Chy4G082310 (gene) Cucumber (hystrix) v1

Overview
NameChy4G082310
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationchrH04: 21739007 .. 21744596 (-)
RNA-Seq ExpressionChy4G082310
SyntenyChy4G082310
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTTCTCTTCGATTCAATTACAATCAACTTCATCCATTCCCTTGTTCCTAATCGAAACCAGAAATTACCCCAAAGTTCGCTTCAACAAGATCAAAATAAAGCCCAGAACTCGAATCCCAATCTTCACAGTCTCATCTTCTTCAACATCCAAAGATATCTGGAGAAGAGAAACCCCACCTGAAAAATCAACCACAACCCTACTTCCCCAAAAGTACCAACGCAGTGGCAGAAGGCCAAGAGAGTCCTCCCATTTAGACCATAGCATCGACATGGACGAGCTTTTAGCTTCAATTGGGCAAACGAAGAACGAGCAAGAGCTGTACTCGGTTCTGTCGCCTTACAAGGGGCGGGAGCTTTCAATGCGGTTCATGGTGTCGCTTCTGTCGCGAGAATCGGATTGGCAAAGGTCGCTTGCCATTCTTGATTGGATTAACGAAGAGGCTCTTTACACTCCTTCGGTGTACGCTTACAATGTTGTTCTACGAAATGTGTTGCGCGCTAAACAGTGGGAGCTTGCGCATGGACTGTTTGACGAAATGCGCCAAAGAGCTCTGGCGGCTGATAGGTATACTTATTCTACTCTTATCACTTATTTTGGCAAAGAGGGTATGTTTGATGCTGCTCTTTCATGGCTACAAAAAATGGAGCAAGATCGTGTGTCTGGGGACCTTGTTTTGTATAGTAATTTGATTGAGTTATCTCGTAAACTCTGTGATTATTCAAAGGCTATTTCTATTTTTTCAAGATTGAAGAGATCTGGGATTACACCAGATATTGTGGCCTATAACACTATGATAAACGTGTTTGGAAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAAGAGATGAGGGCTGTGGGTGTTATGCCTGATACTGTTAGCTACTCGACTTTGCTTAATATGTTTGTTGAGAATGAAAAGTTTTTGGAGGCACTCTCTGTGATTTCTGAGATGAAAGAGGTCAATTGCCCGCTTGATCTTACAACGTGTAATATTATGATTGATGTTTATGGTCAGTTGGATATGGTGAAGGAAGCTGACAGGCTGTTTTGGAGAATGAGGAAGATGGGAATTGAACCCAATGTTGTGAGTTACAATACAATTTTGAGGGTTTATGGAGAGGCTGAGCTTTTCGGGGAAGCGATACACCTTTTCCGGTTGATGCAGAGGAAGGAGATTAAGCAGAATGTTGTGACATATAACACAATGATCAAGATATATGGGAAGACTTTGGAGCATGAAAAAGCAACAAATCTCGTACAAGATATGCAAAAAAGAGGGATTGAACCAAATGCTATTACGTACTCAACAATTATTTCGATATGGGGAAAAGCTGGAAAGTTGGATAGATCTGCAATGCTATTTCAAAAGCTAAGAAGCTCAAGGGCTGAGATTGATCAAGTTCTTTATCAGACTATGATTGTGGCCTACGAGAAGGCAGGCTTGGTTGGTCATGCCAAGCGTTTGCTTCACGAGCTAAAGCAACCAGACAATATTCCAAGGAAGACAGCAATTACCATTCTCGCTAAAGCTGGTCGAATCGAAGAAGCCACGTGGGTTTTTCGTCAGGCGTTTGATGCAGGAGAGTTAAAGGATATATCTGTTTTTGAGTGTATGATTGATCTGTTTTCAAGGAACAAGAAGCACAAAAATGTTTTGGAGGTACTTGAGAAGATGAGAAGTGTAGGACATTTCCCTAACTCTAATGTTATTGCTCTTGTCCTAAACGCTTACGGGAAGCTTAGGGATTTTGACACAGCTGATGCTCTATATATGGAGATGCAAGAGGAGGGCTGTATTTTTACAGATGAAGTGCACTTCCAAATGCTTAGTCTCTATGGCGCAAGAAATGATTACAAGAGATTGGAGTCGTTGTTCGAAAGGCTCGACTCCGATCCCAATATCAATAAGAAGGAATTGCATTTAGTCGTTGCTAGTATTTACGAAAGAGGTAATAGATCTAAGGATGCGTCTCGGATTATAAACAGGATGAACAAAATTGCAATTTCAAGATCATCATGACTTTGAATATAATTCTACCTTCCTGTACAGTAAAGTTTTACTAACAGATTCATCAATTATGGTTTACATACTTTGAACAATGTAATTTGTATATCGCCACACAAACTTGGTCAATAAGGCGATGTTGCTATTGCTGAACCACTTTTGTCAATGATATTTTTTGTTCTATCATGAAAATTAAACTCCTAGAGATTTATAGTTCAAGATTTTAACCAACTGGGTATATGCTCTCCTAGAAAGGGAAAAACAAGAAGAAAAAGAAATGTTTAATTCGGTTTGAGAAATATAAATGTATCCTAGTTAAATTACAAGACCGATCCTTGTAAATTTATATAATATACTCCTCCAACTTTAAATATGTAAGTTTGTGAATGCAGATCCATTTAAACATCCTATTATAGACAATTCAACATAATAGATGTGTTAACTTCTTAAAAAAGACGAGTACGATACAAAATTAAAAGTTCAAATTTAAAAGCTCATTTAGAGATAATTTGACACTTTTTTAAATTAGATTCGGTTAGAGGAAGACATTTCAATTTGATAAACAATGTTATATGTGAGATGACTTGTTAAGTCAGGAAATACCATTTCAAAGAAGAAAAAAAATTAGACCTTCTAAAAAATTGTGCGAAAAAATAGAATGAAGTAACCAAATATATTTGGTCATTAAAATTGATGTCTCATTCAATTTCACCCGTTTAATTAATTAAAGAAATAATTCATCCTACTTCATTATGATCAGCCTGTGTGGTTTCATTTGGTATAAAAAATGAATTTAAGACAAATTAATAAAAGATGGTTAGATGATCAGTTTGAAAGAGATTACTTTTAATTTAACATTAATTACACAGTTTAAATTTGTAGCACATGGGAAATATTTATTTTAGAACTGACCTATACTATATATTATTAGATCATATACAGCTACTTTCTTCCTTTTTCTTCAGTTTATTTTCCAATAAATTGTCTTTGAAACTTCTCATTCCTAAGCTAATTAATTGTTTCCCTCCAACCCCCACTGTAATCTTTTAAAACGAATTATTCACATTAATTTTCAACTTAATAACGTTAACCTATATATATATATATATATATATATATCCCCTCCTCACTTATTGAAAATGAAAATCATAATAAGCCGAAATCAAAATCAATTTTGAAAAGGAAAAAAACAATAATTAGAATGGCTCTTGTTATCTTGTAAAGAAACAATTAACAATTACATGACTTCTTCTTCCATTTTGAATTTGTCGTAGCAATGGCTTTGCTTGGCCCTGTGACTCACGCTCAGCTTTGTATTTCATTACAAATTATATTCAGTGCGATCACTATGGTTTAGTTATACGTAGCTGTTTCATGATAATTCTTGTATCATGTGTATTTGACGGTCTTGTAACAAAATCTGAGAGGTTTTGTTGGTTTATTATTCAATGGTTAATGTTACTGATTCTGACATTTTGATTGAAACAGGTTTCATTTCTTATTGGATTTGTAACCATTGTGGTTGCATGGGCTTACTCTGAATACTTAGCATTTAAAAAGAAGTCCATCTCGTCTCAACTGTAAGTTAATCAAAACAATATTTATTTATTCATAAACATGTACGTACCATACTGACTTGAAACTAAATTATTTTAGAAGGCACATTGATGTCGGATTGAGTGGGGAAGAAAGTCATAATGTAAAAGAAGATGACAAAGCTGTCTTATTGGAAGGAAATGTTATTAAGTCCACTCCTTCAGGAGCTCAATTTCATCAACCTTCTCAACTATTATCAGGTTAAGTTCATTCTTTCAGTAACAAAATCATATATTAATTTAATTCTTCCTTAGGTTTTACTGATGTTTTATGTTTTATCCTATTAGGTTCATTATGTTGGAAGAATCATTCTTGATAAAACATCGAATGCTACTCCGAGCTGCGTACGTAAACACACTGATCTTACTTTGAAATTTATGAAGAAAAACTTGCATGTATGCGCTCATCTTCTTGCTGCATGCTCACGTACTATCAGATGGTTGGTTATAGAAAGATTGTCGTACAAGTTAAGATGCATTCAAGTATTGCTCATTTTTTATTTTATTATTAATATAATATATAATTCTCTCTTTCTTATTTTACAAATCTGAATTTGGTCTTCTTTTAGCATACTTTTACATTTGTGATCGCACTGATATATTTGGAACATCAAAGAAGGTGTCTTATAGCCAACTAATCTTTTCTTCTACGATTTTTTTACTTTATTATTCATAAGAAAACCATGTAGATAAACATCATTCTTATTACATTTTATGTAGTAGTTACTGTTAAATAAATATCTTATAAATGAAATATTTTGCAGAGTTACAATAGAGATCTGTTCGTCTTCCTCCTCCTCCTTCTCATCATAGTTTCAACAGTAACTTCATTCAAGATTCATCTTTGTTAAGAAAAGGATTGATTTCTTGTTATTTTGTTTATGTCCAAGTTTGTTCCTATTTTTTAGGAATTAGTTATTTCAATATTTATGATTTGTAATCATGGAGAAAGTTTAGGGTCATGTTATTAGTGGATAGTTATTTTTAATATTTTTAATATTGTAATTTTTTTTTTGAATGAATGTATCTGCATTTTTGTGTCTTCAATTTAGTGCTGTAATCCTCATTTTAGAAAACAACAATCTTGATAAATCACCATTTTCAGTTAAACCCATTCTCTTCTTAAATATAATAGACATCAAACTAAGGAATGGAAAGGATGGATGTAGGTATTTAAATTAATTAACCACTCTTACTATTATAATTAATACTCTTCGTCAATTAATTCACACTTTTTTTCTTCTTTTATAGGTGATTTTCTTGATGTACCATTACTTTGGTGCAAGAGAAATTTACAACATGGGTCGTGTATGTGTCGCCTCATATATCTGGATGACGGGATTCGACAACTTTTCATATTACTATGCTCGAAAGACTTTAGCATTTCTAGATTTGCTCAGGTATATACATACGTTAATAATAATGTCTTCCTATCCCCTATTTATTATGTTAGGTTCGATAACCATTTGACACTAAATATATTTTTGCAGATGATGTGGCGATTAAATTTCTTGGTGGTTATGTGTTGCATTGTCCTTGACAACAGCTATATGCTATACTACATTTGCCCTTTACACACATTTTTTTCTCTTGTGGTATATGGTCTTGTTGCCGTTTTGAATAAGTACAATGGGAGTAAAGGAGTGATTGGTATTAAACTTTTTCTTTCCTTCTTGGTAATTATCATTGTTTGGGAAATTCTTGGAGTCTTTGAAGTCATTTGGGATCCATGTACCTTCCTTCTAGGTAACTCTTCTACCAATCTCAATCATACCATCAGTATTGCATCGAATCTCACTAGAACTTTGCAATTTAGACATGGTTGAGCAAGATTAGTAGTACTTGCATGACAAGTCCTCTTTGAAAAATTCTACATTTTTTAAACCTATTGTTGTTCGTTGTGTTTTGTAGGTTATAAAGATCCTAATCGGTTGAAAGAAAACTTGCCCCTTATGTATGAGTGGCATTTTCGAACGTGA

