Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATTTCTTGACAACCACTTTGAAATGGCCTCTATGGCTGGAAACACCAATGGCTTTCTACAAGCCCCATTGACAGAAATGGGAATGGGAATGAGATCAATGGAAGAGAGGTTTAGATATGGAAGTTTGGAGGCTCAGAGATCAATGGAACTTGAGAGAGAAGTGCTATGTGTTCCACATGAAGAGATGAACCACCCTCCATTAATGAACAATAGATGCAGTTTTGATCAGTATTTGGGTACAAATGAGCAGAATTTGAATGTGGAGGAGATGTTTGGAGATATGGGAAGCCATGGTCAATTACAAGAAAGCTTGAAGATGGGTAATGAATGGGACTTGGAGAGTTTCATGCAAGATATATCCTCATTTCCTCATTTTCTTTGA
mRNA sequence
ATGCCATTTCTTGACAACCACTTTGAAATGGCCTCTATGGCTGGAAACACCAATGGCTTTCTACAAGCCCCATTGACAGAAATGGGAATGGGAATGAGATCAATGGAAGAGAGGTTTAGATATGGAAGTTTGGAGGCTCAGAGATCAATGGAACTTGAGAGAGAAGTGCTATGTGTTCCACATGAAGAGATGAACCACCCTCCATTAATGAACAATAGATGCAGTTTTGATCAGTATTTGGGTACAAATGAGCAGAATTTGAATGTGGAGGAGATGTTTGGAGATATGGGAAGCCATGGTCAATTACAAGAAAGCTTGAAGATGGGTAATGAATGGGACTTGGAGAGTTTCATGCAAGATATATCCTCATTTCCTCATTTTCTTTGA
Coding sequence (CDS)
ATGCCATTTCTTGACAACCACTTTGAAATGGCCTCTATGGCTGGAAACACCAATGGCTTTCTACAAGCCCCATTGACAGAAATGGGAATGGGAATGAGATCAATGGAAGAGAGGTTTAGATATGGAAGTTTGGAGGCTCAGAGATCAATGGAACTTGAGAGAGAAGTGCTATGTGTTCCACATGAAGAGATGAACCACCCTCCATTAATGAACAATAGATGCAGTTTTGATCAGTATTTGGGTACAAATGAGCAGAATTTGAATGTGGAGGAGATGTTTGGAGATATGGGAAGCCATGGTCAATTACAAGAAAGCTTGAAGATGGGTAATGAATGGGACTTGGAGAGTTTCATGCAAGATATATCCTCATTTCCTCATTTTCTTTGA
Protein sequence
MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMRSMEERFRYGSLEAQRSMELEREVLCVPHEEMNHPPLMNNRCSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQDISSFPHFL*
Homology
BLAST of Chy4G080000 vs. ExPASy TrEMBL
Match:
A0A0A0L9U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G696880 PE=4 SV=1)
HSP 1 Score: 263.5 bits (672), Expect = 4.8e-67
Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0
Query: 1 MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMRSMEERFRYGSLEAQRSMELEREVLCVP 60
MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMRSMEERFRYGSLEAQRSMELEREVLCVP
Sbjct: 48 MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMRSMEERFRYGSLEAQRSMELEREVLCVP 107
Query: 61 HEEMNHPPLMNNRCSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD 120
HEEMNHPPLMNNR SFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD
Sbjct: 108 HEEMNHPPLMNNRSSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD 167
Query: 121 ISSFPHFL 129
ISSFPHFL
Sbjct: 168 ISSFPHFL 175
BLAST of Chy4G080000 vs. ExPASy TrEMBL
Match:
A0A5D3BPM7 (Transcription factor MYB46-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00120 PE=4 SV=1)
HSP 1 Score: 252.7 bits (644), Expect = 8.4e-64
Identity = 126/129 (97.67%), Postives = 126/129 (97.67%), Query Frame = 0
Query: 1 MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMRSMEERFRYGSLEAQRSMELEREVLCVP 60
MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMR MEERFRYGSLEAQRSMELEREVLCVP
Sbjct: 189 MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMR-MEERFRYGSLEAQRSMELEREVLCVP 248
Query: 61 HEEMNHPPLMNNRCSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD 120
HEEMNHPPLMNNR SFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD
Sbjct: 249 HEEMNHPPLMNNRSSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD 308
Query: 121 I-SSFPHFL 129
I SSFPHFL
Sbjct: 309 ISSSFPHFL 316
BLAST of Chy4G080000 vs. ExPASy TrEMBL
Match:
A0A1S3CFJ0 (transcription factor MYB46-like OS=Cucumis melo OX=3656 GN=LOC103500311 PE=4 SV=1)
HSP 1 Score: 252.7 bits (644), Expect = 8.4e-64
Identity = 126/129 (97.67%), Postives = 126/129 (97.67%), Query Frame = 0
Query: 1 MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMRSMEERFRYGSLEAQRSMELEREVLCVP 60
MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMR MEERFRYGSLEAQRSMELEREVLCVP
Sbjct: 189 MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMR-MEERFRYGSLEAQRSMELEREVLCVP 248
Query: 61 HEEMNHPPLMNNRCSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD 120
HEEMNHPPLMNNR SFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD
Sbjct: 249 HEEMNHPPLMNNRSSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD 308
Query: 121 I-SSFPHFL 129
I SSFPHFL
Sbjct: 309 ISSSFPHFL 316
BLAST of Chy4G080000 vs. ExPASy TrEMBL
Match:
A0A6J1GC35 (transcription factor MYB46-like OS=Cucurbita moschata OX=3662 GN=LOC111452781 PE=4 SV=1)
HSP 1 Score: 203.4 bits (516), Expect = 5.8e-49
Identity = 106/131 (80.92%), Postives = 112/131 (85.50%), Query Frame = 0
Query: 1 MPFLDNHFEMASMAGNTNGFLQAP---LTEMGMGMRSMEERFRYGSLEAQRSMELEREVL 60
MPFLDN+FEMASM G TNGFLQAP TEMGM M MEER YGSLEAQRSME+EREVL
Sbjct: 190 MPFLDNNFEMASMVGATNGFLQAPGGCATEMGMRM-IMEERLSYGSLEAQRSMEVEREVL 249
Query: 61 CVPHEEMNHPPLMNNRCSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESF 120
C+PHEE MNNR +FD+YLGTNEQNLNVEEMFGDMGSHGQ+QESLKMGNEWDLESF
Sbjct: 250 CLPHEE------MNNRSNFDEYLGTNEQNLNVEEMFGDMGSHGQVQESLKMGNEWDLESF 309
Query: 121 MQDISSFPHFL 129
M DISSFPHFL
Sbjct: 310 MLDISSFPHFL 313
BLAST of Chy4G080000 vs. ExPASy TrEMBL
Match:
A0A6J1KCL7 (transcription factor MYB46-like OS=Cucurbita maxima OX=3661 GN=LOC111493095 PE=4 SV=1)
HSP 1 Score: 201.8 bits (512), Expect = 1.7e-48
Identity = 105/131 (80.15%), Postives = 112/131 (85.50%), Query Frame = 0
Query: 1 MPFLDNHFEMASMAGNTNGFLQAP---LTEMGMGMRSMEERFRYGSLEAQRSMELEREVL 60
MPFLDN+FEMASM G TNGFLQAP TEMGM M ME+R YGSLEAQRSMELEREVL
Sbjct: 190 MPFLDNNFEMASMVGATNGFLQAPGGCATEMGMRM-IMEQRLSYGSLEAQRSMELEREVL 249
Query: 61 CVPHEEMNHPPLMNNRCSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESF 120
C+PHEE MNNR +FD+YLGTNEQNLN+EEMFGDM SHGQ+QESLKMGNEWDLESF
Sbjct: 250 CLPHEE------MNNRSNFDEYLGTNEQNLNMEEMFGDMESHGQVQESLKMGNEWDLESF 309
Query: 121 MQDISSFPHFL 129
MQDISSFPHFL
Sbjct: 310 MQDISSFPHFL 313
BLAST of Chy4G080000 vs. NCBI nr
Match:
XP_004149614.1 (transcription factor MYB46 [Cucumis sativus] >XP_031737713.1 transcription factor MYB46 [Cucumis sativus] >KAE8650933.1 hypothetical protein Csa_001273 [Cucumis sativus])
HSP 1 Score: 263 bits (673), Expect = 4.13e-86
Identity = 127/128 (99.22%), Postives = 127/128 (99.22%), Query Frame = 0
Query: 1 MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMRSMEERFRYGSLEAQRSMELEREVLCVP 60
MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMRSMEERFRYGSLEAQRSMELEREVLCVP
Sbjct: 189 MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMRSMEERFRYGSLEAQRSMELEREVLCVP 248
Query: 61 HEEMNHPPLMNNRCSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD 120
HEEMNHPPLMNNR SFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD
Sbjct: 249 HEEMNHPPLMNNRSSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD 308
Query: 121 ISSFPHFL 128
ISSFPHFL
Sbjct: 309 ISSFPHFL 316
BLAST of Chy4G080000 vs. NCBI nr
Match:
XP_008461794.1 (PREDICTED: transcription factor MYB46-like [Cucumis melo] >KAA0048349.1 transcription factor MYB46-like [Cucumis melo var. makuwa] >TYK01115.1 transcription factor MYB46-like [Cucumis melo var. makuwa])
HSP 1 Score: 253 bits (645), Expect = 7.30e-82
Identity = 126/129 (97.67%), Postives = 126/129 (97.67%), Query Frame = 0
Query: 1 MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMRSMEERFRYGSLEAQRSMELEREVLCVP 60
MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMR MEERFRYGSLEAQRSMELEREVLCVP
Sbjct: 189 MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGMR-MEERFRYGSLEAQRSMELEREVLCVP 248
Query: 61 HEEMNHPPLMNNRCSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD 120
HEEMNHPPLMNNR SFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD
Sbjct: 249 HEEMNHPPLMNNRSSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQD 308
Query: 121 ISS-FPHFL 128
ISS FPHFL
Sbjct: 309 ISSSFPHFL 316
BLAST of Chy4G080000 vs. NCBI nr
Match:
XP_038905632.1 (transcription factor MYB46-like [Benincasa hispida])
HSP 1 Score: 223 bits (568), Expect = 3.82e-70
Identity = 113/132 (85.61%), Postives = 118/132 (89.39%), Query Frame = 0
Query: 1 MPFLDNHFEMASMAGNTNGFLQAPLTEMGMGM---RSMEERFRYGSLEAQRSMELEREVL 60
MPFLDN+FEMAS+AG NGFLQ LTEMGMGM MEERF YG+LE QRSMELEREVL
Sbjct: 189 MPFLDNNFEMASVAGANNGFLQPSLTEMGMGMGMGMRMEERFSYGNLEGQRSMELEREVL 248
Query: 61 CVPHEEMNHPPLMNN-RCSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLES 120
C+PHEEM +PPLMNN R SFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLES
Sbjct: 249 CLPHEEMMNPPLMNNNRSSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLES 308
Query: 121 FMQDISSFPHFL 128
FMQDISSFPHFL
Sbjct: 309 FMQDISSFPHFL 320
BLAST of Chy4G080000 vs. NCBI nr
Match:
KAG7036583.1 (hypothetical protein SDJN02_00202, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 203 bits (517), Expect = 4.35e-64
Identity = 106/131 (80.92%), Postives = 112/131 (85.50%), Query Frame = 0
Query: 1 MPFLDNHFEMASMAGNTNGFLQAP---LTEMGMGMRSMEERFRYGSLEAQRSMELEREVL 60
MPFLDN+FEMASM G TNGFLQAP TEMGM M MEER YGSLEAQRSME+EREVL
Sbjct: 72 MPFLDNNFEMASMVGATNGFLQAPGGCATEMGMRM-IMEERLSYGSLEAQRSMEVEREVL 131
Query: 61 CVPHEEMNHPPLMNNRCSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESF 120
C+PHEEMN NR +FD+YLGTNEQNLNVEEMFGDMGSHGQ+QESLKMGNEWDLESF
Sbjct: 132 CLPHEEMN------NRSNFDEYLGTNEQNLNVEEMFGDMGSHGQVQESLKMGNEWDLESF 191
Query: 121 MQDISSFPHFL 128
M DISSFPHFL
Sbjct: 192 MLDISSFPHFL 195
BLAST of Chy4G080000 vs. NCBI nr
Match:
XP_022949432.1 (transcription factor MYB46-like [Cucurbita moschata] >XP_022949433.1 transcription factor MYB46-like [Cucurbita moschata])
HSP 1 Score: 203 bits (517), Expect = 1.60e-62
Identity = 106/131 (80.92%), Postives = 112/131 (85.50%), Query Frame = 0
Query: 1 MPFLDNHFEMASMAGNTNGFLQAP---LTEMGMGMRSMEERFRYGSLEAQRSMELEREVL 60
MPFLDN+FEMASM G TNGFLQAP TEMGM M MEER YGSLEAQRSME+EREVL
Sbjct: 190 MPFLDNNFEMASMVGATNGFLQAPGGCATEMGMRM-IMEERLSYGSLEAQRSMEVEREVL 249
Query: 61 CVPHEEMNHPPLMNNRCSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESF 120
C+PHEEMN NR +FD+YLGTNEQNLNVEEMFGDMGSHGQ+QESLKMGNEWDLESF
Sbjct: 250 CLPHEEMN------NRSNFDEYLGTNEQNLNVEEMFGDMGSHGQVQESLKMGNEWDLESF 309
Query: 121 MQDISSFPHFL 128
M DISSFPHFL
Sbjct: 310 MLDISSFPHFL 313
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L9U4 | 4.8e-67 | 99.22 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G696880 PE=4 SV=1 | [more] |
A0A5D3BPM7 | 8.4e-64 | 97.67 | Transcription factor MYB46-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
A0A1S3CFJ0 | 8.4e-64 | 97.67 | transcription factor MYB46-like OS=Cucumis melo OX=3656 GN=LOC103500311 PE=4 SV=... | [more] |
A0A6J1GC35 | 5.8e-49 | 80.92 | transcription factor MYB46-like OS=Cucurbita moschata OX=3662 GN=LOC111452781 PE... | [more] |
A0A6J1KCL7 | 1.7e-48 | 80.15 | transcription factor MYB46-like OS=Cucurbita maxima OX=3661 GN=LOC111493095 PE=4... | [more] |
Match Name | E-value | Identity | Description | |
XP_004149614.1 | 4.13e-86 | 99.22 | transcription factor MYB46 [Cucumis sativus] >XP_031737713.1 transcription facto... | [more] |
XP_008461794.1 | 7.30e-82 | 97.67 | PREDICTED: transcription factor MYB46-like [Cucumis melo] >KAA0048349.1 transcri... | [more] |
XP_038905632.1 | 3.82e-70 | 85.61 | transcription factor MYB46-like [Benincasa hispida] | [more] |
KAG7036583.1 | 4.35e-64 | 80.92 | hypothetical protein SDJN02_00202, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022949432.1 | 1.60e-62 | 80.92 | transcription factor MYB46-like [Cucurbita moschata] >XP_022949433.1 transcripti... | [more] |
Match Name | E-value | Identity | Description | |