Chy4G078270 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G078270
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Eisosome protein SEG2
Location	chrH04: 17174036 .. 17175638 (+)
RNA-Seq Expression	Chy4G078270
Synteny	Chy4G078270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGTTTCATTGCTTGTTTTCGCTCTTCCACTGATGTTAACAAGCGTAGGAAACAGAGGCGCCGCAAGGTTTTGCCTCGAGAACAAACTGTAATTTATCTTCTCCTTTTCCCTTCCATGATGTTTTTGTTTCTTATATACTCATTTCTTCTCTATTCTAGCTTTTATTTCCATGATTCCCATTGTATCAACTTCTTTGCTTTCTCCAAGTTTAGTCAAGTAGAGCTCTAACAAGTGAACTTCCCATTTGAGGTTGAGACTGACGTTTGACTTTTACTGTAGCCTAATGCGGTCTCCCAGCTTGTTCAGGTCTCACCATCTACTGTAGACACTGCTTCTGATAGATCCATTAGTCCAATTCTAAAAGCTCGGTGAGCATCAAACAAGAAATTAACCCCTTCCCTCCCCCCCGTCTCCCTGTTTTCTTTGAGCACATGGTTTTCTTTTTAGTGTTTGGTAGGTTCTTAAGTTTTTGGGTTTTGTGTGTAGGGATAGGCGTGAGGAGCAACTAAATCTGGGTACTAGAAAAAGAGTAACATTTGATTCCAATGTAAAGACATATGAAGTTGAAGATGTTGAAGTTGAAGTTGAAGCTGAAGCCAAAGCCGAAGCTGAAGATGATACTTTTTTTGGAACAGGTAACAAGGAGGAGAAGGGCTTGGCTGAAATACCCCAATCCCAGTGCAAATCATACTCTGGCGAGGGGTCTACTGTTTCCAGCATTTCGTCTTACCCTCCCAATCATAGGTACCAGAATTGTAGAGATAGTGATGATGAAGATGAATTGGATTATGCTGATAGTGATCTTGATCATGATCATGTTGACACTGATGTTGATGATGATGATGATGTTGTGGATGAAGAGTATGACAATGACTTTGATGATGAAGATGAATTAATAGAATCAAATGATAAAAATTCTTCTGATCAAGTGTTTGCTGATGAGGTTGATAGCTGTTTGTCAGTTTGTGGGTGTCCTGGAAAGACTGAACCTCAAATCGGGGTGAGACGGACTGCTCGAGATAGGAATGCCTGTGTTCATTCTGTGTTGAAGCCTGTGGAAAATATCTCACAGTGGAAGGCAGTTAAAGTCAAGGATAAACATCGGTCGAATCCTCCTTCTTGTAAAGAGAATATGGCTTTAAATGGAGCTGCTAGGAGTTCTCTGACAGAGCCTAGTTTCAAGAAATCATCTTTTGGTTATAAGTCCAAAAGTTGCCAACCTAAGAGGTCAGATCAAGACATAGCTGTTGATGCCAGCCTTTCAAATTGGTTGAGTTCATCAGAATTTACACCTCCAAGCAAGATTAGCACAGGCATTTCAGTTCTTCCAACACCAGAGTCACAAGGATCAAATTCACCTAAAAGTGAAGAAGATAGGCCAATTTTGGGGCCCTTAACTATGGAGGAACTCAAACAGTTTTCAACTACACCTTCTCCAAGAAAGTCGCCAAATAGAAGTGCCGACGATATGCCAATCATTGGGACGGTTGGCACATATTGGAGCCACTCTGATTCTGTTGAGGATTCTGGATTAGCGTCTTCTTTTAAAAGAGTGCCAAATACCAGTAGCAACTTTAGAGAAATGCGTGTGAAATAA

mRNA sequence

ATGGGTTGTTTCATTGCTTGTTTTCGCTCTTCCACTGATGTTAACAAGCGTAGGAAACAGAGGCGCCGCAAGGTTTTGCCTCGAGAACAAACTCCTAATGCGGTCTCCCAGCTTGTTCAGGTCTCACCATCTACTGTAGACACTGCTTCTGATAGATCCATTAGTCCAATTCTAAAAGCTCGGGATAGGCGTGAGGAGCAACTAAATCTGGGTAACAAGGAGGAGAAGGGCTTGGCTGAAATACCCCAATCCCAGTGCAAATCATACTCTGGCGAGGGGTCTACTGTTTCCAGCATTTCGTCTTACCCTCCCAATCATAGCTGTTTGTCAGTTTGTGGGTGTCCTGGAAAGACTGAACCTCAAATCGGGGTGAGACGGACTGCTCGAGATAGGAATGCCTGTGTTCATTCTGTGTTGAAGCCTGTGGAAAATATCTCACAGTGGAAGGCAGTTAAAGTCAAGGATAAACATCGGTCGAATCCTCCTTCTTGTAAAGAGAATATGGCTTTAAATGGAGCTGCTAGGAGTTCTCTGACAGAGCCTAGTTTCAAGAAATCATCTTTTGGTTATAAGTCCAAAAGTTGCCAACCTAAGAGGTCAGATCAAGACATAGCTGTTGATGCCAGCCTTTCAAATTGGTTGAGTTCATCAGAATTTACACCTCCAAGCAAGATTAGCACAGGCATTTCAGTTCTTCCAACACCAGAGTCACAAGGATCAAATTCACCTAAAAGTGAAGAAGATAGGCCAATTTTGGGGCCCTTAACTATGGAGGAACTCAAACAGTTTTCAACTACACCTTCTCCAAGAAAGTCGCCAAATAGAAGTGCCGACGATATGCCAATCATTGGGACGGTTGGCACATATTGGAGCCACTCTGATTCTGTTGAGGATTCTGGATTAGCGTCTTCTTTTAAAAGAGTGCCAAATACCAGTAGCAACTTTAGAGAAATGCGTGTGAAATAA

Coding sequence (CDS)

ATGGGTTGTTTCATTGCTTGTTTTCGCTCTTCCACTGATGTTAACAAGCGTAGGAAACAGAGGCGCCGCAAGGTTTTGCCTCGAGAACAAACTCCTAATGCGGTCTCCCAGCTTGTTCAGGTCTCACCATCTACTGTAGACACTGCTTCTGATAGATCCATTAGTCCAATTCTAAAAGCTCGGGATAGGCGTGAGGAGCAACTAAATCTGGGTAACAAGGAGGAGAAGGGCTTGGCTGAAATACCCCAATCCCAGTGCAAATCATACTCTGGCGAGGGGTCTACTGTTTCCAGCATTTCGTCTTACCCTCCCAATCATAGCTGTTTGTCAGTTTGTGGGTGTCCTGGAAAGACTGAACCTCAAATCGGGGTGAGACGGACTGCTCGAGATAGGAATGCCTGTGTTCATTCTGTGTTGAAGCCTGTGGAAAATATCTCACAGTGGAAGGCAGTTAAAGTCAAGGATAAACATCGGTCGAATCCTCCTTCTTGTAAAGAGAATATGGCTTTAAATGGAGCTGCTAGGAGTTCTCTGACAGAGCCTAGTTTCAAGAAATCATCTTTTGGTTATAAGTCCAAAAGTTGCCAACCTAAGAGGTCAGATCAAGACATAGCTGTTGATGCCAGCCTTTCAAATTGGTTGAGTTCATCAGAATTTACACCTCCAAGCAAGATTAGCACAGGCATTTCAGTTCTTCCAACACCAGAGTCACAAGGATCAAATTCACCTAAAAGTGAAGAAGATAGGCCAATTTTGGGGCCCTTAACTATGGAGGAACTCAAACAGTTTTCAACTACACCTTCTCCAAGAAAGTCGCCAAATAGAAGTGCCGACGATATGCCAATCATTGGGACGGTTGGCACATATTGGAGCCACTCTGATTCTGTTGAGGATTCTGGATTAGCGTCTTCTTTTAAAAGAGTGCCAAATACCAGTAGCAACTTTAGAGAAATGCGTGTGAAATAA

Protein sequence

MGCFIACFRSSTDVNKRRKQRRRKVLPREQTPNAVSQLVQVSPSTVDTASDRSISPILKARDRREEQLNLGNKEEKGLAEIPQSQCKSYSGEGSTVSSISSYPPNHSCLSVCGCPGKTEPQIGVRRTARDRNACVHSVLKPVENISQWKAVKVKDKHRSNPPSCKENMALNGAARSSLTEPSFKKSSFGYKSKSCQPKRSDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILGPLTMEELKQFSTTPSPRKSPNRSADDMPIIGTVGTYWSHSDSVEDSGLASSFKRVPNTSSNFREMRVK*

Homology

[Close]

BLAST of Chy4G078270 vs. ExPASy TrEMBL
Match: A0A5A7T4Q3 (Eisosome protein SEG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001580 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 2.4e-160
Identity = 305/358 (85.20%), Postives = 310/358 (86.59%), Query Frame = 0


Query: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTPNAVSQLVQVSPSTVDTASDRSISPILKA 60
           MGCFIACFRSSTDVNKRRKQRRRKVLPREQT NAVSQLVQVSPSTVDTASDRSISPILKA
Sbjct: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTANAVSQLVQVSPSTVDTASDRSISPILKA 60

Query: 61  RDRREEQLNL-------------------------------------GNKEEKGLAEIPQ 120
           RDRREEQLN+                                     GNKEEK LAEIPQ
Sbjct: 61  RDRREEQLNVSTRKRVTFDSNVKTYELEDVEAEAEAGAEGDAFLGKDGNKEEKDLAEIPQ 120

