Chy4G079070 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G079070
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chrH04: 18266412 .. 18267209 (-)
RNA-Seq Expression	Chy4G079070
Synteny	Chy4G079070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGTTGTTCCTTTGAATGCATTTACCGAGCTCTCGTCCTCGGTTCGCAGCAACAGTAGAGTCACAATGAGGAAATCTGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCTGACCGTGTCAAGTACCTTGGACCGTTCTCTGGTGAGCCTCCATCTTACCTCAAAGGTGAATTTCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGACCCCGAGACATTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCTGAGCTTCTTTCTAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATTCATGCACAGAGCATTTTGGCAATTTGGGCATCTCAAGTAGTGTTAATGGGTGCTGTTGAAGGTTACCGTATTGCTGGAGGACCACTCGGAGAGATTACTGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTTGGATTGGCTGATGATCCAGAGGCATTTGCAGAACTTAAGGTGAAAGAACTTAAGAATGGTCGTCTTGCAATGTTTTCCATGTTCGGGTTTTTCGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCAGACCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGAAAGTGA

mRNA sequence

ATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGTTGTTCCTTTGAATGCATTTACCGAGCTCTCGTCCTCGGTTCGCAGCAACAGTAGAGTCACAATGAGGAAATCTGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCTGACCGTGTCAAGTACCTTGGACCGTTCTCTGGTGAGCCTCCATCTTACCTCAAAGGTGAATTTCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGACCCCGAGACATTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCTGAGCTTCTTTCTAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATTCATGCACAGAGCATTTTGGCAATTTGGGCATCTCAAGTAGTGTTAATGGGTGCTGTTGAAGGTTACCGTATTGCTGGAGGACCACTCGGAGAGATTACTGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTTGGATTGGCTGATGATCCAGAGGCATTTGCAGAACTTAAGGTGAAAGAACTTAAGAATGGTCGTCTTGCAATGTTTTCCATGTTCGGGTTTTTCGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCAGACCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGAAAGTGA

Coding sequence (CDS)

ATGGCAGCCATGGCTCTTTCATCTACATTCACAGGAAAAGTTGTTCCTTTGAATGCATTTACCGAGCTCTCGTCCTCGGTTCGCAGCAACAGTAGAGTCACAATGAGGAAATCTGGAAAGCCAGCAGCTTCCTCAGGCAGCCCATGGTATGGTCCTGACCGTGTCAAGTACCTTGGACCGTTCTCTGGTGAGCCTCCATCTTACCTCAAAGGTGAATTTCCTGGTGACTATGGTTGGGACACTGCAGGTCTATCAGCTGACCCCGAGACATTTGCCAAGAACCGAGAGCTCGAAGTGATTCACAGTAGATGGGCCATGCTTGGGGCTCTAGGATGTGTATTCCCTGAGCTTCTTTCTAGAAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTCAAGGCTGGTTCACAAATCTTCAGTGAGGGTGGCCTAGACTATCTTGGAAACCCAAGTCTTATTCATGCACAGAGCATTTTGGCAATTTGGGCATCTCAAGTAGTGTTAATGGGTGCTGTTGAAGGTTACCGTATTGCTGGAGGACCACTCGGAGAGATTACTGATCCCATCTACCCAGGTGGTAGCTTTGATCCCCTTGGATTGGCTGATGATCCAGAGGCATTTGCAGAACTTAAGGTGAAAGAACTTAAGAATGGTCGTCTTGCAATGTTTTCCATGTTCGGGTTTTTCGTACAGGCCATTGTAACAGGAAAAGGTCCTTTGGAGAACCTTGCAGACCATCTTGCTGATCCTGTCAACAACAATGCATGGGCTTATGCTACCAACTTTGTACCTGGAAAGTGA

Protein sequence

MAAMALSSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK*

Homology

[Close]

BLAST of Chy4G079070 vs. ExPASy Swiss-Prot
Match: P08221 (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 9.9e-133
Identity = 227/257 (88.33%), Postives = 238/257 (92.61%), Query Frame = 0


Query: 9   TFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGPFSGEPPSY 68
           T  G+ V L   +  +  ++ N++ TMRK+   + SSGSPWYGPDRVKYLGPFSGEPPSY
Sbjct: 2   TLAGQAVKL---SPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSY 61

Query: 69  LKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA 128
           L GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA
Sbjct: 62  LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEA 121

Query: 129 VWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGPLGEITDPI 188
           VWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAGGPLGE+TDPI
Sbjct: 122 VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPI 181

Query: 189 YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 248
           YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD
Sbjct: 182 YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 241

Query: 249 PVNNNAWAYATNFVPGK 266
           PVNNNAWAYATNFVPGK
Sbjct: 242 PVNNNAWAYATNFVPGK 255

[Close]

BLAST of Chy4G079070 vs. ExPASy Swiss-Prot
Match: P07369 (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB3C PE=3 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 3.8e-132
Identity = 233/267 (87.27%), Postives = 243/267 (91.01%), Query Frame = 0


Query: 2   AAMAL-SSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPA--ASSGSPWYGPDRVKYL 61
           + MAL SSTF GK V L   +  SS +  N RVTMRK+   A  ASSGSPWYGPDRVKYL
Sbjct: 4   STMALSSSTFAGKAVKL---SPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 63

Query: 62  GPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121
           GPFSGE PSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL
Sbjct: 64  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 123

Query: 122 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 181
           +RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA QVVLMGAVEGYRIAG
Sbjct: 124 ARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAG 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 LENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Chy4G079070 vs. ExPASy Swiss-Prot
Match: P27497 (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays OX=4577 GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.1e-131
Identity = 231/268 (86.19%), Postives = 244/268 (91.04%), Query Frame = 0


Query: 2   AAMALSST-FTGKVVPLNAFTELSSSVRSNSRVTMRKS---GKPAASSGSPWYGPDRVKY 61
           + MALSST F GK V       + SS+   +RVTMRK+    KPAASSGSPWYGPDRV Y
Sbjct: 4   STMALSSTAFAGKAV------NVPSSLFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLY 63

Query: 62  LGPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 121
           LGP SGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL
Sbjct: 64  LGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 123

Query: 122 LSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIA 181
           L+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA QVVLMGA+EGYR+A
Sbjct: 124 LARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVA 183

Query: 182 GGPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241
           GGPLGE+ DP+YPGG+FDPLGLADDPEAFA++KVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 184 GGPLGEVVDPLYPGGTFDPLGLADDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKG 243

Query: 242 PLENLADHLADPVNNNAWAYATNFVPGK 266
           PLENLADHLADPVNNNAWAYATNFVPGK
Sbjct: 244 PLENLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy4G079070 vs. ExPASy Swiss-Prot
Match: P09756 (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 PE=3 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 1.4e-131
Identity = 232/265 (87.55%), Postives = 241/265 (90.94%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGP 61
           ++MALSS +  GK V      +L  S     RV+MRK+     SSGSPWYGPDRVKYLGP
Sbjct: 5   SSMALSSPSLAGKAV------KLGPSAPEVGRVSMRKTVTKQVSSGSPWYGPDRVKYLGP 64

Query: 62  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 121
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 65  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 124

Query: 122 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 181
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWA+QV+LMGAVEGYRIAGGP
Sbjct: 125 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGP 184

Query: 182 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 241
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 185 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 244

Query: 242 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLA PVNNNAWAYATNFVPGK
Sbjct: 245 NLADHLAGPVNNNAWAYATNFVPGK 263

[Close]

BLAST of Chy4G079070 vs. ExPASy Swiss-Prot
Match: P27490 (Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum OX=3888 GN=CAB8 PE=1 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 1.9e-131
Identity = 231/267 (86.52%), Postives = 243/267 (91.01%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAFTELSSSVRSNSRVTMRKSG--KPAASSGSPWYGPDRVKYL 61
           ++MALSS T TGK  P+      SS     +R TMRKS   K  ASSGSPWYGPDRVKYL
Sbjct: 4   SSMALSSPTLTGK--PVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYL 63

Query: 62  GPFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL 121
           GPFSGE PSYL GEFPGDYGWDTAGLSADPETF+KNRELEVIHSRWAMLGALGCVFPELL
Sbjct: 64  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 123

Query: 122 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG 181
           SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYRIAG
Sbjct: 124 SRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAG 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE+ DP+YPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHL+DPVNNNAW+YATNFVPGK
Sbjct: 244 LENLADHLSDPVNNNAWSYATNFVPGK 268

[Close]

BLAST of Chy4G079070 vs. ExPASy TrEMBL
Match: A0A0A0LCY3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_3G664560 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 5.4e-150
Identity = 263/265 (99.25%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKVVPLNAFTELSSSVRSN RVTMRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy4G079070 vs. ExPASy TrEMBL
Match: A0A5D3DAB9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00790 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.1e-148
Identity = 260/265 (98.11%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKVVPLNA TELSSSVRSN R++MRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy4G079070 vs. ExPASy TrEMBL
Match: A0A1S3BHH5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489893 PE=3 SV=1)

HSP 1 Score: 533.5 bits (1373), Expect = 5.1e-148
Identity = 260/265 (98.11%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKVVPLNA TELSSSVRSN R++MRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy4G079070 vs. ExPASy TrEMBL
Match: A0A6J1J722 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481846 PE=3 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.3e-146
Identity = 256/265 (96.60%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MA MALSSTFTGK +PLNA TELSSSVRSNSRV+MR+SGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MATMALSSTFTGKAIPLNAPTELSSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  LSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy4G079070 vs. ExPASy TrEMBL
Match: A0A6J1F2S5 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441660 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.1e-146
Identity = 255/265 (96.23%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MA MALSSTFTGK +PLNA TE+SSSVRSNSRV+MR+SGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MATMALSSTFTGKAIPLNAPTEISSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  LSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 266
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy4G079070 vs. NCBI nr
Match: XP_004148579.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN58532.1 hypothetical protein Csa_001702 [Cucumis sativus])

HSP 1 Score: 535 bits (1378), Expect = 8.68e-192
Identity = 263/265 (99.25%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKVVPLNAFTELSSSVRSN RVTMRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNGRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy4G079070 vs. NCBI nr
Match: XP_008447450.1 (PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >KAA0038103.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa] >TYK20505.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 528 bits (1361), Expect = 3.39e-189
Identity = 260/265 (98.11%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGKVVPLNA TELSSSVRSN R++MRKSGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKVVPLNAPTELSSSVRSNGRISMRKSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGV FGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVNFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy4G079070 vs. NCBI nr
Match: XP_038903667.1 (chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida])

HSP 1 Score: 525 bits (1353), Expect = 5.63e-188
Identity = 258/265 (97.36%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MAAMALSSTFTGK VPLNA TELSSSVRSN RV+MR+SGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MAAMALSSTFTGKAVPLNAPTELSSSVRSNGRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy4G079070 vs. NCBI nr
Match: XP_022983188.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima])

HSP 1 Score: 524 bits (1349), Expect = 2.29e-187
Identity = 256/265 (96.60%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MA MALSSTFTGK +PLNA TELSSSVRSNSRV+MR+SGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MATMALSSTFTGKAIPLNAPTELSSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  LSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy4G079070 vs. NCBI nr
Match: XP_022934504.1 (chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata])

HSP 1 Score: 523 bits (1347), Expect = 4.62e-187
Identity = 255/265 (96.23%), Postives = 261/265 (98.49%), Query Frame = 0


Query: 1   MAAMALSSTFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGP 60
           MA MALSSTFTGK +PLNA TE+SSSVRSNSRV+MR+SGKPAASSGSPWYGPDRVKYLGP
Sbjct: 1   MATMALSSTFTGKAIPLNAPTEISSSVRSNSRVSMRRSGKPAASSGSPWYGPDRVKYLGP 60

Query: 61  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120
            SGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR
Sbjct: 61  LSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 120

Query: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180
           NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAGGP 180

Query: 181 LGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLE 240
           LGE+TDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFG+FVQAIVTGKGPLE
Sbjct: 181 LGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGYFVQAIVTGKGPLE 240

Query: 241 NLADHLADPVNNNAWAYATNFVPGK 265
           NLADHLADPVNNNAWAYATNFVPGK
Sbjct: 241 NLADHLADPVNNNAWAYATNFVPGK 265

[Close]

BLAST of Chy4G079070 vs. TAIR 10
Match: AT2G34430.1 (light-harvesting chlorophyll-protein complex II subunit B1 )

HSP 1 Score: 458.8 bits (1179), Expect = 3.1e-129
Identity = 225/266 (84.59%), Postives = 239/266 (89.85%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAFTELSSSVRSNSRVTMRKSGKPAASSGSPWYGPDRVKYLGP 61
           + MALSS   TGK V L   +  +S V    R+TMRK+ KP   SGSPWYG DRVKYLGP
Sbjct: 4   STMALSSPALTGKAVKL---SPAASEVFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGP 63

Query: 62  FSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSR 121
           FSGEPPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+R
Sbjct: 64  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLAR 123

Query: 122 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG-G 181
           NGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG G
Sbjct: 124 NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDG 183

Query: 182 PLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 241
           PLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL
Sbjct: 184 PLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 243

Query: 242 ENLADHLADPVNNNAWAYATNFVPGK 266
           ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 ENLADHLADPVNNNAWAFATNFVPGK 266

[Close]

BLAST of Chy4G079070 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 452.6 bits (1163), Expect = 2.2e-127
Identity = 225/267 (84.27%), Postives = 238/267 (89.14%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAFTELSSSVRSNSRVTMRKS-GKPAASSGSPWYGPDRVKYLG 61
           + MALSS  F GK V        +S V  + RVTMRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAV-----KPAASDVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 62  PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121
           PFSGEPPSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 122 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 181
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGD 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           LENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 LENLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of Chy4G079070 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 451.4 bits (1160), Expect = 4.9e-127
Identity = 224/267 (83.90%), Postives = 239/267 (89.51%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAFTELSSSVRSNSRVTMRKS-GKPAASSGSPWYGPDRVKYLG 61
           + MALSS  F GK V L   +  +S V  + RVTMRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVKL---SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 62  PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 122 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 181
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Chy4G079070 vs. TAIR 10
Match: AT1G29910.1 (chlorophyll A/B binding protein 3 )

HSP 1 Score: 451.1 bits (1159), Expect = 6.4e-127
Identity = 224/267 (83.90%), Postives = 239/267 (89.51%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAFTELSSSVRSNSRVTMRKS-GKPAASSGSPWYGPDRVKYLG 61
           + MALSS  F GK V L   +  +S V  + RVTMRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVNL---SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 62  PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 122 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 181
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 IENLADHLADPVNNNAWAFATNFVPGK 267

[Close]

BLAST of Chy4G079070 vs. TAIR 10
Match: AT1G29920.1 (chlorophyll A/B-binding protein 2 )

HSP 1 Score: 451.1 bits (1159), Expect = 6.4e-127
Identity = 224/267 (83.90%), Postives = 239/267 (89.51%), Query Frame = 0


Query: 2   AAMALSS-TFTGKVVPLNAFTELSSSVRSNSRVTMRKS-GKPAASSGSPWYGPDRVKYLG 61
           + MALSS  F GK V L   +  +S V  + RVTMRK+  KP   SGSPWYG DRVKYLG
Sbjct: 4   STMALSSPAFAGKAVNL---SPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 63

Query: 62  PFSGEPPSYLKGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLS 121
           PFSGE PSYL GEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPELL+
Sbjct: 64  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 123

Query: 122 RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWASQVVLMGAVEGYRIAG- 181
           RNGVKFGEAVWFKAGSQIFS+GGLDYLGNPSL+HAQSILAIWA+QV+LMGAVEGYR+AG 
Sbjct: 124 RNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGN 183

Query: 182 GPLGEITDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 241
           GPLGE  D +YPGGSFDPLGLA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 184 GPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 243

Query: 242 LENLADHLADPVNNNAWAYATNFVPGK 266
           +ENLADHLADPVNNNAWA+ATNFVPGK
Sbjct: 244 IENLADHLADPVNNNAWAFATNFVPGK 267

The following BLAST results are available for this feature:

BLAST of Chy4G079070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08221	9.9e-133	88.33	Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cuc...	[more]
P07369	3.8e-132	87.27	Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum OX=408...	[more]
P27497	1.1e-131	86.19	Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays OX=4577 GN=CAB-M9 ...	[more]
P09756	1.4e-131	87.55	Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max OX=3847 GN=CAB3 ...	[more]
P27490	1.9e-131	86.52	Chlorophyll a-b binding protein 8, chloroplastic OS=Pisum sativum OX=3888 GN=CAB...	[more]

BLAST of Chy4G079070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCY3	5.4e-150	99.25	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A5D3DAB9	5.1e-148	98.11	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3BHH5	5.1e-148	98.11	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1J722	1.3e-146	96.60	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1F2S5	2.1e-146	96.23	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Chy4G079070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148579.1	8.68e-192	99.25	chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus] >KGN58532...	[more]
XP_008447450.1	3.39e-189	98.11	PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo] >...	[more]
XP_038903667.1	5.63e-188	97.36	chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]	[more]
XP_022983188.1	2.29e-187	96.60	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita maxima]	[more]
XP_022934504.1	4.62e-187	96.23	chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata]	[more]

BLAST of Chy4G079070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G34430.1	3.1e-129	84.59	light-harvesting chlorophyll-protein complex II subunit B1	[more]
AT2G34420.1	2.2e-127	84.27	photosystem II light harvesting complex gene B1B2	[more]
AT1G29930.1	4.9e-127	83.90	chlorophyll A/B binding protein 1	[more]
AT1G29910.1	6.4e-127	83.90	chlorophyll A/B binding protein 3	[more]
AT1G29920.1	6.4e-127	83.90	chlorophyll A/B-binding protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 56..258 e-value: 1.8E-90 score: 304.2
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 65..231 e-value: 2.5E-49 score: 167.9
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 2..265
None	No IPR available	PANTHER	PTHR21649:SF97	CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC	coord: 2..265
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 48..262

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G079070.1	Chy4G079070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding