Chy4G081300 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G081300
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH04: 20782352 .. 20786476 (-)
RNA-Seq Expression	Chy4G081300
Synteny	Chy4G081300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAGTTCTTCAGTTCTTTATCCCCATTCATTATTTTTAGCTTACACCTTCCTCGTTCTTCCATTTATGTTCAGGTCAAAGCCGCTCCCTTGTCCGTTTTCTTAGACAGCGTCGATCCTTTGCTGTTTCTACGGAAGAGTACAGAAAACGGAATTACGCTGATAATGTTTCCGAGTACAAAACTGTAATTGCCTCCCTCACTGCCCAGAGAAGGTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTGATTGATTGATTTGTTGTTCTTTTTATTCGTGGGTATTTAAAATGCTTTGTTGTTCAATACGTTTCTGGTTTAGGTACTTCTCATTGACGGATGTGTATGACGATATGATGTTGGATGGAGTGCAGCCTACAATGGACGTTTTCCATTTACTGATATCTGGAACCATGAAAGGCGCTCGTTTCCAGCATGCTTTTTTTTTCAGGGATGAAATGAAGGCCATGGGTTTGATTCCTGATGTAGGTAACTTCTTGAATATCAATTGAGTCTTTTTGGCCTCTTTCATTATGCTTGGCTCTTTCCATTGATCATTACCTTTTTTCTGTACTTGCATATATGTTTTGCAGGTTAGTCTGTATAACATGCTGATCTCATTATGTGGTAAATGTAACAACTCTGAAGAGGCTGTCCGGGTAGGTTTCTATGTGTTCTTAAAATGTTGTTTCAGGTTGTTTTGGAAGTTTGAAGGAAAATCTGGACCCGTTTTTTAATTGTCAACTATTTTATATTTAAATTGAAGATCTTAGATGAGATGAGGAGATATGAAGTGAAGCCAAATTCACAGACGTACATCTGTCTACTTAATGCTTGTGCAGCTGCTGGTAGATTAGATCGCGTGTATGCTTCTTCTTTCACAACCTAACCTCTTATCATTCAGCCTGCAAGGATTATACTCCTGTTTATTGATCTATGTCATGTATAAATGGATGAGAGTGAAATTATCAGCAGTGCATTCACTTATTTTCTACTTGGTTGGTTTAATAGTTGTCTGTCATTTTTTTATCAATATACTAGGTATACGATTGTCAGAGATATGACTTCTGCTGGGCTTGGCTTAAACAAGTTCTGCTATGCTGGACTTATAGCTGCACATATGAACAAGAAACCTGTGGCAGATGATTTTGATACTAAAGTATAAACCATCTCAGCTGTTCTTTATGTCCTTGTTAATATGTGGTTTGTGATATATCAATACAATGCTACTTTTCTATGATTAGGTGGTTGAATTTGTTGAACGGTCAAAGGAATGGTTATCGGTAGATGCATCAAGTGTAACAGCTGAAAATTTTATGATGGGTGTTTCAGAAGAGGAATTGTACAATATTCCGACTGCTGAATATGTTCACAGACGTGGAGGATTTTTAAACAAACAATTGACTATTTATCATGTTGCTTTAAATGCTTGTGCAAATCTCAAGAATGTGAAGGTATCTGACTCATAATTTCACAATATTTCGATTTATATTATTGGATAAACTTAATCAGATTAGGGTTTCTTTATTCAGTTATGTTCTACATATATGATTAGTTGAGCCATTCTGCTATTGATAGGTCTCCTGCTATTATTTCTTACATAGTAGATACCATCTATTCTCCTTTATAACTTAATTTTTATCTAATATTTTCATATATTACGTGTTAACTTCCTCGTCATGTATTTTCATATAAAATACTTGTTTGTTTCTTATCAGTTTTTGTTTCTTATAATCTAAGTAGGTTATGGAGACCATAATGGATATGTTAAAGAAGGATGGAAAAACTCCCGACGTCTACATGATAATGCAAGTTATGAGGTAAAGGGCTCAGTCCAAAAATTAAATTCTGTTGTCTATGGCTCCATGCAGTTTCTAATTAAATGTCACTGCATAGATCAATTTGATTGGACTATTGCATTGATTGCATGGAAATCACTCACAATTACCCCAGTAATTGAAAGCCAACAATTTTGTTTGATTGCGCTGGTTTTCTTTAGCTGTTCATTAGTTTGCTTCTTGTTTTGATGAGAATGACCAGGGTGATAAATTTTAAAGATCAGATTGTTATAAGATTATAACTATAAAGTTTGCGTAGATCTAATGGAACTACTGATTTGGCCTTGTTTGTGCATTTGCCTGCCATTGATTAAGCTTAATCTAACATGGTTGCAAGTTGAGTGTTTTTTTTGGTATGGCTTTCGATTACGCCAATGATGGAAGCTTGTGTTGGATTGATTATGTTATTGTAGAGGTTGGTGCTTTCTTGTATTTTCATATCCTTATCATGTAGCTTGAATGAAAGTTGCGAGGATTGTACATCAGCACTATGTATAGGTTGCAGTCGTGTTGTTTCATTAGTTTTGACATCTCATTTGTAGGATTCTTGGTTATTAGAATTCCTACCCACTCAGTGATTTTTTTTGTTCTATTGAAATTACAATGTAACCCAATCCATGTTTATTGGAAGAACTGCTAATAGTCTAATACAGATTTTCATCTAAATAGATGTGTGGAGTTTGAGGCTTAATCATAAAATTGATTATTTTGGACATAGGATGGATGAGTAAAGTCATCAATACTATTCTAGGATCGTCAATTTTATTAGTTGTTCTGTGATTTGACAGTTAGCTTCTCACAGGTGCTATCTACATTCTGGAGATATTGATCGTGGTCATAAAGCTTTTGAGGAGCACTTAAATTCTGGGGGTTCTATAGCACCTGAAATCTATACAGTGAGTTTGGCCCAACTATGTTTCTGGCTTCTGCTTTTACAGCACTAAAATATTACTCCATATTAACTGTTCTTAACCAAAAAGGAGATATCTTTATATATATATATATGTTCTACTGTCCATCTACACGTTTTCTGTTTTCTTTGGAAATTCCTGAAAATCTAGAGTGAGTTAACTTTTTCCAATATATTTTATCTCCCTTGCAAATGAGATTTCTTTAGTATAGACACTTCAAATGAACAATACGAGAGTTTTTATTAGTAAGCATTCAAGGTAACCACTGCGGATATTTAGCAACGGTTTTCATTTGGCTGTAGACGCTTGTGGAAGGAGCCATGATTGGTTATACACCAAAGGGAATGCAATTGGCTCAAGAAACACTGGTAACTTCCAATTTCTACTGAAGTTACAATTGAAATTGAGTTGATCTTAGTAATGCGATGTTGATTATTGCTTATTGCAGGAAAACATGAATTCCAGGGGCTTTTTCTTGAACCCCAGATCAGGGAGTGAGCTTCTCCTTGCAGCTGCGGGTGAAAAGGTAGGCCGACGGTTTATTACATTTTAGTTCACAAGAGACCCTTGTGGTTAGCAATTGGCTACTCAAAATTCTTACACTTGTTACTTCGAGGTCCATATGATTCAGAATATGAGTTTAACTTTTTCATATTACGATGCAGACTGGTGGTTATACAACTGCCAATTATATATGGGACCTCTTGCGAGCTCGAGAGATAACTCCTTTATTCCCTGCTGTGGATGCATATTACAAGGGATTGAAGGTACTTCTCTTTCTCTGATCTTTAATTCTTTTGTTATGTAATTTGTTATTCTTGGTGTTGATATTTGATAATTAATACATGCAACTTCCTTCTACTAGTAGTTGAGGTCTGGTTGAATTGAGAATTTGTCGAGTAATCCAACAACTCACTGCATTCATTTCTCTGATGTTTTTTGGTTTTCTTTTTGTGACATTTTATTCTCGTGTCTTCGTGCAACTAAAGTGTAATTACAACATTTGATTTTAACCATCATGGTTAGGCCTAGTGGTACAGTGATAAAAAGGGAGACATAGTCTCAATAATTAAGTAAGAGGTCATGGGTTCAATCAATGGTGTACCTAGGAATTAATTTTCTACTAAAGGGTCAAGTGGGTCGAGACACTTGCGAATATAAGAAAAAGAAGAAAAATTACAACATTTGATTTTAAATGGTTTGCTAGTTTAAATCAAACCTTCTGTCAAGTTCTCTTATCATTTGACAACGGCAACTATTTGAATTTCAAAATGCAGAAACGTGAGATTCCAGAAGACGATGCTAGGCTTTTATTAGTTACTCGAATCCACGAAAATCTTCAAGCCAGATTTGGTGGTGACCGAGCATAA