Query: 121 SQCKSYSGEGSTVSSISSYPPNHSCLSVCGCPGKTEPQIGVRRTARDRNACVHSVLKPVE 180
           SQCKSYSGEGSTVSSISSYPPNHSCLSVCGCP KTEPQIGVRRT RDRNACVHSVLKPVE
Sbjct: 121 SQCKSYSGEGSTVSSISSYPPNHSCLSVCGCPEKTEPQIGVRRTTRDRNACVHSVLKPVE 180

Query: 181 NISQWKAVKVKDKHRSNPPSCKENMALNGAARSSLTEPSFKKSSFGYKSKSCQPKRSDQD 240
           NISQWKAVKVKDKH SNPPS KEN+ALNG ARSSLTEPSFKKSSFGYKSKSCQPK SDQD
Sbjct: 181 NISQWKAVKVKDKHPSNPPSYKENLALNGGARSSLTEPSFKKSSFGYKSKSCQPKSSDQD 240

Query: 241 IAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILGPLTMEELKQF 300
           IAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILG LTMEELKQF
Sbjct: 241 IAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILGALTMEELKQF 300

Query: 301 STTPSPRKSPNRSADDMPIIGTVGTYWSHSDSVEDSGLASSFKRVPNTSSNFREMRVK 322
           STT SPR+SPNRSA+D+PIIGTVGTYWSHSDSVEDSGLASSFKRVPNTSSNFR MRVK
Sbjct: 301 STTTSPRRSPNRSANDIPIIGTVGTYWSHSDSVEDSGLASSFKRVPNTSSNFRGMRVK 358

[Close]

BLAST of Chy4G078270 vs. ExPASy TrEMBL
Match: A0A0A0LBG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608680 PE=4 SV=1)

HSP 1 Score: 552.4 bits (1422), Expect = 1.3e-153
Identity = 307/427 (71.90%), Postives = 314/427 (73.54%), Query Frame = 0


Query: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTPNAVSQLVQVSPSTVDTASDRSISPILKA 60
           MGCFIACFRSSTD+NKRRKQRRRKVLPR+QT NAVSQLVQVSPST+DTASDRSISPILKA
Sbjct: 1   MGCFIACFRSSTDLNKRRKQRRRKVLPRQQTANAVSQLVQVSPSTLDTASDRSISPILKA 60

Query: 61  RDRREEQLNL-----------------------------------------GNKEEKGLA 120
           RDRREEQLN                                          GNKEEK LA
Sbjct: 61  RDRREEQLNPSTRKRVTFDSNVKTYELEDVEVEAEAEAEAKAGGDTFFGTDGNKEEKCLA 120

Query: 121 EIPQSQCKSYSGEGSTVSSISSYPPNH--------------------------------- 180
           EIPQSQCKSYSGEGSTVSSISSYPPNH                                 
Sbjct: 121 EIPQSQCKSYSGEGSTVSSISSYPPNHRYQNCRDSDDEDELDYADSDLVDTDVDDDDDVV 180

Query: 181 --------------------------------SCLSVCGCPGKTEPQIGVRRTARDRNAC 240
                                           SCLSVCGCPGKTEPQIG+RRTARDRNAC
Sbjct: 181 DEEYDNDFDDEDELIESSDKNSSDQVFADEVDSCLSVCGCPGKTEPQIGLRRTARDRNAC 240

Query: 241 VHSVLKPVENISQWKAVKVKDKHRSNPPSCKENMALNGAARSSLTEPSFKKSSFGYKSKS 300
           VHSVLKPVENISQWKAVKVKDK RSNPPSCKENMALNGAARSS+TEPSFKKSSFGYKSKS
Sbjct: 241 VHSVLKPVENISQWKAVKVKDKLRSNPPSCKENMALNGAARSSVTEPSFKKSSFGYKSKS 300

Query: 301 CQPKRSDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILGP 322
           CQPK SDQDIAVDASLSNWLSSSEFTPPSKISTGIS+LPTPESQGSNSPKSEEDRPILG 
Sbjct: 301 CQPKSSDQDIAVDASLSNWLSSSEFTPPSKISTGISLLPTPESQGSNSPKSEEDRPILGA 360

[Close]

BLAST of Chy4G078270 vs. ExPASy TrEMBL
Match: A0A1S3BHB7 (eisosome protein SEG2 OS=Cucumis melo OX=3656 GN=LOC103489846 PE=4 SV=1)

HSP 1 Score: 543.5 bits (1399), Expect = 5.9e-151
Identity = 305/428 (71.26%), Postives = 310/428 (72.43%), Query Frame = 0


Query: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTPNAVSQLVQVSPSTVDTASDRSISPILKA 60
           MGCFIACFRSSTDVNKRRKQRRRKVLPREQT NAVSQLVQVSPSTVDTASDRSISPILKA
Sbjct: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTANAVSQLVQVSPSTVDTASDRSISPILKA 60

Query: 61  RDRREEQLNL-------------------------------------GNKEEKGLAEIPQ 120
           RDRREEQLN+                                     GNKEEK LAEIPQ
Sbjct: 61  RDRREEQLNVSTRKRVTFDSNVKTYELEDVEAEAEAGAEGDAFLGKDGNKEEKDLAEIPQ 120

Query: 121 SQCKSYSGEGSTVSSISSYPPNH------------------------------------- 180
           SQCKSYSGEGSTVSSISSYPPNH                                     
Sbjct: 121 SQCKSYSGEGSTVSSISSYPPNHRYQNCRDSDDEDELDYADSDFDHDHVDTDVDDDDDDV 180

Query: 181 ---------------------------------SCLSVCGCPGKTEPQIGVRRTARDRNA 240
                                            SCLSVCGCP KTEPQIGVRRT RDRNA
Sbjct: 181 EDEEYDNDFDDEDELIESSDKNSSDQVFADEVDSCLSVCGCPEKTEPQIGVRRTTRDRNA 240

Query: 241 CVHSVLKPVENISQWKAVKVKDKHRSNPPSCKENMALNGAARSSLTEPSFKKSSFGYKSK 300
           CVHSVLKPVENISQWKAVKVKDKH SNPPS KEN+ALNG ARSSLTEPSFKKSSFGYKSK
Sbjct: 241 CVHSVLKPVENISQWKAVKVKDKHPSNPPSYKENLALNGGARSSLTEPSFKKSSFGYKSK 300

Query: 301 SCQPKRSDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILG 322
           SCQPK SDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILG
Sbjct: 301 SCQPKSSDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILG 360

[Close]

BLAST of Chy4G078270 vs. ExPASy TrEMBL
Match: A0A6J1EYL2 (uncharacterized protein LOC111437397 OS=Cucurbita moschata OX=3662 GN=LOC111437397 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.6e-116
Identity = 262/420 (62.38%), Postives = 277/420 (65.95%), Query Frame = 0


Query: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTPNAVSQLVQVSPSTVDTASDRSISPILKA 60
           MGCFIACFRSS DV KRR+QRRRKVLPR Q  NA+S+ VQ SPS VD ASDRS SPILKA
Sbjct: 1   MGCFIACFRSSDDV-KRREQRRRKVLPRIQA-NAISKHVQTSPSAVDNASDRSTSPILKA 60

Query: 61  RDRREE-QLN---------------------------------LGNKEEKGLAEIPQSQC 120
           RDR EE QL+                                  G KEEK LA I  SQC
Sbjct: 61  RDRPEELQLSPTTRKRVTFDSNVKTYELDHVEAEAEADVLLEREGYKEEKELAGI--SQC 120

Query: 121 KSYSGEGSTVSSISSYPPNH---------------------------------------- 180
           KS S +GSTVSSISSYPPNH                                        
Sbjct: 121 KSRSEDGSTVSSISSYPPNHRYQNYRESDDDDEELDYADSDLDHDHVDDGDGDENDDIEY 180

Query: 181 ------------------------SCLSVCGCPGKTEPQIGVRRTARDRNACVHSVLKPV 240
                                   SCLSVCGCPGK EPQIG RRTARDRNACVHSVLKPV
Sbjct: 181 EEYDHFSDDESGSSSVQVFADEVDSCLSVCGCPGKAEPQIGARRTARDRNACVHSVLKPV 240

Query: 241 ENISQWKAVKVKDKHRSNPPSCKENMALNGAARSSL-TEPSFKKSSFGYKSKSCQPKRSD 300
           ENISQWKAVKVKDKHRSNPPS KEN+ALNGA RSS  TEPSFK+SSFG KSK+CQPK SD
Sbjct: 241 ENISQWKAVKVKDKHRSNPPSHKENLALNGAPRSSYGTEPSFKESSFGCKSKTCQPKNSD 300

Query: 301 QDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILGPLTMEELK 322
           Q IAVDASLSNWLSSS  TPPSK STGI  L TPESQGSNSPK++EDRPILG LTMEEL+
Sbjct: 301 QGIAVDASLSNWLSSSVTTPPSKTSTGILGLTTPESQGSNSPKNQEDRPILGALTMEELR 360

[Close]

BLAST of Chy4G078270 vs. ExPASy TrEMBL
Match: A0A6J1K1W2 (eisosome protein SEG2-like OS=Cucurbita maxima OX=3661 GN=LOC111491653 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 3.0e-110
Identity = 253/417 (60.67%), Postives = 271/417 (64.99%), Query Frame = 0


Query: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTPNAVSQLVQVSPSTVDTASDRSISPILKA 60
           MGCF ACFRSS DV KRR+QRRRKVLPR +  NA+S+ VQ SPS VD ASDRS SPILKA
Sbjct: 1   MGCFTACFRSSDDV-KRREQRRRKVLPRIKA-NAISKPVQTSPSAVDNASDRSTSPILKA 60

Query: 61  RDRREE-QLN-----------------------------LGNKEEKGLAEIPQSQCKSYS 120
           RDR EE QL+                              G KEEK LA I  SQCKS S
Sbjct: 61  RDRPEELQLSPTTRKRVTFDSNVKTYELDQVETDVLLEKEGYKEEKELAGI--SQCKSRS 120

Query: 121 GEGSTVSSISSYPPNH-------------------------------------------- 180
            +GSTVS ISSYPPNH                                            
Sbjct: 121 EDGSTVSCISSYPPNHRYQNYRESDDDDEEELDYADSDLDHDHVDDDDGDENDDIEDEEY 180

Query: 181 ---------------------SCLSVCGCPGKTEPQIGVRRTARDRNACVHSVLKPVENI 240
                                SCLSVCGCPGK EPQIG RRTARDRNACVHSVLKPVENI
Sbjct: 181 DHFSEDESGSSSAQVFADEADSCLSVCGCPGKAEPQIGARRTARDRNACVHSVLKPVENI 240

Query: 241 SQWKAVKVKDKHRSNPPSCKENMALNGAARSSL-TEPSFKKSSFGYKSKSCQPKRSDQDI 300
           SQWKAVKVKDKHRSN P  KEN+ALNGA   S   EPSFK+SSFG KSK+CQPK+SDQ I
Sbjct: 241 SQWKAVKVKDKHRSNSPH-KENLALNGAPGCSFGIEPSFKESSFGCKSKTCQPKKSDQGI 300

Query: 301 AVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILGPLTMEELKQFS 322
           AVDASLSNWLSSS  TPPSK STGI  L TPESQGSNSPK++EDRPILG LTMEEL+QFS
Sbjct: 301 AVDASLSNWLSSSVTTPPSKTSTGILGLTTPESQGSNSPKNQEDRPILGALTMEELRQFS 360

[Close]

BLAST of Chy4G078270 vs. NCBI nr
Match: KAA0037973.1 (eisosome protein SEG2 [Cucumis melo var. makuwa])

HSP 1 Score: 576 bits (1485), Expect = 1.26e-205
Identity = 305/358 (85.20%), Postives = 310/358 (86.59%), Query Frame = 0


Query: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTPNAVSQLVQVSPSTVDTASDRSISPILKA 60
           MGCFIACFRSSTDVNKRRKQRRRKVLPREQT NAVSQLVQVSPSTVDTASDRSISPILKA
Sbjct: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTANAVSQLVQVSPSTVDTASDRSISPILKA 60

Query: 61  RDRREEQLNL-------------------------------------GNKEEKGLAEIPQ 120
           RDRREEQLN+                                     GNKEEK LAEIPQ
Sbjct: 61  RDRREEQLNVSTRKRVTFDSNVKTYELEDVEAEAEAGAEGDAFLGKDGNKEEKDLAEIPQ 120

Query: 121 SQCKSYSGEGSTVSSISSYPPNHSCLSVCGCPGKTEPQIGVRRTARDRNACVHSVLKPVE 180
           SQCKSYSGEGSTVSSISSYPPNHSCLSVCGCP KTEPQIGVRRT RDRNACVHSVLKPVE
Sbjct: 121 SQCKSYSGEGSTVSSISSYPPNHSCLSVCGCPEKTEPQIGVRRTTRDRNACVHSVLKPVE 180

Query: 181 NISQWKAVKVKDKHRSNPPSCKENMALNGAARSSLTEPSFKKSSFGYKSKSCQPKRSDQD 240
           NISQWKAVKVKDKH SNPPS KEN+ALNG ARSSLTEPSFKKSSFGYKSKSCQPK SDQD
Sbjct: 181 NISQWKAVKVKDKHPSNPPSYKENLALNGGARSSLTEPSFKKSSFGYKSKSCQPKSSDQD 240

Query: 241 IAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILGPLTMEELKQF 300
           IAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILG LTMEELKQF
Sbjct: 241 IAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILGALTMEELKQF 300

Query: 301 STTPSPRKSPNRSADDMPIIGTVGTYWSHSDSVEDSGLASSFKRVPNTSSNFREMRVK 321
           STT SPR+SPNRSA+D+PIIGTVGTYWSHSDSVEDSGLASSFKRVPNTSSNFR MRVK
Sbjct: 301 STTTSPRRSPNRSANDIPIIGTVGTYWSHSDSVEDSGLASSFKRVPNTSSNFRGMRVK 358

[Close]

BLAST of Chy4G078270 vs. NCBI nr
Match: XP_004152060.1 (eisosome protein SEG2 [Cucumis sativus] >KGN58289.1 hypothetical protein Csa_017575 [Cucumis sativus])

HSP 1 Score: 554 bits (1427), Expect = 1.04e-195
Identity = 307/427 (71.90%), Postives = 314/427 (73.54%), Query Frame = 0


Query: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTPNAVSQLVQVSPSTVDTASDRSISPILKA 60
           MGCFIACFRSSTD+NKRRKQRRRKVLPR+QT NAVSQLVQVSPST+DTASDRSISPILKA
Sbjct: 1   MGCFIACFRSSTDLNKRRKQRRRKVLPRQQTANAVSQLVQVSPSTLDTASDRSISPILKA 60

Query: 61  RDRREEQLNL-----------------------------------------GNKEEKGLA 120
           RDRREEQLN                                          GNKEEK LA
Sbjct: 61  RDRREEQLNPSTRKRVTFDSNVKTYELEDVEVEAEAEAEAKAGGDTFFGTDGNKEEKCLA 120

Query: 121 EIPQSQCKSYSGEGSTVSSISSYPPNH--------------------------------- 180
           EIPQSQCKSYSGEGSTVSSISSYPPNH                                 
Sbjct: 121 EIPQSQCKSYSGEGSTVSSISSYPPNHRYQNCRDSDDEDELDYADSDLVDTDVDDDDDVV 180

Query: 181 --------------------------------SCLSVCGCPGKTEPQIGVRRTARDRNAC 240
                                           SCLSVCGCPGKTEPQIG+RRTARDRNAC
Sbjct: 181 DEEYDNDFDDEDELIESSDKNSSDQVFADEVDSCLSVCGCPGKTEPQIGLRRTARDRNAC 240

Query: 241 VHSVLKPVENISQWKAVKVKDKHRSNPPSCKENMALNGAARSSLTEPSFKKSSFGYKSKS 300
           VHSVLKPVENISQWKAVKVKDK RSNPPSCKENMALNGAARSS+TEPSFKKSSFGYKSKS
Sbjct: 241 VHSVLKPVENISQWKAVKVKDKLRSNPPSCKENMALNGAARSSVTEPSFKKSSFGYKSKS 300

Query: 301 CQPKRSDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILGP 321
           CQPK SDQDIAVDASLSNWLSSSEFTPPSKISTGIS+LPTPESQGSNSPKSEEDRPILG 
Sbjct: 301 CQPKSSDQDIAVDASLSNWLSSSEFTPPSKISTGISLLPTPESQGSNSPKSEEDRPILGA 360

[Close]

BLAST of Chy4G078270 vs. NCBI nr
Match: XP_008447385.1 (PREDICTED: eisosome protein SEG2 [Cucumis melo])

HSP 1 Score: 545 bits (1404), Expect = 3.41e-192
Identity = 305/428 (71.26%), Postives = 310/428 (72.43%), Query Frame = 0


Query: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTPNAVSQLVQVSPSTVDTASDRSISPILKA 60
           MGCFIACFRSSTDVNKRRKQRRRKVLPREQT NAVSQLVQVSPSTVDTASDRSISPILKA
Sbjct: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTANAVSQLVQVSPSTVDTASDRSISPILKA 60

Query: 61  RDRREEQLNL-------------------------------------GNKEEKGLAEIPQ 120
           RDRREEQLN+                                     GNKEEK LAEIPQ
Sbjct: 61  RDRREEQLNVSTRKRVTFDSNVKTYELEDVEAEAEAGAEGDAFLGKDGNKEEKDLAEIPQ 120

Query: 121 SQCKSYSGEGSTVSSISSYPPNH------------------------------------- 180
           SQCKSYSGEGSTVSSISSYPPNH                                     
Sbjct: 121 SQCKSYSGEGSTVSSISSYPPNHRYQNCRDSDDEDELDYADSDFDHDHVDTDVDDDDDDV 180

Query: 181 ---------------------------------SCLSVCGCPGKTEPQIGVRRTARDRNA 240
                                            SCLSVCGCP KTEPQIGVRRT RDRNA
Sbjct: 181 EDEEYDNDFDDEDELIESSDKNSSDQVFADEVDSCLSVCGCPEKTEPQIGVRRTTRDRNA 240

Query: 241 CVHSVLKPVENISQWKAVKVKDKHRSNPPSCKENMALNGAARSSLTEPSFKKSSFGYKSK 300
           CVHSVLKPVENISQWKAVKVKDKH SNPPS KEN+ALNG ARSSLTEPSFKKSSFGYKSK
Sbjct: 241 CVHSVLKPVENISQWKAVKVKDKHPSNPPSYKENLALNGGARSSLTEPSFKKSSFGYKSK 300

Query: 301 SCQPKRSDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILG 321
           SCQPK SDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILG
Sbjct: 301 SCQPKSSDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPILG 360

[Close]

BLAST of Chy4G078270 vs. NCBI nr
Match: XP_038887467.1 (uncharacterized protein LOC120077603 isoform X1 [Benincasa hispida])

HSP 1 Score: 501 bits (1290), Expect = 7.97e-175
Identity = 284/430 (66.05%), Postives = 298/430 (69.30%), Query Frame = 0


Query: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTPNAVSQLVQVSPSTVDTASDRSISPILKA 60
           MGCFIACFRSS+DVNK RKQRRRKVLPREQ  NAVSQLVQVSPSTVD+ASDRSISPILKA
Sbjct: 1   MGCFIACFRSSSDVNKHRKQRRRKVLPREQAANAVSQLVQVSPSTVDSASDRSISPILKA 60

Query: 61  RDRREEQLNLGN----------------------------------KEEKGLAEIPQSQC 120
           RDR EEQLNL                                    KEEK LAEI QSQC
Sbjct: 61  RDRPEEQLNLSTRKRVTFDSNVKTYELDDVEAEAEADAFLEKDSNKKEEKDLAEISQSQC 120

Query: 121 KSYSGEGSTVSSISSYPPNH---------------------------------------- 180
           KSYS EGSTVSS+SSYPPNH                                        
Sbjct: 121 KSYSEEGSTVSSVSSYPPNHRYQNCRDSDDEDELDYADSDLDHDHVDTDEDGDDENDYDV 180

Query: 181 ----------------------------------SCLSVCGCPGKTEPQIGVRRTARDRN 240
                                             SCLSVCGCPGKTEPQ GVRRTARDRN
Sbjct: 181 VEDEEYDNYYDDEDGIRESSEKNSADQVFADEVDSCLSVCGCPGKTEPQNGVRRTARDRN 240

Query: 241 ACVHSVLKPVENISQWKAVKVKDKHRSNPPSCKENMALNGAARSSL-TEPSFKKSSFGYK 300
           ACVHSVLKPVENISQWKAVK+KDKHRSNPP CKEN+AL+GA R S  TEPSFKKSSFG+K
Sbjct: 241 ACVHSVLKPVENISQWKAVKIKDKHRSNPPPCKENLALSGAPRRSFGTEPSFKKSSFGHK 300

Query: 301 SKSCQPKRSDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPI 321
           SK+CQP  SDQ+IAVDASLSNWLSSSE TPPSK STGISVLPTPESQGSNSPKS+EDRPI
Sbjct: 301 SKTCQPTSSDQEIAVDASLSNWLSSSEVTPPSKTSTGISVLPTPESQGSNSPKSQEDRPI 360

[Close]

BLAST of Chy4G078270 vs. NCBI nr
Match: XP_038887468.1 (uncharacterized protein LOC120077603 isoform X2 [Benincasa hispida])

HSP 1 Score: 480 bits (1236), Expect = 9.39e-167
Identity = 276/430 (64.19%), Postives = 290/430 (67.44%), Query Frame = 0


Query: 1   MGCFIACFRSSTDVNKRRKQRRRKVLPREQTPNAVSQLVQVSPSTVDTASDRSISPILKA 60
           MGCFIACFRSS+DVNK RKQRRRKVLPREQ          VSPSTVD+ASDRSISPILKA
Sbjct: 1   MGCFIACFRSSSDVNKHRKQRRRKVLPREQA---------VSPSTVDSASDRSISPILKA 60

Query: 61  RDRREEQLNLGN----------------------------------KEEKGLAEIPQSQC 120
           RDR EEQLNL                                    KEEK LAEI QSQC
Sbjct: 61  RDRPEEQLNLSTRKRVTFDSNVKTYELDDVEAEAEADAFLEKDSNKKEEKDLAEISQSQC 120

Query: 121 KSYSGEGSTVSSISSYPPNH---------------------------------------- 180
           KSYS EGSTVSS+SSYPPNH                                        
Sbjct: 121 KSYSEEGSTVSSVSSYPPNHRYQNCRDSDDEDELDYADSDLDHDHVDTDEDGDDENDYDV 180

Query: 181 ----------------------------------SCLSVCGCPGKTEPQIGVRRTARDRN 240
                                             SCLSVCGCPGKTEPQ GVRRTARDRN
Sbjct: 181 VEDEEYDNYYDDEDGIRESSEKNSADQVFADEVDSCLSVCGCPGKTEPQNGVRRTARDRN 240

Query: 241 ACVHSVLKPVENISQWKAVKVKDKHRSNPPSCKENMALNGAARSSL-TEPSFKKSSFGYK 300
           ACVHSVLKPVENISQWKAVK+KDKHRSNPP CKEN+AL+GA R S  TEPSFKKSSFG+K
Sbjct: 241 ACVHSVLKPVENISQWKAVKIKDKHRSNPPPCKENLALSGAPRRSFGTEPSFKKSSFGHK 300

Query: 301 SKSCQPKRSDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPKSEEDRPI 321
           SK+CQP  SDQ+IAVDASLSNWLSSSE TPPSK STGISVLPTPESQGSNSPKS+EDRPI
Sbjct: 301 SKTCQPTSSDQEIAVDASLSNWLSSSEVTPPSKTSTGISVLPTPESQGSNSPKSQEDRPI 360

[Close]

BLAST of Chy4G078270 vs. TAIR 10
Match: AT1G04030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44040.1); Has 1835 Blast hits to 1511 proteins in 238 species: Archae - 7; Bacteria - 164; Metazoa - 377; Fungi - 135; Plants - 187; Viruses - 22; Other Eukaryotes - 943 (source: NCBI BLink). )

HSP 1 Score: 126.3 bits (316), Expect = 4.4e-29
Identity = 90/206 (43.69%), Postives = 120/206 (58.25%), Query Frame = 0


Query: 127 TARDRNAC-VHSVLKPVENISQWKAVKVKDKHRSNPPSCKEN---MALNGAARSSL---T 186
           T RD N      VL PVEN++QWK+ K K + +    S KEN   +A     R S    T
Sbjct: 208 TVRDGNHYDGQGVLNPVENLTQWKSAKSKGRTKQK-QSQKENSNFIADQEEKRDSSSFGT 267

Query: 187 EPSFKKSSFGYKSK-SCQPKR-SDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPES 246
           +P     +   K K   +PK+  +Q++AVDASLS WLS+SE    S+ ++      TPE 
Sbjct: 268 DPQIDDITLSVKPKCRIEPKKLRNQELAVDASLSTWLSTSE--SGSECNSASMYTLTPEK 327

Query: 247 QGSNSPKSE------EDRPILGPLTMEELKQFSTTPSPRKSPNRSADDMPIIGTVGTYWS 306
             S S  S+      +DRP+L  LT+E++KQFS T +PRKSP++S D+ PIIGTVG YW 
Sbjct: 328 LKSTSCYSKPLRINHDDRPVLCALTLEDIKQFSATSTPRKSPSKSPDETPIIGTVGGYWG 387

Query: 307 HSDSVEDSGLASSFKRVPNTSSNFRE 318
           +     D G ASSFK +PNTSS +RE
Sbjct: 388 NRSKAIDCGSASSFKGIPNTSSKYRE 410

[Close]

BLAST of Chy4G078270 vs. TAIR 10
Match: AT5G44040.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-27
Identity = 78/171 (45.61%), Postives = 104/171 (60.82%), Query Frame = 0


Query: 127 TARDRNACVHSVLKPVENISQWKAVKVKDKHRSNPPSCKENMALNGAARSSLTEPSFKKS 186
           + RDR+  V++VL P+EN+SQWKAVK K +  +     KEN+ +   +  S  +      
Sbjct: 242 SVRDRSGYVNAVLNPIENLSQWKAVKAKGRTTTQTQPRKENVIIASFSLESQVDDLSSTF 301

Query: 187 SFGYKSKSCQPKRSDQDIAVDASLSNWLSSSEFTPPSKISTGISVLPTPESQGSNSPK-- 246
           S   KS+    K+  Q+IAVDASLS WLS+S+ T     ++G S + T  S+     K  
Sbjct: 302 SLNRKSRDETEKQRTQEIAVDASLSTWLSTSQTT-----TSGCSSVETTMSEKKKYSKLV 361

Query: 247 -SEEDRPILGPLTMEELKQFSTTPSPRKSPNRSADDMPIIGTVGTYW-SHS 294
              ++RPILG LT EE+KQFS T SPRKSP+RS +  PIIGTVG YW SHS
Sbjct: 362 QCHDERPILGALTAEEIKQFSATNSPRKSPSRSPES-PIIGTVGGYWNSHS 406

The following BLAST results are available for this feature:

BLAST of Chy4G078270 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G078270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T4Q3	2.4e-160	85.20	Eisosome protein SEG2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36...	[more]
A0A0A0LBG0	1.3e-153	71.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608680 PE=4 SV=1	[more]
A0A1S3BHB7	5.9e-151	71.26	eisosome protein SEG2 OS=Cucumis melo OX=3656 GN=LOC103489846 PE=4 SV=1	[more]
A0A6J1EYL2	3.6e-116	62.38	uncharacterized protein LOC111437397 OS=Cucurbita moschata OX=3662 GN=LOC1114373...	[more]
A0A6J1K1W2	3.0e-110	60.67	eisosome protein SEG2-like OS=Cucurbita maxima OX=3661 GN=LOC111491653 PE=4 SV=1	[more]

BLAST of Chy4G078270 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0037973.1	1.26e-205	85.20	eisosome protein SEG2 [Cucumis melo var. makuwa]	[more]
XP_004152060.1	1.04e-195	71.90	eisosome protein SEG2 [Cucumis sativus] >KGN58289.1 hypothetical protein Csa_017...	[more]
XP_008447385.1	3.41e-192	71.26	PREDICTED: eisosome protein SEG2 [Cucumis melo]	[more]
XP_038887467.1	7.97e-175	66.05	uncharacterized protein LOC120077603 isoform X1 [Benincasa hispida]	[more]
XP_038887468.1	9.39e-167	64.19	uncharacterized protein LOC120077603 isoform X2 [Benincasa hispida]	[more]

BLAST of Chy4G078270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04030.1	4.4e-29	43.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G44040.1	1.1e-27	45.61	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..195
None	No IPR available	PANTHER	PTHR33318:SF4	RRNA BIOGENESIS PROTEIN RRP36	coord: 116..320 coord: 1..72
IPR039300	Protein JASON	PANTHER	PTHR33318	ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT	coord: 1..72 coord: 116..320

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G078270.1	Chy4G078270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007142	male meiosis II