mRNA sequence

ATGGGCTTCTCTTCGATTCAATTACAATCAACTTCATCCATTCCCTTGTTCCTAATCGAAACCAGAAATTACCCCAAAGTTCGCTTCAACAAGATCAAAATAAAGCCCAGAACTCGAATCCCAATCTTCACAGTCTCATCTTCTTCAACATCCAAAGATATCTGGAGAAGAGAAACCCCACCTGAAAAATCAACCACAACCCTACTTCCCCAAAAGTACCAACGCAGTGGCAGAAGGCCAAGAGAGTCCTCCCATTTAGACCATAGCATCGACATGGACGAGCTTTTAGCTTCAATTGGGCAAACGAAGAACGAGCAAGAGCTGTACTCGGTTCTGTCGCCTTACAAGGGGCGGGAGCTTTCAATGCGGTTCATGGTGTCGCTTCTGTCGCGAGAATCGGATTGGCAAAGGTCGCTTGCCATTCTTGATTGGATTAACGAAGAGGCTCTTTACACTCCTTCGGTGTACGCTTACAATGTTGTTCTACGAAATGTGTTGCGCGCTAAACAGTGGGAGCTTGCGCATGGACTGTTTGACGAAATGCGCCAAAGAGCTCTGGCGGCTGATAGGTATACTTATTCTACTCTTATCACTTATTTTGGCAAAGAGGGTATGTTTGATGCTGCTCTTTCATGGCTACAAAAAATGGAGCAAGATCGTGTGTCTGGGGACCTTGTTTTGTATAGTAATTTGATTGAGTTATCTCGTAAACTCTGTGATTATTCAAAGGCTATTTCTATTTTTTCAAGATTGAAGAGATCTGGGATTACACCAGATATTGTGGCCTATAACACTATGATAAACGTGTTTGGAAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAAGAGATGAGGGCTGTGGGTGTTATGCCTGATACTGTTAGCTACTCGACTTTGCTTAATATGTTTGTTGAGAATGAAAAGTTTTTGGAGGCACTCTCTGTGATTTCTGAGATGAAAGAGGTCAATTGCCCGCTTGATCTTACAACGTGTAATATTATGATTGATGTTTATGGTCAGTTGGATATGGTGAAGGAAGCTGACAGGCTGTTTTGGAGAATGAGGAAGATGGGAATTGAACCCAATGTTGTGAGTTACAATACAATTTTGAGGGTTTATGGAGAGGCTGAGCTTTTCGGGGAAGCGATACACCTTTTCCGGTTGATGCAGAGGAAGGAGATTAAGCAGAATGTTGTGACATATAACACAATGATCAAGATATATGGGAAGACTTTGGAGCATGAAAAAGCAACAAATCTCGTACAAGATATGCAAAAAAGAGGGATTGAACCAAATGCTATTACGTACTCAACAATTATTTCGATATGGGGAAAAGCTGGAAAGTTGGATAGATCTGCAATGCTATTTCAAAAGCTAAGAAGCTCAAGGGCTGAGATTGATCAAGTTCTTTATCAGACTATGATTGTGGCCTACGAGAAGGCAGGCTTGGTTGGTCATGCCAAGCGTTTGCTTCACGAGCTAAAGCAACCAGACAATATTCCAAGGAAGACAGCAATTACCATTCTCGCTAAAGCTGGTCGAATCGAAGAAGCCACGTGGGTTTTTCGTCAGGCGTTTGATGCAGGAGAGTTAAAGGATATATCTGTTTTTGAGTGTATGATTGATCTGTTTTCAAGGAACAAGAAGCACAAAAATGTTTTGGAGGTACTTGAGAAGATGAGAAGTGTAGGACATTTCCCTAACTCTAATGTTATTGCTCTTGTCCTAAACGCTTACGGGAAGCTTAGGGATTTTGACACAGCTGATGCTCTATATATGGAGATGCAAGAGGAGGGCTGTATTTTTACAGATGAAGTGCACTTCCAAATGCTTAGTCTCTATGGCGCAAGAAATGATTACAAGAGATTGGAGTCGTTGTTCGAAAGGCTCGACTCCGATCCCAATATCAATAAGAAGGAATTGCATTTAGTCGTTGCTAGTATTTACGAAAGAGCAATGGCTTTGCTTGGCCCTGTGACTCACGCTCAGCTTTGTATTTCATTACAAATTATATTCAGTGCGATCACTATGGTTTCATTTCTTATTGGATTTGTAACCATTGTGGTTGCATGGGCTTACTCTGAATACTTAGCATTTAAAAAGAAGTCCATCTCGTCTCAACTGCACATTGATGTCGGATTGAGTGGGGAAGAAAGTCATAATGTAAAAGAAGATGACAAAGCTGTCTTATTGGAAGGAAATGTTATTAAGTCCACTCCTTCAGGAGCTCAATTTCATCAACCTTCTCAACTATTATCAGGTGATTTTCTTGATGTACCATTACTTTGGTGCAAGAGAAATTTACAACATGGGTCGTGTATGTGTCGCCTCATATATCTGGATGACGGGATTCGACAACTTTTCATATTACTATGCTCGAAAGACTTTAGCATTTCTAGATTTGCTCAGATGATGTGGCGATTAAATTTCTTGGTGGTTATGTGTTGCATTGTCCTTGACAACAGCTATATGCTATACTACATTTGCCCTTTACACACATTTTTTTCTCTTGTGGTATATGGTCTTGTTGCCGTTTTGAATAAGTACAATGGGAGTAAAGGAGTGATTGGTTATAAAGATCCTAATCGGTTGAAAGAAAACTTGCCCCTTATGTATGAGTGGCATTTTCGAACGTGA

Coding sequence (CDS)

ATGGGCTTCTCTTCGATTCAATTACAATCAACTTCATCCATTCCCTTGTTCCTAATCGAAACCAGAAATTACCCCAAAGTTCGCTTCAACAAGATCAAAATAAAGCCCAGAACTCGAATCCCAATCTTCACAGTCTCATCTTCTTCAACATCCAAAGATATCTGGAGAAGAGAAACCCCACCTGAAAAATCAACCACAACCCTACTTCCCCAAAAGTACCAACGCAGTGGCAGAAGGCCAAGAGAGTCCTCCCATTTAGACCATAGCATCGACATGGACGAGCTTTTAGCTTCAATTGGGCAAACGAAGAACGAGCAAGAGCTGTACTCGGTTCTGTCGCCTTACAAGGGGCGGGAGCTTTCAATGCGGTTCATGGTGTCGCTTCTGTCGCGAGAATCGGATTGGCAAAGGTCGCTTGCCATTCTTGATTGGATTAACGAAGAGGCTCTTTACACTCCTTCGGTGTACGCTTACAATGTTGTTCTACGAAATGTGTTGCGCGCTAAACAGTGGGAGCTTGCGCATGGACTGTTTGACGAAATGCGCCAAAGAGCTCTGGCGGCTGATAGGTATACTTATTCTACTCTTATCACTTATTTTGGCAAAGAGGGTATGTTTGATGCTGCTCTTTCATGGCTACAAAAAATGGAGCAAGATCGTGTGTCTGGGGACCTTGTTTTGTATAGTAATTTGATTGAGTTATCTCGTAAACTCTGTGATTATTCAAAGGCTATTTCTATTTTTTCAAGATTGAAGAGATCTGGGATTACACCAGATATTGTGGCCTATAACACTATGATAAACGTGTTTGGAAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAAGAGATGAGGGCTGTGGGTGTTATGCCTGATACTGTTAGCTACTCGACTTTGCTTAATATGTTTGTTGAGAATGAAAAGTTTTTGGAGGCACTCTCTGTGATTTCTGAGATGAAAGAGGTCAATTGCCCGCTTGATCTTACAACGTGTAATATTATGATTGATGTTTATGGTCAGTTGGATATGGTGAAGGAAGCTGACAGGCTGTTTTGGAGAATGAGGAAGATGGGAATTGAACCCAATGTTGTGAGTTACAATACAATTTTGAGGGTTTATGGAGAGGCTGAGCTTTTCGGGGAAGCGATACACCTTTTCCGGTTGATGCAGAGGAAGGAGATTAAGCAGAATGTTGTGACATATAACACAATGATCAAGATATATGGGAAGACTTTGGAGCATGAAAAAGCAACAAATCTCGTACAAGATATGCAAAAAAGAGGGATTGAACCAAATGCTATTACGTACTCAACAATTATTTCGATATGGGGAAAAGCTGGAAAGTTGGATAGATCTGCAATGCTATTTCAAAAGCTAAGAAGCTCAAGGGCTGAGATTGATCAAGTTCTTTATCAGACTATGATTGTGGCCTACGAGAAGGCAGGCTTGGTTGGTCATGCCAAGCGTTTGCTTCACGAGCTAAAGCAACCAGACAATATTCCAAGGAAGACAGCAATTACCATTCTCGCTAAAGCTGGTCGAATCGAAGAAGCCACGTGGGTTTTTCGTCAGGCGTTTGATGCAGGAGAGTTAAAGGATATATCTGTTTTTGAGTGTATGATTGATCTGTTTTCAAGGAACAAGAAGCACAAAAATGTTTTGGAGGTACTTGAGAAGATGAGAAGTGTAGGACATTTCCCTAACTCTAATGTTATTGCTCTTGTCCTAAACGCTTACGGGAAGCTTAGGGATTTTGACACAGCTGATGCTCTATATATGGAGATGCAAGAGGAGGGCTGTATTTTTACAGATGAAGTGCACTTCCAAATGCTTAGTCTCTATGGCGCAAGAAATGATTACAAGAGATTGGAGTCGTTGTTCGAAAGGCTCGACTCCGATCCCAATATCAATAAGAAGGAATTGCATTTAGTCGTTGCTAGTATTTACGAAAGAGCAATGGCTTTGCTTGGCCCTGTGACTCACGCTCAGCTTTGTATTTCATTACAAATTATATTCAGTGCGATCACTATGGTTTCATTTCTTATTGGATTTGTAACCATTGTGGTTGCATGGGCTTACTCTGAATACTTAGCATTTAAAAAGAAGTCCATCTCGTCTCAACTGCACATTGATGTCGGATTGAGTGGGGAAGAAAGTCATAATGTAAAAGAAGATGACAAAGCTGTCTTATTGGAAGGAAATGTTATTAAGTCCACTCCTTCAGGAGCTCAATTTCATCAACCTTCTCAACTATTATCAGGTGATTTTCTTGATGTACCATTACTTTGGTGCAAGAGAAATTTACAACATGGGTCGTGTATGTGTCGCCTCATATATCTGGATGACGGGATTCGACAACTTTTCATATTACTATGCTCGAAAGACTTTAGCATTTCTAGATTTGCTCAGATGATGTGGCGATTAAATTTCTTGGTGGTTATGTGTTGCATTGTCCTTGACAACAGCTATATGCTATACTACATTTGCCCTTTACACACATTTTTTTCTCTTGTGGTATATGGTCTTGTTGCCGTTTTGAATAAGTACAATGGGAGTAAAGGAGTGATTGGTTATAAAGATCCTAATCGGTTGAAAGAAAACTTGCCCCTTATGTATGAGTGGCATTTTCGAACGTGA

Protein sequence

MGFSSIQLQSTSSIPLFLIETRNYPKVRFNKIKIKPRTRIPIFTVSSSSTSKDIWRRETPPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYMEMQEEGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERAMALLGPVTHAQLCISLQIIFSAITMVSFLIGFVTIVVAWAYSEYLAFKKKSISSQLHIDVGLSGEESHNVKEDDKAVLLEGNVIKSTPSGAQFHQPSQLLSGDFLDVPLLWCKRNLQHGSCMCRLIYLDDGIRQLFILLCSKDFSISRFAQMMWRLNFLVVMCCIVLDNSYMLYYICPLHTFFSLVVYGLVAVLNKYNGSKGVIGYKDPNRLKENLPLMYEWHFRT*
Homology
[Close]
BLAST of Chy4G082310 vs. ExPASy Swiss-Prot
Match: Q9FLD8 (Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g39980 PE=2 SV=1)

HSP 1 Score: 986.1 bits (2548), Expect = 2.6e-286
Identity = 501/657 (76.26%), Postives = 583/657 (88.74%), Query Frame = 0 

Query: 6   IQLQSTSSIPLFLIETRN---YPKVRFNKIKIKPRTRIPIFTVSSSSTS-----KDIWRR 65
           I++ S+SS+ L L+       Y  + F+ I  + R R  IFTVS+SS+S     K +WR+
Sbjct: 3   IEIASSSSLSLPLLPLTRPHIYTSIPFSTIP-EARQRNLIFTVSASSSSESTQNKKVWRK 62

Query: 66  ETPPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKG 125
           +  PEK+TT+    +  R  RR + S+ LDH++DMDELLASI QT+NE+EL+S+LS YK 
Sbjct: 63  Q--PEKNTTSSF--QALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKD 122

Query: 126 RELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGL 185
           R+LS+RFMVSLLSRE+DWQRSLA+LDW++EEA YTPSV+AYNVVLRNVLRAKQ+++AHGL
Sbjct: 123 RQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGL 182

Query: 186 FDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRK 245
           FDEMRQRALA DRYTYSTLIT FGKEGMFD+ALSWLQKMEQDRVSGDLVLYSNLIELSR+
Sbjct: 183 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 242

Query: 246 LCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTVS 305
           LCDYSKAISIFSRLKRSGITPD+VAYN+MINV+GKAKLFREAR L+KEM   GV+P+TVS
Sbjct: 243 LCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVS 302

Query: 306 YSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMR 365
           YSTLL+++VEN KFLEALSV +EMKEVNC LDLTTCNIMIDVYGQLDMVKEADRLFW +R
Sbjct: 303 YSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 362

Query: 366 KMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHE 425
           KM IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK+I+QNVVTYNTMIKIYGKT+EHE
Sbjct: 363 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 422

Query: 426 KATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTMI 485
           KATNLVQ+MQ RGIEPNAITYSTIISIWGKAGKLDR+A LFQKLRSS  EIDQVLYQTMI
Sbjct: 423 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 482

Query: 486 VAYEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDIS 545
           VAYE+ GL+GHAKRLLHELK PDNIPR+TAITILAKAGR EEATWVFRQAF++GE+KDIS
Sbjct: 483 VAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDIS 542

Query: 546 VFECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYMEM 605
           VF CMI+L+SRN+++ NV+EV EKMR+ G+FP+SNVIA+VLNAYGK R+F+ AD +Y EM
Sbjct: 543 VFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 602

Query: 606 QEEGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERA 655
           QEEGC+F DEVHFQMLSLY ++ D++ +ESLF+RL+SDPN+N KELHLVVA++YERA
Sbjct: 603 QEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERA 654

[Close]
BLAST of Chy4G082310 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 202.6 bits (514), Expect = 1.8e-50
Identity = 129/436 (29.59%), Postives = 230/436 (52.75%), Query Frame = 0 

