Chy4G080340 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G080340
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Calcium-binding EF-hand
Location	chrH04: 19738537 .. 19740937 (-)
RNA-Seq Expression	Chy4G080340
Synteny	Chy4G080340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAGGCGCACCAAGGAATGGGGCGGGACACGGTTGCTTTGCTTGTAGGCGTGCCTTCGAATATATTCGCTGCTGCACAACACTGCCTACGCCCCCAAAGCTCCGCACCATGTCCTTATTCTACTTCTCACACACATTTTTACAAACATGCGGTGTCCAATTTTTCAATTCCCAGTTTTTAATTTATTGTCAACAGTTTATAATTAAAAATGGTTTGATTATGTGTAGTTCATGTGAGAGGAAGTAGAGTTGTAAACTTGTTTGTGAAGTAAACTATAGCATAAAGAGTTTATAAAATTGATGTTTTTAAGTTGGGTAACTCACCAACTTTATTGAACTAAACAATGAGTGAAAGTTCATAAATTCACCCTCCTTAATTTTCTACCTTTCAACTCTTTAGCCTAAATGTGTCTTATTCGTAAAAATTGGGATGAGAAGTTATTTTTAAATGATAATTATTTTTTAAATATTTACAAATATAACAATATTGTGATAGATCAAGATAGTAGGGTTGGAAACATGCAAAGTGAAGATGGGGACAATCCCCGTTCTCATGGGGATTTATAATCTCCATCCTTGCTCCCTTCTCCTTTTCGGAAAATCGGGTCAGATTCGGGTATTCCCCACTCAAAGATTCAATCTTGCAGAGAAATTTTTTTCATTTTTTTCATTTTTTAAATCAATAAAATTTTAGTACCTCCACGTGACATGAGCATGAAAGGTGTTCAAGAATAAGTTTTCTTTTTATAATGGTTAAAATATTTATTTTGGCTTTTTGACACCATATTGTAGGGTGGATTTCGAAAGATGTCCCTCCAAGTCGTACATAGGACTTTCATCGAATATGGCTTTTCACAAAATTCTATTTGTATCTATGAGATCGAGTATGGAGTTATGTTTACTGACTATAAATTGAGTATCCGTTTCTTTCCCTTTTATGCTAAGATTGGAAATCATATATTTTACATATTCATATGATTGAGTCCTTAGGTTTTCGAAATAGTGTAAAAAAAGGTGTTCAAATCATTACTATTTGACTCGGACCTGTTCTAAAAAAGTCGAGACATTTTGAATTGTTTATGGACAAAGTCAAGGAAAACCTCTCAAATTATTTCAATATTCCTTGGACATATAATAGTTCCGAATTGAAACACTTTAATTCCCATACGAAACTTTCGTTATTGGGTTAGTTATACACTTTACATGTTTCTAGCAAATCACATGTTTTTGAAGTTGTAATATATATTTTAATAATATTGAAAATTTGGGTTTGATTCAACACAAATTTTAAAAAACGTAACTCGAACCCAATCTAACTCGAAAAAACATTAAAAAAAAAAATTTGAATCCAATCCAGCTCTAACAATTTGAATTGGATAGTTGTTCAATTGGTGTCAAACACTCTCCATTCATAAGTTTTTTCTCGATTCATCTTTCCATGAATTGCTGAAAATGAAAATAAGTTCATAAAAATTCAAGATCTAATAAATCAAATAATTCAAAATTACTTTTTAAATTAGAGTTTTTGACTCCCGAATATCCAATTGATTAATTAATTCTTTATAACGCATTTTATTTTTCTTTAAGTTTAGGGACAAATTAAAACTATTACTCAAGTTCTAAAAAAGGTTGGATATAAAAGATGATGGACCCAATAGATAGATTCTTTGTACTTTGTCCAATAAAAGAAAAACGACCCGGCCCGGCCCGGATATTTATTAAAAAAAAAACACGTGAGCCGATAGTATTATATTTTTAATTGAAAAGAAAAAAAAATGGAAGAAAAGAAGAGAATTGGAGCGGAATTTTCGTTTCATCACAAGTCGCACCCGGTCCCCTCTCTATAAATACAAAAGCAAAATATAAACGTAACCAACCCATTTCAAACGTTTCTCTCACCACCGACTCACCACCGCACATACACCGACTCTCACACTACAGACACATAATCAACCCCCCCACACAGATATGGCGGTGGTCGTTCTCGACGGATCCACGGTGAGGAATTTCGTCAACGACGAATCTCACTTCAACAAGAGTATTGACGACGCCTTCGCTTCTCTTGATCTCAACAACGACGGCGTTCTCTCCCGATCCGAGCTCCGCAAGGCCTTCGAGACCCTCCGCCTAATCGAGACTCACTTCGGCGTCGACGTCGCTACTACCCCCGAACAACTCACCCAACTCTACGATTCCATCTTCGAGCAGTTTGATTGTGATAAAAGCGGTACTGTTGATGCCGAAGAGTTTCGTAAGGAGATGAAGAACATCTTGCTCGCTATCGCTGATGGATTAGGCTCCTCTCCCATTCAGATGGCGCTTGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCGGATCTGGAGGCTTCCAAACTCCGCCAATCGTCTACCTGA

mRNA sequence

ATGGAAAAGGCGCACCAAGGAATGGGGCGGGACACGGTTGCTTTGCTTGTAGGCGTGCCTTCGAATATATTCGCTGCTGCACAACACTGCCTACGCCCCCAAAGCTCCGCACCATATATGGCGGTGGTCGTTCTCGACGGATCCACGGTGAGGAATTTCGTCAACGACGAATCTCACTTCAACAAGAGTATTGACGACGCCTTCGCTTCTCTTGATCTCAACAACGACGGCGTTCTCTCCCGATCCGAGCTCCGCAAGGCCTTCGAGACCCTCCGCCTAATCGAGACTCACTTCGGCGTCGACGTCGCTACTACCCCCGAACAACTCACCCAACTCTACGATTCCATCTTCGAGCAGTTTGATTGTGATAAAAGCGGTACTGTTGATGCCGAAGAGTTTCGTAAGGAGATGAAGAACATCTTGCTCGCTATCGCTGATGGATTAGGCTCCTCTCCCATTCAGATGGCGCTTGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCGGATCTGGAGGCTTCCAAACTCCGCCAATCGTCTACCTGA

Coding sequence (CDS)

ATGGAAAAGGCGCACCAAGGAATGGGGCGGGACACGGTTGCTTTGCTTGTAGGCGTGCCTTCGAATATATTCGCTGCTGCACAACACTGCCTACGCCCCCAAAGCTCCGCACCATATATGGCGGTGGTCGTTCTCGACGGATCCACGGTGAGGAATTTCGTCAACGACGAATCTCACTTCAACAAGAGTATTGACGACGCCTTCGCTTCTCTTGATCTCAACAACGACGGCGTTCTCTCCCGATCCGAGCTCCGCAAGGCCTTCGAGACCCTCCGCCTAATCGAGACTCACTTCGGCGTCGACGTCGCTACTACCCCCGAACAACTCACCCAACTCTACGATTCCATCTTCGAGCAGTTTGATTGTGATAAAAGCGGTACTGTTGATGCCGAAGAGTTTCGTAAGGAGATGAAGAACATCTTGCTCGCTATCGCTGATGGATTAGGCTCCTCTCCCATTCAGATGGCGCTTGATGACGGCGATCAGAGTTTCCTCAAGCAAGCCGCGGATCTGGAGGCTTCCAAACTCCGCCAATCGTCTACCTGA

Protein sequence

MEKAHQGMGRDTVALLVGVPSNIFAAAQHCLRPQSSAPYMAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALDDGDQSFLKQAADLEASKLRQSST*

Homology

[Close]

BLAST of Chy4G080340 vs. ExPASy TrEMBL
Match: A0A0A0L9X6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.0e-70
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 40  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 99
           MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 100 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALDD 159
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFR EMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 160 GDQSFLKQAADLEASKLRQSST 182
           GDQSFLKQAADLEASKLRQSST
Sbjct: 121 GDQSFLKQAADLEASKLRQSST 142

[Close]

BLAST of Chy4G080340 vs. ExPASy TrEMBL
Match: A0A5A7UE76 (Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold148G00320 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.1e-68
Identity = 137/142 (96.48%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 40  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 99
           MAVVV+DGSTVRNFVNDE HFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 100 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALDD 159
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFR EMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 160 GDQSFLKQAADLEASKLRQSST 182
           GD+SFLKQAADLEASKL QSST
Sbjct: 121 GDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of Chy4G080340 vs. ExPASy TrEMBL
Match: A0A1S3CGR2 (uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.1e-68
Identity = 137/142 (96.48%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 40  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 99
           MAVVV+DGSTVRNFVNDE HFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 100 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALDD 159
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFR EMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 160 GDQSFLKQAADLEASKLRQSST 182
           GD+SFLKQAADLEASKL QSST
Sbjct: 121 GDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of Chy4G080340 vs. ExPASy TrEMBL
Match: A0A6J1J7W5 (uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.8e-65
Identity = 131/141 (92.91%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 40  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 99
           MAVVV+DGSTVRNFVNDESHF KS+D+AFA+LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 100 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALDD 159
           VDV T PE+LTQLYDSIFEQFDCDKSGTVDAEEFR EMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 160 GDQSFLKQAADLEASKLRQSS 181
           GDQSFLKQAADLEASKL QSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Chy4G080340 vs. ExPASy TrEMBL
Match: A0A6J1F6Q4 (uncharacterized protein LOC111441377 OS=Cucurbita moschata OX=3662 GN=LOC111441377 PE=4 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 8.2e-65
Identity = 130/141 (92.20%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 40  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 99
           MAVVV+DGSTVRNFVNDESHF KS+D+AFA+LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 100 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALDD 159
           VDV T PE+LTQLYDSIFE+FDCDKSGTVDAEEFR EMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEKFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 160 GDQSFLKQAADLEASKLRQSS 181
           GDQSFLKQAADLEASKL QSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Chy4G080340 vs. NCBI nr
Match: XP_004153292.1 (uncharacterized protein LOC101213961 [Cucumis sativus])

HSP 1 Score: 272 bits (696), Expect = 3.40e-91
Identity = 141/142 (99.30%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 40  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 99
           MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 100 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALDD 159
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFR EMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 160 GDQSFLKQAADLEASKLRQSST 181
           GDQSFLKQAADLEASKLRQSST
Sbjct: 121 GDQSFLKQAADLEASKLRQSST 142

[Close]

BLAST of Chy4G080340 vs. NCBI nr
Match: KAE8650949.1 (hypothetical protein Csa_002692 [Cucumis sativus])

HSP 1 Score: 274 bits (701), Expect = 5.04e-91
Identity = 143/153 (93.46%), Postives = 146/153 (95.42%), Query Frame = 0


Query: 29  HCLRPQSSAPYMAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAF 88
           H + P +   +MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAF
Sbjct: 56  HIINPPT---HMAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAF 115

Query: 89  ETLRLIETHFGVDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGL 148
           ETLRLIETHFGVDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFR EMKNILLAIADGL
Sbjct: 116 ETLRLIETHFGVDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGL 175

Query: 149 GSSPIQMALDDGDQSFLKQAADLEASKLRQSST 181
           GSSPIQMALDDGDQSFLKQAADLEASKLRQSST
Sbjct: 176 GSSPIQMALDDGDQSFLKQAADLEASKLRQSST 205

[Close]

BLAST of Chy4G080340 vs. NCBI nr
Match: XP_008461751.1 (PREDICTED: uncharacterized protein LOC103500282 [Cucumis melo] >KAA0052807.1 Calcium-binding EF-hand [Cucumis melo var. makuwa] >TYK04161.1 Calcium-binding EF-hand [Cucumis melo var. makuwa])

HSP 1 Score: 265 bits (678), Expect = 1.88e-88
Identity = 137/142 (96.48%), Postives = 139/142 (97.89%), Query Frame = 0


Query: 40  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 99
           MAVVV+DGSTVRNFVNDE HFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDEPHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 100 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALDD 159
           VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFR EMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 160 GDQSFLKQAADLEASKLRQSST 181
           GD+SFLKQAADLEASKL QSST
Sbjct: 121 GDRSFLKQAADLEASKLGQSST 142

[Close]

BLAST of Chy4G080340 vs. NCBI nr
Match: XP_038905172.1 (uncharacterized protein LOC120091281 [Benincasa hispida])

HSP 1 Score: 261 bits (668), Expect = 6.28e-87
Identity = 134/142 (94.37%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 40  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 99
           MAVVV+DGSTVRNFVNDESHF KSID+AFA+LDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSIDEAFAALDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 100 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALDD 159
           VDV TTPEQLTQLYDSIFEQFDCDKSGTVDA+EFR EMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVTTTPEQLTQLYDSIFEQFDCDKSGTVDADEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 160 GDQSFLKQAADLEASKLRQSST 181
           GDQSFLKQAADLEASKL QSST
Sbjct: 121 GDQSFLKQAADLEASKLAQSST 142

[Close]

BLAST of Chy4G080340 vs. NCBI nr
Match: XP_023526874.1 (uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258 bits (658), Expect = 2.10e-85
Identity = 132/141 (93.62%), Postives = 136/141 (96.45%), Query Frame = 0


Query: 40  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 99
           MAVVV+DGSTVRNFVNDESHF KS+D+AFASLDLNNDGVLSRSELRKAFETLRLIETHFG
Sbjct: 1   MAVVVIDGSTVRNFVNDESHFKKSVDEAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 60

Query: 100 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALDD 159
           VDV T PE+LTQLYDSIFEQFDCDKSGTVDAEEFR EMKNILLAIADGLGSSPIQMALDD
Sbjct: 61  VDVVTPPEKLTQLYDSIFEQFDCDKSGTVDAEEFRTEMKNILLAIADGLGSSPIQMALDD 120

Query: 160 GDQSFLKQAADLEASKLRQSS 180
           GDQSFLKQAADLEASKL QSS
Sbjct: 121 GDQSFLKQAADLEASKLAQSS 141

[Close]

BLAST of Chy4G080340 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 203.8 bits (517), Expect = 1.2e-52
Identity = 100/142 (70.42%), Postives = 122/142 (85.92%), Query Frame = 0


Query: 40  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 99
           M VV++DGSTVR+FV+DE  F KS+D+ FA+LDLN DGVLSRSELRKAFE++RL+E+HFG
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 100 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALDD 159
           VDV T  ++LT LYDSIFE+FD D+SG+VD EEFR EMK I+LAIADGLGS PI M LDD
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 160 GDQSFLKQAADLEASKLRQSST 182
            D +FLK+AADLEASKL ++S+
Sbjct: 121 DDDNFLKKAADLEASKLEKASS 142

[Close]

BLAST of Chy4G080340 vs. TAIR 10
Match: AT5G28830.1 (calcium-binding EF hand family protein )

HSP 1 Score: 62.0 bits (149), Expect = 5.7e-10
Identity = 35/119 (29.41%), Postives = 59/119 (49.58%), Query Frame = 0


Query: 40  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 99
           + V +LDG+ ++ F+ DE  F    ++ F  LD  + G L +SE+RKA         H G
Sbjct: 101 IVVSILDGTMLKMFLEDEDDFAMLAENLFTDLDEEDKGKLCKSEIRKAL-------VHMG 160

Query: 100 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALD 159
           V++   P     + D I ++ D D    +   +F + ++ +L  IAD L   PI + L+
Sbjct: 161 VEMGVPPLSEFPILDDIIKKHDADSDEELGQAQFAELLQQVLQEIADVLHEKPITIVLN 212

[Close]

BLAST of Chy4G080340 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.7e-09
Identity = 37/118 (31.36%), Postives = 56/118 (47.46%), Query Frame = 0


Query: 44  VLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFGVDVA 103
           VLDGS +   V +E  F+K ++  F  LD + DG LS +EL+ A      I    G+   
Sbjct: 14  VLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVAD---IGAALGLPAQ 73

Query: 104 TTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMALDDGD 162
            T      +Y  +  +F       V   EF++ + +ILL +A GL   PI +   DG+
Sbjct: 74  GTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGE 128

[Close]

BLAST of Chy4G080340 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08
Identity = 38/122 (31.15%), Postives = 65/122 (53.28%), Query Frame = 0


Query: 40  MAVVVLDGSTVRNFVNDESHFNKSIDDAFASLDLNNDGVLSRSELRKAFETLRLIETHFG 99
           M   V+   T+  F++D   F    +D F  LDL+ +G+LS SELR+    +  +E+   
Sbjct: 1   MIETVITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESE-- 60

Query: 100 VDVATTPEQLTQLYDSIFEQFDCDKSGTVDAEEFRKEMKNILLAIADGLGSSPIQMAL-D 159
                  ++   +Y++IFE+F  D    +  + FR  +  IL A+A G+G+SP+ M + +
Sbjct: 61  ---VAPGDETDNVYNAIFERFGED----LVPKNFRDLIAEILTAMARGIGNSPVIMVVHN 113

Query: 160 DG 161
           DG
Sbjct: 121 DG 113

The following BLAST results are available for this feature:

BLAST of Chy4G080340 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G080340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9X6	5.0e-70	99.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G706670 PE=4 SV=1	[more]
A0A5A7UE76	6.1e-68	96.48	Calcium-binding EF-hand OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CGR2	6.1e-68	96.48	uncharacterized protein LOC103500282 OS=Cucumis melo OX=3656 GN=LOC103500282 PE=...	[more]
A0A6J1J7W5	2.8e-65	92.91	uncharacterized protein LOC111482160 OS=Cucurbita maxima OX=3661 GN=LOC111482160...	[more]
A0A6J1F6Q4	8.2e-65	92.20	uncharacterized protein LOC111441377 OS=Cucurbita moschata OX=3662 GN=LOC1114413...	[more]

BLAST of Chy4G080340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004153292.1	3.40e-91	99.30	uncharacterized protein LOC101213961 [Cucumis sativus]	[more]
KAE8650949.1	5.04e-91	93.46	hypothetical protein Csa_002692 [Cucumis sativus]	[more]
XP_008461751.1	1.88e-88	96.48	PREDICTED: uncharacterized protein LOC103500282 [Cucumis melo] >KAA0052807.1 Cal...	[more]
XP_038905172.1	6.28e-87	94.37	uncharacterized protein LOC120091281 [Benincasa hispida]	[more]
XP_023526874.1	2.10e-85	93.62	uncharacterized protein LOC111790245 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy4G080340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	1.2e-52	70.42	Calcium-binding EF-hand family protein	[more]
AT5G28830.1	5.7e-10	29.41	calcium-binding EF hand family protein	[more]
AT4G38810.2	3.7e-09	31.36	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	1.1e-08	31.15	Calcium-binding EF hand family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 112..140 e-value: 0.011 score: 24.9 coord: 63..91 e-value: 0.0056 score: 25.9
IPR002048	EF-hand domain	PFAM	PF13499	EF-hand_7	coord: 64..138 e-value: 3.7E-11 score: 43.3
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 59..94 score: 10.691735
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 108..143 score: 11.221748
IPR002048	EF-hand domain	CDD	cd00051	EFh	coord: 64..138 e-value: 8.71957E-10 score: 50.6241
None	No IPR available	GENE3D	1.10.238.10		coord: 39..143 e-value: 2.0E-15 score: 59.0
None	No IPR available	PANTHER	PTHR34574:SF5	CALCIUM-BINDING EF-HAND FAMILY PROTEIN	coord: 40..178
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 40..178
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 121..133
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 72..84
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 52..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G080340.1	Chy4G080340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding