Chy4G079550 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G079550
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	TMV resistance protein N-like
Location	chrH04: 18899311 .. 18900008 (-)
RNA-Seq Expression	Chy4G079550
Synteny	Chy4G079550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATTCCAAGGTTTCCAACAATCATCGAGCCACCTTCTGCCTCACCAACTTCATTATCCCCTCCTTCAAACGCATATGATGTTTTCATAAGAGATACTATTGCTTCTGAATTGGCCAAAGAGTTGTCAAATATATTCTGGTAACAAGGACATTGATTAAAGATGGGTTGGGGTTCATATTTGACCAACATTATATTCAGGTACACGATGCAATAAAAAGATCAAGATGTTTGGTTATTGTTCTAACAAAAGATTACGAAAAATCGATTACGGGTTTGAGAGAGTTAAGCAAAATAATGGAACAGAGATTAGGGGAAGATTGCGAAGAAGTCATCCCAGTGTTTTACCAAGATCCACCTGTTTTGGTAAAAGAATTACAAGATTTTGTTAAGTTATTGAAATATTGCATTGAAGGAAAAGAAGAAACATTCTCCAAGTGTAGGCCGTCTTTTAAGATTTTGAACAGAACAAAAAGGGCCAGCACAGATTTGCCACCAGAGCTTCGCAAACATAACGACTTAGATTATGTATTCTCAGAAGAAGACAATCAAAAGCTTTTGATGGAGATTCCAACATGGAAATCTGCTTTGGAAAGAATCAGCACTTCCCCAAATACAAAACTTGTAGAAGAAAACAGGCGGCACAAGTTAATAGCATTGATAGAAACTCAAACATGTCTATGTTTATTTAAATAG

mRNA sequence

ATGTCCATTCCAAGGTTTCCAACAATCATCGAGCCACCTTCTGCCTCACCAACTTCATTATCCCCTCCTTCAAACGCATATGATGTACACGATGCAATAAAAAGATCAAGATGTTTGGTTATTGTTCTAACAAAAGATTACGAAAAATCGATTACGGGTTTGAGAGAGTTAAGCAAAATAATGGAACAGAGATTAGGGGAAGATTGCGAAGAAGTCATCCCAGTGTTTTACCAAGATCCACCTGTTTTGGTAAAAGAATTACAAGATTTTGTTAAGTTATTGAAATATTGCATTGAAGGAAAAGAAGAAACATTCTCCAAGTGTAGGCCGTCTTTTAAGATTTTGAACAGAACAAAAAGGGCCAGCACAGATTTGCCACCAGAGCTTCGCAAACATAACGACTTAGATTATGTATTCTCAGAAGAAGACAATCAAAAGCTTTTGATGGAGATTCCAACATGGAAATCTGCTTTGGAAAGAATCAGCACTTCCCCAAATACAAAACTTGTAGAAGAAAACAGGCGGCACAAGTTAATAGCATTGATAGAAACTCAAACATGTCTATGTTTATTTAAATAG

Coding sequence (CDS)

ATGTCCATTCCAAGGTTTCCAACAATCATCGAGCCACCTTCTGCCTCACCAACTTCATTATCCCCTCCTTCAAACGCATATGATGTACACGATGCAATAAAAAGATCAAGATGTTTGGTTATTGTTCTAACAAAAGATTACGAAAAATCGATTACGGGTTTGAGAGAGTTAAGCAAAATAATGGAACAGAGATTAGGGGAAGATTGCGAAGAAGTCATCCCAGTGTTTTACCAAGATCCACCTGTTTTGGTAAAAGAATTACAAGATTTTGTTAAGTTATTGAAATATTGCATTGAAGGAAAAGAAGAAACATTCTCCAAGTGTAGGCCGTCTTTTAAGATTTTGAACAGAACAAAAAGGGCCAGCACAGATTTGCCACCAGAGCTTCGCAAACATAACGACTTAGATTATGTATTCTCAGAAGAAGACAATCAAAAGCTTTTGATGGAGATTCCAACATGGAAATCTGCTTTGGAAAGAATCAGCACTTCCCCAAATACAAAACTTGTAGAAGAAAACAGGCGGCACAAGTTAATAGCATTGATAGAAACTCAAACATGTCTATGTTTATTTAAATAG

