Chy4G077820 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAAAGTTTCCTAATTGTGTTGGCCAAGTAATATCCAAATATGGCTCCACACATCTCCTTGTTAGTACACCTGAATACCTAATAAAACCCTTTTCTTTTTTCTTACATCTCTTTCTCTAAAAAGTACACAATTCATCATTATTTTTTCACACCTTAGAACTCCCCACATTGTTTTAATTTTCAGAGTTTTGAAGAAAAAAAGTTTGAAGGACTGCCTATGGATAATGGAGCTTATATGAACAACAATACCAACAATGGGAAGCAGCAGCAGCAGCAACAAAGGGGTTATGCAACAGAAGGAACTTTTTCAAGCAATGAATTTCAATGGCCAGCAAAAAATTATGGTTGTAATTTTTGCAAGAGGGAATTCAAATCAGCTCAAGCTCTTGGCGGGCATATGAATGTTCATAGAAGGGATAGGGCAAGAATGAGACTTTTGCCTTCTTGG ATGCTAAAGTTTCCTAATTGTGTTGGCCAAGTAATATCCAAATATGGCTCCACACATCTCCTTAGTTTTGAAGAAAAAAAGTTTGAAGGACTGCCTATGGATAATGGAGCTTATATGAACAACAATACCAACAATGGGAAGCAGCAGCAGCAGCAACAAAGGGGTTATGCAACAGAAGGAACTTTTTCAAGCAATGAATTTCAATGGCCAGCAAAAAATTATGGTTGTAATTTTTGCAAGAGGGAATTCAAATCAGCTCAAGCTCTTGGCGGGCATATGAATGTTCATAGAAGGGATAGGGCAAGAATGAGACTTTTGCCTTCTTGG ATGCTAAAGTTTCCTAATTGTGTTGGCCAAGTAATATCCAAATATGGCTCCACACATCTCCTTAGTTTTGAAGAAAAAAAGTTTGAAGGACTGCCTATGGATAATGGAGCTTATATGAACAACAATACCAACAATGGGAAGCAGCAGCAGCAGCAACAAAGGGGTTATGCAACAGAAGGAACTTTTTCAAGCAATGAATTTCAATGGCCAGCAAAAAATTATGGTTGTAATTTTTGCAAGAGGGAATTCAAATCAGCTCAAGCTCTTGGCGGGCATATGAATGTTCATAGAAGGGATAGGGCAAGAATGAGACTTTTGCCTTCTTGG MLKFPNCVGQVISKYGSTHLLSFEEKKFEGLPMDNGAYMNNNTNNGKQQQQQQRGYATEGTFSSNEFQWPAKNYGCNFCKREFKSAQALGGHMNVHRRDRARMRLLPSW Homology
BLAST of Chy4G077820 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 5.9e-15 Identity = 44/98 (44.90%), Postives = 56/98 (57.14%), Query Frame = 0
BLAST of Chy4G077820 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.2e-13 Identity = 32/42 (76.19%), Postives = 37/42 (88.10%), Query Frame = 0
BLAST of Chy4G077820 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 67.0 bits (162), Expect = 1.5e-10 Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of Chy4G077820 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-10 Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of Chy4G077820 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 7.7e-07 Identity = 22/34 (64.71%), Postives = 30/34 (88.24%), Query Frame = 0
BLAST of Chy4G077820 vs. ExPASy TrEMBL
Match: A0A0A0L7I0 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G392775 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of Chy4G077820 vs. ExPASy TrEMBL
Match: A0A5D3B8Q5 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold441G00170 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 4.5e-34 Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Chy4G077820 vs. ExPASy TrEMBL
Match: A0A1S3C0E4 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103495035 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 4.5e-34 Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Chy4G077820 vs. ExPASy TrEMBL
Match: A0A6J1HH25 (zinc finger protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111463985 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 4.8e-20 Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of Chy4G077820 vs. ExPASy TrEMBL
Match: A0A6J1K9X4 (transcriptional regulator SUPERMAN-like OS=Cucurbita maxima OX=3661 GN=LOC111491428 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.9e-16 Identity = 45/78 (57.69%), Postives = 57/78 (73.08%), Query Frame = 0
BLAST of Chy4G077820 vs. NCBI nr
Match: KAE8650670.1 (hypothetical protein Csa_011383, partial [Cucumis sativus]) HSP 1 Score: 223 bits (567), Expect = 2.86e-73 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of Chy4G077820 vs. NCBI nr
Match: XP_031737987.1 (zinc finger protein 11 isoform X1 [Cucumis sativus]) HSP 1 Score: 223 bits (567), Expect = 1.38e-71 Identity = 108/110 (98.18%), Postives = 108/110 (98.18%), Query Frame = 0
BLAST of Chy4G077820 vs. NCBI nr
Match: XP_031737988.1 (zinc finger protein 11 isoform X2 [Cucumis sativus]) HSP 1 Score: 204 bits (518), Expect = 7.29e-66 Identity = 99/101 (98.02%), Postives = 99/101 (98.02%), Query Frame = 0
BLAST of Chy4G077820 vs. NCBI nr
Match: XP_038888773.1 (LOW QUALITY PROTEIN: zinc finger protein 11-like [Benincasa hispida]) HSP 1 Score: 173 bits (438), Expect = 3.13e-52 Identity = 87/109 (79.82%), Postives = 90/109 (82.57%), Query Frame = 0
BLAST of Chy4G077820 vs. NCBI nr
Match: XP_008454679.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo] >KAA0053122.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa] >TYJ95497.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa]) HSP 1 Score: 152 bits (384), Expect = 3.20e-44 Identity = 74/79 (93.67%), Postives = 75/79 (94.94%), Query Frame = 0
BLAST of Chy4G077820 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 ) HSP 1 Score: 81.6 bits (200), Expect = 4.2e-16 Identity = 44/98 (44.90%), Postives = 56/98 (57.14%), Query Frame = 0
BLAST of Chy4G077820 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 75.5 bits (184), Expect = 3.0e-14 Identity = 32/42 (76.19%), Postives = 37/42 (88.10%), Query Frame = 0
BLAST of Chy4G077820 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 68.2 bits (165), Expect = 4.8e-12 Identity = 31/47 (65.96%), Postives = 36/47 (76.60%), Query Frame = 0
BLAST of Chy4G077820 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 67.0 bits (162), Expect = 1.1e-11 Identity = 30/55 (54.55%), Postives = 41/55 (74.55%), Query Frame = 0
BLAST of Chy4G077820 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 ) HSP 1 Score: 66.6 bits (161), Expect = 1.4e-11 Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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