Chy4G081490 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G081490
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	LOB domain-containing protein
Location	chrH04: 20958581 .. 20959551 (+)
RNA-Seq Expression	Chy4G081490
Synteny	Chy4G081490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAAGAAAGACGGCTCTGACAGACCCAAAAGAAAGGTACAAAAAAATTAGGATGTCGCATAGCTGTCACATGAAAATTCAGCAGTTGTTGTATTGTATCTTTGTGTTTTTTTTTTTTCAAAACAATTTTCATATTTAAAACCATCAATTTATGGTGATCTTAAATTAATAAACTACTCCTTATCTTCTCTTTCTCTCTCTCTCTAAACCTATACAAGATCTTCAAAATTCAGCCTAAGATTCATAATCAAAGGTTCAACTTCTACACACCCCCATCTCATAAGAAATCAAACCTTTTCTTCTTATACAACTAATTTTAATTCTATGTAATATGTTACCAAAGAAAGTGTAATTCTGATGTCTATTTAATTTGTTACTCTCTTTGTTCTTTGAGTTATCTTAATTTCCTGTTTAATCCTTTTCATTTGTAGGAAGATGTCTTCTTCCACCTACTCTAATTCTCCTTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGCCTACCAGATTGTGTTTTTGCGCCATATTTTCCGCCCGAAGAGCCTCAAAAGTTTGCCAATGTTCACAAGATCTTTGGTGCCAGTAATGTCAGCAAACTGTTGAATGAAGTCCAGCCGCATCAGCGGGAGGATGCTGTGAACTCGCTCGCCTACGAGGCCGAGGCAAGGATGAAAGACCCTGTGTATGGCTGCGTTGGCGCCATCTCTATACTCCAAAGGCAAGTCATCAAGCTCCAAAAAGAGCTCGATGCTACTAACGCCGACCTCATTCGCTATGCCTGCAGTGAAATCCCAGCCCCATCTCCGTCTTCATCGTCGCAATATGCTCGAAGGTCGTCATCAACAAGCCACGAGGGAAGCTCGTCTATTTCTAGCTATGGTCATTACTATACTGGTCTCTACTTTTCTCCATGGAGTAACAACAATAATGGCCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAA

mRNA sequence

ATGGTAAGAAAGACGGCTCTGACAGACCCAAAAGAAAGGAAGATGTCTTCTTCCACCTACTCTAATTCTCCTTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGCCTACCAGATTGTGTTTTTGCGCCATATTTTCCGCCCGAAGAGCCTCAAAAGTTTGCCAATGTTCACAAGATCTTTGGTGCCAGTAATGTCAGCAAACTGTTGAATGAAGTCCAGCCGCATCAGCGGGAGGATGCTGTGAACTCGCTCGCCTACGAGGCCGAGGCAAGGATGAAAGACCCTGTGTATGGCTGCGTTGGCGCCATCTCTATACTCCAAAGGCAAGTCATCAAGCTCCAAAAAGAGCTCGATGCTACTAACGCCGACCTCATTCGCTATGCCTGCAGTGAAATCCCAGCCCCATCTCCGTCTTCATCGTCGCAATATGCTCGAAGGTCGTCATCAACAAGCCACGAGGGAAGCTCGTCTATTTCTAGCTATGGTCATTACTATACTGGTCTCTACTTTTCTCCATGGAGTAACAACAATAATGGCCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAA

Coding sequence (CDS)

ATGGTAAGAAAGACGGCTCTGACAGACCCAAAAGAAAGGAAGATGTCTTCTTCCACCTACTCTAATTCTCCTTGTGCAGCCTGCAAGTTCCTACGTCGAAAATGCCTACCAGATTGTGTTTTTGCGCCATATTTTCCGCCCGAAGAGCCTCAAAAGTTTGCCAATGTTCACAAGATCTTTGGTGCCAGTAATGTCAGCAAACTGTTGAATGAAGTCCAGCCGCATCAGCGGGAGGATGCTGTGAACTCGCTCGCCTACGAGGCCGAGGCAAGGATGAAAGACCCTGTGTATGGCTGCGTTGGCGCCATCTCTATACTCCAAAGGCAAGTCATCAAGCTCCAAAAAGAGCTCGATGCTACTAACGCCGACCTCATTCGCTATGCCTGCAGTGAAATCCCAGCCCCATCTCCGTCTTCATCGTCGCAATATGCTCGAAGGTCGTCATCAACAAGCCACGAGGGAAGCTCGTCTATTTCTAGCTATGGTCATTACTATACTGGTCTCTACTTTTCTCCATGGAGTAACAACAATAATGGCCCTTGTGGAGATGGCCATGACAAAGGAGAATACAAGTAA