Protein sequence

MSIPRFPTIIEPPSASPTSLSPPSNAYDVHDAIKRSRCLVIVLTKDYEKSITGLRELSKIMEQRLGEDCEEVIPVFYQDPPVLVKELQDFVKLLKYCIEGKEETFSKCRPSFKILNRTKRASTDLPPELRKHNDLDYVFSEEDNQKLLMEIPTWKSALERISTSPNTKLVEENRRHKLIALIETQTCLCLFK*

Homology

[Close]

BLAST of Chy4G079550 vs. ExPASy TrEMBL
Match: A0A5A7T750 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00960 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.0e-52
Identity = 137/233 (58.80%), Postives = 150/233 (64.38%), Query Frame = 0


Query: 1   MSIPRFPTIIEPPSASPTSLSPPSNAY-----------------DVH------------- 60
           MSIPRFPTII+PP A   SLSPPSNAY                 D++             
Sbjct: 1   MSIPRFPTIIKPPYA---SLSPPSNAYHDVFISCRRNDIETLRPDLYISFVSELVRELSR 60

Query: 61  ----------------------------DAIKRSRCLVIVLTKDYEKSITGLRELSKIME 120
                                       DAIKRSRCLVIVLTK Y KSIT LRELSKIME
Sbjct: 61  SNFQVTGTLINDDSEVLFGHYSPNTVQLDAIKRSRCLVIVLTKGYVKSITCLRELSKIME 120

Query: 121 Q-RLGEDCEEVIPVFYQDPPVLVKELQDFVKLLKYCIEGKEETFSKCRPSFKILNRTKRA 175
           + R  EDC+EVIPVFYQDP +LVKELQDF KLL+  IEGK+ETF K + SFKIL+RT R 
Sbjct: 121 EYRSWEDCKEVIPVFYQDPTILVKELQDFGKLLECYIEGKKETFFKWK-SFKILSRTNRG 180

[Close]

BLAST of Chy4G079550 vs. ExPASy TrEMBL
Match: A0A5A7TGD6 (TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001600 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 9.4e-19
Identity = 82/203 (40.39%), Postives = 100/203 (49.26%), Query Frame = 0


Query: 10  IEPPSASPTSLSPPS------------------------------------NAYDVH-DA 69
           + PPS SPTS SPP+                                    +   +H DA
Sbjct: 1   MNPPSTSPTSSSPPNTCQVFISFATADSKFVSELAKEFRNIRLRTFMSSGDDGEIIHEDA 60

Query: 70  IKRSRCLVIVLTKDYEKSITGLRELSKIMEQRLGEDCEEVIPVFYQDPPVLVKELQDFVK 129
           +K+SR  V+VLTKDY  SI  LRELS+IME +  E  EEVIPVFYQDP  LVKELQDF K
Sbjct: 61  MKKSRHFVVVLTKDYVNSIKCLRELSRIMEYK-DEGYEEVIPVFYQDPSCLVKELQDFGK 120

Query: 130 LLK-YCIEGKEETFSKCRPSFKILNRTKRASTDLPPELRKHNDLDYVFSEEDNQKLLMEI 175
            L+ Y    KEE   +    + +        TDL   L K     +   EE+   LLME+
Sbjct: 121 RLEDYEEIIKEEGLIEFTHCWFL-------KTDLAKRLNK----SFSEKEENKSNLLMEV 180

[Close]

BLAST of Chy4G079550 vs. ExPASy TrEMBL
Match: A0A1S3CPB4 (TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103503300 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.6e-18
Identity = 81/201 (40.30%), Postives = 99/201 (49.25%), Query Frame = 0


Query: 10  IEPPSASPTSLSPPS------------------------------------NAYDVH-DA 69
           + PPS SPTS SPP+                                    +   +H DA
Sbjct: 1   MNPPSTSPTSSSPPNTCQVFISFATADSKFVSELAKEFRNIRLRTFMSSGDDGEIIHEDA 60

Query: 70  IKRSRCLVIVLTKDYEKSITGLRELSKIMEQRLGEDCEEVIPVFYQDPPVLVKELQDFVK 129
           +K+SR  V+VLTKDY  SI  LRELS+IME +  E  EEVIPVFYQDP  LVKELQDF K
Sbjct: 61  MKKSRHFVVVLTKDYVNSIKCLRELSRIMEYK-DEGYEEVIPVFYQDPSCLVKELQDFGK 120

Query: 130 LLK-YCIEGKEETFSKCRPSFKILNRTKRASTDLPPELRKHNDLDYVFSEEDNQKLLMEI 173
            L+ Y    KEE   +    + +        TDL   L K     +   EE+   LLME+
Sbjct: 121 RLEDYEEIIKEEGLIEFTHCWFL-------KTDLAKRLNK----SFSEKEENKSNLLMEV 180

[Close]

BLAST of Chy4G079550 vs. ExPASy TrEMBL
Match: A0A2P6QU38 (Putative winged helix-turn-helix DNA-binding domain, toll-like receptor OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0405381 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 6.6e-04
Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 26  AYDVHDAIKRSRCLVIVLTKDYEKSITGLRELSKIMEQRLGEDCEEVIPVFYQ-DPPVLV 85
           A ++  AI+ SR  V+VL++DY  S   L EL+KIME+R  ED   VIPVFY  DP  + 
Sbjct: 64  AAELQRAIEESRVSVVVLSRDYAASRWCLDELAKIMERRRNEDAHVVIPVFYDVDPSHVR 123

Query: 86  KELQDFVK 93
           K++  F +
Sbjct: 124 KQIGSFAE 131

[Close]

BLAST of Chy4G079550 vs. NCBI nr
Match: KAA0039304.1 (TMV resistance protein N-like [Cucumis melo var. makuwa] >TYK00487.1 TMV resistance protein N-like [Cucumis melo var. makuwa])

HSP 1 Score: 217 bits (553), Expect = 5.19e-68
Identity = 137/233 (58.80%), Postives = 150/233 (64.38%), Query Frame = 0


Query: 1   MSIPRFPTIIEPPSASPTSLSPPSNAY-----------------DVH------------- 60
           MSIPRFPTII+PP AS   LSPPSNAY                 D++             
Sbjct: 1   MSIPRFPTIIKPPYAS---LSPPSNAYHDVFISCRRNDIETLRPDLYISFVSELVRELSR 60

Query: 61  ----------------------------DAIKRSRCLVIVLTKDYEKSITGLRELSKIME 120
                                       DAIKRSRCLVIVLTK Y KSIT LRELSKIME
Sbjct: 61  SNFQVTGTLINDDSEVLFGHYSPNTVQLDAIKRSRCLVIVLTKGYVKSITCLRELSKIME 120

Query: 121 Q-RLGEDCEEVIPVFYQDPPVLVKELQDFVKLLKYCIEGKEETFSKCRPSFKILNRTKRA 174
           + R  EDC+EVIPVFYQDP +LVKELQDF KLL+  IEGK+ETF K + SFKIL+RT R 
Sbjct: 121 EYRSWEDCKEVIPVFYQDPTILVKELQDFGKLLECYIEGKKETFFKWK-SFKILSRTNRG 180

[Close]

BLAST of Chy4G079550 vs. NCBI nr
Match: KAA0040637.1 (TMV resistance protein N-like [Cucumis melo var. makuwa] >TYK05684.1 TMV resistance protein N-like [Cucumis melo var. makuwa])

HSP 1 Score: 105 bits (261), Expect = 1.91e-24
Identity = 71/145 (48.97%), Postives = 85/145 (58.62%), Query Frame = 0


Query: 31  DAIKRSRCLVIVLTKDYEKSITGLRELSKIMEQRLGEDCEEVIPVFYQDPPVLVKELQDF 90
           DA+K+SR  V+VLTKDY  SI  LRELS+IME +  E  EEVIPVFYQDP  LVKELQDF
Sbjct: 59  DAMKKSRHFVVVLTKDYVNSIKCLRELSRIMEYK-DEGYEEVIPVFYQDPSCLVKELQDF 118

Query: 91  VKLLKYCIEG-KEETFSKCRPSFKILNRTKRASTDLPPELRKHNDLDYVFSEEDNQKLLM 150
            K L+   E  KEE   +    + +        TDL   L K     +   EE+   LLM
Sbjct: 119 GKRLEDYEEIIKEEGLIEFTHCWFL-------KTDLAKRLNK----SFSEKEENKSNLLM 178

Query: 151 EIPTWKSALERISTSPNTKLVEENR 174
           E+P WK ALERI+  P +  V E R
Sbjct: 179 EVPRWKFALERINNLPKSIFVGEER 191

[Close]

BLAST of Chy4G079550 vs. NCBI nr
Match: XP_008465659.2 (PREDICTED: TMV resistance protein N-like [Cucumis melo])

HSP 1 Score: 103 bits (256), Expect = 1.31e-21
Identity = 70/143 (48.95%), Postives = 84/143 (58.74%), Query Frame = 0


Query: 31  DAIKRSRCLVIVLTKDYEKSITGLRELSKIMEQRLGEDCEEVIPVFYQDPPVLVKELQDF 90
           DA+K+SR  V+VLTKDY  SI  LRELS+IME +  E  EEVIPVFYQDP  LVKELQDF
Sbjct: 59  DAMKKSRHFVVVLTKDYVNSIKCLRELSRIMEYK-DEGYEEVIPVFYQDPSCLVKELQDF 118

Query: 91  VKLLKYCIEG-KEETFSKCRPSFKILNRTKRASTDLPPELRKHNDLDYVFSEEDNQKLLM 150
            K L+   E  KEE   +    + +        TDL   L K     +   EE+   LLM
Sbjct: 119 GKRLEDYEEIIKEEGLIEFTHCWFL-------KTDLAKRLNK----SFSEKEENKSNLLM 178

Query: 151 EIPTWKSALERISTSPNTKLVEE 172
           E+P WK ALERI+  P +  V E
Sbjct: 179 EVPRWKFALERINNLPKSIFVGE 189

[Close]

BLAST of Chy4G079550 vs. NCBI nr
Match: XP_038890297.1 (TMV resistance protein N-like [Benincasa hispida])

HSP 1 Score: 77.8 bits (190), Expect = 8.53e-13
Identity = 59/150 (39.33%), Postives = 73/150 (48.67%), Query Frame = 0


Query: 31  DAIKRSRCLVIVLTKDYEKSITGLRELSKIMEQRLGEDCEEVIPVFYQD-PPVLVKELQD 90
           +AIK SR  ++VLTKDY  SI  LRELS+IME R GED EEVI VFY+D P  LVKEL+D
Sbjct: 75  EAIKNSRHFIVVLTKDYVTSIRCLRELSRIMESR-GEDYEEVITVFYKDHPSCLVKELED 134

Query: 91  FVKLLKYCIEGKEETFSKCRPSFKILNRTKRASTDLPPELRKHNDLDYVFSEEDNQKLLM 150
           F K L+   + K+E                                         QKLLM
Sbjct: 135 FGKRLE---DHKKEV---------------------------------------KQKLLM 181

Query: 151 EIPTWKSALERISTSPNTKLVEENRRHKLI 179
           E+P      +  +  P T  VEE R H+ +
Sbjct: 195 ELPRCTLLWKDSANLPKTIFVEEKRYHQQV 181

[Close]

BLAST of Chy4G079550 vs. NCBI nr
Match: XP_024195282.1 (disease resistance protein RPV1 isoform X2 [Rosa chinensis] >PRQ37687.1 putative winged helix-turn-helix DNA-binding domain, toll-like receptor [Rosa chinensis])

HSP 1 Score: 55.1 bits (131), Expect = 5.61e-05
Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 26  AYDVHDAIKRSRCLVIVLTKDYEKSITGLRELSKIMEQRLGEDCEEVIPVFYQ-DPPVLV 85
           A ++  AI+ SR  V+VL++DY  S   L EL+KIME+R  ED   VIPVFY  DP  + 
Sbjct: 64  AAELQRAIEESRVSVVVLSRDYAASRWCLDELAKIMERRRNEDAHVVIPVFYDVDPSHVR 123

Query: 86  KELQDFVK 92
           K++  F +
Sbjct: 124 KQIGSFAE 131

[Close]

BLAST of Chy4G079550 vs. TAIR 10
Match: AT2G14080.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 45.4 bits (106), Expect = 5.9e-05
Identity = 30/78 (38.46%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 31  DAIKRSRCLVIVLTKDYEKSITGLRELSKIMEQRLGEDCEEVIPVFYQ-DPPVLVKELQD 90
           +AIK S+  V++L+KDY  S   L EL +IM+ R   D + V+ +FY+ DP  + K+  D
Sbjct: 104 EAIKGSKIAVVLLSKDYASSSWCLNELVEIMKCRKMLD-QTVMTIFYEVDPTDVKKQTGD 163

Query: 91  FVKLLKYCIEGKEETFSK 108
           F K+ K    GK    S+
Sbjct: 164 FGKVFKKTCMGKTNAVSR 180

[Close]

BLAST of Chy4G079550 vs. TAIR 10
Match: AT5G46450.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 45.4 bits (106), Expect = 5.9e-05
Identity = 40/113 (35.40%), Postives = 60/113 (53.10%), Query Frame = 0


Query: 24  SNAYDVHDAIKRSRCLVIVLTKDYEKSITGLRELSKIM--EQRLGEDCEEVIPVFYQ-DP 83
           S A ++ +AIK SR  VIV +K+Y  S   L EL +IM   + LG   ++VIPVFY  DP
Sbjct: 54  SIAPELVEAIKDSRIAVIVFSKNYASSSWCLNELLEIMRCNKYLG---QQVIPVFYYLDP 113

Query: 84  PVLVKELQDFVKLLKYCIEGKEETFSKCRPSFKILNRTKRASTDLPPELRKHN 134
             L K+  +F +  K   + + E         ++ N+ K+A TD+   L  H+
Sbjct: 114 SHLRKQSGEFGEAFKKTCQNQTE---------EVKNQWKQALTDVSNILGYHS 154

[Close]

BLAST of Chy4G079550 vs. TAIR 10
Match: AT1G57630.1 (Toll-Interleukin-Resistance (TIR) domain family protein )

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04
Identity = 28/73 (38.36%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 32  AIKRSRCLVIVLTKDYEKSITGLRELSKIMEQRLGEDCEEVIPVFYQ-DPPVLVKELQDF 91
           AIK S+  +++L+K+Y  S   L EL +IM++  G   + VI +FY+ DP  + K+  DF
Sbjct: 72  AIKGSKIALVLLSKNYASSWCCLDELVEIMKKESG---QTVITIFYEVDPNEVKKQTGDF 131

Query: 92  VKLLKYCIEGKEE 104
            K  K   +GK E
Sbjct: 132 GKAFKETCQGKTE 141

[Close]

BLAST of Chy4G079550 vs. TAIR 10
Match: AT4G36140.1 (disease resistance protein (TIR-NBS-LRR class), putative )

HSP 1 Score: 43.9 bits (102), Expect = 1.7e-04
Identity = 46/167 (27.54%), Postives = 81/167 (48.50%), Query Frame = 0


Query: 6   FPTIIEPPSASPTSLSPPSNAYDVHDAIKRSRCLVIVLTKDYEKSITGLRELSKIM--EQ 65
           F  +I+  +    S+ P     ++ +AI  SR +++VL+++Y  S   L EL +IM  ++
Sbjct: 78  FEPLIDNETERCVSIGP-----ELRNAISVSRIVIVVLSRNYALSPWCLDELVEIMKCKE 137

Query: 66  RLGEDCEEVIPVFYQ-DPPVLVKELQDFVKLLKYCIEGK-EETFSKCRPSFKILNRTKRA 125
            LG   + V+ +FY  DP  ++K+  DF    +   +GK +E   KC  +   L R  + 
Sbjct: 138 ELG---QRVVTIFYNLDPIDVLKQTGDFGDNFRKTRKGKTDEDIWKCTRALAELPRVYKL 197

Query: 126 STDL-----PPELRKHNDLDYVFSEEDNQKLLMEIPTWKSALERIST 164
           ++ L        + KH        EE  +K   +I  W  ALE+++T
Sbjct: 198 TSRLSIKIDDTAMNKHR-------EECERKNKEDIDRWIKALEQVAT 229

[Close]

BLAST of Chy4G079550 vs. TAIR 10
Match: AT1G31540.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 41.6 bits (96), Expect = 8.5e-04
Identity = 43/135 (31.85%), Postives = 63/135 (46.67%), Query Frame = 0


Query: 28  DVHDAIKRSRCLVIVLTKDYEKSITGLRELSKIMEQRLGEDCEE--VIPVFYQ-DPPVLV 87
           D+  AIK SR  V+V +K+Y  S   L EL +I+      +C +  VIPVFY  DP  + 
Sbjct: 57  DLEQAIKESRIAVVVFSKNYASSSWCLNELLEIV------NCNDKIVIPVFYHVDPSQVR 116

Query: 88  KELQDFVKLLKYCIEGKEETFSKCRPSFKILNRTKRASTDLPPEL----RKHNDLDYVFS 147
            ++ DF K+         E   K +   ++ N+ K+A T +   L     K ND   +  
Sbjct: 117 HQIGDFGKIF--------ENTCKRQTDEEVKNQWKKALTLVANMLGFDSAKWNDEAKMIE 176

Query: 148 EEDNQ---KLLMEIP 153
           E  N    KLL+  P
Sbjct: 177 EIANDVLGKLLLTTP 177

The following BLAST results are available for this feature:

BLAST of Chy4G079550 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G079550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T750	1.0e-52	58.80	TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TGD6	9.4e-19	40.39	TMV resistance protein N-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3CPB4	3.6e-18	40.30	TMV resistance protein N-like OS=Cucumis melo OX=3656 GN=LOC103503300 PE=4 SV=1	[more]
A0A2P6QU38	6.6e-04	45.59	Putative winged helix-turn-helix DNA-binding domain, toll-like receptor OS=Rosa ...	[more]

BLAST of Chy4G079550 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039304.1	5.19e-68	58.80	TMV resistance protein N-like [Cucumis melo var. makuwa] >TYK00487.1 TMV resista...	[more]
KAA0040637.1	1.91e-24	48.97	TMV resistance protein N-like [Cucumis melo var. makuwa] >TYK05684.1 TMV resista...	[more]
XP_008465659.2	1.31e-21	48.95	PREDICTED: TMV resistance protein N-like [Cucumis melo]	[more]
XP_038890297.1	8.53e-13	39.33	TMV resistance protein N-like [Benincasa hispida]	[more]
XP_024195282.1	5.61e-05	45.59	disease resistance protein RPV1 isoform X2 [Rosa chinensis] >PRQ37687.1 putative...	[more]

BLAST of Chy4G079550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14080.1	5.9e-05	38.46	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT5G46450.1	5.9e-05	35.40	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G57630.1	1.7e-04	38.36	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT4G36140.1	1.7e-04	27.54	disease resistance protein (TIR-NBS-LRR class), putative	[more]
AT1G31540.1	8.5e-04	31.85	Disease resistance protein (TIR-NBS-LRR class) family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF01582	TIR	coord: 27..101 e-value: 1.4E-9 score: 38.0
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 24..190 e-value: 3.6E-12 score: 48.2
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 29..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G079550.1	Chy4G079550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0003953	NAD+ nucleosidase activity