mRNA sequence

ATGAAGAAGTTCTTCAGTTCTTTATCCCCATTCATTATTTTTAGCTTACACCTTCCTCGTTCTTCCATTTATGTTCAGGTCAAAGCCGCTCCCTTGTCCGTTTTCTTAGACAGCGTCGATCCTTTGCTGTTTCTACGGAAGAGTACAGAAAACGGAATTACGCTGATAATGTTTCCGAGTACAAAACTGTACTTCTCATTGACGGATGTGTATGACGATATGATGTTGGATGGAGTGCAGCCTACAATGGACGTTTTCCATTTACTGATATCTGGAACCATGAAAGGCGCTCGTTTCCAGCATGCTTTTTTTTTCAGGGATGAAATGAAGGCCATGGGTTTGATTCCTGATGTTAGTCTGTATAACATGCTGATCTCATTATGTGGTAAATGTAACAACTCTGAAGAGGCTGTCCGGATCTTAGATGAGATGAGGAGATATGAAGTGAAGCCAAATTCACAGACGTACATCTGTCTACTTAATGCTTGTGCAGCTGCTGGTAGATTAGATCGCGTGTATACGATTGTCAGAGATATGACTTCTGCTGGGCTTGGCTTAAACAAGTTCTGCTATGCTGGACTTATAGCTGCACATATGAACAAGAAACCTGTGGCAGATGATTTTGATACTAAAGTGGTTGAATTTGTTGAACGGTCAAAGGAATGGTTATCGGTAGATGCATCAAGTGTAACAGCTGAAAATTTTATGATGGGTGTTTCAGAAGAGGAATTGTACAATATTCCGACTGCTGAATATGTTCACAGACGTGGAGGATTTTTAAACAAACAATTGACTATTTATCATGTTGCTTTAAATGCTTGTGCAAATCTCAAGAATGTGAAGGTTATGGAGACCATAATGGATATGTTAAAGAAGGATGGAAAAACTCCCGACGTCTACATGATAATGCAAGTTATGAGGTGCTATCTACATTCTGGAGATATTGATCGTGGTCATAAAGCTTTTGAGGAGCACTTAAATTCTGGGGGTTCTATAGCACCTGAAATCTATACAACGCTTGTGGAAGGAGCCATGATTGGTTATACACCAAAGGGAATGCAATTGGCTCAAGAAACACTGGAAAACATGAATTCCAGGGGCTTTTTCTTGAACCCCAGATCAGGGAGTGAGCTTCTCCTTGCAGCTGCGGGTGAAAAGACTGGTGGTTATACAACTGCCAATTATATATGGGACCTCTTGCGAGCTCGAGAGATAACTCCTTTATTCCCTGCTGTGGATGCATATTACAAGGGATTGAAGAAACGTGAGATTCCAGAAGACGATGCTAGGCTTTTATTAGTTACTCGAATCCACGAAAATCTTCAAGCCAGATTTGGTGGTGACCGAGCATAA

Coding sequence (CDS)

ATGAAGAAGTTCTTCAGTTCTTTATCCCCATTCATTATTTTTAGCTTACACCTTCCTCGTTCTTCCATTTATGTTCAGGTCAAAGCCGCTCCCTTGTCCGTTTTCTTAGACAGCGTCGATCCTTTGCTGTTTCTACGGAAGAGTACAGAAAACGGAATTACGCTGATAATGTTTCCGAGTACAAAACTGTACTTCTCATTGACGGATGTGTATGACGATATGATGTTGGATGGAGTGCAGCCTACAATGGACGTTTTCCATTTACTGATATCTGGAACCATGAAAGGCGCTCGTTTCCAGCATGCTTTTTTTTTCAGGGATGAAATGAAGGCCATGGGTTTGATTCCTGATGTTAGTCTGTATAACATGCTGATCTCATTATGTGGTAAATGTAACAACTCTGAAGAGGCTGTCCGGATCTTAGATGAGATGAGGAGATATGAAGTGAAGCCAAATTCACAGACGTACATCTGTCTACTTAATGCTTGTGCAGCTGCTGGTAGATTAGATCGCGTGTATACGATTGTCAGAGATATGACTTCTGCTGGGCTTGGCTTAAACAAGTTCTGCTATGCTGGACTTATAGCTGCACATATGAACAAGAAACCTGTGGCAGATGATTTTGATACTAAAGTGGTTGAATTTGTTGAACGGTCAAAGGAATGGTTATCGGTAGATGCATCAAGTGTAACAGCTGAAAATTTTATGATGGGTGTTTCAGAAGAGGAATTGTACAATATTCCGACTGCTGAATATGTTCACAGACGTGGAGGATTTTTAAACAAACAATTGACTATTTATCATGTTGCTTTAAATGCTTGTGCAAATCTCAAGAATGTGAAGGTTATGGAGACCATAATGGATATGTTAAAGAAGGATGGAAAAACTCCCGACGTCTACATGATAATGCAAGTTATGAGGTGCTATCTACATTCTGGAGATATTGATCGTGGTCATAAAGCTTTTGAGGAGCACTTAAATTCTGGGGGTTCTATAGCACCTGAAATCTATACAACGCTTGTGGAAGGAGCCATGATTGGTTATACACCAAAGGGAATGCAATTGGCTCAAGAAACACTGGAAAACATGAATTCCAGGGGCTTTTTCTTGAACCCCAGATCAGGGAGTGAGCTTCTCCTTGCAGCTGCGGGTGAAAAGACTGGTGGTTATACAACTGCCAATTATATATGGGACCTCTTGCGAGCTCGAGAGATAACTCCTTTATTCCCTGCTGTGGATGCATATTACAAGGGATTGAAGAAACGTGAGATTCCAGAAGACGATGCTAGGCTTTTATTAGTTACTCGAATCCACGAAAATCTTCAAGCCAGATTTGGTGGTGACCGAGCATAA

Protein sequence

MKKFFSSLSPFIIFSLHLPRSSIYVQVKAAPLSVFLDSVDPLLFLRKSTENGITLIMFPSTKLYFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQETLENMNSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKREIPEDDARLLLVTRIHENLQARFGGDRA*

Homology

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BLAST of Chy4G081300 vs. ExPASy Swiss-Prot
Match: Q8VYR5 (Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g35850 PE=1 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 3.0e-145
Identity = 241/383 (62.92%), Postives = 304/383 (79.37%), Query Frame = 0


Query: 64  YFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNM 123
           ++ L DVYDDM LDGVQPT D+FH  + GTMKGAR   AFFFR+EMKAMG+ PDV+LYN 
Sbjct: 57  HYLLRDVYDDMKLDGVQPTADIFHSFVVGTMKGARLSDAFFFREEMKAMGIAPDVNLYNF 116

Query: 124 LISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAG 183
           LIS CGKC N +EA+R+ DEM+RY+VKPN QT++CLLNACA +G+LD VY IVRDMT+AG
Sbjct: 117 LISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAG 176

Query: 184 LGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEE 243
           +GLN+FCYAGLI AH+NK+P  D+  TK++EFVE+SK W ++D+S  +AE+ M  +SEEE
Sbjct: 177 VGLNQFCYAGLITAHLNKQPRPDNLSTKILEFVEQSKGWSAIDSSRKSAEDVMFSISEEE 236

Query: 244 LYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIM 303
           LYNIPTA+Y HR   FL + LT+YHVA +A A+LK+VK  E +++MLKKDGK  D Y ++
Sbjct: 237 LYNIPTADYSHRT-RFLQRNLTVYHVAFSALADLKDVKATEALLEMLKKDGKDTDTYCML 296

Query: 304 QVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQETLENM 363
           Q+MRCYLHS D + G K F++++++    A E+YTTL+EGAM GYT  GM++AQ+TL  M
Sbjct: 297 QIMRCYLHSQDFENGLKLFQDYMSADKIPAMELYTTLIEGAMTGYTDNGMKIAQDTLIQM 356

Query: 364 NSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKRE 423
           N R FFL+PR+GS LLL AAGEKTGGYT AN IWDL+ AR I P   AV+AYYKGLK+RE
Sbjct: 357 NERNFFLDPRTGSNLLLKAAGEKTGGYTVANMIWDLMLARNILPTLAAVEAYYKGLKERE 416

Query: 424 IPEDDARLLLVTRIHENLQARFG 447
           IPEDD RL+LVTR + NL+ R G
Sbjct: 417 IPEDDPRLMLVTRTYNNLRLREG 438

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BLAST of Chy4G081300 vs. ExPASy Swiss-Prot
Match: Q940A6 (Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g19440 PE=2 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 1.4e-14
Identity = 67/272 (24.63%), Postives = 109/272 (40.07%), Query Frame = 0


Query: 72  DDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKC 131
           D+M+  G++P    + +LI G     + + A  F D+ K  G++PDV  Y+++I  C K 
Sbjct: 577 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 636

Query: 132 NNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCY 191
             +EE     DEM    V+PN+  Y  L+ A   +GRL     +  DM   G+  N   Y
Sbjct: 637 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 696

Query: 192 AGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYNIPTAE 251
             LI        +    +   + F E   E L  +    TA     G   + +       
Sbjct: 697 TSLIKG----MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 756

Query: 252 YVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVMRCYLH 311
            +H +    NK    Y V +   A   NV     +++ +++ G  PD     + +  YL 
Sbjct: 757 EMHSKNVHPNK--ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 816

Query: 312 SGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEG 344
            G +    K  +E          E Y  ++EG
Sbjct: 817 QGGVLEAFKGSDE----------ENYAAIIEG 832

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BLAST of Chy4G081300 vs. ExPASy Swiss-Prot
Match: B8Y6I0 (Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=4577 GN=PPR10 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 1.2e-13
Identity = 75/355 (21.13%), Postives = 147/355 (41.41%), Query Frame = 0


Query: 55  LIMFPSTKLYFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGL 114
           L +F     Y     V  +M  +G QP    ++ L     +   F+ A    D M + GL
Sbjct: 287 LQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGL 346

Query: 115 IPDVSLYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYT 174
           +P+   YN +++  G     +EA+ + D+M++    PN  TY  +L       R   +  
Sbjct: 347 LPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLE 406

Query: 175 IVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAEN 234
           ++ +M+ +G   N+  +  ++A  +  K   +D+ T+V+E +      LS D  +     
Sbjct: 407 MLGEMSRSGCTPNRVTWNTMLA--VCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAA 466

Query: 235 FMMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDG 294
           +    S    + +    Y           +T Y+  LN  +   +    ++I+  ++  G
Sbjct: 467 YGRCGSRTNAFKM----YNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKG 526

Query: 295 KTPDVYMIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPE--IYTTLVEGAMIGYTPKG 354
             P+      +++CY   G++  G  A E  +   G++ P   I  TLV          G
Sbjct: 527 FKPNEQSYSLLLQCYAKGGNV-AGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDG 586

Query: 355 MQLAQETLENMNSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITP 408
           M+ A    + + +RG+  NP       + +   K G Y+ A  ++D ++   ++P
Sbjct: 587 META---FQEVKARGY--NPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSP 629

[Close]

BLAST of Chy4G081300 vs. ExPASy Swiss-Prot
Match: Q9FLL3 (Pentatricopeptide repeat-containing protein At5g41170, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g41170 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 6.0e-13
Identity = 86/342 (25.15%), Postives = 137/342 (40.06%), Query Frame = 0


Query: 74  MMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNN 133
           MM  G +P +  F  LI+G   G R + A    ++M  MG+ PDV +Y  +I    K  +
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192

Query: 134 SEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAG 193
              A+ + D+M  Y ++P+   Y  L+N    +GR     +++R MT   +         
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI--------- 252

Query: 194 LIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYNIPTAEYV 253
                   KP    F+  +  FV   KE   +DA  +  E   M ++     NI T  Y 
Sbjct: 253 --------KPDVITFNALIDAFV---KEGKFLDAEELYNEMIRMSIAP----NIFT--YT 312

Query: 254 HRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVMRCYLHSG 313
               GF           +  C     V     +  +++  G  PDV     ++  +    
Sbjct: 313 SLINGF----------CMEGC-----VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK 372

Query: 314 DIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQETLENMNSRGFFLNPR 373
            +D   K F E    G +     YTTL++G   G   K   +AQE   +M SRG   N R
Sbjct: 373 KVDDAMKIFYEMSQKGLTGNTITYTTLIQG--FGQVGK-PNVAQEVFSHMVSRGVPPNIR 428

Query: 374 SGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAY 416
           + + LL        G    A  I++ ++ RE+  + P +  Y
Sbjct: 433 TYNVLLHCLC--YNGKVKKALMIFEDMQKREMDGVAPNIWTY 428

[Close]

BLAST of Chy4G081300 vs. ExPASy Swiss-Prot
Match: Q0WMY5 (Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPR4 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.0e-12
Identity = 61/305 (20.00%), Postives = 127/305 (41.64%), Query Frame = 0


Query: 74  MMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNN 133
           M  +GV+  +  + ++I+G +K   + +AF   ++M   G+ PDV LYN +IS      N
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569

Query: 134 SEEAVRILDEMRRYEVKPNSQTYICLLNACAAAG-------------------------- 193
            + A++ + EM++   +P ++T++ +++  A +G                          
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629

Query: 194 ---------RLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVER 253
                    ++++   I+ +MT AG+  N+  Y  ++  + +       F+     F   
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE----YFTRL 689

Query: 254 SKEWLSVDASSVTAENFMMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLK 313
             E L VD    T E  +    +        A         + +   +Y++ ++  A   
Sbjct: 690 QNEGLDVDI--FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 749

Query: 314 NVKVMETIMDMLKKDGKTPDVYMIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYT 344
           +V     ++  +KK+G  PD++     +     +GD++R  +  EE    G     + YT
Sbjct: 750 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 808

[Close]

BLAST of Chy4G081300 vs. ExPASy TrEMBL
Match: A0A0A0LCH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G840460 PE=4 SV=1)

HSP 1 Score: 782.7 bits (2020), Expect = 8.2e-223
Identity = 384/387 (99.22%), Postives = 386/387 (99.74%), Query Frame = 0


Query: 64  YFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNM 123
           YFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNM
Sbjct: 56  YFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNM 115

Query: 124 LISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAG 183
           LISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAG
Sbjct: 116 LISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAG 175

Query: 184 LGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEE 243
           LGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEE
Sbjct: 176 LGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEE 235

Query: 244 LYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIM 303
           LYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIM
Sbjct: 236 LYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIM 295

Query: 304 QVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQETLENM 363
           QVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPE+YTTLVEGAMIGYTPKGMQLAQETLENM
Sbjct: 296 QVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPELYTTLVEGAMIGYTPKGMQLAQETLENM 355

Query: 364 NSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKRE 423
           NSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKRE
Sbjct: 356 NSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKRE 415

Query: 424 IPEDDARLLLVTRIHENLQARFGGDRA 451
           IPEDD RL+LVTRIHENLQARFGGDRA
Sbjct: 416 IPEDDPRLVLVTRIHENLQARFGGDRA 442

[Close]

BLAST of Chy4G081300 vs. ExPASy TrEMBL
Match: A0A5D3D5B2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold257G00370 PE=4 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 7.6e-213
Identity = 368/391 (94.12%), Postives = 380/391 (97.19%), Query Frame = 0


Query: 60  STKLYFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVS 119
           S + YFSL DVYDDMMLDGVQPTMDVFHLLI+GTMKGARFQHAFFFRDEMKAMGLIPDVS
Sbjct: 52  SQRRYFSLRDVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVS 111

Query: 120 LYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDM 179
           LYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDM
Sbjct: 112 LYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDM 171

Query: 180 TSAGLGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGV 239
           TSAGLGLNKFCYAGLIAAHMNKKPVADDF TKVVEFVERSKEWLSVDASSVTAEN MMGV
Sbjct: 172 TSAGLGLNKFCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGV 231

Query: 240 SEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDV 299
           SEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNV+VMETIMDMLKKDGKTPDV
Sbjct: 232 SEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDV 291

Query: 300 YMIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQET 359
           Y+IMQVMRCYLHSGDIDRGHKAFEEHLNSGGS+A E+Y+TLVEGAMIGYTPKGMQLAQET
Sbjct: 292 YIIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQET 351

Query: 360 LENMNSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGL 419
           LENMNSRGFFLN R GSELLLAAAGEKTGGYTTANYIWDLL+AR+ITP F AVDAYY+GL
Sbjct: 352 LENMNSRGFFLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGL 411

Query: 420 KKREIPEDDARLLLVTRIHENLQARFGGDRA 451
           K REIPEDDARLLLV+RIHENL+ARFGGDRA
Sbjct: 412 KDREIPEDDARLLLVSRIHENLRARFGGDRA 442

[Close]

BLAST of Chy4G081300 vs. ExPASy TrEMBL
Match: A0A1S3CMS3 (pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103502690 PE=4 SV=1)

HSP 1 Score: 749.6 bits (1934), Expect = 7.6e-213
Identity = 368/391 (94.12%), Postives = 380/391 (97.19%), Query Frame = 0


Query: 60  STKLYFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVS 119
           S + YFSL DVYDDMMLDGVQPTMDVFHLLI+GTMKGARFQHAFFFRDEMKAMGLIPDVS
Sbjct: 52  SQRRYFSLRDVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDEMKAMGLIPDVS 111

Query: 120 LYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDM 179
           LYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDM
Sbjct: 112 LYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDM 171

Query: 180 TSAGLGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGV 239
           TSAGLGLNKFCYAGLIAAHMNKKPVADDF TKVVEFVERSKEWLSVDASSVTAEN MMGV
Sbjct: 172 TSAGLGLNKFCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSVTAENVMMGV 231

Query: 240 SEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDV 299
           SEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNV+VMETIMDMLKKDGKTPDV
Sbjct: 232 SEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMDMLKKDGKTPDV 291

Query: 300 YMIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQET 359
           Y+IMQVMRCYLHSGDIDRGHKAFEEHLNSGGS+A E+Y+TLVEGAMIGYTPKGMQLAQET
Sbjct: 292 YIIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGYTPKGMQLAQET 351

Query: 360 LENMNSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGL 419
           LENMNSRGFFLN R GSELLLAAAGEKTGGYTTANYIWDLL+AR+ITP F AVDAYY+GL
Sbjct: 352 LENMNSRGFFLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPSFAAVDAYYRGL 411

Query: 420 KKREIPEDDARLLLVTRIHENLQARFGGDRA 451
           K REIPEDDARLLLV+RIHENL+ARFGGDRA
Sbjct: 412 KDREIPEDDARLLLVSRIHENLRARFGGDRA 442

[Close]

BLAST of Chy4G081300 vs. ExPASy TrEMBL
Match: A0A6J1EN55 (pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111435075 PE=4 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 8.5e-196
Identity = 338/384 (88.02%), Postives = 361/384 (94.01%), Query Frame = 0


Query: 64  YFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNM 123
           YF L DVYDDMMLDGVQPTMDVFH LI+G+MKGARFQ AFFFRDEMKAMGLIPDV+LYNM
Sbjct: 56  YFLLRDVYDDMMLDGVQPTMDVFHSLITGSMKGARFQDAFFFRDEMKAMGLIPDVTLYNM 115

Query: 124 LISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAG 183
           LISLCGKCNNSEEAVRILDEMRRYEVKP+SQTYICLLNACA AGRLDRVYTIVRDMT+AG
Sbjct: 116 LISLCGKCNNSEEAVRILDEMRRYEVKPHSQTYICLLNACAVAGRLDRVYTIVRDMTAAG 175

Query: 184 LGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEE 243
           LGLNKFCY GLIAAHMNKKPVADDF TKVVEFVERSKEWLSVDASS TAEN MMGVSEEE
Sbjct: 176 LGLNKFCYTGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSATAENVMMGVSEEE 235

Query: 244 LYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIM 303
           LYNIPTAEYVHRRGGFLN+QLTIYHVAL+ACANLKNV+VMETIMDMLKKDGKTPDV++++
Sbjct: 236 LYNIPTAEYVHRRGGFLNRQLTIYHVALHACANLKNVEVMETIMDMLKKDGKTPDVFIVI 295

Query: 304 QVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQETLENM 363
           QVMRCYLHSGDIDRG KAFEEHLNSGG  A E+Y TLVEGAMIGYTPKGMQLAQETL NM
Sbjct: 296 QVMRCYLHSGDIDRGLKAFEEHLNSGGLPAAELYATLVEGAMIGYTPKGMQLAQETLVNM 355

Query: 364 NSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKRE 423
           NSRGFFLNP+ GS+LLLAAAGEKTGGYTTANYIWDLL+AR+ITP FPAV+AYY GLK+RE
Sbjct: 356 NSRGFFLNPKLGSDLLLAAAGEKTGGYTTANYIWDLLQARKITPSFPAVEAYYNGLKERE 415

Query: 424 IPEDDARLLLVTRIHENLQARFGG 448
           IPE+D RLLLV+R + NL+ R GG
Sbjct: 416 IPEEDPRLLLVSRTYSNLRVRSGG 439

[Close]

BLAST of Chy4G081300 vs. ExPASy TrEMBL
Match: A0A6J1JMQ0 (pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111486622 PE=4 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 4.2e-195
Identity = 337/384 (87.76%), Postives = 360/384 (93.75%), Query Frame = 0


Query: 64  YFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNM 123
           YF L DVYDD+MLDGVQPTMDVFH LI+G+MKGARFQ AFFFRDEMKAMGLIPDV+LYNM
Sbjct: 56  YFLLRDVYDDLMLDGVQPTMDVFHSLITGSMKGARFQDAFFFRDEMKAMGLIPDVTLYNM 115

Query: 124 LISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAG 183
           LISLCGKCNNSEEAVRILDEMRRYEVKP+SQTYICLLNACA AGRLDRVYTIVRDMT+AG
Sbjct: 116 LISLCGKCNNSEEAVRILDEMRRYEVKPHSQTYICLLNACAVAGRLDRVYTIVRDMTAAG 175

Query: 184 LGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEE 243
           LGLNKFCY GLIAAHMNKKPVADDF TKVVEFVERSKEWLSVDASS TAEN MMGVSEEE
Sbjct: 176 LGLNKFCYTGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSATAENVMMGVSEEE 235

Query: 244 LYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIM 303
           LYNIPTAEYVHRRGGFLN+QLTIYHVAL+ACANLKNV+VMETIMDMLKKDGKTPDV++++
Sbjct: 236 LYNIPTAEYVHRRGGFLNRQLTIYHVALHACANLKNVEVMETIMDMLKKDGKTPDVFIVI 295

Query: 304 QVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQETLENM 363
           QVMRCYLHSGDIDRG KAFEEHLNSGG  A E+Y TLVEGAMIGYTPKGMQLAQETL NM
Sbjct: 296 QVMRCYLHSGDIDRGLKAFEEHLNSGGPPAAELYATLVEGAMIGYTPKGMQLAQETLVNM 355

Query: 364 NSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKRE 423
           NSRGFFLNP+ GS+LLLAAAGEKTGGYTTANYIWDLL+AR+ITP  PAV+AYY GLK+RE
Sbjct: 356 NSRGFFLNPKLGSDLLLAAAGEKTGGYTTANYIWDLLQARKITPSSPAVEAYYNGLKERE 415

Query: 424 IPEDDARLLLVTRIHENLQARFGG 448
           IPEDD RLLLV+R + NL+ R GG
Sbjct: 416 IPEDDPRLLLVSRTYNNLRVRSGG 439

[Close]

BLAST of Chy4G081300 vs. NCBI nr
Match: KGN59834.2 (hypothetical protein Csa_001378 [Cucumis sativus])

HSP 1 Score: 846 bits (2185), Expect = 3.71e-302
Identity = 420/425 (98.82%), Postives = 423/425 (99.53%), Query Frame = 0


Query: 26  QVKAAPLSVFLDSVDPLLFLRKSTENGITLIMFPSTKLYFSLTDVYDDMMLDGVQPTMDV 85
           QVKAAPLSVFLDSVDPLLFLRK+TENGITLIM PSTKLYFSLTDVYDDMMLDGVQPTMDV
Sbjct: 430 QVKAAPLSVFLDSVDPLLFLRKNTENGITLIMLPSTKLYFSLTDVYDDMMLDGVQPTMDV 489

Query: 86  FHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMR 145
           FHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMR
Sbjct: 490 FHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMR 549

Query: 146 RYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVA 205
           RYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVA
Sbjct: 550 RYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVA 609

Query: 206 DDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYNIPTAEYVHRRGGFLNKQLT 265
           DDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYNIPTAEYVHRRGGFLNKQLT
Sbjct: 610 DDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYNIPTAEYVHRRGGFLNKQLT 669

Query: 266 IYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVMRCYLHSGDIDRGHKAFEEH 325
           IYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVMRCYLHSGDIDRGHKAFEEH
Sbjct: 670 IYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVMRCYLHSGDIDRGHKAFEEH 729

Query: 326 LNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQETLENMNSRGFFLNPRSGSELLLAAAGE 385
           LNSGGSIAPE+YTTLVEGAMIGYTPKGMQLAQETLENMNSRGFFLNPRSGSELLLAAAGE
Sbjct: 730 LNSGGSIAPELYTTLVEGAMIGYTPKGMQLAQETLENMNSRGFFLNPRSGSELLLAAAGE 789

Query: 386 KTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKREIPEDDARLLLVTRIHENLQARF 445
           KTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKREIPEDD RL+LVTRIHENLQARF
Sbjct: 790 KTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKREIPEDDPRLVLVTRIHENLQARF 849

Query: 446 GGDRA 450
           GGDRA
Sbjct: 850 GGDRA 854

[Close]

BLAST of Chy4G081300 vs. NCBI nr
Match: XP_004141120.1 (pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Cucumis sativus])

HSP 1 Score: 778 bits (2010), Expect = 5.24e-282
Identity = 384/387 (99.22%), Postives = 386/387 (99.74%), Query Frame = 0


Query: 64  YFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNM 123
           YFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNM
Sbjct: 56  YFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNM 115

Query: 124 LISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAG 183
           LISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAG
Sbjct: 116 LISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAG 175

Query: 184 LGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEE 243
           LGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEE
Sbjct: 176 LGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEE 235

Query: 244 LYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIM 303
           LYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIM
Sbjct: 236 LYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIM 295

Query: 304 QVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQETLENM 363
           QVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPE+YTTLVEGAMIGYTPKGMQLAQETLENM
Sbjct: 296 QVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPELYTTLVEGAMIGYTPKGMQLAQETLENM 355

Query: 364 NSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKRE 423
           NSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKRE
Sbjct: 356 NSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKRE 415

Query: 424 IPEDDARLLLVTRIHENLQARFGGDRA 450
           IPEDD RL+LVTRIHENLQARFGGDRA
Sbjct: 416 IPEDDPRLVLVTRIHENLQARFGGDRA 442

[Close]

BLAST of Chy4G081300 vs. NCBI nr
Match: XP_008464942.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Cucumis melo] >KAA0057227.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK18735.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 745 bits (1924), Expect = 6.57e-269
Identity = 369/402 (91.79%), Postives = 383/402 (95.27%), Query Frame = 0


Query: 49  TENGITLIMFPSTKLYFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDE 108
           +E    +    S + YFSL DVYDDMMLDGVQPTMDVFHLLI+GTMKGARFQHAFFFRDE
Sbjct: 41  SEYKTVIASLTSQRRYFSLRDVYDDMMLDGVQPTMDVFHLLITGTMKGARFQHAFFFRDE 100

Query: 109 MKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGR 168
           MKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGR
Sbjct: 101 MKAMGLIPDVSLYNMLISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGR 160

Query: 169 LDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDAS 228
           LDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDF TKVVEFVERSKEWLSVDAS
Sbjct: 161 LDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDAS 220

Query: 229 SVTAENFMMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMD 288
           SVTAEN MMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNV+VMETIMD
Sbjct: 221 SVTAENVMMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVEVMETIMD 280

Query: 289 MLKKDGKTPDVYMIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGY 348
           MLKKDGKTPDVY+IMQVMRCYLHSGDIDRGHKAFEEHLNSGGS+A E+Y+TLVEGAMIGY
Sbjct: 281 MLKKDGKTPDVYIIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSVAAELYSTLVEGAMIGY 340

Query: 349 TPKGMQLAQETLENMNSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPL 408
           TPKGMQLAQETLENMNSRGFFLN R GSELLLAAAGEKTGGYTTANYIWDLL+AR+ITP 
Sbjct: 341 TPKGMQLAQETLENMNSRGFFLNARLGSELLLAAAGEKTGGYTTANYIWDLLQARQITPS 400

Query: 409 FPAVDAYYKGLKKREIPEDDARLLLVTRIHENLQARFGGDRA 450
           F AVDAYY+GLK REIPEDDARLLLV+RIHENL+ARFGGDRA
Sbjct: 401 FAAVDAYYRGLKDREIPEDDARLLLVSRIHENLRARFGGDRA 442

[Close]

BLAST of Chy4G081300 vs. NCBI nr
Match: KAG6588934.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 691 bits (1783), Expect = 2.16e-247
Identity = 339/385 (88.05%), Postives = 362/385 (94.03%), Query Frame = 0


Query: 64  YFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNM 123
           YF L DVYDDMMLDGVQPTMDVFH LI+G+MKGARFQ AFFFRDEMKAMGLIPDV+LYNM
Sbjct: 56  YFLLRDVYDDMMLDGVQPTMDVFHSLITGSMKGARFQDAFFFRDEMKAMGLIPDVTLYNM 115

Query: 124 LISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAG 183
           LISLCGKCNNSEEAVRILDEMRRYEVKP+SQTYICLLNACA AGRLDRVYTIVRDMT+AG
Sbjct: 116 LISLCGKCNNSEEAVRILDEMRRYEVKPHSQTYICLLNACAVAGRLDRVYTIVRDMTAAG 175

Query: 184 LGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEE 243
           LGLNKFCY GLIAAHMNKKPVADDF TKVVEFVERSKEWLSVDASS TAEN MMGVSEEE
Sbjct: 176 LGLNKFCYTGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSATAENVMMGVSEEE 235

Query: 244 LYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIM 303
           LYNIPTAEYVHRRGGFLN+QLTIYHVAL+ACANLKNV+VMETIMDMLKKDGKTPDV++++
Sbjct: 236 LYNIPTAEYVHRRGGFLNRQLTIYHVALHACANLKNVEVMETIMDMLKKDGKTPDVFIVI 295

Query: 304 QVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQETLENM 363
           QVMRCYLHSGDIDRG KAFEEHLNSGG  A E+YTTLVEGAMIGYTPKGMQLAQETL NM
Sbjct: 296 QVMRCYLHSGDIDRGLKAFEEHLNSGGLPAAELYTTLVEGAMIGYTPKGMQLAQETLVNM 355

Query: 364 NSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKRE 423
           NSRGFFLNP+ GS+LLLAAAGEKTGGYTTANYIWDLL+AR+ITP FPAV+AYY GLK+RE
Sbjct: 356 NSRGFFLNPKLGSDLLLAAAGEKTGGYTTANYIWDLLQARKITPSFPAVEAYYNGLKERE 415

Query: 424 IPEDDARLLLVTRIHENLQARFGGD 448
           IPE+D RLLLV+R + NL+ R GG 
Sbjct: 416 IPEEDPRLLLVSRTYSNLRVRSGGS 440

[Close]

BLAST of Chy4G081300 vs. NCBI nr
Match: XP_022928173.1 (pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Cucurbita moschata])

HSP 1 Score: 689 bits (1778), Expect = 1.24e-246
Identity = 338/385 (87.79%), Postives = 361/385 (93.77%), Query Frame = 0


Query: 64  YFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNM 123
           YF L DVYDDMMLDGVQPTMDVFH LI+G+MKGARFQ AFFFRDEMKAMGLIPDV+LYNM
Sbjct: 56  YFLLRDVYDDMMLDGVQPTMDVFHSLITGSMKGARFQDAFFFRDEMKAMGLIPDVTLYNM 115

Query: 124 LISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAG 183
           LISLCGKCNNSEEAVRILDEMRRYEVKP+SQTYICLLNACA AGRLDRVYTIVRDMT+AG
Sbjct: 116 LISLCGKCNNSEEAVRILDEMRRYEVKPHSQTYICLLNACAVAGRLDRVYTIVRDMTAAG 175

Query: 184 LGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEE 243
           LGLNKFCY GLIAAHMNKKPVADDF TKVVEFVERSKEWLSVDASS TAEN MMGVSEEE
Sbjct: 176 LGLNKFCYTGLIAAHMNKKPVADDFATKVVEFVERSKEWLSVDASSATAENVMMGVSEEE 235

Query: 244 LYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIM 303
           LYNIPTAEYVHRRGGFLN+QLTIYHVAL+ACANLKNV+VMETIMDMLKKDGKTPDV++++
Sbjct: 236 LYNIPTAEYVHRRGGFLNRQLTIYHVALHACANLKNVEVMETIMDMLKKDGKTPDVFIVI 295

Query: 304 QVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQETLENM 363
           QVMRCYLHSGDIDRG KAFEEHLNSGG  A E+Y TLVEGAMIGYTPKGMQLAQETL NM
Sbjct: 296 QVMRCYLHSGDIDRGLKAFEEHLNSGGLPAAELYATLVEGAMIGYTPKGMQLAQETLVNM 355

Query: 364 NSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKRE 423
           NSRGFFLNP+ GS+LLLAAAGEKTGGYTTANYIWDLL+AR+ITP FPAV+AYY GLK+RE
Sbjct: 356 NSRGFFLNPKLGSDLLLAAAGEKTGGYTTANYIWDLLQARKITPSFPAVEAYYNGLKERE 415

Query: 424 IPEDDARLLLVTRIHENLQARFGGD 448
           IPE+D RLLLV+R + NL+ R GG 
Sbjct: 416 IPEEDPRLLLVSRTYSNLRVRSGGS 440

[Close]

BLAST of Chy4G081300 vs. TAIR 10
Match: AT4G35850.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 516.5 bits (1329), Expect = 2.1e-146
Identity = 241/383 (62.92%), Postives = 304/383 (79.37%), Query Frame = 0


Query: 64  YFSLTDVYDDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNM 123
           ++ L DVYDDM LDGVQPT D+FH  + GTMKGAR   AFFFR+EMKAMG+ PDV+LYN 
Sbjct: 57  HYLLRDVYDDMKLDGVQPTADIFHSFVVGTMKGARLSDAFFFREEMKAMGIAPDVNLYNF 116

Query: 124 LISLCGKCNNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAG 183
           LIS CGKC N +EA+R+ DEM+RY+VKPN QT++CLLNACA +G+LD VY IVRDMT+AG
Sbjct: 117 LISTCGKCKNGKEAIRVYDEMKRYDVKPNGQTFVCLLNACAVSGQLDLVYAIVRDMTAAG 176

Query: 184 LGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEE 243
           +GLN+FCYAGLI AH+NK+P  D+  TK++EFVE+SK W ++D+S  +AE+ M  +SEEE
Sbjct: 177 VGLNQFCYAGLITAHLNKQPRPDNLSTKILEFVEQSKGWSAIDSSRKSAEDVMFSISEEE 236

Query: 244 LYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIM 303
           LYNIPTA+Y HR   FL + LT+YHVA +A A+LK+VK  E +++MLKKDGK  D Y ++
Sbjct: 237 LYNIPTADYSHRT-RFLQRNLTVYHVAFSALADLKDVKATEALLEMLKKDGKDTDTYCML 296

Query: 304 QVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQETLENM 363
           Q+MRCYLHS D + G K F++++++    A E+YTTL+EGAM GYT  GM++AQ+TL  M
Sbjct: 297 QIMRCYLHSQDFENGLKLFQDYMSADKIPAMELYTTLIEGAMTGYTDNGMKIAQDTLIQM 356

Query: 364 NSRGFFLNPRSGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAYYKGLKKRE 423
           N R FFL+PR+GS LLL AAGEKTGGYT AN IWDL+ AR I P   AV+AYYKGLK+RE
Sbjct: 357 NERNFFLDPRTGSNLLLKAAGEKTGGYTVANMIWDLMLARNILPTLAAVEAYYKGLKERE 416

Query: 424 IPEDDARLLLVTRIHENLQARFG 447
           IPEDD RL+LVTR + NL+ R G
Sbjct: 417 IPEDDPRLMLVTRTYNNLRLREG 438

[Close]

BLAST of Chy4G081300 vs. TAIR 10
Match: AT4G19440.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 1.0e-15
Identity = 67/272 (24.63%), Postives = 109/272 (40.07%), Query Frame = 0


Query: 72  DDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKC 131
           D+M+  G++P    + +LI G     + + A  F D+ K  G++PDV  Y+++I  C K 
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623

Query: 132 NNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCY 191
             +EE     DEM    V+PN+  Y  L+ A   +GRL     +  DM   G+  N   Y
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683

Query: 192 AGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYNIPTAE 251
             LI        +    +   + F E   E L  +    TA     G   + +       
Sbjct: 684 TSLIKG----MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 743

Query: 252 YVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVMRCYLH 311
            +H +    NK    Y V +   A   NV     +++ +++ G  PD     + +  YL 
Sbjct: 744 EMHSKNVHPNK--ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 803

Query: 312 SGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEG 344
            G +    K  +E          E Y  ++EG
Sbjct: 804 QGGVLEAFKGSDE----------ENYAAIIEG 819

[Close]

BLAST of Chy4G081300 vs. TAIR 10
Match: AT4G19440.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 1.0e-15
Identity = 67/272 (24.63%), Postives = 109/272 (40.07%), Query Frame = 0


Query: 72  DDMMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKC 131
           D+M+  G++P    + +LI G     + + A  F D+ K  G++PDV  Y+++I  C K 
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623

Query: 132 NNSEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCY 191
             +EE     DEM    V+PN+  Y  L+ A   +GRL     +  DM   G+  N   Y
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683

Query: 192 AGLIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYNIPTAE 251
             LI        +    +   + F E   E L  +    TA     G   + +       
Sbjct: 684 TSLIKG----MSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 743

Query: 252 YVHRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVMRCYLH 311
            +H +    NK    Y V +   A   NV     +++ +++ G  PD     + +  YL 
Sbjct: 744 EMHSKNVHPNK--ITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 803

Query: 312 SGDIDRGHKAFEEHLNSGGSIAPEIYTTLVEG 344
            G +    K  +E          E Y  ++EG
Sbjct: 804 QGGVLEAFKGSDE----------ENYAAIIEG 819

[Close]

BLAST of Chy4G081300 vs. TAIR 10
Match: AT5G41170.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 4.2e-14
Identity = 86/342 (25.15%), Postives = 137/342 (40.06%), Query Frame = 0


Query: 74  MMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNN 133
           MM  G +P +  F  LI+G   G R + A    ++M  MG+ PDV +Y  +I    K  +
Sbjct: 133 MMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGH 192

Query: 134 SEEAVRILDEMRRYEVKPNSQTYICLLNACAAAGRLDRVYTIVRDMTSAGLGLNKFCYAG 193
              A+ + D+M  Y ++P+   Y  L+N    +GR     +++R MT   +         
Sbjct: 193 VNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI--------- 252

Query: 194 LIAAHMNKKPVADDFDTKVVEFVERSKEWLSVDASSVTAENFMMGVSEEELYNIPTAEYV 253
                   KP    F+  +  FV   KE   +DA  +  E   M ++     NI T  Y 
Sbjct: 253 --------KPDVITFNALIDAFV---KEGKFLDAEELYNEMIRMSIAP----NIFT--YT 312

Query: 254 HRRGGFLNKQLTIYHVALNACANLKNVKVMETIMDMLKKDGKTPDVYMIMQVMRCYLHSG 313
               GF           +  C     V     +  +++  G  PDV     ++  +    
Sbjct: 313 SLINGF----------CMEGC-----VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK 372

Query: 314 DIDRGHKAFEEHLNSGGSIAPEIYTTLVEGAMIGYTPKGMQLAQETLENMNSRGFFLNPR 373
            +D   K F E    G +     YTTL++G   G   K   +AQE   +M SRG   N R
Sbjct: 373 KVDDAMKIFYEMSQKGLTGNTITYTTLIQG--FGQVGK-PNVAQEVFSHMVSRGVPPNIR 428

Query: 374 SGSELLLAAAGEKTGGYTTANYIWDLLRAREITPLFPAVDAY 416
           + + LL        G    A  I++ ++ RE+  + P +  Y
Sbjct: 433 TYNVLLHCLC--YNGKVKKALMIFEDMQKREMDGVAPNIWTY 428

[Close]

BLAST of Chy4G081300 vs. TAIR 10
Match: AT5G04810.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 76.3 bits (186), Expect = 7.2e-14
Identity = 61/305 (20.00%), Postives = 127/305 (41.64%), Query Frame = 0


Query: 74  MMLDGVQPTMDVFHLLISGTMKGARFQHAFFFRDEMKAMGLIPDVSLYNMLISLCGKCNN 133
           M  +GV+  +  + ++I+G +K   + +AF   ++M   G+ PDV LYN +IS      N
Sbjct: 510 MKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGN 569

Query: 134 SEEAVRILDEMRRYEVKPNSQTYICLLNACAAAG-------------------------- 193
            + A++ + EM++   +P ++T++ +++  A +G                          
Sbjct: 570 MDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNG 629

Query: 194 ---------RLDRVYTIVRDMTSAGLGLNKFCYAGLIAAHMNKKPVADDFDTKVVEFVER 253
                    ++++   I+ +MT AG+  N+  Y  ++  + +       F+     F   
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE----YFTRL 689

Query: 254 SKEWLSVDASSVTAENFMMGVSEEELYNIPTAEYVHRRGGFLNKQLTIYHVALNACANLK 313
             E L VD    T E  +    +        A         + +   +Y++ ++  A   
Sbjct: 690 QNEGLDVDI--FTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 749

Query: 314 NVKVMETIMDMLKKDGKTPDVYMIMQVMRCYLHSGDIDRGHKAFEEHLNSGGSIAPEIYT 344
           +V     ++  +KK+G  PD++     +     +GD++R  +  EE    G     + YT
Sbjct: 750 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 808

The following BLAST results are available for this feature:

BLAST of Chy4G081300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYR5	3.0e-145	62.92	Pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Arabidop...	[more]
Q940A6	1.4e-14	24.63	Pentatricopeptide repeat-containing protein At4g19440, chloroplastic OS=Arabidop...	[more]
B8Y6I0	1.2e-13	21.13	Pentatricopeptide repeat-containing protein 10, chloroplastic OS=Zea mays OX=457...	[more]
Q9FLL3	6.0e-13	25.15	Pentatricopeptide repeat-containing protein At5g41170, mitochondrial OS=Arabidop...	[more]
Q0WMY5	1.0e-12	20.00	Pentatricopeptide repeat-containing protein At5g04810, chloroplastic OS=Arabidop...	[more]

BLAST of Chy4G081300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCH8	8.2e-223	99.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G840460 PE=4 SV=1	[more]
A0A5D3D5B2	7.6e-213	94.12	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CMS3	7.6e-213	94.12	pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Cucumis ...	[more]
A0A6J1EN55	8.5e-196	88.02	pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Cucurbit...	[more]
A0A6J1JMQ0	4.2e-195	87.76	pentatricopeptide repeat-containing protein At4g35850, mitochondrial OS=Cucurbit...	[more]

BLAST of Chy4G081300 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN59834.2	3.71e-302	98.82	hypothetical protein Csa_001378 [Cucumis sativus]	[more]
XP_004141120.1	5.24e-282	99.22	pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Cucumis sa...	[more]
XP_008464942.1	6.57e-269	91.79	PREDICTED: pentatricopeptide repeat-containing protein At4g35850, mitochondrial ...	[more]
KAG6588934.1	2.16e-247	88.05	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
XP_022928173.1	1.24e-246	87.79	pentatricopeptide repeat-containing protein At4g35850, mitochondrial [Cucurbita ...	[more]

BLAST of Chy4G081300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G35850.1	2.1e-146	62.92	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G19440.1	1.0e-15	24.63	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G19440.2	1.0e-15	24.63	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G41170.1	4.2e-14	25.15	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT5G04810.1	7.2e-14	20.00	pentatricopeptide (PPR) repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 116..164 e-value: 3.2E-13 score: 49.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 120..152 e-value: 4.5E-8 score: 30.8 coord: 155..186 e-value: 7.8E-4 score: 17.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 152..186 score: 9.437737
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 117..151 score: 12.002681
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 64..245 e-value: 1.9E-31 score: 111.6 coord: 251..441 e-value: 4.7E-11 score: 44.6
None	No IPR available	PANTHER	PTHR47801	OS05G0145600 PROTEIN	coord: 62..448

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G081300.1	Chy4G081300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015276	ligand-gated ion channel activity
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0038023	signaling receptor activity