Chy4G081790 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G081790
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	photosystem I assembly factor PSA3, chloroplastic
Location	chrH04: 21238423 .. 21240284 (-)
RNA-Seq Expression	Chy4G081790
Synteny	Chy4G081790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGTGACCTCAACTAGCACTACTTCATCTTCTCTCCACTCCAATCCCAAATCCTTCTTCCTCTCTAACCCCATTTCTCCTTCTCCCCTCTTTCTCCGCCAACTTTATGGCCGACGCCGGAACCCGAATTCGGCCGGCGCCTTCTCCATCAAGGCTTACATGGAGAATCCCAACTCTCTGTCCGGTTTTGCAAGTAAGGTGATCGGATCTCTGCCTGTGGTCGGACTGATCGCGAGAATTTTGAGCGATGAAGGCGGCGTCGGCAGTGACATTATCGATTTTGCGGAGTTTCGGAGACGAGTTGGGAAGAAATGTACGATTATGGAGTCTAAAGCTTTCTATGAATTTCAAGAAAGAAAAGGCAAGGTAAATGTGTCTCTTTATTTATGTTTATAATATCCTTTTTAAATCATACTTCATTAACTACTCTACCTTTTTCTTTTTCAAAATAATAATAACTCTACATTTTATAATTAAAAAACAAATACTTATTATAGATAAATTTAATTTTTTTTTTTAAATATTTACCAAGCTTTGCATTAATTGGCATGTCCTTCTAATTTAAAATAATATCTTTAGTTAAACTTTTAATTTCATAAAATTATACTATAAATTTAAATAATAAACATTTTCACATATATTAATATGCTTCTGGAATCCAAAAAAATTCTATAGTTGATAAATATTTTAGTTTATTTTACTATATTTGAAAATGTCTTTTTAAATAATGTATTATAATTTGTACCGTAGTTTAATCATTGCTGATTTGTCTACTGGTTTTAAGCTAAAAAGAATCATAAAAACAAAAAATCATTAAAATAAAAATTCGTACAAAAATAAATTTGACCCGAATAAATTAACTCATGAGTAAATTTTAATTCTTAAAAAAACATTCAACAAAATAGAAAGCTCAAGTGCCACTTTTATCTAATTTATTTTTGTATGTTTTATATTTCATTGAATCCACAGGAATTAATCTCTTTTTAACTTATTTGGAGCAAGAACTAATGAGATGATTAAGATTGCAAAACTCTCCAAGGTTCAAGTTTGAACCCTTATTTTATGAAATTGAAAGTTTATATTACCTATATCAAGTTTGGAGGTGAAATAGGTTTTATTGTACTCTAAAACACATCAATATCTTCAAAAATTAAAATGTGTATTTACTAATTTAAATATATTGCAAGTTTAAGATTAGAATTACAATAATACTTATTAAATCAATCAAACCAAGAAAGGTAAATCATAATAATTTGTGTTGAAGTAGAATAATTGGTTGTGGTAGGCAGGAGAGCCATTGTATGTTCTATTGTGCTGCTGGCTAGCAGCTGTGGGAGCTGGTTTGCTTAAATCAGAGGAAATTTTGGAAGGTGTAGCAAGGCTTAGGATTTCAAATGATATTGAGTTTGAAGAAGAGACTTTCCTTGCTATGATGAATGAGGCTAGAGAGGTTTGTTACTCATACCATACATATATTTTTCCACTTTAAAGTCTCATTTTGCCTAAAATAATAAAACGATGTTCATCTATGTATATAGAAACGAGAAAAACTAAAAGCGGCTGTTCCGAACATTCCGATGGAGGTTCGAATCGAGAAAGCACTCGATGCCATTTACGTTTGTTCATTTGGGAGAGACCCAATAGAGGAAGATGATGAGAAACTTTTAGTCATCATGTTGAGTGCTGTTTTTCCATCTGTTGGGGAAATTGAGATTCAAAGGATTGTGAAAGAGAAAGCAATTAGAATTGCTGAAGGTAAGGACACTGCCATTGTTCCTGAGCCACAGCCTTTGTCAAAAGAAGCTATTTTAGCTCAAATGAAGGACCTTCAATTTCTCCAAGAGAAGAATGAGACTTAG

mRNA sequence

ATGTCCGTGACCTCAACTAGCACTACTTCATCTTCTCTCCACTCCAATCCCAAATCCTTCTTCCTCTCTAACCCCATTTCTCCTTCTCCCCTCTTTCTCCGCCAACTTTATGGCCGACGCCGGAACCCGAATTCGGCCGGCGCCTTCTCCATCAAGGCTTACATGGAGAATCCCAACTCTCTGTCCGGTTTTGCAAGTAAGGTGATCGGATCTCTGCCTGTGGTCGGACTGATCGCGAGAATTTTGAGCGATGAAGGCGGCGTCGGCAGTGACATTATCGATTTTGCGGAGTTTCGGAGACGAGTTGGGAAGAAATGTACGATTATGGAGTCTAAAGCTTTCTATGAATTTCAAGAAAGAAAAGGCAAGGCAGGAGAGCCATTGTATGTTCTATTGTGCTGCTGGCTAGCAGCTGTGGGAGCTGGTTTGCTTAAATCAGAGGAAATTTTGGAAGGTGTAGCAAGGCTTAGGATTTCAAATGATATTGAGTTTGAAGAAGAGACTTTCCTTGCTATGATGAATGAGGCTAGAGAGAAACGAGAAAAACTAAAAGCGGCTGTTCCGAACATTCCGATGGAGGTTCGAATCGAGAAAGCACTCGATGCCATTTACGTTTGTTCATTTGGGAGAGACCCAATAGAGGAAGATGATGAGAAACTTTTAGTCATCATGTTGAGTGCTGTTTTTCCATCTGTTGGGGAAATTGAGATTCAAAGGATTGTGAAAGAGAAAGCAATTAGAATTGCTGAAGGTAAGGACACTGCCATTGTTCCTGAGCCACAGCCTTTGTCAAAAGAAGCTATTTTAGCTCAAATGAAGGACCTTCAATTTCTCCAAGAGAAGAATGAGACTTAG

Coding sequence (CDS)

ATGTCCGTGACCTCAACTAGCACTACTTCATCTTCTCTCCACTCCAATCCCAAATCCTTCTTCCTCTCTAACCCCATTTCTCCTTCTCCCCTCTTTCTCCGCCAACTTTATGGCCGACGCCGGAACCCGAATTCGGCCGGCGCCTTCTCCATCAAGGCTTACATGGAGAATCCCAACTCTCTGTCCGGTTTTGCAAGTAAGGTGATCGGATCTCTGCCTGTGGTCGGACTGATCGCGAGAATTTTGAGCGATGAAGGCGGCGTCGGCAGTGACATTATCGATTTTGCGGAGTTTCGGAGACGAGTTGGGAAGAAATGTACGATTATGGAGTCTAAAGCTTTCTATGAATTTCAAGAAAGAAAAGGCAAGGCAGGAGAGCCATTGTATGTTCTATTGTGCTGCTGGCTAGCAGCTGTGGGAGCTGGTTTGCTTAAATCAGAGGAAATTTTGGAAGGTGTAGCAAGGCTTAGGATTTCAAATGATATTGAGTTTGAAGAAGAGACTTTCCTTGCTATGATGAATGAGGCTAGAGAGAAACGAGAAAAACTAAAAGCGGCTGTTCCGAACATTCCGATGGAGGTTCGAATCGAGAAAGCACTCGATGCCATTTACGTTTGTTCATTTGGGAGAGACCCAATAGAGGAAGATGATGAGAAACTTTTAGTCATCATGTTGAGTGCTGTTTTTCCATCTGTTGGGGAAATTGAGATTCAAAGGATTGTGAAAGAGAAAGCAATTAGAATTGCTGAAGGTAAGGACACTGCCATTGTTCCTGAGCCACAGCCTTTGTCAAAAGAAGCTATTTTAGCTCAAATGAAGGACCTTCAATTTCTCCAAGAGAAGAATGAGACTTAG

Protein sequence

MSVTSTSTTSSSLHSNPKSFFLSNPISPSPLFLRQLYGRRRNPNSAGAFSIKAYMENPNSLSGFASKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKREKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRIVKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKNET*

Homology

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BLAST of Chy4G081790 vs. ExPASy Swiss-Prot
Match: Q9M3C6 (Photosystem I assembly factor PSA3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSA3 PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.3e-85
Identity = 170/276 (61.59%), Postives = 208/276 (75.36%), Query Frame = 0


Query: 10  SSSLHSNPKSFF---LSNPISPSPLFLRQLYGRRRNPNSAGAFSIKAYMENPNSLSGFAS 69
           S+S H    SFF   L NP + S          R   +   A SI+AY+E PNS S FA+
Sbjct: 8   STSFHQISPSFFHLRLRNPSTTS--------SSRPKLDGGFALSIRAYIEKPNSFSTFAN 67

Query: 70  KVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGE 129
           KVIGSLPV+GL+ARI+SDEGGVG D++DFAEFR+RVG KCT  +S+AFYEFQ+R+GKAGE
Sbjct: 68  KVIGSLPVIGLLARIISDEGGVGRDLVDFAEFRKRVGNKCTPDDSRAFYEFQQRRGKAGE 127

Query: 130 PLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKREKLKAA 189
           PLYVLLCCW+AAVGAGLLKSEEILEGV R+ ISND+EFEE+ F+A+M EAR++R KL   
Sbjct: 128 PLYVLLCCWVAAVGAGLLKSEEILEGVTRVSISNDLEFEEQNFIALMTEARQRRAKLNID 187

Query: 190 VPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRIVKEKAI 249
            P IPME+R+EKAL+ IY C F R  IEE+DEKLL +ML AVFPSV + EI+RI+KEKA 
Sbjct: 188 APTIPMELRVEKALEGIYACCFRRGLIEEEDEKLLKVMLIAVFPSVEKSEIERIIKEKAT 247

Query: 250 RIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKN 283
           R+ EG +   V   + L KEAI  QMKDL+FLQ++N
Sbjct: 248 RVEEGGEEENVMAKR-LPKEAIQMQMKDLEFLQQQN 274

[Close]

BLAST of Chy4G081790 vs. ExPASy Swiss-Prot
Match: B4FSG1 (Photosystem I assembly factor PSA3, chloroplastic OS=Zea mays OX=4577 GN=PSA3 PE=2 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 3.0e-79
Identity = 148/232 (63.79%), Postives = 188/232 (81.03%), Query Frame = 0


Query: 50  SIKAYME-NPNSLSGFASKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTI 109
           ++ AYME NPNS +  A +++G+LP+VGL+ARIL+DEGGVG DIIDFAEFRRRV KKCT+
Sbjct: 35  AVVAYMEPNPNSPAAIAGRLVGALPIVGLVARILNDEGGVGGDIIDFAEFRRRVSKKCTV 94

Query: 110 MESKAFYEFQERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEET 169
           M+SKAFY+F +R+GK G+P YVLLCCWLAA+GAGLLK+EEILEGVARLRISNDIEFEEET
Sbjct: 95  MDSKAFYDFNQRRGKPGDPFYVLLCCWLAAIGAGLLKTEEILEGVARLRISNDIEFEEET 154

Query: 170 FLAMMNEAREKREKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAV 229
           F+ MM  A+EKR KLKA  P IPME R EKAL+AIYVC FG+D +E++DEKLL  +L+AV
Sbjct: 155 FIDMMRAAKEKRAKLKAPAPQIPMETRAEKALEAIYVCCFGQDMVEDEDEKLLRAILNAV 214

Query: 230 FPSVGEIEIQRIVKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQE 281
           FPSVG   ++R+V   A ++A G+      + + +SKE    Q+KDL+FL++
Sbjct: 215 FPSVGRAAVERMVASMAKQVASGERKR---DGRTVSKEVQQRQLKDLEFLKQ 263

[Close]

BLAST of Chy4G081790 vs. ExPASy TrEMBL
Match: A0A0A0LCC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G836490 PE=4 SV=1)

HSP 1 Score: 531.2 bits (1367), Expect = 2.7e-147
Identity = 278/284 (97.89%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSPLFLRQLYGRRRNPNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPK FFLSNPISPSPLFLR+LYGRRRNPNSAGAFSIKAYME+PNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKFFFLSNPISPSPLFLRKLYGRRRNPNSAGAFSIKAYMESPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARILSDEGGVG+DIIDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGTDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           +KEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQE NET
Sbjct: 241 LKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQENNET 284

[Close]

BLAST of Chy4G081790 vs. ExPASy TrEMBL
Match: A0A5D3CQC9 (Putative ubiquinone biosynthesis UbiB OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1119G00270 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 1.9e-145
Identity = 275/284 (96.83%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSPLFLRQLYGRRRNPNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPKSFFLSNPISPS LFL QLYGRRR+ NSAGAFSIKAYMENPNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETF+AMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVR+EKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           VKEKAIRIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQEKNET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284

[Close]

BLAST of Chy4G081790 vs. ExPASy TrEMBL
Match: A0A1S3B876 (uncharacterized protein LOC103487086 OS=Cucumis melo OX=3656 GN=LOC103487086 PE=4 SV=1)

HSP 1 Score: 525.0 bits (1351), Expect = 1.9e-145
Identity = 275/284 (96.83%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSPLFLRQLYGRRRNPNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPKSFFLSNPISPS LFL QLYGRRR+ NSAGAFSIKAYMENPNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETF+AMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVR+EKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           VKEKAIRIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQEKNET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284

[Close]

BLAST of Chy4G081790 vs. ExPASy TrEMBL
Match: A0A6J1EQR9 (photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435039 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 8.2e-128
Identity = 246/287 (85.71%), Postives = 265/287 (92.33%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSPLFLRQLY---GRRRNPNSAGAFSIKAYMEN 60
           M+VTSTSTT SS HSNPKSFFL + ISP  L  RQ +   GRRR+P S G  S++AYMEN
Sbjct: 1   MAVTSTSTT-SSFHSNPKSFFLYSLISPPKLLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFASKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFA+KVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEILEGVARLRIS+DIEFEEETFLAMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEILEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEI 240
           EKREKLK AVP IPMEVR+EKALDAIYVCSFGRDPIEEDDEKLLVIMLS+VFP+VG+ EI
Sbjct: 181 EKREKLKVAVPKIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           QRIVKEKA+RIAEGKD AIVPEPQPLSKEAILAQMKDLQFL+E +ET
Sbjct: 241 QRIVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLRENSET 286

[Close]

BLAST of Chy4G081790 vs. ExPASy TrEMBL
Match: A0A6J1JJA4 (photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486319 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.3e-125
Identity = 243/287 (84.67%), Postives = 262/287 (91.29%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSPLFLRQLY---GRRRNPNSAGAFSIKAYMEN 60
           M+VTSTSTT SS HSNPKSFFLS+ ISP  L  RQ +   GRRR+P S G  S++AYMEN
Sbjct: 1   MAVTSTSTT-SSFHSNPKSFFLSSLISPPKLLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFASKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFA+KVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEI EGVARLRIS+DIEFEEETFLAMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEIFEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEI 240
           EKREKLK AV  IPMEVR+EKALDAIYVCSFGRDPIEE DEKLLVIMLS+VFP+VG+ EI
Sbjct: 181 EKREKLKVAVSKIPMEVRVEKALDAIYVCSFGRDPIEEHDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKNET 285
           QR+VKEKA+RIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQE + T
Sbjct: 241 QRMVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQENSGT 286

[Close]

BLAST of Chy4G081790 vs. NCBI nr
Match: XP_004141087.1 (photosystem I assembly factor PSA3, chloroplastic [Cucumis sativus] >KGN59665.1 hypothetical protein Csa_000816 [Cucumis sativus])

HSP 1 Score: 533 bits (1372), Expect = 3.10e-190
Identity = 278/284 (97.89%), Postives = 282/284 (99.30%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSPLFLRQLYGRRRNPNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPK FFLSNPISPSPLFLR+LYGRRRNPNSAGAFSIKAYME+PNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKFFFLSNPISPSPLFLRKLYGRRRNPNSAGAFSIKAYMESPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARILSDEGGVG+DIIDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGTDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           +KEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQE NET
Sbjct: 241 LKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQENNET 284

[Close]

BLAST of Chy4G081790 vs. NCBI nr
Match: XP_008443515.1 (PREDICTED: uncharacterized protein LOC103487086 [Cucumis melo] >KAA0053674.1 putative ubiquinone biosynthesis UbiB [Cucumis melo var. makuwa] >TYK14001.1 putative ubiquinone biosynthesis UbiB [Cucumis melo var. makuwa])

HSP 1 Score: 526 bits (1356), Expect = 8.51e-188
Identity = 275/284 (96.83%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSPLFLRQLYGRRRNPNSAGAFSIKAYMENPNS 60
           MSVTSTSTTSSSLHSNPKSFFLSNPISPS LFL QLYGRRR+ NSAGAFSIKAYMENPNS
Sbjct: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSRLFLPQLYGRRRSSNSAGAFSIKAYMENPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFASKVIGSLPVVGLIARI+SDEGGVGSD+IDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFASKVIGSLPVVGLIARIMSDEGGVGSDLIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETF+AMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFIAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLKAAVPNIPMEVR+EKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI
Sbjct: 181 EKLKAAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240

Query: 241 VKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           VKEKAIRIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQEKNET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284

[Close]

BLAST of Chy4G081790 vs. NCBI nr
Match: XP_038905081.1 (photosystem I assembly factor PSA3, chloroplastic [Benincasa hispida])

HSP 1 Score: 505 bits (1301), Expect = 2.05e-179
Identity = 266/284 (93.66%), Postives = 271/284 (95.42%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSPLFLRQLYGRRRNPNSAGAFSIKAYMENPNS 60
           MSVTSTS+TSSSLHSN KSFFLS PISPS LFLRQ+YGRRR  NSAG  S+KAYMENPNS
Sbjct: 1   MSVTSTSSTSSSLHSNLKSFFLSKPISPSRLFLRQIYGRRRQSNSAGVLSVKAYMENPNS 60

Query: 61  LSGFASKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120
           LSGFA+KVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER
Sbjct: 61  LSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQER 120

Query: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180
           KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR
Sbjct: 121 KGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKR 180

Query: 181 EKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRI 240
           EKLK AVPNIPMEVR+EKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVF SV E EIQRI
Sbjct: 181 EKLKVAVPNIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFASVRETEIQRI 240

Query: 241 VKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           VKEKAIRIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQEK ET
Sbjct: 241 VKEKAIRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQEKTET 284

[Close]

BLAST of Chy4G081790 vs. NCBI nr
Match: KAG7022731.1 (hypothetical protein SDJN02_16466 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 470 bits (1210), Expect = 1.61e-165
Identity = 247/287 (86.06%), Postives = 266/287 (92.68%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSPLFLRQLYG---RRRNPNSAGAFSIKAYMEN 60
           M+VTSTSTTSS  HSNPKSFFLS+ ISP  L  RQ +G   RRR+P S G  S++AYMEN
Sbjct: 1   MAVTSTSTTSS-FHSNPKSFFLSSLISPPKLLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFASKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFA+KVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEILEGVARLRIS+DIEFEEETFLAMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEILEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEI 240
           EKREKLK AVP IPMEVR+EKALDAIYVCSFGRDPIEE+DEKLLVIMLS+VFP+VG+ EI
Sbjct: 181 EKREKLKVAVPKIPMEVRVEKALDAIYVCSFGRDPIEEEDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           QRIVKEKA+RIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQE +ET
Sbjct: 241 QRIVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQENSET 286

[Close]

BLAST of Chy4G081790 vs. NCBI nr
Match: KAG6588962.1 (Photosystem I assembly factor PSA3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 470 bits (1210), Expect = 1.61e-165
Identity = 247/287 (86.06%), Postives = 265/287 (92.33%), Query Frame = 0


Query: 1   MSVTSTSTTSSSLHSNPKSFFLSNPISPSPLFLRQLYG---RRRNPNSAGAFSIKAYMEN 60
           M+VTSTSTTSS  HSNPKSFFLS+ ISP     RQ +G   RRR+P S G  S++AYMEN
Sbjct: 1   MAVTSTSTTSS-FHSNPKSFFLSSLISPPKFLHRQFHGSVGRRRHPTSTGVLSVRAYMEN 60

Query: 61  PNSLSGFASKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEF 120
           PNSLSGFA+KVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIM+SKAFY+F
Sbjct: 61  PNSLSGFANKVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMDSKAFYDF 120

Query: 121 QERKGKAGEPLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAR 180
           QER+GK GEPL+VLLCCWLAAVGAGLLKSEEILEGVARLRIS+DIEFEEETFLAMMNEAR
Sbjct: 121 QERRGKPGEPLFVLLCCWLAAVGAGLLKSEEILEGVARLRISDDIEFEEETFLAMMNEAR 180

Query: 181 EKREKLKAAVPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEI 240
           EKREKLK AVP IPMEVR+EKALDAIYVCSFGRDPIEEDDEKLLVIMLS+VFP+VG+ EI
Sbjct: 181 EKREKLKVAVPKIPMEVRVEKALDAIYVCSFGRDPIEEDDEKLLVIMLSSVFPTVGQSEI 240

Query: 241 QRIVKEKAIRIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKNET 284
           QRIVKEKA+RIAEGKD AIVPEPQPLSKEAILAQMKDLQFLQE +ET
Sbjct: 241 QRIVKEKAVRIAEGKDIAIVPEPQPLSKEAILAQMKDLQFLQENSET 286

[Close]

BLAST of Chy4G081790 vs. TAIR 10
Match: AT3G55250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 315.5 bits (807), Expect = 4.5e-86
Identity = 170/276 (61.59%), Postives = 208/276 (75.36%), Query Frame = 0


Query: 10  SSSLHSNPKSFF---LSNPISPSPLFLRQLYGRRRNPNSAGAFSIKAYMENPNSLSGFAS 69
           S+S H    SFF   L NP + S          R   +   A SI+AY+E PNS S FA+
Sbjct: 8   STSFHQISPSFFHLRLRNPSTTS--------SSRPKLDGGFALSIRAYIEKPNSFSTFAN 67

Query: 70  KVIGSLPVVGLIARILSDEGGVGSDIIDFAEFRRRVGKKCTIMESKAFYEFQERKGKAGE 129
           KVIGSLPV+GL+ARI+SDEGGVG D++DFAEFR+RVG KCT  +S+AFYEFQ+R+GKAGE
Sbjct: 68  KVIGSLPVIGLLARIISDEGGVGRDLVDFAEFRKRVGNKCTPDDSRAFYEFQQRRGKAGE 127

Query: 130 PLYVLLCCWLAAVGAGLLKSEEILEGVARLRISNDIEFEEETFLAMMNEAREKREKLKAA 189
           PLYVLLCCW+AAVGAGLLKSEEILEGV R+ ISND+EFEE+ F+A+M EAR++R KL   
Sbjct: 128 PLYVLLCCWVAAVGAGLLKSEEILEGVTRVSISNDLEFEEQNFIALMTEARQRRAKLNID 187

Query: 190 VPNIPMEVRIEKALDAIYVCSFGRDPIEEDDEKLLVIMLSAVFPSVGEIEIQRIVKEKAI 249
            P IPME+R+EKAL+ IY C F R  IEE+DEKLL +ML AVFPSV + EI+RI+KEKA 
Sbjct: 188 APTIPMELRVEKALEGIYACCFRRGLIEEEDEKLLKVMLIAVFPSVEKSEIERIIKEKAT 247

Query: 250 RIAEGKDTAIVPEPQPLSKEAILAQMKDLQFLQEKN 283
           R+ EG +   V   + L KEAI  QMKDL+FLQ++N
Sbjct: 248 RVEEGGEEENVMAKR-LPKEAIQMQMKDLEFLQQQN 274

The following BLAST results are available for this feature:

BLAST of Chy4G081790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3C6	6.3e-85	61.59	Photosystem I assembly factor PSA3, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
B4FSG1	3.0e-79	63.79	Photosystem I assembly factor PSA3, chloroplastic OS=Zea mays OX=4577 GN=PSA3 PE...	[more]

BLAST of Chy4G081790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCC2	2.7e-147	97.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G836490 PE=4 SV=1	[more]
A0A5D3CQC9	1.9e-145	96.83	Putative ubiquinone biosynthesis UbiB OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B876	1.9e-145	96.83	uncharacterized protein LOC103487086 OS=Cucumis melo OX=3656 GN=LOC103487086 PE=...	[more]
A0A6J1EQR9	8.2e-128	85.71	photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JJA4	1.3e-125	84.67	photosystem I assembly factor PSA3, chloroplastic OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of Chy4G081790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141087.1	3.10e-190	97.89	photosystem I assembly factor PSA3, chloroplastic [Cucumis sativus] >KGN59665.1 ...	[more]
XP_008443515.1	8.51e-188	96.83	PREDICTED: uncharacterized protein LOC103487086 [Cucumis melo] >KAA0053674.1 put...	[more]
XP_038905081.1	2.05e-179	93.66	photosystem I assembly factor PSA3, chloroplastic [Benincasa hispida]	[more]
KAG7022731.1	1.61e-165	86.06	hypothetical protein SDJN02_16466 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6588962.1	1.61e-165	86.06	Photosystem I assembly factor PSA3, chloroplastic, partial [Cucurbita argyrosper...	[more]

BLAST of Chy4G081790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55250.1	4.5e-86	61.59	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037736	Photosystem I assembly factor PSA3	PANTHER	PTHR36770	PHOTOSYSTEM I ASSEMBLY FACTOR PSA3, CHLOROPLASTIC	coord: 23..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G081790.1	Chy4G081790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048564	photosystem I assembly
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0098572	stromal side of plastid thylakoid membrane