Protein sequence

MVRKTALTDPKERKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPAPSPSSSSQYARRSSSTSHEGSSSISSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK*

Homology

[Close]

BLAST of Chy4G081490 vs. ExPASy Swiss-Prot
Match: Q8L8Q3 (LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 SV=3)

HSP 1 Score: 203.8 bits (517), Expect = 1.8e-51
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 18  STYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQR 77
           S Y+NSPCAACKFLRRKC  DCVFAPYFPPEEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 78  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYA 129
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQ+EL+ TNADL+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of Chy4G081490 vs. ExPASy Swiss-Prot
Match: Q9FML4 (Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.9e-48
Identity = 110/186 (59.14%), Postives = 125/186 (67.20%), Query Frame = 0


Query: 16  SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 75
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 76  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA- 135
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 136 -----------PSPSSSSQYARRSSSTSHEGSSSISSY------GHYYTGLYFSPWSNNN 184
                      P P  S Q    +      G+S + +       G Y T   F PW+N +
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNPVYRLSGASPVMNQMPRGTGGSYGT---FLPWNNGH 182

[Close]

BLAST of Chy4G081490 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.6e-42
Identity = 81/123 (65.85%), Postives = 101/123 (82.11%), Query Frame = 0


Query: 17  SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQ 76
           +S+ +NSPCAACKFLRRKC P+CVFAPYFPP++PQKFANVHK+FGASNV+KLLNE+ P Q
Sbjct: 2   ASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQ 61

Query: 77  REDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPAPS 136
           REDAVNSLAYEA+ R++DPVYGCVG IS+LQ Q+ +LQ +L    ++L +Y    I A +
Sbjct: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAAT 121

Query: 137 PSS 140
             S
Sbjct: 122 HQS 124

[Close]

BLAST of Chy4G081490 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.1e-40
Identity = 77/121 (63.64%), Postives = 98/121 (80.99%), Query Frame = 0


Query: 21  SNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDA 80
           + SPCAACKFLRRKC PDCVFAPYFPP+ PQKF +VH++FGASNV+KLLNE+ P+QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 81  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPAPSPSSS 140
           VNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L     +L +Y  +   A + S+S
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASAS 154

Query: 141 S 142
           +
Sbjct: 155 T 155

[Close]

BLAST of Chy4G081490 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.1e-40
Identity = 77/121 (63.64%), Postives = 98/121 (80.99%), Query Frame = 0


Query: 21  SNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDA 80
           + SPCAACKFLRRKC PDCVFAPYFPP+ PQKF +VH++FGASNV+KLLNE+ P+QREDA
Sbjct: 35  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQREDA 94

Query: 81  VNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPAPSPSSS 140
           VNSLAYEA+ R++DPVYGCV  ISILQR + +LQ++L     +L +Y  +   A + S+S
Sbjct: 95  VNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAAASAS 154

Query: 141 S 142
           +
Sbjct: 155 T 155

[Close]

BLAST of Chy4G081490 vs. ExPASy TrEMBL
Match: A0A0A0LI15 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G839790 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96
Identity = 182/193 (94.30%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 4   KTALTDPKER-----KMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHK 63
           K  LT+ +ER     KMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHK
Sbjct: 14  KQQLTERRERGKNYWKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHK 73

Query: 64  IFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELD 123
           IFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELD
Sbjct: 74  IFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELD 133

Query: 124 ATNADLIRYACSEIPAPSPSSSSQYARRSSSTSHEGSSSISSYGHYYTGLYFSPWSNNNN 183
           ATNADLIRYACSEIPAPSPSSSSQYARRSSSTSHEGSSS SSYGHYYTGLYFSPWSNNNN
Sbjct: 134 ATNADLIRYACSEIPAPSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNN 193

Query: 184 GPCGDGHDKGEYK 192
           GPCGDGHDKGEYK
Sbjct: 194 GPCGDGHDKGEYK 206

[Close]

BLAST of Chy4G081490 vs. ExPASy TrEMBL
Match: A0A5D3BPW0 (LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1545G00030 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.6e-95
Identity = 175/177 (98.87%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 15  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 74
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 75  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 134
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 135 PSPSSSSQYARRSSSTSHEGSSSISSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 192
           PSPSSSSQYARRSSSTSHEGSSS SSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of Chy4G081490 vs. ExPASy TrEMBL
Match: A0A1S3B938 (LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 3.6e-95
Identity = 175/177 (98.87%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 15  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 74
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 75  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 134
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 135 PSPSSSSQYARRSSSTSHEGSSSISSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 192
           PSPSSSSQYARRSSSTSHEGSSS SSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of Chy4G081490 vs. ExPASy TrEMBL
Match: A0A6J1DD95 (LOB domain-containing protein 25-like OS=Momordica charantia OX=3673 GN=LOC111019975 PE=3 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.0e-89
Identity = 171/181 (94.48%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 14  KMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ 73
           KM+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ
Sbjct: 14  KMASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ 73

Query: 74  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIP 133
           PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+EIP
Sbjct: 74  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIP 133

Query: 134 A--PSPSSSSQYARRSSSTSHEGSSSISSYGHYYTGLYFSPWSNNNNGPCGDGHDK-GEY 192
           A  PSPSSSSQYARRSSST+HEGSSS SSYGHYY+GLYFSPWS NNNGPCGDGHDK GEY
Sbjct: 134 APSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWS-NNNGPCGDGHDKGGEY 193

[Close]

BLAST of Chy4G081490 vs. ExPASy TrEMBL
Match: A0A6J1FAW3 (LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111442374 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.1e-88
Identity = 164/177 (92.66%), Postives = 172/177 (97.18%), Query Frame = 0


Query: 15  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 74
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 75  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 134
           HQR+DAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+EIPA
Sbjct: 61  HQRDDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACTEIPA 120

Query: 135 PSPSSSSQYARRSSSTSHEGSSSISSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 192
           PSPSSSSQYARRSSSTSH+GSSS SSYGHYY+  YFSPWSN++NG CGDGHDK E+K
Sbjct: 121 PSPSSSSQYARRSSSTSHDGSSSTSSYGHYYSNPYFSPWSNSHNGSCGDGHDKAEFK 177

[Close]

BLAST of Chy4G081490 vs. NCBI nr
Match: XP_004141196.1 (LOB domain-containing protein 25 isoform X1 [Cucumis sativus])

HSP 1 Score: 361 bits (927), Expect = 1.96e-125
Identity = 182/193 (94.30%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 4   KTALTDPKER-----KMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHK 63
           K  LT+ +ER     KMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHK
Sbjct: 3   KQQLTERRERGKNYWKMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHK 62

Query: 64  IFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELD 123
           IFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELD
Sbjct: 63  IFGASNVSKLLNEVQPHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELD 122

Query: 124 ATNADLIRYACSEIPAPSPSSSSQYARRSSSTSHEGSSSISSYGHYYTGLYFSPWSNNNN 183
           ATNADLIRYACSEIPAPSPSSSSQYARRSSSTSHEGSSS SSYGHYYTGLYFSPWSNNNN
Sbjct: 123 ATNADLIRYACSEIPAPSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNN 182

Query: 184 GPCGDGHDKGEYK 191
           GPCGDGHDKGEYK
Sbjct: 183 GPCGDGHDKGEYK 195

[Close]

BLAST of Chy4G081490 vs. NCBI nr
Match: XP_011652293.1 (LOB domain-containing protein 25 isoform X2 [Cucumis sativus] >KAE8651263.1 hypothetical protein Csa_001141 [Cucumis sativus])

HSP 1 Score: 357 bits (917), Expect = 3.48e-124
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 15  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 74
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 75  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 134
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 120

Query: 135 PSPSSSSQYARRSSSTSHEGSSSISSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 191
           PSPSSSSQYARRSSSTSHEGSSS SSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of Chy4G081490 vs. NCBI nr
Match: XP_008443563.1 (PREDICTED: LOB domain-containing protein 25-like [Cucumis melo] >KAA0053633.1 LOB domain-containing protein 25-like [Cucumis melo var. makuwa] >TYK00802.1 LOB domain-containing protein 25-like [Cucumis melo var. makuwa])

HSP 1 Score: 356 bits (914), Expect = 9.96e-124
Identity = 175/177 (98.87%), Postives = 176/177 (99.44%), Query Frame = 0


Query: 15  MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 74
           MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP
Sbjct: 1   MSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQP 60

Query: 75  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA 134
           HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSE+PA
Sbjct: 61  HQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEMPA 120

Query: 135 PSPSSSSQYARRSSSTSHEGSSSISSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 191
           PSPSSSSQYARRSSSTSHEGSSS SSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 121 PSPSSSSQYARRSSSTSHEGSSSTSSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 177

[Close]

BLAST of Chy4G081490 vs. NCBI nr
Match: XP_038905774.1 (LOB domain-containing protein 25-like [Benincasa hispida])

HSP 1 Score: 354 bits (908), Expect = 1.39e-122
Identity = 174/178 (97.75%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 14  KMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ 73
           KMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ
Sbjct: 15  KMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ 74

Query: 74  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIP 133
           PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIP
Sbjct: 75  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIP 134

Query: 134 APSPSSSSQYARRSSSTSHEGSSSISSYGHYYTGLYFSPWSNNNNGPCGDGHDKGEYK 191
           APSPSSSSQYAR+SSSTSHE SSS SSYGHYY+GLYFSPWSNNNNGPCGDGHDKGEYK
Sbjct: 135 APSPSSSSQYARKSSSTSHEASSSTSSYGHYYSGLYFSPWSNNNNGPCGDGHDKGEYK 192

[Close]

BLAST of Chy4G081490 vs. NCBI nr
Match: XP_022152200.1 (LOB domain-containing protein 25-like [Momordica charantia])

HSP 1 Score: 336 bits (861), Expect = 2.10e-115
Identity = 171/181 (94.48%), Postives = 176/181 (97.24%), Query Frame = 0


Query: 14  KMSSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ 73
           KM+SSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ
Sbjct: 14  KMASSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQ 73

Query: 74  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIP 133
           PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNA+LIRYAC+EIP
Sbjct: 74  PHQREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNANLIRYACNEIP 133

Query: 134 APSPS--SSSQYARRSSSTSHEGSSSISSYGHYYTGLYFSPWSNNNNGPCGDGHDKG-EY 191
           APSPS  SSSQYARRSSST+HEGSSS SSYGHYY+GLYFSPWSNNN GPCGDGHDKG EY
Sbjct: 134 APSPSPSSSSQYARRSSSTNHEGSSSTSSYGHYYSGLYFSPWSNNN-GPCGDGHDKGGEY 193

[Close]

BLAST of Chy4G081490 vs. TAIR 10
Match: AT3G27650.1 (LOB domain-containing protein 25 )

HSP 1 Score: 203.8 bits (517), Expect = 1.3e-52
Identity = 94/111 (84.68%), Postives = 105/111 (94.59%), Query Frame = 0


Query: 18  STYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQR 77
           S Y+NSPCAACKFLRRKC  DCVFAPYFPPEEP KFANVH+IFGASNVSK+L+EV PHQR
Sbjct: 33  SNYTNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQR 92

Query: 78  EDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYA 129
           EDAVNSLAYEAEAR+KDPVYGCVGAIS+LQRQV++LQ+EL+ TNADL+RYA
Sbjct: 93  EDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYA 143

[Close]

BLAST of Chy4G081490 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-49
Identity = 110/186 (59.14%), Postives = 125/186 (67.20%), Query Frame = 0


Query: 16  SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 75
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 76  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA- 135
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 136 -----------PSPSSSSQYARRSSSTSHEGSSSISSY------GHYYTGLYFSPWSNNN 184
                      P P  S Q    +      G+S + +       G Y T   F PW+N +
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNPVYRLSGASPVMNQMPRGTGGSYGT---FLPWNNGH 182

[Close]

BLAST of Chy4G081490 vs. TAIR 10
Match: AT5G63090.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-49
Identity = 110/186 (59.14%), Postives = 125/186 (67.20%), Query Frame = 0


Query: 16  SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 75
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 76  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA- 135
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 136 -----------PSPSSSSQYARRSSSTSHEGSSSISSY------GHYYTGLYFSPWSNNN 184
                      P P  S Q    +      G+S + +       G Y T   F PW+N +
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNPVYRLSGASPVMNQMPRGTGGSYGT---FLPWNNGH 182

[Close]

BLAST of Chy4G081490 vs. TAIR 10
Match: AT5G63090.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-49
Identity = 110/186 (59.14%), Postives = 125/186 (67.20%), Query Frame = 0


Query: 16  SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 75
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 76  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA- 135
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 136 -----------PSPSSSSQYARRSSSTSHEGSSSISSY------GHYYTGLYFSPWSNNN 184
                      P P  S Q    +      G+S + +       G Y T   F PW+N +
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNPVYRLSGASPVMNQMPRGTGGSYGT---FLPWNNGH 182

[Close]

BLAST of Chy4G081490 vs. TAIR 10
Match: AT5G63090.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 193.7 bits (491), Expect = 1.3e-49
Identity = 110/186 (59.14%), Postives = 125/186 (67.20%), Query Frame = 0


Query: 16  SSSTYSNSPCAACKFLRRKCLPDCVFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPH 75
           SSS   NSPCAACKFLRRKC+P C+FAPYFPPEEP KFANVHKIFGASNV+KLLNE+ PH
Sbjct: 3   SSSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPH 62

Query: 76  QREDAVNSLAYEAEARMKDPVYGCVGAISILQRQVIKLQKELDATNADLIRYACSEIPA- 135
           QREDAVNSLAYEAEAR++DPVYGCVGAIS LQRQV +LQKELDA NADL  Y  S   A 
Sbjct: 63  QREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAG 122

Query: 136 -----------PSPSSSSQYARRSSSTSHEGSSSISSY------GHYYTGLYFSPWSNNN 184
                      P P  S Q    +      G+S + +       G Y T   F PW+N +
Sbjct: 123 APGNVVDLVFQPQPLPSQQLPPLNPVYRLSGASPVMNQMPRGTGGSYGT---FLPWNNGH 182

The following BLAST results are available for this feature:

BLAST of Chy4G081490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8Q3	1.8e-51	84.68	LOB domain-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=LBD25 PE=2 S...	[more]
Q9FML4	1.9e-48	59.14	Protein LATERAL ORGAN BOUNDARIES OS=Arabidopsis thaliana OX=3702 GN=LOB PE=1 SV=...	[more]
O04479	2.6e-42	65.85	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
A2WXT0	7.1e-40	63.64	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	7.1e-40	63.64	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]

BLAST of Chy4G081490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LI15	1.1e-96	94.30	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G839790 PE=3 SV...	[more]
A0A5D3BPW0	3.6e-95	98.87	LOB domain-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3B938	3.6e-95	98.87	LOB domain-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103487119 PE...	[more]
A0A6J1DD95	5.0e-89	94.48	LOB domain-containing protein 25-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1FAW3	1.1e-88	92.66	LOB domain-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111442...	[more]

BLAST of Chy4G081490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141196.1	1.96e-125	94.30	LOB domain-containing protein 25 isoform X1 [Cucumis sativus]	[more]
XP_011652293.1	3.48e-124	99.44	LOB domain-containing protein 25 isoform X2 [Cucumis sativus] >KAE8651263.1 hypo...	[more]
XP_008443563.1	9.96e-124	98.87	PREDICTED: LOB domain-containing protein 25-like [Cucumis melo] >KAA0053633.1 LO...	[more]
XP_038905774.1	1.39e-122	97.75	LOB domain-containing protein 25-like [Benincasa hispida]	[more]
XP_022152200.1	2.10e-115	94.48	LOB domain-containing protein 25-like [Momordica charantia]	[more]

BLAST of Chy4G081490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27650.1	1.3e-52	84.68	LOB domain-containing protein 25	[more]
AT5G63090.2	1.3e-49	59.14	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.3	1.3e-49	59.14	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.1	1.3e-49	59.14	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.4	1.3e-49	59.14	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 103..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..191
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 15..178
None	No IPR available	PANTHER	PTHR31301:SF12	LOB DOMAIN-CONTAINING PROTEIN 25	coord: 15..178
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 24..120 e-value: 2.9E-42 score: 143.2
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 23..124 score: 27.625731

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G081490.1	Chy4G081490.1	mRNA