+MVDVWVQATAAVQGAEVTPDSK+KSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
Query: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKD 360
SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNS LLR QKLS+EQKD
Sbjct: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD 360
Query: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
Sbjct: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
Query: 421 MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 453
MELHDLPKQGIGHRNPHLKSGGFNR+W NGRR
Sbjct: 421 MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 452
BLAST of Chy4G084030 vs. ExPASy TrEMBL
Match:
A0A1S3B7K4 (probable mediator of RNA polymerase II transcription subunit 26b OS=Cucumis melo OX=3656 GN=LOC103486863 PE=4 SV=1)
HSP 1 Score: 856.7 bits (2212), Expect = 4.5e-245
Identity = 443/452 (98.01%), Postives = 447/452 (98.89%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDFA DGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESD VLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAV 240
ATEIGKAVNCLRKHGSKRIRHLARVLIMEWK+MVDVWVQATAAVQGAEVTPDSK+KSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
Query: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKD 360
SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNS LLR QKLS+EQKD
Sbjct: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD 360
Query: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
Sbjct: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
Query: 421 MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 453
MELHDLPKQGIGHRNPHLKSGGFNR+W NGRR
Sbjct: 421 MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 452
BLAST of Chy4G084030 vs. ExPASy TrEMBL
Match:
A0A6J1I7W1 (probable mediator of RNA polymerase II transcription subunit 26b OS=Cucurbita maxima OX=3661 GN=LOC111469992 PE=4 SV=1)
HSP 1 Score: 715.7 bits (1846), Expect = 1.2e-202
Identity = 384/458 (83.84%), Postives = 411/458 (89.74%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MSAKSGSLDYWRDYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGD+ D ETGFKSD A DG FE GGSKESKVYSSRDD GEMN N+VS
Sbjct: 61 LGCDRVELAVAGDV---DCETGFKSDSAGDGRAFEGGGSKESKVYSSRDDGGEMNFNQVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
N+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVD LQ
Sbjct: 121 NYSFGEAEALTDEIEQESEIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDALQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAV 240
ATEIGKAVN LRKHGSKRIRHL R LI EWKEMVD+WV+ATAAV G+EVTPDSK+ A+
Sbjct: 181 ATEIGKAVNGLRKHGSKRIRHLVRFLITEWKEMVDLWVKATAAVHGSEVTPDSKSMPASE 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
+EEDDY E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RKT
Sbjct: 241 QEEDDY-EDGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGEFVKERDNGRKT 300
Query: 301 SNGNQNPTRCNQQTTREVNVL------SKENKTQMKEQVVKPNNKPSSNTNSELLRPQKL 360
SNG+QNP RC QQTTREVNV+ SK+NK+QMKEQVVKP NKP SN NS L RPQK
Sbjct: 301 SNGSQNPMRCKQQTTREVNVVAKDNRESKDNKSQMKEQVVKP-NKPPSNANSGLSRPQKP 360
Query: 361 SSEQKDNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKK 420
S+ QKDNHEK QRK+EKPTIPKR+ QD FKCSDEVAVQVKLEATKRKLQESYQQAENAKK
Sbjct: 361 STVQKDNHEKLQRKVEKPTIPKRSLQDKFKCSDEVAVQVKLEATKRKLQESYQQAENAKK 420
Query: 421 QRTIQVMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 453
QRTIQVMELHD+PKQG+GHRN HLKSGG NR+W NGRR
Sbjct: 421 QRTIQVMELHDIPKQGMGHRNVHLKSGGHNRHWTNGRR 453
BLAST of Chy4G084030 vs. ExPASy TrEMBL
Match:
A0A6J1FCK1 (probable mediator of RNA polymerase II transcription subunit 26b OS=Cucurbita moschata OX=3662 GN=LOC111442859 PE=4 SV=1)
HSP 1 Score: 715.7 bits (1846), Expect = 1.2e-202
Identity = 380/452 (84.07%), Postives = 409/452 (90.49%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
M+AKSGSLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MSAKSGSLDYWRDYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGD+ DGETGFKSD A DG FE GGSKESKVYSSRDD GEMN N+VS
Sbjct: 61 LGCDRVELAVAGDV---DGETGFKSDSAGDGRAFEGGGSKESKVYSSRDDGGEMNFNQVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
N+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVD LQ
Sbjct: 121 NYSFGEAEALTDEIEQESEIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDALQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAV 240
ATEIGKAVN LRKHGSKRIRHL R LI EWKEMVD+WV+ATAAV G+EVTPDSK+ +
Sbjct: 181 ATEIGKAVNGLRKHGSKRIRHLVRFLITEWKEMVDMWVKATAAVHGSEVTPDSKSMPVSE 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
+EEDDY E+GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK R+N RKT
Sbjct: 241 QEEDDY-EDGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGEFVKKRDNGRKT 300
Query: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKD 360
S+G+QNP RC QQTTREVNV++K+NK+QMKEQVVKP NKP SN NS R QK S+ QKD
Sbjct: 301 SSGSQNPMRCKQQTTREVNVVAKDNKSQMKEQVVKP-NKPPSNANSGFSRLQKPSTVQKD 360
Query: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
NHEK QRK+EKPTIPKR+ QD FKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
Sbjct: 361 NHEKLQRKVEKPTIPKRSLQDKFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
Query: 421 MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 453
MELHD+PKQG+GHRN HLKSGG NR+W NGRR
Sbjct: 421 MELHDIPKQGMGHRNVHLKSGGHNRHWTNGRR 447
BLAST of Chy4G084030 vs. NCBI nr
Match:
XP_004136624.1 (probable mediator of RNA polymerase II transcription subunit 26b [Cucumis sativus] >KGN59410.1 hypothetical protein Csa_002527 [Cucumis sativus])
HSP 1 Score: 865 bits (2235), Expect = 0.0
Identity = 447/452 (98.89%), Postives = 449/452 (99.34%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDF RDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFVRDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAV 240
ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVD+WVQATAAVQGAEVTPDSKNKSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDLWVQATAAVQGAEVTPDSKNKSAAV 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
Query: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKD 360
SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNS LLR QKLS+EQKD
Sbjct: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRAQKLSTEQKD 360
Query: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
Sbjct: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
Query: 421 MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 452
MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR
Sbjct: 421 MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 452
BLAST of Chy4G084030 vs. NCBI nr
Match:
XP_008443218.1 (PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Cucumis melo] >KAA0053912.1 putative mediator of RNA polymerase II transcription subunit 26b [Cucumis melo var. makuwa] >TYK25493.1 putative mediator of RNA polymerase II transcription subunit 26b [Cucumis melo var. makuwa])
HSP 1 Score: 855 bits (2210), Expect = 2.79e-312
Identity = 443/452 (98.01%), Postives = 447/452 (98.89%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDFA DGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESD VLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDSVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAV 240
ATEIGKAVNCLRKHGSKRIRHLARVLIMEWK+MVDVWVQATAAVQGAEVTPDSK+KSAAV
Sbjct: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKDMVDVWVQATAAVQGAEVTPDSKSKSAAV 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT
Sbjct: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
Query: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKD 360
SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNS LLR QKLS+EQKD
Sbjct: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSGLLRQQKLSTEQKD 360
Query: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
Sbjct: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
Query: 421 MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 452
MELHDLPKQGIGHRNPHLKSGGFNR+W NGRR
Sbjct: 421 MELHDLPKQGIGHRNPHLKSGGFNRHWTNGRR 452
BLAST of Chy4G084030 vs. NCBI nr
Match:
XP_038904902.1 (probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Benincasa hispida])
HSP 1 Score: 816 bits (2108), Expect = 9.72e-297
Identity = 428/453 (94.48%), Postives = 439/453 (96.91%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDFA DGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAV 240
ATEIGKAVN LRKHGSK IRHLARVLIMEWKEMVD WV+ATAAVQGAEVTPDSKNKSA+V
Sbjct: 181 ATEIGKAVNGLRKHGSKHIRHLARVLIMEWKEMVDEWVKATAAVQGAEVTPDSKNKSASV 240
Query: 241 KEEDDYEEE-GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK 300
KEED+YEEE GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Sbjct: 241 KEEDNYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK 300
Query: 301 TSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQK 360
TSNGNQNP R NQQT EVNVL+KEN TQMKEQVVKPN +PSSNTNS LLRPQKLS+EQK
Sbjct: 301 TSNGNQNPVRSNQQTALEVNVLAKENMTQMKEQVVKPN-RPSSNTNSGLLRPQKLSTEQK 360
Query: 361 DNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ 420
DNHEKFQRKL+KPTIPKRNQQ N+KCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ
Sbjct: 361 DNHEKFQRKLDKPTIPKRNQQVNYKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ 420
Query: 421 VMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 452
VMELHDLPKQG+GHRNPHLKSGG+NRNWANGRR
Sbjct: 421 VMELHDLPKQGLGHRNPHLKSGGYNRNWANGRR 452
BLAST of Chy4G084030 vs. NCBI nr
Match:
XP_038904903.1 (probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Benincasa hispida])
HSP 1 Score: 807 bits (2085), Expect = 2.88e-293
Identity = 426/453 (94.04%), Postives = 437/453 (96.47%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGDIDGDDGETGFKSDFA DGCEFEAGGSKESKVYSSRDDIGEMNCNRVS
Sbjct: 61 LGCDRVELAVAGDIDGDDGETGFKSDFAGDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVDTLQ
Sbjct: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDTLQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAV 240
ATEIGKAVN LRKHGSK IRHLARVLIMEWKEMVD WV+ATAAVQ EVTPDSKNKSA+V
Sbjct: 181 ATEIGKAVNGLRKHGSKHIRHLARVLIMEWKEMVDEWVKATAAVQ--EVTPDSKNKSASV 240
Query: 241 KEEDDYEEE-GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK 300
KEED+YEEE GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK
Sbjct: 241 KEEDNYEEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRK 300
Query: 301 TSNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQK 360
TSNGNQNP R NQQT EVNVL+KEN TQMKEQVVKPN +PSSNTNS LLRPQKLS+EQK
Sbjct: 301 TSNGNQNPVRSNQQTALEVNVLAKENMTQMKEQVVKPN-RPSSNTNSGLLRPQKLSTEQK 360
Query: 361 DNHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ 420
DNHEKFQRKL+KPTIPKRNQQ N+KCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ
Sbjct: 361 DNHEKFQRKLDKPTIPKRNQQVNYKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQ 420
Query: 421 VMELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 452
VMELHDLPKQG+GHRNPHLKSGG+NRNWANGRR
Sbjct: 421 VMELHDLPKQGLGHRNPHLKSGGYNRNWANGRR 450
BLAST of Chy4G084030 vs. NCBI nr
Match:
XP_023539160.1 (probable mediator of RNA polymerase II transcription subunit 26b [Cucurbita pepo subsp. pepo])
HSP 1 Score: 721 bits (1861), Expect = 3.36e-259
Identity = 383/452 (84.73%), Postives = 410/452 (90.71%), Query Frame = 0
Query: 1 MAAKSGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
M+AKS SLD WR+YFRNANSDIF +IDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC
Sbjct: 1 MSAKSASLDYWRDYFRNANSDIFSLIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRC 60
Query: 61 LGCDRVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 120
LGCDRVELAVAGD+DG ETGFKSD A DG FE GGSKESKVYSSRDD GEMN N+VS
Sbjct: 61 LGCDRVELAVAGDVDG---ETGFKSDSAGDGRAFEGGGSKESKVYSSRDDGGEMNFNQVS 120
Query: 121 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 180
N+SFGEAEALTDEIEQES+IVGEVLRIKEILNNFE+ESD VLFESLRRLELMALSVD LQ
Sbjct: 121 NYSFGEAEALTDEIEQESEIVGEVLRIKEILNNFEEESDSVLFESLRRLELMALSVDALQ 180
Query: 181 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAV 240
ATEIGKAVN LRKHGSKRIRHL R LI EWKEMVD+WV+ATAAV G+EVTPDSK+ A+
Sbjct: 181 ATEIGKAVNGLRKHGSKRIRHLVRFLITEWKEMVDMWVKATAAVHGSEVTPDSKSMPASE 240
Query: 241 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 300
+EEDDYE+ GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSG+FVK +N RKT
Sbjct: 241 QEEDDYED-GLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGEFVKKHDNGRKT 300
Query: 301 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKD 360
SNG+QNP RC QQTTREVNV++K+NK+QMKEQVVKPN KP SN NS L RPQK SS QKD
Sbjct: 301 SNGSQNPMRCKQQTTREVNVVAKDNKSQMKEQVVKPN-KPPSNANSGLSRPQKPSSVQKD 360
Query: 361 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
NHEK QRK+EKPTIPKR+ QD FKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV
Sbjct: 361 NHEKLQRKVEKPTIPKRSLQDKFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 420
Query: 421 MELHDLPKQGIGHRNPHLKSGGFNRNWANGRR 452
MELHD+PKQG+GHRN HLKSGG NR+W NGRR
Sbjct: 421 MELHDIPKQGMGHRNVHLKSGGHNRHWTNGRR 447
BLAST of Chy4G084030 vs. TAIR 10
Match:
AT5G05140.1 (Transcription elongation factor (TFIIS) family protein )
HSP 1 Score: 334.7 bits (857), Expect = 1.1e-91
Identity = 231/466 (49.57%), Postives = 286/466 (61.37%), Query Frame = 0
Query: 5 SGSLDSWRNYF-RNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGC 64
SGSLDSWR YF R +SDIFGIID+AI+VAA+DCP +F+ RRD+IAE LFSCR+ RC+GC
Sbjct: 4 SGSLDSWREYFRRRGDSDIFGIIDHAIMVAATDCPNKFKSRRDKIAELLFSCRVNRCVGC 63
Query: 65 DRVELAVAGDIDGDDGETGFKSDFARDGCEFE-AGGSKESKVYSSRDDIGEMNCNRVSNF 124
D +EL+V GD + + G TG ++E AGGSKESK SSR D N VSN+
Sbjct: 64 DHLELSVPGDDEANRGTTGNGGGGTAVDEDYEVAGGSKESKANSSRGD----NNQIVSNY 123
Query: 125 SFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQAT 184
+F EAEAL+DEIE+ S + EV RIKEIL N EDE + VL +SLR L+LM+L+VD L++T
Sbjct: 124 TFDEAEALSDEIEEFSVVSKEVARIKEILLNKEDEPNSVLLDSLRHLKLMSLNVDILKST 183
Query: 185 EIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKE 244
EIGKAVN LRKH S +IR LA+ LI EWKE+VD WV T + GAE TP+S N S
Sbjct: 184 EIGKAVNGLRKHSSDKIRQLAKTLIAEWKELVDQWVNTTKEITGAEGTPESANPSVL--- 243
Query: 245 EDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSN 304
EEE PS P D FT +P E+S FFD +D DGNPRNS + +R + R+ N
Sbjct: 244 ---DEEEAFPSLPYD-VDIFTPEPNGFEISHFFDSLDFDGNPRNSEEHNTSREHERRPQN 303
Query: 305 GNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNN-KPSSNTNSE-LLRPQKLSSEQKD 364
+ K TQM+ Q + KPSS T+ + RP K S+EQ+
Sbjct: 304 IAKR----------------KPEGTQMRIQDAPFRSIKPSSATDFDGTRRPVKQSTEQRM 363
Query: 365 NHEKFQ-RKLEKPTIPKR------------NQQDNFKCSDEVAVQVKLEATKRKLQESYQ 424
+E K EKP I ++ QQ+ K D K E KRKLQESYQ
Sbjct: 364 KNETVSVHKSEKPMIQRKPVVTEQKRKAPGPQQEKLKGLD---ADAKFEFAKRKLQESYQ 423
Query: 425 QAENAKKQRTIQVMELHDLPKQGIGHRNPHLKSGGF-NRNWANGRR 453
ENAKKQRTIQV+E+ +PKQG + P LK G NRNWANGR+
Sbjct: 424 HHENAKKQRTIQVLEM--IPKQGSAQK-PQLKRPGMSNRNWANGRK 436
BLAST of Chy4G084030 vs. TAIR 10
Match:
AT3G10820.2 (Transcription elongation factor (TFIIS) family protein )
HSP 1 Score: 248.4 bits (633), Expect = 1.1e-65
Identity = 183/432 (42.36%), Postives = 243/432 (56.25%), Query Frame = 0
Query: 5 SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCD 64
S SLD+WR YFR +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD
Sbjct: 7 SVSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCD 66
Query: 65 RVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFSF 124
+EL++AGD + A + GG +
Sbjct: 67 HLELSIAGD------------EAAVEIVGVGGGGDR------------------------ 126
Query: 125 GEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEI 184
G++ T E E+ S V EV+RI++IL+N +DE D VL ESLR+LE M++SVD L+ TEI
Sbjct: 127 GDSGVATGEGEEASVSVDEVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEI 186
Query: 185 GKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEED 244
GKAVN LR+H S +I LA+ L EWK +VD W+ + G E TP+S N S
Sbjct: 187 GKAVNGLRRHSSDKISKLAKTLFAEWKRLVDQWMNTPEEMAGTEGTPESLNLSVI----- 246
Query: 245 DYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKTSNGN 304
EEE PSPP D + +P ELSQ D +D DGNPR+S V++++ + S+
Sbjct: 247 -DEEEAFPSPPHD-LDIYAPEPNGFELSQILDCLDCDGNPRHS---VESKHERKSQSSAG 306
Query: 305 QNPTRCNQQTTREVNVLSK---ENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKDN 364
+ P + T + NV+ + + +T+ +E V+P K S+ E R K S EQ +
Sbjct: 307 RRP-----KGTNDANVVGRYCNDQQTRREEADVRP-MKHSATDVVEPKRQTKQSREQMVS 366
Query: 365 HEKFQRKLEKPTIPKRN----QQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRT 424
QRK T KR QQD K D K E KRKLQESY Q ENAK+QRT
Sbjct: 367 --AIQRKPTAVTEQKRKLAGPQQDKLKALDP---DSKFEFAKRKLQESYHQHENAKRQRT 379
Query: 425 IQVMELHDLPKQ 430
IQV+E +PKQ
Sbjct: 427 IQVLE--TIPKQ 379
BLAST of Chy4G084030 vs. TAIR 10
Match:
AT3G10820.1 (Transcription elongation factor (TFIIS) family protein )
HSP 1 Score: 203.4 bits (516), Expect = 3.9e-52
Identity = 121/269 (44.98%), Postives = 158/269 (58.74%), Query Frame = 0
Query: 5 SGSLDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRLTRCLGCD 64
S SLD+WR YFR +SDIFGIID+AI+VAA+D PKEF+ R DRIAE LFSC+++RC+GCD
Sbjct: 7 SVSLDTWREYFRRGDSDIFGIIDHAIMVAAADWPKEFKSRSDRIAELLFSCKVSRCIGCD 66
Query: 65 RVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVSNFSF 124
+EL++AGD + A + GG +
Sbjct: 67 HLELSIAGD------------EAAVEIVGVGGGGDR------------------------ 126
Query: 125 GEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQATEI 184
G++ T E E+ S V EV+RI++IL+N +DE D VL ESLR+LE M++SVD L+ TEI
Sbjct: 127 GDSGVATGEGEEASVSVDEVMRIRDILSNKDDEKDSVLLESLRKLESMSMSVDILKDTEI 186
Query: 185 GKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAVKEED 244
GKAVN LR+H S +I LA+ L EWK +VD W+ + G E TP+S N S
Sbjct: 187 GKAVNGLRRHSSDKISKLAKTLFAEWKRLVDQWMNTPEEMAGTEGTPESLNLSVI----- 232
Query: 245 DYEEEGLPSPPLDEAAFFTTQPTSMELSQ 274
EEE PSPP D + +P ELSQ
Sbjct: 247 -DEEEAFPSPPHD-LDIYAPEPNGFELSQ 232
BLAST of Chy4G084030 vs. TAIR 10
Match:
AT5G09850.1 (Transcription elongation factor (TFIIS) family protein )
HSP 1 Score: 109.0 bits (271), Expect = 1.0e-23
Identity = 119/443 (26.86%), Postives = 187/443 (42.21%), Query Frame = 0
Query: 8 LDSWRNYFRNANSDIFGIIDYAILVAASDCPKEFRLRRDRIAEQLFSCRL-TRCLGCD-- 67
LD +R+ NA D++ ID AILVA+ D +E + RRD I E+L++ + +C CD
Sbjct: 3 LDDFRSVMDNAGVDVWTFIDTAILVASLDYGQELKRRRDNIVERLYATSMANKCRNCDFG 62
Query: 68 ----RVELAVAGDIDGDDGETGFKSDFARDGCEFEAGGSKESKVYSSRDDIGEMNCNRVS 127
E A+ +G E + D +E ++ +++ E + N
Sbjct: 63 GGGNVTEAAIGRVNNGRVHEETEEED-------------EEGVTAAAEEEVREKSVNVED 122
Query: 128 NFSFGEAEALTDEIEQESQIVGEVLRIKEILNNFEDESDPVLFESLRRLELMALSVDTLQ 187
+ F L D+ EQ+S ++ IKE L + D S+ L E L+ LE M ++ LQ
Sbjct: 123 DDDFDPFAGLFDD-EQKS-----IVEIKEKLED-PDLSEESLVELLQNLEDMDITFQALQ 182
Query: 188 ATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWVQATAAVQGAEVTPDSKNKSAAV 247
T+IG+ VN +RKH S +R LA+ L+ +WKE VD WV+ Q ++ P S +
Sbjct: 183 ETDIGRHVNRVRKHPSNNVRRLAKQLVKKWKETVDEWVKFN---QPGDLEPPS-----LI 242
Query: 248 KEEDDYEEEGLPSPPLDEAAFFTTQPTSMELSQFFDGMDDDGNPRNSGDFVKNRNNVRKT 307
+ED ++ L + + F P
Sbjct: 243 ADEDSPVQKALHNGSRQQVPDFGYSP---------------------------------- 302
Query: 308 SNGNQNPTRCNQQTTREVNVLSKENKTQMKEQVVKPNNKPSSNTNSELLRPQKLSSEQKD 367
V N SS+ NS + P++
Sbjct: 303 ---------------------------------VPQNGYSSSSKNSNITEPERKPRPVAP 339
Query: 368 NHEKFQRKLEKPTIPKRNQQDNFKCSDEVAVQVKLEATKRKLQESYQQAENAKKQRTIQV 427
+ KP+ P +QQ + D+ +V + +++LQ++Y+QAENAKKQRTIQV
Sbjct: 363 QPRRESPSPAKPSRPSPSQQTIPR--DKEHKEVDFDTARKRLQQNYRQAENAKKQRTIQV 339
Query: 428 MELHDLPKQGIGHRNPHLKSGGF 444
M++HD+PK K GGF
Sbjct: 423 MDIHDIPKP---------KKGGF 339
BLAST of Chy4G084030 vs. TAIR 10
Match:
AT3G48060.1 (BAH domain ;TFIIS helical bundle-like domain )
HSP 1 Score: 42.7 bits (99), Expect = 8.9e-04
Identity = 23/62 (37.10%), Postives = 35/62 (56.45%), Query Frame = 0
Query: 159 DPVLFESLRRLELMALSVDTLQATEIGKAVNCLRKHGSKRIRHLARVLIMEWKEMVDVWV 218
D L LR L+ + ++++ LQ IGK+VN LR H + I AR L+ WK+ V+ +
Sbjct: 354 DDFLLVLLRALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSLVDTWKKRVEAEM 413
Query: 219 QA 221
A
Sbjct: 414 DA 415
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FHK9 | 1.6e-90 | 49.57 | Probable mediator of RNA polymerase II transcription subunit 26b OS=Arabidopsis ... | [more] |
F4J4Y5 | 1.5e-64 | 42.36 | Probable mediator of RNA polymerase II transcription subunit 26a OS=Arabidopsis ... | [more] |
F4KFC7 | 1.4e-22 | 26.86 | Probable mediator of RNA polymerase II transcription subunit 26c OS=Arabidopsis ... | [more] |
Q8CB77 | 3.9e-04 | 32.29 | Elongin-A OS=Mus musculus OX=10090 GN=Eloa PE=1 SV=3 | [more] |
Q14241 | 5.1e-04 | 33.72 | Elongin-A OS=Homo sapiens OX=9606 GN=ELOA PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LBK9 | 5.6e-248 | 98.89 | TFIIS N-terminal domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G8... | [more] |
A0A5A7UDQ2 | 4.5e-245 | 98.01 | Putative mediator of RNA polymerase II transcription subunit 26b OS=Cucumis melo... | [more] |
A0A1S3B7K4 | 4.5e-245 | 98.01 | probable mediator of RNA polymerase II transcription subunit 26b OS=Cucumis melo... | [more] |
A0A6J1I7W1 | 1.2e-202 | 83.84 | probable mediator of RNA polymerase II transcription subunit 26b OS=Cucurbita ma... | [more] |
A0A6J1FCK1 | 1.2e-202 | 84.07 | probable mediator of RNA polymerase II transcription subunit 26b OS=Cucurbita mo... | [more] |
Match Name | E-value | Identity | Description | |
XP_004136624.1 | 0.0 | 98.89 | probable mediator of RNA polymerase II transcription subunit 26b [Cucumis sativu... | [more] |
XP_008443218.1 | 2.79e-312 | 98.01 | PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Cuc... | [more] |
XP_038904902.1 | 9.72e-297 | 94.48 | probable mediator of RNA polymerase II transcription subunit 26b isoform X1 [Ben... | [more] |
XP_038904903.1 | 2.88e-293 | 94.04 | probable mediator of RNA polymerase II transcription subunit 26b isoform X2 [Ben... | [more] |
XP_023539160.1 | 3.36e-259 | 84.73 | probable mediator of RNA polymerase II transcription subunit 26b [Cucurbita pepo... | [more] |
Match Name | E-value | Identity | Description | |
AT5G05140.1 | 1.1e-91 | 49.57 | Transcription elongation factor (TFIIS) family protein | [more] |
AT3G10820.2 | 1.1e-65 | 42.36 | Transcription elongation factor (TFIIS) family protein | [more] |
AT3G10820.1 | 3.9e-52 | 44.98 | Transcription elongation factor (TFIIS) family protein | [more] |
AT5G09850.1 | 1.0e-23 | 26.86 | Transcription elongation factor (TFIIS) family protein | [more] |
AT3G48060.1 | 8.9e-04 | 37.10 | BAH domain ;TFIIS helical bundle-like domain | [more] |