Query: 151 YTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 210
           Y P+   +N ++  +    +   A  L D M  R    D +TY T++    K G  D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 211 SWLQKMEQDRVSGDLVLYSNLIELSRKLCDY---SKAISIFSRLKRSGITPDIVAYNTMI 270
           S L+KME+ ++  D+V+Y+ +I+    LC+Y   + A+++F+ +   GI P++V YN++I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIID---ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 300

Query: 271 NVFGKAKLFREARFLLKEMRAVGVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCP 330
                   + +A  LL +M    + P+ V++S L++ FV+  K +EA  +  EM + +  
Sbjct: 301 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 331 LDLTTCNIMIDVYGQLDMVKEADRLFWRMRKMGIEPNVVSYNTILRVYGEAELFGEAIHL 390
            D+ T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 420

Query: 391 FRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGK 450
           FR M ++ +  N VTYNT+I+   +  + + A  + + M   G+ P+ ITYS ++    K
Sbjct: 421 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 480

Query: 451 AGKLDRSAMLFQKLRSSRAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELK----QPDNIP 510
            GKL+++ ++F+ L+ S+ E D   Y  MI    KAG V     L   L     +P+ I 
Sbjct: 481 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 540

Query: 511 RKTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVLEKMR 570
             T I+   + G  EEA  +FR+  + G L +   +  +I    R+       E++++MR
Sbjct: 541 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 600

Query: 571 SVGHFPNSNVIALVLN 580
           S G   +++ I++V+N
Sbjct: 601 SCGFVGDASTISMVIN 613

[Close]
BLAST of Chy4G082310 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-50
Identity = 129/571 (22.59%), Postives = 270/571 (47.29%), Query Frame = 0 

Query: 88  HSIDMDELLASIGQTKNEQELYSVLSPYKGRELSMR---FMVSLLSRESDWQRSLAILDW 147
           +S D++ L+  +        +   L  +K + LS+     +    +   DWQRSL +  +
Sbjct: 72  YSYDVESLINKLSSLPPRGSIARCLDIFKNK-LSLNDFALVFKEFAGRGDWQRSLRLFKY 131

Query: 148 INEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEG 207
           +  +    P+ + Y +++  + R    +    +FDEM  + ++   ++Y+ LI  +G+ G
Sbjct: 132 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 191

Query: 208 MFDAALSWLQKMEQDRVSGDLVLYSNLIE-LSRKLCDYSKAISIFSRLKRSGITPDIVAY 267
            ++ +L  L +M+ +++S  ++ Y+ +I   +R   D+   + +F+ ++  GI PDIV Y
Sbjct: 192 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 251

Query: 268 NTMINVFGKAKLFREARFLLKEMRAVGVMPDTVSYSTLLNMFVENEKFLEALSVISEMKE 327
           NT+++      L  EA  + + M   G++PD  +YS L+  F +  +  +   ++ EM  
Sbjct: 252 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 311

Query: 328 VNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKMGIEPNVVSYNTILRVYGEAELFGE 387
                D+T+ N++++ Y +   +KEA  +F +M+  G  PN  +Y+ +L ++G++  + +
Sbjct: 312 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 371

Query: 388 AIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIIS 447
              LF  M+      +  TYN +I+++G+    ++   L  DM +  IEP+  TY  II 
Sbjct: 372 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 431

Query: 448 IWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTMIVAYEKAGLVGHAK---RLLHELKQPD 507
             GK G  + +  + Q + ++        Y  +I A+ +A L   A      +HE+    
Sbjct: 432 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 491

Query: 508 NIPR-KTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVL 567
           +I    + +   A+ G ++E+  +  +  D+G  ++   F   I+ + +  K +  ++  
Sbjct: 492 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 551

Query: 568 EKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYMEMQEEGCIFTDEVHFQMLSLYGAR 627
             M      P+   +  VL+ Y   R  D     + EM+    + +   +  ML++YG  
Sbjct: 552 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 611

Query: 628 NDYKRLESLFERLDSDPNINKKELHLVVASI 651
             +  +  L E + S+   N   +H V+  +
Sbjct: 612 ERWDDVNELLEEMLSNRVSN---IHQVIGQM 638

[Close]
BLAST of Chy4G082310 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 5.0e-48
Identity = 115/437 (26.32%), Postives = 217/437 (49.66%), Query Frame = 0 

Query: 169 KQWELAHGLFD-EMRQRALAA--DRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDL 228
           K+++LA   FD  M+Q+   +  D    + +I+  GKEG   +A +    +++D  S D+
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 208

Query: 229 VLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGK-AKLFREARFLLK 288
             Y++LI        Y +A+++F +++  G  P ++ YN ++NVFGK    + +   L++
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268

Query: 289 EMRAVGVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLD 348
           +M++ G+ PD  +Y+TL+          EA  V  EMK      D  T N ++DVYG+  
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328

Query: 349 MVKEADRLFWRMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYN 408
             KEA ++   M   G  P++V+YN+++  Y    +  EA+ L   M  K  K +V TY 
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388

Query: 409 TMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSS 468
           T++  + +  + E A ++ ++M+  G +PN  T++  I ++G  GK      +F ++   
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448

Query: 469 RAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRK----TAITILAKAGRIEEA 528
               D V + T++  + + G+      +  E+K+   +P +    T I+  ++ G  E+A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 529 TWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNA 588
             V+R+  DAG   D+S +  ++   +R    +   +VL +M      PN      +L+A
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 589 YGKLRDFDTADALYMEM 598
           Y   ++     +L  E+
Sbjct: 569 YANGKEIGLMHSLAEEV 585

[Close]
BLAST of Chy4G082310 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.5e-47
Identity = 125/446 (28.03%), Postives = 228/446 (51.12%), Query Frame = 0 

Query: 138 SLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLI 197
           ++A++D + E   Y P  + +  ++  +    +   A  L D+M QR    D  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 231

Query: 198 TYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIT 257
               K G  D ALS L+KME+ ++  D+V+Y+ +I+   K      A+++F+ +   GI 
Sbjct: 232 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 291

Query: 258 PDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTVSYSTLLNMFVENEKFLEALSV 317
           PD+  Y+++I+       + +A  LL +M    + P+ V++S L++ FV+  K +EA  +
Sbjct: 292 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 351

Query: 318 ISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKMGIEPNVVSYNTILRVYGE 377
             EM + +   D+ T + +I+ +   D + EA  +F  M      PNVV+Y+T+++ + +
Sbjct: 352 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 411

Query: 378 AELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAIT 437
           A+   E + LFR M ++ +  N VTY T+I  + +  + + A  + + M   G+ PN +T
Sbjct: 412 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 471

Query: 438 YSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELK 497
           Y+ ++    K GKL ++ ++F+ L+ S  E D   Y  MI    KAG V     L   L 
Sbjct: 472 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 531

Query: 498 ----QPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHK 557
                P+ I   T I+   + G  EEA  + ++  + G L +   +  +I    R+   +
Sbjct: 532 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 591

Query: 558 NVLEVLEKMRSVGHFPNSNVIALVLN 580
              E++++MRS G   +++ I LV N
Sbjct: 592 ASAELIKEMRSCGFAGDASTIGLVTN 616

[Close]
BLAST of Chy4G082310 vs. ExPASy TrEMBL
Match: A0A0A0LCU4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G827400 PE=4 SV=1)

HSP 1 Score: 1256.5 bits (3250), Expect = 0.0e+00
Identity = 642/657 (97.72%), Postives = 647/657 (98.48%), Query Frame = 0 

Query: 1   MGFSSIQLQST----SSIPLFLIETRNYPKVRFNKIKIKPRTRIPIFTVSSSSTSKDIWR 60
           MGFSSIQLQST    SSIPLFLIETRNYPKVRFNKIKIKPRTRIPIFT SSSSTSKDIWR
Sbjct: 1   MGFSSIQLQSTSSLSSSIPLFLIETRNYPKVRFNKIKIKPRTRIPIFTASSSSTSKDIWR 60

Query: 61  RETPPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120
           R+TP EKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK
Sbjct: 61  RQTPSEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120

Query: 121 GRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180
           GRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG
Sbjct: 121 GRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180

Query: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240
           LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240

Query: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTV 300
           KLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAV VMPDTV
Sbjct: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTV 300

Query: 301 SYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360
           SYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM
Sbjct: 301 SYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360

Query: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEH 420
           RK+GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEH
Sbjct: 361 RKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEH 420

Query: 421 EKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTM 480
           EKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSS AEIDQVLYQTM
Sbjct: 421 EKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTM 480

Query: 481 IVAYEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540
           IVAYEKAGLVGHAKRLLHELKQPDNIPR TAITILAKAGRIEEATWVFRQAFDAGELKDI
Sbjct: 481 IVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDI 540

Query: 541 SVFECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYME 600
           SVFECMIDLFSRNKKHKNVLEV EKMR+VGHFPNS+VIALVLNAYGKLRDFDTADALYME
Sbjct: 541 SVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYME 600

Query: 601 MQEEGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYER 654
           MQEEGC+FTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYER
Sbjct: 601 MQEEGCVFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYER 657

[Close]
BLAST of Chy4G082310 vs. ExPASy TrEMBL
Match: A0A5A7UGV7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008300 PE=4 SV=1)

HSP 1 Score: 1221.1 bits (3158), Expect = 0.0e+00
Identity = 624/661 (94.40%), Postives = 637/661 (96.37%), Query Frame = 0 

Query: 1   MGFSSIQLQST----SSIPLFLIETRNYPKVRFNKIKIKPRTRIPIFTVSSSSTSKDIWR 60
           MGFSSIQLQST    S IPLFLIETR+YPK+RFNKIK KPRTRIPIF  SSSS SKDIWR
Sbjct: 1   MGFSSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWR 60

Query: 61  RETPPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120
           R+TP EKSTTTLLPQKYQRS RR RESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK
Sbjct: 61  RKTPSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120

Query: 121 GRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180
           GR+LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG
Sbjct: 121 GRQLSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180

Query: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240
           LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240

Query: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTV 300
           KLCDYSKAISIFSRLKRSGITPDIVAYN+MINVFGKAKLFREARFLLKEMRAV VMPDTV
Sbjct: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTV 300

Query: 301 SYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360
           SYSTLLNMFVENEKFLEALSV SEM EVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM
Sbjct: 301 SYSTLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360

Query: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEH 420
           RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEI+QNVVTYNTMIKIYGK+LEH
Sbjct: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 420

Query: 421 EKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTM 480
           EKATNLVQ+MQ RGIEPNAITYSTIISIWGKAGKL+R+AMLFQKLRSSRAEIDQVLYQTM
Sbjct: 421 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTM 480

Query: 481 IVAYEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540
           IVAYEKAGLV HAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI
Sbjct: 481 IVAYEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540

Query: 541 SVFECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYME 600
           SVF CMIDLFSRNKKHKNV+EV EKMRSVGHFPNSNVIALVLNAYGKLRDFDTADA+YME
Sbjct: 541 SVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYME 600

Query: 601 MQEEGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERAMA 658
           MQE+GCIF DEVHFQMLSLYGAR DYKRLESLFERLDSDPNINKKELHLVVASIYER   
Sbjct: 601 MQEKGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNR 660

[Close]
BLAST of Chy4G082310 vs. ExPASy TrEMBL
Match: A0A1S3B8T9 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487030 PE=4 SV=1)

HSP 1 Score: 1221.1 bits (3158), Expect = 0.0e+00
Identity = 624/661 (94.40%), Postives = 637/661 (96.37%), Query Frame = 0 

Query: 1   MGFSSIQLQST----SSIPLFLIETRNYPKVRFNKIKIKPRTRIPIFTVSSSSTSKDIWR 60
           MGFSSIQLQST    S IPLFLIETR+YPK+RFNKIK KPRTRIPIF  SSSS SKDIWR
Sbjct: 1   MGFSSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWR 60

Query: 61  RETPPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120
           R+TP EKSTTTLLPQKYQRS RR RESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK
Sbjct: 61  RKTPSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120

Query: 121 GRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180
           GR+LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG
Sbjct: 121 GRQLSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180

Query: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240
           LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240

Query: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTV 300
           KLCDYSKAISIFSRLKRSGITPDIVAYN+MINVFGKAKLFREARFLLKEMRAV VMPDTV
Sbjct: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTV 300

Query: 301 SYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360
           SYSTLLNMFVENEKFLEALSV SEM EVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM
Sbjct: 301 SYSTLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360

Query: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEH 420
           RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEI+QNVVTYNTMIKIYGK+LEH
Sbjct: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 420

Query: 421 EKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTM 480
           EKATNLVQ+MQ RGIEPNAITYSTIISIWGKAGKL+R+AMLFQKLRSSRAEIDQVLYQTM
Sbjct: 421 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTM 480

Query: 481 IVAYEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540
           IVAYEKAGLV HAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI
Sbjct: 481 IVAYEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540

Query: 541 SVFECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYME 600
           SVF CMIDLFSRNKKHKNV+EV EKMRSVGHFPNSNVIALVLNAYGKLRDFDTADA+YME
Sbjct: 541 SVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYME 600

Query: 601 MQEEGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERAMA 658
           MQE+GCIF DEVHFQMLSLYGAR DYKRLESLFERLDSDPNINKKELHLVVASIYER   
Sbjct: 601 MQEKGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNR 660

[Close]
BLAST of Chy4G082310 vs. ExPASy TrEMBL
Match: A0A6J1F2M9 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441589 PE=4 SV=1)

HSP 1 Score: 1153.7 bits (2983), Expect = 0.0e+00
Identity = 591/658 (89.82%), Postives = 620/658 (94.22%), Query Frame = 0 

Query: 4   SSIQLQSTSSI--PLF--LIETRNYPKVRFNKIKIKPRTRIPIFTVSSSSTSKDIWRRET 63
           SS+QLQSTSS   P+F  LIETRN  KV  ++ K KPR RI I   SSSSTSKDIWRR+T
Sbjct: 9   SSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68

Query: 64  PPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRE 123
             EKSTTT  PQKY+RS RR RESSHLDHS+DMDELLASIGQTKNEQELYS+LSPYKGR+
Sbjct: 69  SSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128

Query: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183
           LSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHGLFD
Sbjct: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188

Query: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 243
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKM+QDRVSGDLVLYSNLIELSRKLC
Sbjct: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMDQDRVSGDLVLYSNLIELSRKLC 248

Query: 244 DYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTVSYS 303
           DYSKAISIFSRLKRSGITPDIVAYN+MINVFGKAKLFREARFLLKEMRAV V+PDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308

Query: 304 TLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKM 363
           TLL+MFVENEKFLEALSV SEM EVNCPL+LTTCNIMIDVYGQLDMVKEADRLFW MRKM
Sbjct: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKA 423
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEI+QNVVTYNTMIKIYGK+LEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 424 TNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTMIVA 483
           TNL+Q+MQ RGIEPNAITYSTIISIWGKAGKLDR+AMLFQKLRSS AEIDQVLYQTMIVA
Sbjct: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 484 YEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543
           YE+AGLV HAKRL+ ELKQPDNIPRKTAITILA+AGR+EEATWVFRQAFDAGELKDISVF
Sbjct: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 548

Query: 544 ECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYMEMQE 603
            CMIDLFSRNKKHKNV+EV EKMRSVGHFP+SNVIALVLNAYGKLRDFD ADA+YMEMQE
Sbjct: 549 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 604 EGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERAMAL 658
           EGC+F DEVHFQMLSLYGAR DYKRLE LFERLDSDPNINKKELHLVVASIYERA  L
Sbjct: 609 EGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERANRL 666

[Close]
BLAST of Chy4G082310 vs. ExPASy TrEMBL
Match: A0A6J1J8J4 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482255 PE=4 SV=1)

HSP 1 Score: 1152.5 bits (2980), Expect = 0.0e+00
Identity = 589/658 (89.51%), Postives = 619/658 (94.07%), Query Frame = 0 

Query: 4   SSIQLQSTSSI--PLFLI--ETRNYPKVRFNKIKIKPRTRIPIFTVSSSSTSKDIWRRET 63
           SS+QLQSTSS   P+FL   ETRN  KV  ++ K KPR RI I   SSSSTSKDIWRR+T
Sbjct: 9   SSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68

Query: 64  PPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRE 123
           P EKSTTT  PQKY+RS RR RESSHLDHS+DMDELLASIGQTKNEQELYS+LSPYKGR+
Sbjct: 69  PSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128

Query: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183
           LSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHGLFD
Sbjct: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188

Query: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 243
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC
Sbjct: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 248

Query: 244 DYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTVSYS 303
           DYSKAISIFSRLKRSGITPDIVAYN+MINVFGKAKLFREARFLLKEMRAV V+PDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308

Query: 304 TLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKM 363
           TLL+MFVENEKFLEALSV SEM EVNCPL+LTTCNIMIDVYGQLDMVKEADRLFW MRKM
Sbjct: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKA 423
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEI+QNVVTYNTMIKIYGK+LEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 424 TNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTMIVA 483
           TNL+Q+MQ RGIEPNAITYSTIISIWGKAGKLDR+AMLFQKLRSS AEIDQVLYQTMIVA
Sbjct: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 484 YEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543
           YE+AGLV HAKRL+ ELKQPDNIPRKTAITILA+AGR+EEATWVFRQAFDAGELKDISVF
Sbjct: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 548

Query: 544 ECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYMEMQE 603
            CMIDLFSRNK+HKNV+EV EKMRSVGHFP+SNVIALVLNAYGKLRDFD ADA+YMEMQE
Sbjct: 549 GCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 604 EGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERAMAL 658
           +GC+F DEVHFQMLSLYGAR DYKRLE LFERLDSDPNINKKELHLVVA IYERA  L
Sbjct: 609 QGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERANRL 666

[Close]
BLAST of Chy4G082310 vs. NCBI nr
Match: XP_004147489.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucumis sativus] >KGN59598.1 hypothetical protein Csa_000862 [Cucumis sativus])

HSP 1 Score: 1262 bits (3265), Expect = 0.0
Identity = 642/657 (97.72%), Postives = 647/657 (98.48%), Query Frame = 0 

Query: 1   MGFSSIQLQSTSS----IPLFLIETRNYPKVRFNKIKIKPRTRIPIFTVSSSSTSKDIWR 60
           MGFSSIQLQSTSS    IPLFLIETRNYPKVRFNKIKIKPRTRIPIFT SSSSTSKDIWR
Sbjct: 1   MGFSSIQLQSTSSLSSSIPLFLIETRNYPKVRFNKIKIKPRTRIPIFTASSSSTSKDIWR 60

Query: 61  RETPPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120
           R+TP EKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK
Sbjct: 61  RQTPSEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120

Query: 121 GRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180
           GRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG
Sbjct: 121 GRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180

Query: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240
           LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240

Query: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTV 300
           KLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAV VMPDTV
Sbjct: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVDVMPDTV 300

Query: 301 SYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360
           SYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM
Sbjct: 301 SYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360

Query: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEH 420
           RK+GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEH
Sbjct: 361 RKIGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEH 420

Query: 421 EKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTM 480
           EKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSS AEIDQVLYQTM
Sbjct: 421 EKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSGAEIDQVLYQTM 480

Query: 481 IVAYEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540
           IVAYEKAGLVGHAKRLLHELKQPDNIPR TAITILAKAGRIEEATWVFRQAFDAGELKDI
Sbjct: 481 IVAYEKAGLVGHAKRLLHELKQPDNIPRTTAITILAKAGRIEEATWVFRQAFDAGELKDI 540

Query: 541 SVFECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYME 600
           SVFECMIDLFSRNKKHKNVLEV EKMR+VGHFPNS+VIALVLNAYGKLRDFDTADALYME
Sbjct: 541 SVFECMIDLFSRNKKHKNVLEVFEKMRNVGHFPNSDVIALVLNAYGKLRDFDTADALYME 600

Query: 601 MQEEGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYER 653
           MQEEGC+FTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYER
Sbjct: 601 MQEEGCVFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYER 657

[Close]
BLAST of Chy4G082310 vs. NCBI nr
Match: XP_008443439.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucumis melo] >KAA0053737.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK25666.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1226 bits (3173), Expect = 0.0
Identity = 623/657 (94.82%), Postives = 636/657 (96.80%), Query Frame = 0 

Query: 1   MGFSSIQLQST----SSIPLFLIETRNYPKVRFNKIKIKPRTRIPIFTVSSSSTSKDIWR 60
           MGFSSIQLQST    S IPLFLIETR+YPK+RFNKIK KPRTRIPIF  SSSS SKDIWR
Sbjct: 1   MGFSSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWR 60

Query: 61  RETPPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120
           R+TP EKSTTTLLPQKYQRS RR RESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK
Sbjct: 61  RKTPSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120

Query: 121 GRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180
           GR+LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG
Sbjct: 121 GRQLSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180

Query: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240
           LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240

Query: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTV 300
           KLCDYSKAISIFSRLKRSGITPDIVAYN+MINVFGKAKLFREARFLLKEMRAV VMPDTV
Sbjct: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTV 300

Query: 301 SYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360
           SYSTLLNMFVENEKFLEALSV SEM EVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM
Sbjct: 301 SYSTLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360

Query: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEH 420
           RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEI+QNVVTYNTMIKIYGK+LEH
Sbjct: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEH 420

Query: 421 EKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTM 480
           EKATNLVQ+MQ RGIEPNAITYSTIISIWGKAGKL+R+AMLFQKLRSSRAEIDQVLYQTM
Sbjct: 421 EKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTM 480

Query: 481 IVAYEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540
           IVAYEKAGLV HAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI
Sbjct: 481 IVAYEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540

Query: 541 SVFECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYME 600
           SVF CMIDLFSRNKKHKNV+EV EKMRSVGHFPNSNVIALVLNAYGKLRDFDTADA+YME
Sbjct: 541 SVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYME 600

Query: 601 MQEEGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYER 653
           MQE+GCIF DEVHFQMLSLYGAR DYKRLESLFERLDSDPNINKKELHLVVASIYER
Sbjct: 601 MQEKGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYER 657

[Close]
BLAST of Chy4G082310 vs. NCBI nr
Match: XP_038903074.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Benincasa hispida])

HSP 1 Score: 1178 bits (3048), Expect = 0.0
Identity = 599/657 (91.17%), Postives = 621/657 (94.52%), Query Frame = 0 

Query: 1   MGFSSIQLQSTSS----IPLFLIETRNYPKVRFNKIKIKPRTRIPIFTVSSSSTSKDIWR 60
           MGFSSIQLQSTSS    I  FLIET NYPK+RFN IK KPRTRIPI   SSSST KDIWR
Sbjct: 1   MGFSSIQLQSTSSFSSPILSFLIETGNYPKIRFNNIKPKPRTRIPILRASSSSTFKDIWR 60

Query: 61  RETPPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYK 120
           R+ P EKSTTT  P KYQRS RR RESSHLDHS+DMDELLASIG+TKNEQELYSVLSPYK
Sbjct: 61  RKIPSEKSTTTPFPLKYQRSVRRQRESSHLDHSVDMDELLASIGETKNEQELYSVLSPYK 120

Query: 121 GRELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHG 180
           GR+LSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHG
Sbjct: 121 GRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHG 180

Query: 181 LFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240
           LFDEMRQRALAADRYTYSTLITYFGKEG+FDAALSWLQKMEQDRVSGDLVLYSNLIELSR
Sbjct: 181 LFDEMRQRALAADRYTYSTLITYFGKEGLFDAALSWLQKMEQDRVSGDLVLYSNLIELSR 240

Query: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTV 300
           KLCDYSKAISIFSRLKRSGITPDIVAYN+MINVFGKAKLFREARFLLKEMRA+GV+PDTV
Sbjct: 241 KLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAMGVVPDTV 300

Query: 301 SYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRM 360
           SYSTLL+MFVENEKFLEALSV SEM EVNCPLDLTTCNIMIDVYGQLDMVKEADRLFW M
Sbjct: 301 SYSTLLSMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWSM 360

Query: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEH 420
           RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEI+QNVVTYNTMIKIYG +LEH
Sbjct: 361 RKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGLSLEH 420

Query: 421 EKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTM 480
           EKATNLVQ+MQ R IEPNAITYSTIISIWGKAGKL+R+AMLFQKLRSS  EIDQVLYQTM
Sbjct: 421 EKATNLVQEMQNRRIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGTEIDQVLYQTM 480

Query: 481 IVAYEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540
           IVAYEKAGLV HAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI
Sbjct: 481 IVAYEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDI 540

Query: 541 SVFECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYME 600
           SVF CMIDLFSRN+KHKNV+EV EKMRSVGHFP+ NVIALVLNAYGKLRDFD ADA+YME
Sbjct: 541 SVFGCMIDLFSRNRKHKNVVEVFEKMRSVGHFPDPNVIALVLNAYGKLRDFDKADAVYME 600

Query: 601 MQEEGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYER 653
           MQEEGC+F DEVHFQMLSLYGAR DYKRLESLFERLDSDPNINKKELHLVVAS YER
Sbjct: 601 MQEEGCVFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASTYER 657

[Close]
BLAST of Chy4G082310 vs. NCBI nr
Match: XP_023521621.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023527980.1 pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1160 bits (3000), Expect = 0.0
Identity = 589/655 (89.92%), Postives = 619/655 (94.50%), Query Frame = 0 

Query: 4   SSIQLQSTSSI--PLFL--IETRNYPKVRFNKIKIKPRTRIPIFTVSSSSTSKDIWRRET 63
           SS+QLQSTSS   P+FL  IETRN  KV  ++ K KPR RI +   SSSSTSKD+WRR+T
Sbjct: 10  SSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISVPRASSSSTSKDVWRRKT 69

Query: 64  PPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRE 123
           P EKSTTT  PQKY+RS RR RESSHLDHS+DMDELLASIGQTKNEQELYS+LSPYKGR+
Sbjct: 70  PSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 129

Query: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183
           LSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHGLFD
Sbjct: 130 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 189

Query: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 243
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC
Sbjct: 190 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 249

Query: 244 DYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTVSYS 303
           DYSKAISIFSRLKRSGITPDIVAYN+MINVFGKAKLFREARFLLKEMRAV V+PDTVSYS
Sbjct: 250 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 309

Query: 304 TLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKM 363
           TLL+MFVENEKFLEALSV SEM EVNCPL+LTTCNIMIDVYGQLDMVKEADRLFW MRKM
Sbjct: 310 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 369

Query: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKA 423
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEI+QNVVTYNTMIKIYGK+LEHEKA
Sbjct: 370 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 429

Query: 424 TNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTMIVA 483
           TNL+Q+MQ RGIEPNAITYSTIISIWGKAGKLDR+AMLFQKLRSS AEIDQVLYQTMIVA
Sbjct: 430 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 489

Query: 484 YEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543
           YE+AGLV HAKRL+ ELKQPDNIPRKTAITILA+AGR+EEATWVFRQAFDAGELKDISVF
Sbjct: 490 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 549

Query: 544 ECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYMEMQE 603
            CMIDLFSRNKKHKNV+EV EKMRSVGHFP+SNVIALVLNAYGKLRDFD ADA+Y EMQE
Sbjct: 550 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYTEMQE 609

Query: 604 EGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERA 654
           EGC+F DEVHFQMLSLYGAR DYKRLE LFERLDSDPNINKKELHLVVASIYERA
Sbjct: 610 EGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERA 664

[Close]
BLAST of Chy4G082310 vs. NCBI nr
Match: XP_022934402.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1159 bits (2997), Expect = 0.0
Identity = 590/655 (90.08%), Postives = 619/655 (94.50%), Query Frame = 0 

Query: 4   SSIQLQSTSSI--PLFL--IETRNYPKVRFNKIKIKPRTRIPIFTVSSSSTSKDIWRRET 63
           SS+QLQSTSS   P+FL  IETRN  KV  ++ K KPR RI I   SSSSTSKDIWRR+T
Sbjct: 9   SSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68

Query: 64  PPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRE 123
             EKSTTT  PQKY+RS RR RESSHLDHS+DMDELLASIGQTKNEQELYS+LSPYKGR+
Sbjct: 69  SSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128

Query: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183
           LSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHGLFD
Sbjct: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188

Query: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 243
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKM+QDRVSGDLVLYSNLIELSRKLC
Sbjct: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMDQDRVSGDLVLYSNLIELSRKLC 248

Query: 244 DYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTVSYS 303
           DYSKAISIFSRLKRSGITPDIVAYN+MINVFGKAKLFREARFLLKEMRAV V+PDTVSYS
Sbjct: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308

Query: 304 TLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKM 363
           TLL+MFVENEKFLEALSV SEM EVNCPL+LTTCNIMIDVYGQLDMVKEADRLFW MRKM
Sbjct: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368

Query: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKA 423
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEI+QNVVTYNTMIKIYGK+LEHEKA
Sbjct: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428

Query: 424 TNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTMIVA 483
           TNL+Q+MQ RGIEPNAITYSTIISIWGKAGKLDR+AMLFQKLRSS AEIDQVLYQTMIVA
Sbjct: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488

Query: 484 YEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543
           YE+AGLV HAKRL+ ELKQPDNIPRKTAITILA+AGR+EEATWVFRQAFDAGELKDISVF
Sbjct: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 548

Query: 544 ECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYMEMQE 603
            CMIDLFSRNKKHKNV+EV EKMRSVGHFP+SNVIALVLNAYGKLRDFD ADA+YMEMQE
Sbjct: 549 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608

Query: 604 EGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERA 654
           EGC+F DEVHFQMLSLYGAR DYKRLE LFERLDSDPNINKKELHLVVASIYERA
Sbjct: 609 EGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIYERA 663

[Close]
BLAST of Chy4G082310 vs. TAIR 10
Match: AT5G39980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 986.1 bits (2548), Expect = 1.8e-287
Identity = 501/657 (76.26%), Postives = 583/657 (88.74%), Query Frame = 0 

Query: 6   IQLQSTSSIPLFLIETRN---YPKVRFNKIKIKPRTRIPIFTVSSSSTS-----KDIWRR 65
           I++ S+SS+ L L+       Y  + F+ I  + R R  IFTVS+SS+S     K +WR+
Sbjct: 3   IEIASSSSLSLPLLPLTRPHIYTSIPFSTIP-EARQRNLIFTVSASSSSESTQNKKVWRK 62

Query: 66  ETPPEKSTTTLLPQKYQRSGRRPRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKG 125
           +  PEK+TT+    +  R  RR + S+ LDH++DMDELLASI QT+NE+EL+S+LS YK 
Sbjct: 63  Q--PEKNTTSSF--QALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKD 122

Query: 126 RELSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGL 185
           R+LS+RFMVSLLSRE+DWQRSLA+LDW++EEA YTPSV+AYNVVLRNVLRAKQ+++AHGL
Sbjct: 123 RQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGL 182

Query: 186 FDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRK 245
           FDEMRQRALA DRYTYSTLIT FGKEGMFD+ALSWLQKMEQDRVSGDLVLYSNLIELSR+
Sbjct: 183 FDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRR 242

Query: 246 LCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTVS 305
           LCDYSKAISIFSRLKRSGITPD+VAYN+MINV+GKAKLFREAR L+KEM   GV+P+TVS
Sbjct: 243 LCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVS 302

Query: 306 YSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMR 365
           YSTLL+++VEN KFLEALSV +EMKEVNC LDLTTCNIMIDVYGQLDMVKEADRLFW +R
Sbjct: 303 YSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 362

Query: 366 KMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHE 425
           KM IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK+I+QNVVTYNTMIKIYGKT+EHE
Sbjct: 363 KMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 422

Query: 426 KATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTMI 485
           KATNLVQ+MQ RGIEPNAITYSTIISIWGKAGKLDR+A LFQKLRSS  EIDQVLYQTMI
Sbjct: 423 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 482

Query: 486 VAYEKAGLVGHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDIS 545
           VAYE+ GL+GHAKRLLHELK PDNIPR+TAITILAKAGR EEATWVFRQAF++GE+KDIS
Sbjct: 483 VAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDIS 542

Query: 546 VFECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYMEM 605
           VF CMI+L+SRN+++ NV+EV EKMR+ G+FP+SNVIA+VLNAYGK R+F+ AD +Y EM
Sbjct: 543 VFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREM 602

Query: 606 QEEGCIFTDEVHFQMLSLYGARNDYKRLESLFERLDSDPNINKKELHLVVASIYERA 655
           QEEGC+F DEVHFQMLSLY ++ D++ +ESLF+RL+SDPN+N KELHLVVA++YERA
Sbjct: 603 QEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERA 654

[Close]
BLAST of Chy4G082310 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 202.6 bits (514), Expect = 1.3e-51
Identity = 129/436 (29.59%), Postives = 230/436 (52.75%), Query Frame = 0 

Query: 151 YTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 210
           Y P+   +N ++  +    +   A  L D M  R    D +TY T++    K G  D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 211 SWLQKMEQDRVSGDLVLYSNLIELSRKLCDY---SKAISIFSRLKRSGITPDIVAYNTMI 270
           S L+KME+ ++  D+V+Y+ +I+    LC+Y   + A+++F+ +   GI P++V YN++I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIID---ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 300

Query: 271 NVFGKAKLFREARFLLKEMRAVGVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCP 330
                   + +A  LL +M    + P+ V++S L++ FV+  K +EA  +  EM + +  
Sbjct: 301 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 331 LDLTTCNIMIDVYGQLDMVKEADRLFWRMRKMGIEPNVVSYNTILRVYGEAELFGEAIHL 390
            D+ T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 420

Query: 391 FRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGK 450
           FR M ++ +  N VTYNT+I+   +  + + A  + + M   G+ P+ ITYS ++    K
Sbjct: 421 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 480

Query: 451 AGKLDRSAMLFQKLRSSRAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELK----QPDNIP 510
            GKL+++ ++F+ L+ S+ E D   Y  MI    KAG V     L   L     +P+ I 
Sbjct: 481 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 540

Query: 511 RKTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVLEKMR 570
             T I+   + G  EEA  +FR+  + G L +   +  +I    R+       E++++MR
Sbjct: 541 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 600

Query: 571 SVGHFPNSNVIALVLN 580
           S G   +++ I++V+N
Sbjct: 601 SCGFVGDASTISMVIN 613

[Close]
BLAST of Chy4G082310 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 201.8 bits (512), Expect = 2.2e-51
Identity = 129/571 (22.59%), Postives = 270/571 (47.29%), Query Frame = 0 

Query: 88  HSIDMDELLASIGQTKNEQELYSVLSPYKGRELSMR---FMVSLLSRESDWQRSLAILDW 147
           +S D++ L+  +        +   L  +K + LS+     +    +   DWQRSL +  +
Sbjct: 72  YSYDVESLINKLSSLPPRGSIARCLDIFKNK-LSLNDFALVFKEFAGRGDWQRSLRLFKY 131

Query: 148 INEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEG 207
           +  +    P+ + Y +++  + R    +    +FDEM  + ++   ++Y+ LI  +G+ G
Sbjct: 132 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 191

Query: 208 MFDAALSWLQKMEQDRVSGDLVLYSNLIE-LSRKLCDYSKAISIFSRLKRSGITPDIVAY 267
            ++ +L  L +M+ +++S  ++ Y+ +I   +R   D+   + +F+ ++  GI PDIV Y
Sbjct: 192 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 251

Query: 268 NTMINVFGKAKLFREARFLLKEMRAVGVMPDTVSYSTLLNMFVENEKFLEALSVISEMKE 327
           NT+++      L  EA  + + M   G++PD  +YS L+  F +  +  +   ++ EM  
Sbjct: 252 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 311

Query: 328 VNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKMGIEPNVVSYNTILRVYGEAELFGE 387
                D+T+ N++++ Y +   +KEA  +F +M+  G  PN  +Y+ +L ++G++  + +
Sbjct: 312 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 371

Query: 388 AIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIIS 447
              LF  M+      +  TYN +I+++G+    ++   L  DM +  IEP+  TY  II 
Sbjct: 372 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 431

Query: 448 IWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTMIVAYEKAGLVGHAK---RLLHELKQPD 507
             GK G  + +  + Q + ++        Y  +I A+ +A L   A      +HE+    
Sbjct: 432 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 491

Query: 508 NIPR-KTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVL 567
           +I    + +   A+ G ++E+  +  +  D+G  ++   F   I+ + +  K +  ++  
Sbjct: 492 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 551

Query: 568 EKMRSVGHFPNSNVIALVLNAYGKLRDFDTADALYMEMQEEGCIFTDEVHFQMLSLYGAR 627
             M      P+   +  VL+ Y   R  D     + EM+    + +   +  ML++YG  
Sbjct: 552 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 611

Query: 628 NDYKRLESLFERLDSDPNINKKELHLVVASI 651
             +  +  L E + S+   N   +H V+  +
Sbjct: 612 ERWDDVNELLEEMLSNRVSN---IHQVIGQM 638

[Close]
BLAST of Chy4G082310 vs. TAIR 10
Match: AT5G02860.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 194.5 bits (493), Expect = 3.6e-49
Identity = 115/437 (26.32%), Postives = 217/437 (49.66%), Query Frame = 0 

Query: 169 KQWELAHGLFD-EMRQRALAA--DRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDL 228
           K+++LA   FD  M+Q+   +  D    + +I+  GKEG   +A +    +++D  S D+
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 208

Query: 229 VLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNTMINVFGK-AKLFREARFLLK 288
             Y++LI        Y +A+++F +++  G  P ++ YN ++NVFGK    + +   L++
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268

Query: 289 EMRAVGVMPDTVSYSTLLNMFVENEKFLEALSVISEMKEVNCPLDLTTCNIMIDVYGQLD 348
           +M++ G+ PD  +Y+TL+          EA  V  EMK      D  T N ++DVYG+  
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328

Query: 349 MVKEADRLFWRMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIKQNVVTYN 408
             KEA ++   M   G  P++V+YN+++  Y    +  EA+ L   M  K  K +V TY 
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388

Query: 409 TMIKIYGKTLEHEKATNLVQDMQKRGIEPNAITYSTIISIWGKAGKLDRSAMLFQKLRSS 468
           T++  + +  + E A ++ ++M+  G +PN  T++  I ++G  GK      +F ++   
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448

Query: 469 RAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELKQPDNIPRK----TAITILAKAGRIEEA 528
               D V + T++  + + G+      +  E+K+   +P +    T I+  ++ G  E+A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 529 TWVFRQAFDAGELKDISVFECMIDLFSRNKKHKNVLEVLEKMRSVGHFPNSNVIALVLNA 588
             V+R+  DAG   D+S +  ++   +R    +   +VL +M      PN      +L+A
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 589 YGKLRDFDTADALYMEM 598
           Y   ++     +L  E+
Sbjct: 569 YANGKEIGLMHSLAEEV 585

[Close]
BLAST of Chy4G082310 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 192.2 bits (487), Expect = 1.8e-48
Identity = 125/446 (28.03%), Postives = 228/446 (51.12%), Query Frame = 0 

Query: 138 SLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLI 197
           ++A++D + E   Y P  + +  ++  +    +   A  L D+M QR    D  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 231

Query: 198 TYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIT 257
               K G  D ALS L+KME+ ++  D+V+Y+ +I+   K      A+++F+ +   GI 
Sbjct: 232 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 291

Query: 258 PDIVAYNTMINVFGKAKLFREARFLLKEMRAVGVMPDTVSYSTLLNMFVENEKFLEALSV 317
           PD+  Y+++I+       + +A  LL +M    + P+ V++S L++ FV+  K +EA  +
Sbjct: 292 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 351

Query: 318 ISEMKEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKMGIEPNVVSYNTILRVYGE 377
             EM + +   D+ T + +I+ +   D + EA  +F  M      PNVV+Y+T+++ + +
Sbjct: 352 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 411

Query: 378 AELFGEAIHLFRLMQRKEIKQNVVTYNTMIKIYGKTLEHEKATNLVQDMQKRGIEPNAIT 437
           A+   E + LFR M ++ +  N VTY T+I  + +  + + A  + + M   G+ PN +T
Sbjct: 412 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 471

Query: 438 YSTIISIWGKAGKLDRSAMLFQKLRSSRAEIDQVLYQTMIVAYEKAGLVGHAKRLLHELK 497
           Y+ ++    K GKL ++ ++F+ L+ S  E D   Y  MI    KAG V     L   L 
Sbjct: 472 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 531

Query: 498 ----QPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVFECMIDLFSRNKKHK 557
                P+ I   T I+   + G  EEA  + ++  + G L +   +  +I    R+   +
Sbjct: 532 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 591

Query: 558 NVLEVLEKMRSVGHFPNSNVIALVLN 580
              E++++MRS G   +++ I LV N
Sbjct: 592 ASAELIKEMRSCGFAGDASTIGLVTN 616

The following BLAST results are available for this feature:
BLAST of Chy4G082310 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FLD82.6e-28676.26Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidop... [more]
Q9LQ141.8e-5029.59Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... [more]
Q9S7Q23.1e-5022.59Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... [more]
Q9LYZ95.0e-4826.32Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
Q9LQ162.5e-4728.03Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX... [more]
BLAST of Chy4G082310 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LCU40.0e+0097.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G827400 PE=4 SV=1[more]
A0A5A7UGV70.0e+0094.40Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B8T90.0e+0094.40pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucumis ... [more]
A0A6J1F2M90.0e+0089.82pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbit... [more]
A0A6J1J8J40.0e+0089.51pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbit... [more]
BLAST of Chy4G082310 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004147489.10.097.72pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucumis sa... [more]
XP_008443439.10.094.82PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic ... [more]
XP_038903074.10.091.17pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Benincasa ... [more]
XP_023521621.10.089.92pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucur... [more]
XP_022934402.10.090.08pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita ... [more]
BLAST of Chy4G082310 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G39980.11.8e-28776.26Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G62930.11.3e-5129.59Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G74850.12.2e-5122.59plastid transcriptionally active 2 [more]
AT5G02860.13.6e-4926.32Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G62910.11.8e-4828.03Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 102..234
e-value: 6.1E-24
score: 86.4
coord: 235..342
e-value: 3.5E-28
score: 100.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 502..657
e-value: 9.4E-20
score: 73.2
coord: 344..501
e-value: 1.2E-39
score: 138.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 540..566
e-value: 0.027
score: 14.7
coord: 577..602
e-value: 0.0032
score: 17.6
coord: 471..497
e-value: 0.077
score: 13.3
coord: 226..256
e-value: 1.2
score: 9.5
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 317..377
e-value: 3.9E-10
score: 39.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 153..198
e-value: 4.3E-10
score: 39.6
coord: 399..442
e-value: 7.4E-15
score: 54.9
coord: 258..305
e-value: 1.2E-11
score: 44.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 191..223
e-value: 3.6E-6
score: 24.8
coord: 401..435
e-value: 6.2E-8
score: 30.4
coord: 577..603
e-value: 3.0E-5
score: 21.9
coord: 332..365
e-value: 2.8E-7
score: 28.3
coord: 296..329
e-value: 3.3E-5
score: 21.8
coord: 538..570
e-value: 9.2E-4
score: 17.2
coord: 156..184
e-value: 0.001
score: 17.1
coord: 261..295
e-value: 3.2E-7
score: 28.1
coord: 366..399
e-value: 5.1E-6
score: 24.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 364..398
score: 10.248873
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 570..604
score: 8.780059
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 469..503
score: 8.736214
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 294..328
score: 10.161182
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 434..468
score: 8.933517
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 329..363
score: 11.947875
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 189..223
score: 9.941957
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 259..293
score: 11.849223
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 224..258
score: 9.229472
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 535..569
score: 9.667924
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 399..433
score: 12.057487
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 154..188
score: 9.393891
IPR012419Cas1p 10 TM acyl transferase domainPFAMPF07779Cas1_AcylTcoord: 792..852
e-value: 2.4E-13
score: 49.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..86
NoneNo IPR availablePANTHERPTHR47447:SF7PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, CHLOROPLASTICcoord: 10..656
NoneNo IPR availablePANTHERPTHR47447OS03G0856100 PROTEINcoord: 10..656

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy4G082310.1Chy4G082310.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0031425 chloroplast RNA processing
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding