Chy4G077880 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G077880
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	ethylene-responsive transcription factor 1B-like
Location	chrH04: 16050519 .. 16051170 (+)
RNA-Seq Expression	Chy4G077880
Synteny	Chy4G077880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCTCTTACTTTTCGTTTTCCGATTCAGATTTCTCGACGGAGTCTTCATTCGGATCAACTGAATCATCGTTCTCATGGACTGATTTTTTCTCAATCCACAGTGCCCTAGAAAACTCAATCGGAATCGATGAATTTCTCGGGAGTCAAAAATCGGAATCGGAATCGAAAATCGTAGTGAAAGAAGAAATCGAAGTTAACTCGATCGATTTTAAGGAGGAGAAACAGAGGAAGACGACGGAGAAGAGTTACAGAGGTGTGAGACGGCGGCCTTGGGGTAAATACGCGGCGGAGATTAGGGATTCAACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGACAGCGCTGAAGCTGCTGCTTTAGCTTATGATCAAGCGGCATTTTCGATGAGAGGAACAATGGCGGTGTTGAATTTTCCGGTGGAAAGGGTGAGGGAATCATTACAGGATATTGAGTATGAATTGGAAGAAGGATGTTCGCCGGTGGTAGCCTTGAAGAGGAAACACTCAATGAGAAGGAAGTCGGTGGCGGCGGCGACAGCGGCGGTGGCGGTGGAGAAGAAGAAGATGAAGAAAAAGAACAATGTGGTGATTTTGGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGTTAAGTTCAT

mRNA sequence

ATGGAATCCTCTTACTTTTCGTTTTCCGATTCAGATTTCTCGACGGAGTCTTCATTCGGATCAACTGAATCATCGTTCTCATGGACTGATTTTTTCTCAATCCACAGTGCCCTAGAAAACTCAATCGGAATCGATGAATTTCTCGGGAGTCAAAAATCGGAATCGGAATCGAAAATCGTAGTGAAAGAAGAAATCGAAGTTAACTCGATCGATTTTAAGGAGGAGAAACAGAGGAAGACGACGGAGAAGAGTTACAGAGGTGTGAGACGGCGGCCTTGGGGTAAATACGCGGCGGAGATTAGGGATTCAACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGACAGCGCTGAAGCTGCTGCTTTAGCTTATGATCAAGCGGCATTTTCGATGAGAGGAACAATGGCGGTGTTGAATTTTCCGGTGGAAAGGGTGAGGGAATCATTACAGGATATTGAGTATGAATTGGAAGAAGGATGTTCGCCGGTGGTAGCCTTGAAGAGGAAACACTCAATGAGAAGGAAGTCGGTGGCGGCGGCGACAGCGGCGGTGGCGGTGGAGAAGAAGAAGATGAAGAAAAAGAACAATGTGGTGATTTTGGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGTTAAGTTCAT

Coding sequence (CDS)

ATGGAATCCTCTTACTTTTCGTTTTCCGATTCAGATTTCTCGACGGAGTCTTCATTCGGATCAACTGAATCATCGTTCTCATGGACTGATTTTTTCTCAATCCACAGTGCCCTAGAAAACTCAATCGGAATCGATGAATTTCTCGGGAGTCAAAAATCGGAATCGGAATCGAAAATCGTAGTGAAAGAAGAAATCGAAGTTAACTCGATCGATTTTAAGGAGGAGAAACAGAGGAAGACGACGGAGAAGAGTTACAGAGGTGTGAGACGGCGGCCTTGGGGTAAATACGCGGCGGAGATTAGGGATTCAACGAGACATGGAGTTAGGGTTTGGCTTGGAACTTTTGACAGCGCTGAAGCTGCTGCTTTAGCTTATGATCAAGCGGCATTTTCGATGAGAGGAACAATGGCGGTGTTGAATTTTCCGGTGGAAAGGGTGAGGGAATCATTACAGGATATTGAGTATGAATTGGAAGAAGGATGTTCGCCGGTGGTAGCCTTGAAGAGGAAACACTCAATGAGAAGGAAGTCGGTGGCGGCGGCGACAGCGGCGGTGGCGGTGGAGAAGAAGAAGATGAAGAAAAAGAACAATGTGGTGATTTTGGAAGATTTGGGAACAGAGTATTTGGAGGAACTTTTGATGTTAAGTTCAT

Protein sequence

MESSYFSFSDSDFSTESSFGSTESSFSWTDFFSIHSALENSIGIDEFLGSQKSESESKIVVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAAATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSSX

Homology

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BLAST of Chy4G077880 vs. ExPASy Swiss-Prot
Match: Q8LDC8 (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2)

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-43
Identity = 108/203 (53.20%), Postives = 137/203 (67.49%), Query Frame = 0


Query: 11  SDFSTESSFGSTESSFSWTDFFSIHSALENSIGIDEFLGSQKSESESKIVVKEEIEVNSI 70
           S FS E S GS+  SFS +   +       +   + FL     +S  +  +  + +   +
Sbjct: 11  SGFSPEYSIGSSPDSFSSSSSNNYSLPFNENDSEEMFLYGLIEQSTQQTYIDSDSQ--DL 70

Query: 71  DFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAF 130
             K    RK +EKSYRGVRRRPWGK+AAEIRDSTR+G+RVWLGTF+SAE AALAYDQAAF
Sbjct: 71  PIKSVSSRK-SEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAF 130

Query: 131 SMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAAATAAVAVEKK 190
           SMRG+ A+LNF  ERV+ESL +I+Y  E+GCSPVVALKRKHSMRR+     T     + +
Sbjct: 131 SMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKKTKDSDFDHR 190

Query: 191 KMKKKNNVVILEDLGTEYLEELL 214
            + K +NVV+ EDLG +YLEELL
Sbjct: 191 SV-KLDNVVVFEDLGEQYLEELL 209

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BLAST of Chy4G077880 vs. ExPASy Swiss-Prot
Match: A0A3Q7I5Y9 (Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.5e-41
Identity = 97/162 (59.88%), Postives = 124/162 (76.54%), Query Frame = 0


Query: 55  SESKIVVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGT 114
           S S   +KEE EV S     E++RK  +K+YRGVR+RPWGKYAAEIRDSTR+GVRVWLGT
Sbjct: 43  SSSSYGIKEE-EVTSY----EEERK--DKNYRGVRKRPWGKYAAEIRDSTRNGVRVWLGT 102

Query: 115 FDSAEAAALAYDQAAFSMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMR 174
           FD+AE AALAYDQAAF+MRG+MA+LNFPVE V+ESL +++   +  CSPV+ LK+++SMR
Sbjct: 103 FDNAEEAALAYDQAAFAMRGSMAILNFPVEIVKESLNEMKCRFDGNCSPVIELKKRYSMR 162

Query: 175 RKSVAAATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLS 217
           RKSV+          +K + + +VV+ EDLG EYLEELL+ S
Sbjct: 163 RKSVS----------RKNRARKDVVVFEDLGAEYLEELLISS 187

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BLAST of Chy4G077880 vs. ExPASy Swiss-Prot
Match: Q8VYM0 (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.4e-37
Identity = 103/240 (42.92%), Postives = 147/240 (61.25%), Query Frame = 0


Query: 11  SDFSTESSFGSTESSFSWTDFFSIHSALE-------NSIGIDEFLGSQKSESESKIVVKE 70
           S +S+ SS+ S++ S  W +   +  + E       N    D+F   +  E    +++KE
Sbjct: 7   SMYSSPSSWSSSQESLLWNESCFLDQSSEPQAFFCPNYDYSDDFFSFESPE----MMIKE 66

Query: 71  EIEVNSIDFKEEKQRK--TTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAA 130
           EI+   +   EE+++     E+SYRGVR+RPWGK+AAEIRDSTR+G+RVWLGTFD AE A
Sbjct: 67  EIQNGDVSNSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEA 126

Query: 131 ALAYDQAAFSMRGTMAVLNFPVERVRESLQDIE-YELEEGCSPVVALKRKHSMRRK---- 190
           ALAYDQAAF+ +G++A LNFPVE VRESL+ +E   L +G SPV+ALKRKHS+R +    
Sbjct: 127 ALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHSLRNRPRGK 186

Query: 191 ----------------SVAAATAAVAVEKKKM----KKKNNVVILEDLGTEYLEELLMLS 217
                           S +++T++ +    K     ++   +V+ EDLG EYLE+LLM S
Sbjct: 187 KRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGAEYLEQLLMSS 242

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BLAST of Chy4G077880 vs. ExPASy Swiss-Prot
Match: Q9LND1 (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 9.2e-36
Identity = 105/250 (42.00%), Postives = 156/250 (62.40%), Query Frame = 0


Query: 2   ESSYFSFSDSDFSTESSFGSTESSFSWTDFFSIHSALENSIGI--------DEFLGSQKS 61
           ++++ S   S  ++ SS  S++ SF W + F +H + + S  +        D+F   + S
Sbjct: 4   QTNFLSGEFSPENSSSSSWSSQESFLWEESF-LHQSFDQSFLLSSPTDNYCDDFFAFESS 63

Query: 62  ESESKIVVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLG 121
                 ++KEE +  ++  +EE      EKSYRGVR+RPWGK+AAEIRDSTR G+RVWLG
Sbjct: 64  ------IIKEEGKEATVAAEEE------EKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLG 123

Query: 122 TFDSAEAAALAYDQAAFSMRGTMAVLNFPVERVRESLQDIE-YELEEGCSPVVALKRKHS 181
           TFD+AEAAALAYDQAAF+++G++AVLNFP + V ESL+ +E   L +G SPV+ALKRKHS
Sbjct: 124 TFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHS 183

Query: 182 MRRK-----------------------SVAAATAAVAVEKKK----MKKKNN--VVILED 214
           MR +                       S ++++++++   +K    M +++N  +V+LED
Sbjct: 184 MRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLED 240

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BLAST of Chy4G077880 vs. ExPASy Swiss-Prot
Match: O04681 (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.3e-23
Identity = 52/68 (76.47%), Postives = 57/68 (83.82%), Query Frame = 0


Query: 83  KSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGTMAVLNFP 142
           K YRGVRRRPWGKYAAEIRDS RHG RVWLGTF++AE AALAYD+AAF MRG  A+LNFP
Sbjct: 57  KKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFP 116

Query: 143 VERVRESL 151
            E V  S+
Sbjct: 117 SEIVNASV 124

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BLAST of Chy4G077880 vs. ExPASy TrEMBL
Match: A0A0A0L7G2 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G389850 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.2e-104
Identity = 210/217 (96.77%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWTDFFSIHSALENSIGIDEFLGSQKSESESKIV 60
           MESSYFSFSDSDFST+SSFGSTESSFSWTDF SIHSALENSIGI+EFLG QK +SESKIV
Sbjct: 1   MESSYFSFSDSDFSTDSSFGSTESSFSWTDFLSIHSALENSIGIEEFLGKQKLDSESKIV 60

Query: 61  VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120
           VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA
Sbjct: 61  VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120

Query: 121 AALAYDQAAFSMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA 180
           AALAYDQAAFSMRGTMAVLNFPVE VRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA
Sbjct: 121 AALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA 180

Query: 181 ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 218
           ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS
Sbjct: 181 ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217

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BLAST of Chy4G077880 vs. ExPASy TrEMBL
Match: A0A5A7T5F2 (Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001090 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.0e-101
Identity = 204/217 (94.01%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWTDFFSIHSALENSIGIDEFLGSQKSESESKIV 60
           MESSYFSFSDSDFSTESSFGS ESSFSW++FFSIHSALENS G++EFLG+QKSESESKIV
Sbjct: 1   MESSYFSFSDSDFSTESSFGSVESSFSWSEFFSIHSALENSTGVEEFLGNQKSESESKIV 60

Query: 61  VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120
           VKEEIEVNSIDFKEEKQRKTTEK+YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA
Sbjct: 61  VKEEIEVNSIDFKEEKQRKTTEKNYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120

Query: 121 AALAYDQAAFSMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA 180
           AALAYDQAAFSMRGTMAVLNFPVE VRESLQDIEY+LEEGCSPVVALK+KHSMRRKSVAA
Sbjct: 121 AALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYQLEEGCSPVVALKKKHSMRRKSVAA 180

Query: 181 ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 218
           ATA  AVEKKKMKKKNNVVILEDLGTEYLEELLMLSS
Sbjct: 181 ATA--AVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 215

[Close]

BLAST of Chy4G077880 vs. ExPASy TrEMBL
Match: A0A1S3BHE9 (ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC103489880 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.0e-101
Identity = 204/217 (94.01%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWTDFFSIHSALENSIGIDEFLGSQKSESESKIV 60
           MESSYFSFSDSDFSTESSFGS ESSFSW++FFSIHSALENS G++EFLG+QKSESESKIV
Sbjct: 1   MESSYFSFSDSDFSTESSFGSVESSFSWSEFFSIHSALENSTGVEEFLGNQKSESESKIV 60

Query: 61  VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120
           VKEEIEVNSIDFKEEKQRKTTEK+YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA
Sbjct: 61  VKEEIEVNSIDFKEEKQRKTTEKNYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120

Query: 121 AALAYDQAAFSMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA 180
           AALAYDQAAFSMRGTMAVLNFPVE VRESLQDIEY+LEEGCSPVVALK+KHSMRRKSVAA
Sbjct: 121 AALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYQLEEGCSPVVALKKKHSMRRKSVAA 180

Query: 181 ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 218
           ATA  AVEKKKMKKKNNVVILEDLGTEYLEELLMLSS
Sbjct: 181 ATA--AVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 215

[Close]

BLAST of Chy4G077880 vs. ExPASy TrEMBL
Match: A0A6J1CY30 (ethylene-responsive transcription factor 1B-like OS=Momordica charantia OX=3673 GN=LOC111015318 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 7.2e-84
Identity = 180/219 (82.19%), Postives = 196/219 (89.50%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGST--ESSFSWTDFFSIHSALENSIGIDEFLGSQKSESESK 60
           ME+SYFSFSDSDFSTESSFGS+  ESSFSW++ FSIH +L      D+FLGSQ S +ESK
Sbjct: 1   METSYFSFSDSDFSTESSFGSSEMESSFSWSEIFSIHGSLAFP---DDFLGSQTSGTESK 60

Query: 61  IVVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA 120
           IVVKEEIEV+S DF+EEKQRKT EKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA
Sbjct: 61  IVVKEEIEVSSTDFEEEKQRKTPEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA 120

Query: 121 EAAALAYDQAAFSMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSV 180
           EAAALAYDQAAFSMRG+MAVLNFPVE VRESLQDI+Y+LEEGCSPVVALKRKHS+RRKS 
Sbjct: 121 EAAALAYDQAAFSMRGSMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSLRRKSA 180

Query: 181 AAATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 218
           AAA      +KKK+KK NNV+ILEDLGTEYLEELLMLSS
Sbjct: 181 AAAVE----KKKKIKKTNNVMILEDLGTEYLEELLMLSS 212

[Close]

BLAST of Chy4G077880 vs. ExPASy TrEMBL
Match: A0A6J1HV48 (ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111467117 PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 2.7e-83
Identity = 183/218 (83.94%), Postives = 193/218 (88.53%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWTDFFSIHSALENSIGIDEFLGSQKSESESKIV 60
           MESSYFSFSDSDFST SSFGS ESSFSW++FF I          DEFLG+Q +ESESKI 
Sbjct: 1   MESSYFSFSDSDFSTGSSFGSAESSFSWSEFFPIPLP-------DEFLGNQ-TESESKIA 60

Query: 61  VKEEIEVNSIDFKEEKQRKTT-EKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120
           VKEEIEV+SIDF EEKQRKTT EKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE
Sbjct: 61  VKEEIEVSSIDFAEEKQRKTTAEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAE 120

Query: 121 AAALAYDQAAFSMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVA 180
           AAALAYDQAAFSMRG +AVLNFPVE VRESLQDI+Y+LEEGCSPVVALKRKHS+RRKS  
Sbjct: 121 AAALAYDQAAFSMRGALAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSLRRKS-- 180

Query: 181 AATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 218
           AA AA AVEKKKMKKK N+VI EDLGTEYLEELLMLSS
Sbjct: 181 AAEAAAAVEKKKMKKKKNMVIFEDLGTEYLEELLMLSS 208

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BLAST of Chy4G077880 vs. NCBI nr
Match: KAE8650665.1 (hypothetical protein Csa_011527 [Cucumis sativus])

HSP 1 Score: 388 bits (996), Expect = 3.86e-135
Identity = 210/217 (96.77%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWTDFFSIHSALENSIGIDEFLGSQKSESESKIV 60
           MESSYFSFSDSDFST+SSFGSTESSFSWTDF SIHSALENSIGI+EFLG QK +SESKIV
Sbjct: 1   MESSYFSFSDSDFSTDSSFGSTESSFSWTDFLSIHSALENSIGIEEFLGKQKLDSESKIV 60

Query: 61  VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120
           VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA
Sbjct: 61  VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120

Query: 121 AALAYDQAAFSMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA 180
           AALAYDQAAFSMRGTMAVLNFPVE VRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA
Sbjct: 121 AALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA 180

Query: 181 ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217
           ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS
Sbjct: 181 ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217

[Close]

BLAST of Chy4G077880 vs. NCBI nr
Match: XP_004151982.1 (ethylene-response factor C3 [Cucumis sativus])

HSP 1 Score: 388 bits (996), Expect = 4.78e-135
Identity = 210/217 (96.77%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWTDFFSIHSALENSIGIDEFLGSQKSESESKIV 60
           MESSYFSFSDSDFST+SSFGSTESSFSWTDF SIHSALENSIGI+EFLG QK +SESKIV
Sbjct: 1   MESSYFSFSDSDFSTDSSFGSTESSFSWTDFLSIHSALENSIGIEEFLGKQKLDSESKIV 60

Query: 61  VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120
           VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA
Sbjct: 61  VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120

Query: 121 AALAYDQAAFSMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA 180
           AALAYDQAAFSMRGTMAVLNFPVE VRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA
Sbjct: 121 AALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA 180

Query: 181 ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217
           ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS
Sbjct: 181 ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217

[Close]

BLAST of Chy4G077880 vs. NCBI nr
Match: XP_008447432.1 (PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo] >KAA0038078.1 ethylene-responsive transcription factor 1B-like [Cucumis melo var. makuwa] >TYK20527.1 ethylene-responsive transcription factor 1B-like [Cucumis melo var. makuwa])

HSP 1 Score: 376 bits (966), Expect = 1.66e-130
Identity = 204/217 (94.01%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWTDFFSIHSALENSIGIDEFLGSQKSESESKIV 60
           MESSYFSFSDSDFSTESSFGS ESSFSW++FFSIHSALENS G++EFLG+QKSESESKIV
Sbjct: 1   MESSYFSFSDSDFSTESSFGSVESSFSWSEFFSIHSALENSTGVEEFLGNQKSESESKIV 60

Query: 61  VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120
           VKEEIEVNSIDFKEEKQRKTTEK+YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA
Sbjct: 61  VKEEIEVNSIDFKEEKQRKTTEKNYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120

Query: 121 AALAYDQAAFSMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA 180
           AALAYDQAAFSMRGTMAVLNFPVE VRESLQDIEY+LEEGCSPVVALK+KHSMRRKSVAA
Sbjct: 121 AALAYDQAAFSMRGTMAVLNFPVEMVRESLQDIEYQLEEGCSPVVALKKKHSMRRKSVAA 180

Query: 181 ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217
           ATAAV  EKKKMKKKNNVVILEDLGTEYLEELLMLSS
Sbjct: 181 ATAAV--EKKKMKKKNNVVILEDLGTEYLEELLMLSS 215

[Close]

BLAST of Chy4G077880 vs. NCBI nr
Match: XP_038888342.1 (ethylene-response factor C3-like [Benincasa hispida])

HSP 1 Score: 333 bits (853), Expect = 2.05e-113
Identity = 189/217 (87.10%), Postives = 200/217 (92.17%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTESSFSWTDFFSIHSALENSIGIDEFLGSQKSESESKIV 60
           MESSYFSF DSDFS E+SFGSTESSFSW +FFSI  +L+     +EF+G+Q SESESKIV
Sbjct: 1   MESSYFSFIDSDFSPETSFGSTESSFSWNEFFSI--SLQ-----EEFIGNQTSESESKIV 60

Query: 61  VKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120
           VKEEIEVNSIDF+EEK RKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA
Sbjct: 61  VKEEIEVNSIDFEEEKHRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEA 120

Query: 121 AALAYDQAAFSMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAA 180
           AALAYDQAAFSMRG MAVLNFPVE VRESLQDI+Y+LEEGCSPVVALKRKHSMRRKS +A
Sbjct: 121 AALAYDQAAFSMRGAMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSMRRKS-SA 180

Query: 181 ATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217
           ATAAV  EKKKMKKKNNVVILEDLGTEYLEELLMLSS
Sbjct: 181 ATAAV--EKKKMKKKNNVVILEDLGTEYLEELLMLSS 207

[Close]

BLAST of Chy4G077880 vs. NCBI nr
Match: XP_022146006.1 (ethylene-responsive transcription factor 1B-like [Momordica charantia])

HSP 1 Score: 319 bits (818), Expect = 5.04e-108
Identity = 180/219 (82.19%), Postives = 196/219 (89.50%), Query Frame = 0


Query: 1   MESSYFSFSDSDFSTESSFGSTE--SSFSWTDFFSIHSALENSIGIDEFLGSQKSESESK 60
           ME+SYFSFSDSDFSTESSFGS+E  SSFSW++ FSIH +L      D+FLGSQ S +ESK
Sbjct: 1   METSYFSFSDSDFSTESSFGSSEMESSFSWSEIFSIHGSLAFP---DDFLGSQTSGTESK 60

Query: 61  IVVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA 120
           IVVKEEIEV+S DF+EEKQRKT EKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA
Sbjct: 61  IVVKEEIEVSSTDFEEEKQRKTPEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSA 120

Query: 121 EAAALAYDQAAFSMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSV 180
           EAAALAYDQAAFSMRG+MAVLNFPVE VRESLQDI+Y+LEEGCSPVVALKRKHS+RRKS 
Sbjct: 121 EAAALAYDQAAFSMRGSMAVLNFPVEMVRESLQDIKYQLEEGCSPVVALKRKHSLRRKSA 180

Query: 181 AAATAAVAVEKKKMKKKNNVVILEDLGTEYLEELLMLSS 217
           AAA      +KKK+KK NNV+ILEDLGTEYLEELLMLSS
Sbjct: 181 AAAVE----KKKKIKKTNNVMILEDLGTEYLEELLMLSS 212

[Close]

BLAST of Chy4G077880 vs. TAIR 10
Match: AT3G23240.1 (ethylene response factor 1 )

HSP 1 Score: 177.6 bits (449), Expect = 1.1e-44
Identity = 108/203 (53.20%), Postives = 137/203 (67.49%), Query Frame = 0


Query: 11  SDFSTESSFGSTESSFSWTDFFSIHSALENSIGIDEFLGSQKSESESKIVVKEEIEVNSI 70
           S FS E S GS+  SFS +   +       +   + FL     +S  +  +  + +   +
Sbjct: 11  SGFSPEYSIGSSPDSFSSSSSNNYSLPFNENDSEEMFLYGLIEQSTQQTYIDSDSQ--DL 70

Query: 71  DFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAF 130
             K    RK +EKSYRGVRRRPWGK+AAEIRDSTR+G+RVWLGTF+SAE AALAYDQAAF
Sbjct: 71  PIKSVSSRK-SEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAF 130

Query: 131 SMRGTMAVLNFPVERVRESLQDIEYELEEGCSPVVALKRKHSMRRKSVAAATAAVAVEKK 190
           SMRG+ A+LNF  ERV+ESL +I+Y  E+GCSPVVALKRKHSMRR+     T     + +
Sbjct: 131 SMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKKTKDSDFDHR 190

Query: 191 KMKKKNNVVILEDLGTEYLEELL 214
            + K +NVV+ EDLG +YLEELL
Sbjct: 191 SV-KLDNVVVFEDLGEQYLEELL 209

[Close]

BLAST of Chy4G077880 vs. TAIR 10
Match: AT2G31230.1 (ethylene-responsive element binding factor 15 )

HSP 1 Score: 155.6 bits (392), Expect = 4.5e-38
Identity = 103/240 (42.92%), Postives = 147/240 (61.25%), Query Frame = 0


Query: 11  SDFSTESSFGSTESSFSWTDFFSIHSALE-------NSIGIDEFLGSQKSESESKIVVKE 70
           S +S+ SS+ S++ S  W +   +  + E       N    D+F   +  E    +++KE
Sbjct: 7   SMYSSPSSWSSSQESLLWNESCFLDQSSEPQAFFCPNYDYSDDFFSFESPE----MMIKE 66

Query: 71  EIEVNSIDFKEEKQRK--TTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAA 130
           EI+   +   EE+++     E+SYRGVR+RPWGK+AAEIRDSTR+G+RVWLGTFD AE A
Sbjct: 67  EIQNGDVSNSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEA 126

Query: 131 ALAYDQAAFSMRGTMAVLNFPVERVRESLQDIE-YELEEGCSPVVALKRKHSMRRK---- 190
           ALAYDQAAF+ +G++A LNFPVE VRESL+ +E   L +G SPV+ALKRKHS+R +    
Sbjct: 127 ALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHSLRNRPRGK 186

Query: 191 ----------------SVAAATAAVAVEKKKM----KKKNNVVILEDLGTEYLEELLMLS 217
                           S +++T++ +    K     ++   +V+ EDLG EYLE+LLM S
Sbjct: 187 KRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGAEYLEQLLMSS 242

[Close]

BLAST of Chy4G077880 vs. TAIR 10
Match: AT1G06160.1 (octadecanoid-responsive Arabidopsis AP2/ERF 59 )

HSP 1 Score: 151.8 bits (382), Expect = 6.6e-37
Identity = 105/250 (42.00%), Postives = 156/250 (62.40%), Query Frame = 0


Query: 2   ESSYFSFSDSDFSTESSFGSTESSFSWTDFFSIHSALENSIGI--------DEFLGSQKS 61
           ++++ S   S  ++ SS  S++ SF W + F +H + + S  +        D+F   + S
Sbjct: 4   QTNFLSGEFSPENSSSSSWSSQESFLWEESF-LHQSFDQSFLLSSPTDNYCDDFFAFESS 63

Query: 62  ESESKIVVKEEIEVNSIDFKEEKQRKTTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLG 121
                 ++KEE +  ++  +EE      EKSYRGVR+RPWGK+AAEIRDSTR G+RVWLG
Sbjct: 64  ------IIKEEGKEATVAAEEE------EKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLG 123

Query: 122 TFDSAEAAALAYDQAAFSMRGTMAVLNFPVERVRESLQDIE-YELEEGCSPVVALKRKHS 181
           TFD+AEAAALAYDQAAF+++G++AVLNFP + V ESL+ +E   L +G SPV+ALKRKHS
Sbjct: 124 TFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHS 183

Query: 182 MRRK-----------------------SVAAATAAVAVEKKK----MKKKNN--VVILED 214
           MR +                       S ++++++++   +K    M +++N  +V+LED
Sbjct: 184 MRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLED 240

[Close]

BLAST of Chy4G077880 vs. TAIR 10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 9.2e-23
Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 0


Query: 80  TTEKSYRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGTMAVL 139
           T E  YRGVR+RPWGKYAAEIRDS RHG RVWLGTF++AE AA AYD+AAF MRG  A+L
Sbjct: 9   TNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAIL 68

Query: 140 NFPVE 145
           NFP E
Sbjct: 69  NFPHE 73

[Close]

BLAST of Chy4G077880 vs. TAIR 10
Match: AT1G04370.1 (Ethylene-responsive element binding factor 14 )

HSP 1 Score: 102.8 bits (255), Expect = 3.5e-22
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0


Query: 85  YRGVRRRPWGKYAAEIRDSTRHGVRVWLGTFDSAEAAALAYDQAAFSMRGTMAVLNFPVE 144
           YRGVRRRPWGKYAAEIRDS +HG RVWLGTFD+AE AA AYD+AA+SMRG  A+LNFP E
Sbjct: 20  YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHE 79

The following BLAST results are available for this feature:

BLAST of Chy4G077880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDC8	1.6e-43	53.20	Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
A0A3Q7I5Y9	1.5e-41	59.88	Ethylene-response factor C3 OS=Solanum lycopersicum OX=4081 GN=ERF.C.3 PE=2 SV=1	[more]
Q8VYM0	6.4e-37	42.92	Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9LND1	9.2e-36	42.00	Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 ...	[more]
O04681	5.3e-23	76.47	Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicu...	[more]

BLAST of Chy4G077880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7G2	2.2e-104	96.77	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G389850 PE=...	[more]
A0A5A7T5F2	5.0e-101	94.01	Ethylene-responsive transcription factor 1B-like OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BHE9	5.0e-101	94.01	ethylene-responsive transcription factor 1B-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1CY30	7.2e-84	82.19	ethylene-responsive transcription factor 1B-like OS=Momordica charantia OX=3673 ...	[more]
A0A6J1HV48	2.7e-83	83.94	ethylene-responsive transcription factor 1B-like OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Chy4G077880 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650665.1	3.86e-135	96.77	hypothetical protein Csa_011527 [Cucumis sativus]	[more]
XP_004151982.1	4.78e-135	96.77	ethylene-response factor C3 [Cucumis sativus]	[more]
XP_008447432.1	1.66e-130	94.01	PREDICTED: ethylene-responsive transcription factor 1B-like [Cucumis melo] >KAA0...	[more]
XP_038888342.1	2.05e-113	87.10	ethylene-response factor C3-like [Benincasa hispida]	[more]
XP_022146006.1	5.04e-108	82.19	ethylene-responsive transcription factor 1B-like [Momordica charantia]	[more]

BLAST of Chy4G077880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23240.1	1.1e-44	53.20	ethylene response factor 1	[more]
AT2G31230.1	4.5e-38	42.92	ethylene-responsive element binding factor 15	[more]
AT1G06160.1	6.6e-37	42.00	octadecanoid-responsive Arabidopsis AP2/ERF 59	[more]
AT3G23220.1	9.2e-23	75.38	Integrase-type DNA-binding superfamily protein	[more]
AT1G04370.1	3.5e-22	80.00	Ethylene-responsive element binding factor 14	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 108..124 score: 65.88 coord: 85..96 score: 71.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 84..148 e-value: 5.7E-37 score: 138.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 84..134 e-value: 1.0E-14 score: 54.5
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 84..142 score: 23.077003
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 83..143 e-value: 3.36345E-20 score: 78.4675
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 83..144 e-value: 1.9E-26 score: 94.0
None	No IPR available	PANTHER	PTHR31190:SF132	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B	coord: 52..215
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 52..215
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 84..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G077880.1	Chy4G077880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity