Chy4G077770 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G077770
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Ring finger protein, putative
Location	chrH04: 15771177 .. 15772079 (-)
RNA-Seq Expression	Chy4G077770
Synteny	Chy4G077770

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAACAGCTTTCTTGCTTTTGAGTTACTACATTTTCATCACCAAATGCTGCTATAACTGCCATCAGTTTAGTTTGCTGAGAAGGTTTTCAAGTTTCCTTACCCCTCAACAACATGAAGATCCTTTCATAGCTCTCTCCCCAACGACAATGTGGAATCGCGGCCTTGAAGAGTCTATGATTCGCCAAATCCCGGCTTTTCGATTTGAAAGAGATGGTGAACATAGCGGTATCTATGGCTGTGTTGTTTGTTTAAGCGAGTTTCAAGAGAATGAAATGCTAAGGGTTTTGCCTAAATGCAGCCACACATTTCATTTGGACTGCATTGATATCTGGCTGCAAAGCAACTCTAATTGCCCTCTTTGTAGAACAAGCATTTCAGGTATAACAAAGCCTCCAATTGATCAAATTGTAGCTCCAAGCTCTTCTCCTCAAAACTCACAGCTTCTTTCCAACGGCTTAATGGGAAGTGATGAAGATTTTGTAGTTATTGAACTTGGTAGTGAAGATGAAGTAGTTTTCTCAGAAGGTCAACAAGAGGGTAATGCTTCAAGAGAAGTACTAGTTCAACAGACTTCGAAAAAGACCGAGAACAAGATCGGGAAACCAAAAACTCGAAAATGTCACCATGTTTCGATCATGGGAGACGAGGGTATCGATGTTAGAGAAAAAGATGATCAATTTTTCACTCAACCTATCAGAAGATCCTTTTCTATGGATTCTGCAGCTGATCAGCAGCTTTACTTAACTGTTGAAATGATAATCCATCAAGGTAGGCAAATCACCGAGTCTAGTAGTAGTAGTAGTGCAGAAAGTGACAGCAGAAACCGAAGATCTTTCTTCCCATTCCGATCAGGACGAGGATGCAAAAATGCAATTCTTCCACTTGAGTCTGATTTGTAA

mRNA sequence

ATGGGAACAGCTTTCTTGCTTTTGAGTTACTACATTTTCATCACCAAATGCTGCTATAACTGCCATCAGTTTAGTTTGCTGAGAAGGTTTTCAAGTTTCCTTACCCCTCAACAACATGAAGATCCTTTCATAGCTCTCTCCCCAACGACAATGTGGAATCGCGGCCTTGAAGAGTCTATGATTCGCCAAATCCCGGCTTTTCGATTTGAAAGAGATGGTGAACATAGCGGTATCTATGGCTGTGTTGTTTGTTTAAGCGAGTTTCAAGAGAATGAAATGCTAAGGGTTTTGCCTAAATGCAGCCACACATTTCATTTGGACTGCATTGATATCTGGCTGCAAAGCAACTCTAATTGCCCTCTTTGTAGAACAAGCATTTCAGGTATAACAAAGCCTCCAATTGATCAAATTGTAGCTCCAAGCTCTTCTCCTCAAAACTCACAGCTTCTTTCCAACGGCTTAATGGGAAGTGATGAAGATTTTGTAGTTATTGAACTTGGTAGTGAAGATGAAGTAGTTTTCTCAGAAGGTCAACAAGAGGGTAATGCTTCAAGAGAAGTACTAGTTCAACAGACTTCGAAAAAGACCGAGAACAAGATCGGGAAACCAAAAACTCGAAAATGTCACCATGTTTCGATCATGGGAGACGAGGGTATCGATGTTAGAGAAAAAGATGATCAATTTTTCACTCAACCTATCAGAAGATCCTTTTCTATGGATTCTGCAGCTGATCAGCAGCTTTACTTAACTGTTGAAATGATAATCCATCAAGGTAGGCAAATCACCGAGTCTAGTAGTAGTAGTAGTGCAGAAAGTGACAGCAGAAACCGAAGATCTTTCTTCCCATTCCGATCAGGACGAGGATGCAAAAATGCAATTCTTCCACTTGAGTCTGATTTGTAA

Coding sequence (CDS)

ATGGGAACAGCTTTCTTGCTTTTGAGTTACTACATTTTCATCACCAAATGCTGCTATAACTGCCATCAGTTTAGTTTGCTGAGAAGGTTTTCAAGTTTCCTTACCCCTCAACAACATGAAGATCCTTTCATAGCTCTCTCCCCAACGACAATGTGGAATCGCGGCCTTGAAGAGTCTATGATTCGCCAAATCCCGGCTTTTCGATTTGAAAGAGATGGTGAACATAGCGGTATCTATGGCTGTGTTGTTTGTTTAAGCGAGTTTCAAGAGAATGAAATGCTAAGGGTTTTGCCTAAATGCAGCCACACATTTCATTTGGACTGCATTGATATCTGGCTGCAAAGCAACTCTAATTGCCCTCTTTGTAGAACAAGCATTTCAGGTATAACAAAGCCTCCAATTGATCAAATTGTAGCTCCAAGCTCTTCTCCTCAAAACTCACAGCTTCTTTCCAACGGCTTAATGGGAAGTGATGAAGATTTTGTAGTTATTGAACTTGGTAGTGAAGATGAAGTAGTTTTCTCAGAAGGTCAACAAGAGGGTAATGCTTCAAGAGAAGTACTAGTTCAACAGACTTCGAAAAAGACCGAGAACAAGATCGGGAAACCAAAAACTCGAAAATGTCACCATGTTTCGATCATGGGAGACGAGGGTATCGATGTTAGAGAAAAAGATGATCAATTTTTCACTCAACCTATCAGAAGATCCTTTTCTATGGATTCTGCAGCTGATCAGCAGCTTTACTTAACTGTTGAAATGATAATCCATCAAGGTAGGCAAATCACCGAGTCTAGTAGTAGTAGTAGTGCAGAAAGTGACAGCAGAAACCGAAGATCTTTCTTCCCATTCCGATCAGGACGAGGATGCAAAAATGCAATTCTTCCACTTGAGTCTGATTTGTAA

Protein sequence

MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESMIRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCRTSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQEGNASREVLVQQTSKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMDSAADQQLYLTVEMIIHQGRQITESSSSSSAESDSRNRRSFFPFRSGRGCKNAILPLESDL*

Homology

[Close]

BLAST of Chy4G077770 vs. ExPASy Swiss-Prot
Match: Q9LSW9 (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 2.4e-58
Identity = 146/333 (43.84%), Postives = 204/333 (61.26%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESM 60
           + TAFLL+SYY+F+ KCC N H+  +L RFS     +  +DP +  SP  + +RGL+ES+
Sbjct: 45  LATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYSP-ELRSRGLDESV 104

Query: 61  IRQIPAFRF-ERDGEHSGIY-------------GCVVCLSEFQENEMLRVLPKCSHTFHL 120
           IR IP F+F +R  ++ G++              C VCLSEFQ+ E LR++P CSH FH+
Sbjct: 105 IRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHI 164

Query: 121 DCIDIWLQSNSNCPLCRTSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIEL 180
           DCID+WLQ+N+NCPLCRT +S  T  P D++ APS+SP+N  +L       + ++VVIEL
Sbjct: 165 DCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLR-----GENEYVVIEL 224

Query: 181 GS---EDEVVFSEGQ----QEGNASREVLVQQT------SKKTENKIGKP-KTRKCHHVS 240
           GS    D      G+    QE + S  +L + T      S K  ++ G P K RK H ++
Sbjct: 225 GSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKLDRGGLPRKFRKLHKMT 284

Query: 241 IMGDEGIDVRE-KDDQFFT-QPIRRSFSMDSAADQQLYLTVEMIIHQGRQIT------ES 297
            MGDE ID+R  KD+QF + QPIRRS SMDS+AD+QLYL V+  I + R++         
Sbjct: 285 SMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEAIRKNREVLVVGDGGGC 344

[Close]

BLAST of Chy4G077770 vs. ExPASy Swiss-Prot
Match: P93823 (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 5.0e-56
Identity = 148/333 (44.44%), Postives = 187/333 (56.16%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESM 60
           + TAFLL+SYYIF+ KCC N HQ  + RR          ++P +  SP  + NRGL+ES 
Sbjct: 52  LATAFLLVSYYIFVIKCCLNWHQIDIFRR----RRRSSDQNPLMIYSPHEV-NRGLDESA 111

Query: 61  IRQIPAFRFER-------DGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWL 120
           IR IP F+F++       + +      C VCL+EFQE+E LR++P C H FH+DCIDIWL
Sbjct: 112 IRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWL 171

Query: 121 QSNSNCPLCRTSISGITKPPIDQIVAPSSSPQNS-----QLLSNGL-MGSDEDFVVIELG 180
           Q N+NCPLCRTS+S      +D I APSS  +NS     + L  GL +G D+DFVVIELG
Sbjct: 172 QGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNRNLEPGLVLGGDDDFVVIELG 231

Query: 181 ----------------SEDEVVFSEGQQEGNASREVLVQQTSKKTENKIGKPKTRKCHHV 240
                           +E E V S     GN+ +   V     K  N+    K RK H V
Sbjct: 232 ASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKS--VSPLPIKFGNRGMYKKERKFHKV 291

Query: 241 SIMGDEGIDVREKDDQF-FTQPIRRSFSMDSAADQQLYLTV-EMIIHQGRQIT-----ES 297
           + MGDE ID R KD  F   QPIRRS SMDS+ D+QLYL V E I  + RQI      E 
Sbjct: 292 TSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQEEISRRNRQIPVAGDGED 351

[Close]

BLAST of Chy4G077770 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-23
Identity = 72/214 (33.64%), Postives = 109/214 (50.93%), Query Frame = 0


Query: 3   TAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWN-RGLEESMI 62
           +A +L+SYY  I+K C+  HQ S     S  L    + + F + +     N  GL ESMI
Sbjct: 67  SALILVSYYTLISKYCHRHHQTS----SSETLNLNHNGEGFFSSTQRISTNGDGLNESMI 126

Query: 63  RQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPL 122
           + I  ++++          C VCLSEF+ENE LR+LPKC+H FHL CID WL+S+SNCPL
Sbjct: 127 KSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPL 186

Query: 123 CRTSISGITKPPID-----QIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSE 182
           CR  ++G+  P         +V  + S    Q  S   +  +      + G  D VV  E
Sbjct: 187 CRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIE 246

Query: 183 ----GQQEGNASREVLVQQTSKKTENKIGKPKTR 207
               G +  +A  E+ + +  ++T+++   P  R
Sbjct: 247 DLEIGSRNSDARSELQLPEERRETKDEDSLPIRR 276

[Close]

BLAST of Chy4G077770 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 106.3 bits (264), Expect = 6.1e-22
Identity = 71/213 (33.33%), Postives = 110/213 (51.64%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFS------LLRRFSSFLTPQ--QHEDPFIALSPTTM- 60
           + +AF+L+SYY  I+K C+     S       + R SS  T Q   + +   A +P    
Sbjct: 67  LASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTI 126

Query: 61  ---WNRGLEESMIRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDC 120
                 GL+ES+I+ I  +++ +         C VCLSEFQENE LR+LPKC+H FH+ C
Sbjct: 127 GGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPC 186

Query: 121 IDIWLQSNSNCPLCRTSISGITKPPIDQIVAPSSSPQNSQLL--SNGLMGSDEDFVVIEL 180
           ID WL+S+SNCPLCR  I  +T   ++ +        N Q++  +N +   D+  VV+ L
Sbjct: 187 IDTWLKSHSNCPLCRAFI--VTSSAVEIV-----DLTNQQIVTENNSISTGDDSVVVVNL 246

Query: 181 GSEDEVVFSEGQQEGNASREVLVQQTSKKTENK 200
             E+    +E   EG+  +   +Q +    E +
Sbjct: 247 DLENSRSRNETVNEGSTPKPPEMQDSRDGEERR 272

[Close]

BLAST of Chy4G077770 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 2.9e-19
Identity = 73/214 (34.11%), Postives = 109/214 (50.93%), Query Frame = 0


Query: 3   TAFLLLSYYIFITKCCYN---CHQFSLLRRFSSFL---TPQQ--HEDPFIALSPTTMWNR 62
           TAFLL +YY  ++K C N       S   R    L   +P++   +DPF   S T     
Sbjct: 71  TAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFALESSTA---- 130

Query: 63  GLEESMIRQIPAFRFERDGEHSGIYG--CVVCLSEFQENEMLRVLPKCSHTFHLDCIDIW 122
           GL++++I++I  F+ ++      I G  C +CL EF E+E LR+LPKC+HTFH+ CID W
Sbjct: 131 GLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRW 190

Query: 123 LQSNSNCPLCRTSISGITKPPIDQIVAPSSSPQNSQLLSN-----GLMGSDEDFVVIELG 182
           L+S+SNCPLCR  I          IV  +  P++  ++ N       +GS E  VV++  
Sbjct: 191 LKSHSNCPLCRAKI----------IVPTTQQPEHHVVVMNLDRFTSNVGSAEGNVVVDDH 250

Query: 183 SEDEVVFSEGQQEGNASREVLVQQTSKKTENKIG 202
            E+  V          S   +V + S+  E + G
Sbjct: 251 REEVSVSISSHHPSWFSAADIVLRISRDGEEEEG 270

[Close]

BLAST of Chy4G077770 vs. ExPASy TrEMBL
Match: A0A0A0L809 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G393910 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 8.3e-163
Identity = 293/301 (97.34%), Postives = 293/301 (97.34%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESM 60
           MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQ EDPFIALSPTTMWN GLEESM
Sbjct: 51  MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQREDPFIALSPTTMWNCGLEESM 110

Query: 61  IRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP 120
           IRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP
Sbjct: 111 IRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP 170

Query: 121 LCRTSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQE 180
           LCRTSISGITKPPIDQ VAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQE
Sbjct: 171 LCRTSISGITKPPIDQTVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQE 230

Query: 181 GNASREVLVQQTSKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMD 240
           GNASREVLVQQTSKKTENKI KPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMD
Sbjct: 231 GNASREVLVQQTSKKTENKIRKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMD 290

Query: 241 SAADQQLYLTVEMIIHQGRQITESSSSSS-AESDSRNRRSFFPFRSGRGCKNAILPLESD 300
           SAADQQLYLTVEMIIHQGRQIT SSSSSS AESDSRNRRSF P RSGRGCKNAILPLESD
Sbjct: 291 SAADQQLYLTVEMIIHQGRQITRSSSSSSGAESDSRNRRSFLPSRSGRGCKNAILPLESD 350

[Close]

BLAST of Chy4G077770 vs. ExPASy TrEMBL
Match: A0A6J1ET78 (RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111437354 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 4.1e-138
Identity = 256/304 (84.21%), Postives = 269/304 (88.49%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESM 60
           MGT FLLL YYIFI+KCC N H FSLLRRFSSF + QQHEDPFIALSP TMWNRGLE+SM
Sbjct: 50  MGTVFLLLGYYIFISKCCSNWHHFSLLRRFSSFHS-QQHEDPFIALSP-TMWNRGLEQSM 109

Query: 61  IRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP 120
           I QIP FRFE+D E SG+YGCVVCLSEFQENE LRVLPKCSHTFHLDCID+WLQSNSNCP
Sbjct: 110 IGQIPTFRFEKDDEGSGLYGCVVCLSEFQENETLRVLPKCSHTFHLDCIDVWLQSNSNCP 169

Query: 121 LCRTSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQE 180
           LCRTSISG TKPPID IVAPSSSPQNSQLLSN LMGSDEDFVVIELGSEDEVV S GQQE
Sbjct: 170 LCRTSISGTTKPPIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSEDEVVSSTGQQE 229

Query: 181 GNASREVLVQQ----TSKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRS 240
              SRE LVQQ    + KK ENK+GK KTRKCHHVSIMGDEGI+VR KD+QFF QPIRRS
Sbjct: 230 STISREALVQQPRYHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRS 289

Query: 241 FSMDSAADQQLYLTVEMIIHQGRQITESSSSSSAESDSRNRRSFFPFRSGRGCKNAILPL 300
           FSMDSAADQQLYLTV+MIIHQ RQI ESSSSSSAE+DSRNRRSFFPFRSGRG KN ILPL
Sbjct: 290 FSMDSAADQQLYLTVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPL 349

[Close]

BLAST of Chy4G077770 vs. ExPASy TrEMBL
Match: A0A6J1K6J7 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111491128 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.6e-137
Identity = 256/304 (84.21%), Postives = 267/304 (87.83%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESM 60
           MGT  LLL YYIFITKCC N H FSLLRRFSSF + QQHEDPFIALSP TMWNRGLE+SM
Sbjct: 50  MGTVLLLLGYYIFITKCCSNWHHFSLLRRFSSFHS-QQHEDPFIALSP-TMWNRGLEQSM 109

Query: 61  IRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP 120
           I QIP FRFE D E SG+YGCVVCLSEFQENEMLRVLPKCSHTFHLDCID+WLQSNSNCP
Sbjct: 110 IGQIPTFRFEGDDEGSGLYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDVWLQSNSNCP 169

Query: 121 LCRTSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQE 180
           LCRTSISG TKPPID IVAPSSSPQNSQLLSN LMGSDEDFVVIELG EDEVV S GQQE
Sbjct: 170 LCRTSISGTTKPPIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGREDEVVSSTGQQE 229

Query: 181 GNASREVLVQQ----TSKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRS 240
              SRE LVQQ    + KK ENK+GK KTRKCHHVSIMGDEGI+VR KD+QFF QPIRRS
Sbjct: 230 STISREALVQQPRYHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRS 289

Query: 241 FSMDSAADQQLYLTVEMIIHQGRQITESSSSSSAESDSRNRRSFFPFRSGRGCKNAILPL 300
           FSMDSAADQQLYLTV+MIIHQ RQI ESSSSSSAE+DSRNRRSFFPFRSGRG KN ILPL
Sbjct: 290 FSMDSAADQQLYLTVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPL 349

[Close]

BLAST of Chy4G077770 vs. ExPASy TrEMBL
Match: A0A6J1CXJ5 (RING-H2 finger protein ATL16-like OS=Momordica charantia OX=3673 GN=LOC111015355 PE=4 SV=1)

HSP 1 Score: 497.7 bits (1280), Expect = 3.5e-137
Identity = 259/302 (85.76%), Postives = 270/302 (89.40%), Query Frame = 0


Query: 4   AFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESMIRQ 63
           +FLLL YYIFI KCC N HQFSLLRRFSSF T QQHEDPFIALSP TMWNRGLEESMIR+
Sbjct: 225 SFLLLGYYIFINKCCSNWHQFSLLRRFSSFHT-QQHEDPFIALSP-TMWNRGLEESMIRE 284

Query: 64  IPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCR 123
           IPAF+FERDG   GIYGCVVCLSEFQ++EMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCR
Sbjct: 285 IPAFQFERDGGGRGIYGCVVCLSEFQDDEMLRVLPKCSHTFHLDCIDIWLQSNSNCPLCR 344

Query: 124 TSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQEGNA 183
           TSISG TKPPID IVAPSSSPQNSQLLSN LMGSDEDFVVIELG EDEVV S GQQE   
Sbjct: 345 TSISGTTKPPIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGGEDEVVSSAGQQERTV 404

Query: 184 SREVLVQQ-----TSKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFS 243
           SREVLVQQ     + KK ENK+GK KTRKCHHVSIMGDEGI+VREKDDQFF QPIRRSFS
Sbjct: 405 SREVLVQQQPRNHSPKKFENKVGKSKTRKCHHVSIMGDEGINVREKDDQFFIQPIRRSFS 464

Query: 244 MDSAADQQLYLTVEMIIHQGRQITESSSSSSAESDSRNRRSFFPFRSGRGCKNAILPLES 301
           MDSAADQQLYLTV+MIIHQG QITE SSS++AESDSRNRRSF PFRSGRG KNAILPLES
Sbjct: 465 MDSAADQQLYLTVQMIIHQGSQITE-SSSTTAESDSRNRRSFLPFRSGRGFKNAILPLES 523

[Close]

BLAST of Chy4G077770 vs. ExPASy TrEMBL
Match: A0A5A7T7A7 (RING-H2 finger protein ATL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00990 PE=4 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 4.0e-133
Identity = 242/251 (96.41%), Postives = 244/251 (97.21%), Query Frame = 0


Query: 51  MWNRGLEESMIRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCID 110
           MWNRGLEESMIRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLR LPKCSHTFHLDCID
Sbjct: 1   MWNRGLEESMIRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRALPKCSHTFHLDCID 60

Query: 111 IWLQSNSNCPLCRTSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSED 170
           IWLQSNSNCPLCRTSISGITKPPI QIVAPSSSPQNSQLLSN LMGSDEDFVVIELGSED
Sbjct: 61  IWLQSNSNCPLCRTSISGITKPPIHQIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSED 120

Query: 171 EVVFSEGQQEGNASREVLVQQTSKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFT 230
           EVVFSEGQQEGNASR V VQQT KKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFT
Sbjct: 121 EVVFSEGQQEGNASRNVPVQQTPKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFT 180

Query: 231 QPIRRSFSMDSAADQQLYLTVEMIIHQGRQITE-SSSSSSAESDSRNRRSFFPFRSGRGC 290
           QPIRRSFSMDSAADQQLYLTV+MIIHQGRQITE SSSSSSAESDSRNRRSFFPFRSGRGC
Sbjct: 181 QPIRRSFSMDSAADQQLYLTVQMIIHQGRQITESSSSSSSAESDSRNRRSFFPFRSGRGC 240

Query: 291 KNAILPLESDL 301
           KNAILPLESD+
Sbjct: 241 KNAILPLESDM 251

[Close]

BLAST of Chy4G077770 vs. NCBI nr
Match: XP_031737606.1 (RING-H2 finger protein ATL16 isoform X1 [Cucumis sativus] >KGN57928.1 hypothetical protein Csa_011620 [Cucumis sativus])

HSP 1 Score: 577 bits (1487), Expect = 2.08e-206
Identity = 293/301 (97.34%), Postives = 293/301 (97.34%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESM 60
           MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQ EDPFIALSPTTMWN GLEESM
Sbjct: 51  MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQREDPFIALSPTTMWNCGLEESM 110

Query: 61  IRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP 120
           IRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP
Sbjct: 111 IRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP 170

Query: 121 LCRTSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQE 180
           LCRTSISGITKPPIDQ VAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQE
Sbjct: 171 LCRTSISGITKPPIDQTVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQE 230

Query: 181 GNASREVLVQQTSKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMD 240
           GNASREVLVQQTSKKTENKI KPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMD
Sbjct: 231 GNASREVLVQQTSKKTENKIRKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRSFSMD 290

Query: 241 SAADQQLYLTVEMIIHQGRQITESSSSSS-AESDSRNRRSFFPFRSGRGCKNAILPLESD 300
           SAADQQLYLTVEMIIHQGRQIT SSSSSS AESDSRNRRSF P RSGRGCKNAILPLESD
Sbjct: 291 SAADQQLYLTVEMIIHQGRQITRSSSSSSGAESDSRNRRSFLPSRSGRGCKNAILPLESD 350

[Close]

BLAST of Chy4G077770 vs. NCBI nr
Match: XP_038889009.1 (RING-H2 finger protein ATL16-like [Benincasa hispida])

HSP 1 Score: 506 bits (1304), Expect = 1.49e-178
Identity = 261/293 (89.08%), Postives = 270/293 (92.15%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESM 60
           MGTAFLLL YYIFI+KCC N HQFSLLRRFSSF TPQQ EDPFIALSPTTMWNRGLEESM
Sbjct: 50  MGTAFLLLGYYIFISKCCSNWHQFSLLRRFSSFHTPQQDEDPFIALSPTTMWNRGLEESM 109

Query: 61  IRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP 120
           IRQIPAF+FERDGE SGIY CVVCLS+F+ENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP
Sbjct: 110 IRQIPAFQFERDGEGSGIYSCVVCLSKFRENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP 169

Query: 121 LCRTSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQE 180
           LCRTSISGITKPPIDQIVAPSSSPQNSQLLSN +MGSDEDFVVIELG EDE VFS GQ E
Sbjct: 170 LCRTSISGITKPPIDQIVAPSSSPQNSQLLSNSIMGSDEDFVVIELGREDEEVFSPGQHE 229

Query: 181 GNASREVLVQQ----TSKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRS 240
           GNASREVLVQQ    + KK ENK+GKPKTRKCHHVSIMGDEGI+VR  DDQFFTQPIRRS
Sbjct: 230 GNASREVLVQQPRYHSPKKLENKVGKPKTRKCHHVSIMGDEGINVRANDDQFFTQPIRRS 289

Query: 241 FSMDSAADQQLYLTVEMIIHQGRQITESSSS-SSAESDSRNRRSFFPFRSGRG 288
           FSMDSAADQQLYLTV+MIIHQ RQITESSSS SSAE DSRNRRSFFPFRSGRG
Sbjct: 290 FSMDSAADQQLYLTVQMIIHQDRQITESSSSGSSAEIDSRNRRSFFPFRSGRG 342

[Close]

BLAST of Chy4G077770 vs. NCBI nr
Match: XP_023533032.1 (RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 497 bits (1280), Expect = 6.97e-175
Identity = 257/304 (84.54%), Postives = 270/304 (88.82%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESM 60
           MGT FLLL YYIFI+KCC N H FSLLRRFSSF + QQHEDPFIALSPT MWNRGLE+SM
Sbjct: 50  MGTVFLLLGYYIFISKCCSNWHHFSLLRRFSSFHS-QQHEDPFIALSPT-MWNRGLEQSM 109

Query: 61  IRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP 120
           I QIP FRFE+D E SG+YGCVVCLSEFQENEMLRVLPKCSHTFHLDCID+WLQSNSNCP
Sbjct: 110 IGQIPTFRFEKDDEGSGLYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDVWLQSNSNCP 169

Query: 121 LCRTSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQE 180
           LCRTSISG TKPPID IVAPSSSPQNSQLLSN LMGSDEDFVVIELGSEDEVV S GQQE
Sbjct: 170 LCRTSISGTTKPPIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSEDEVVSSTGQQE 229

Query: 181 GNASREVLVQQ----TSKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRS 240
              SRE LVQQ    + KK ENK+GK KTRKCHHVSIMGDEGI+VR KD+QFF QPIRRS
Sbjct: 230 STISREALVQQPRYHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRS 289

Query: 241 FSMDSAADQQLYLTVEMIIHQGRQITESSSSSSAESDSRNRRSFFPFRSGRGCKNAILPL 300
           FSMDSAADQQLYLTV+MIIHQ RQI ESSSSSSAE+DSRNRRSFFPFRSGRG KN ILPL
Sbjct: 290 FSMDSAADQQLYLTVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPL 349

[Close]

BLAST of Chy4G077770 vs. NCBI nr
Match: XP_022931044.1 (RING-H2 finger protein ATL16-like [Cucurbita moschata])

HSP 1 Score: 495 bits (1274), Expect = 5.71e-174
Identity = 256/304 (84.21%), Postives = 269/304 (88.49%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESM 60
           MGT FLLL YYIFI+KCC N H FSLLRRFSSF + QQHEDPFIALSPT MWNRGLE+SM
Sbjct: 50  MGTVFLLLGYYIFISKCCSNWHHFSLLRRFSSFHS-QQHEDPFIALSPT-MWNRGLEQSM 109

Query: 61  IRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP 120
           I QIP FRFE+D E SG+YGCVVCLSEFQENE LRVLPKCSHTFHLDCID+WLQSNSNCP
Sbjct: 110 IGQIPTFRFEKDDEGSGLYGCVVCLSEFQENETLRVLPKCSHTFHLDCIDVWLQSNSNCP 169

Query: 121 LCRTSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQE 180
           LCRTSISG TKPPID IVAPSSSPQNSQLLSN LMGSDEDFVVIELGSEDEVV S GQQE
Sbjct: 170 LCRTSISGTTKPPIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGSEDEVVSSTGQQE 229

Query: 181 GNASREVLVQQ----TSKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRS 240
              SRE LVQQ    + KK ENK+GK KTRKCHHVSIMGDEGI+VR KD+QFF QPIRRS
Sbjct: 230 STISREALVQQPRYHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRS 289

Query: 241 FSMDSAADQQLYLTVEMIIHQGRQITESSSSSSAESDSRNRRSFFPFRSGRGCKNAILPL 300
           FSMDSAADQQLYLTV+MIIHQ RQI ESSSSSSAE+DSRNRRSFFPFRSGRG KN ILPL
Sbjct: 290 FSMDSAADQQLYLTVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPL 349

[Close]

BLAST of Chy4G077770 vs. NCBI nr
Match: XP_022995659.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 493 bits (1269), Expect = 3.29e-173
Identity = 256/304 (84.21%), Postives = 267/304 (87.83%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESM 60
           MGT  LLL YYIFITKCC N H FSLLRRFSSF + QQHEDPFIALSPT MWNRGLE+SM
Sbjct: 50  MGTVLLLLGYYIFITKCCSNWHHFSLLRRFSSFHS-QQHEDPFIALSPT-MWNRGLEQSM 109

Query: 61  IRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCP 120
           I QIP FRFE D E SG+YGCVVCLSEFQENEMLRVLPKCSHTFHLDCID+WLQSNSNCP
Sbjct: 110 IGQIPTFRFEGDDEGSGLYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDVWLQSNSNCP 169

Query: 121 LCRTSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSEGQQE 180
           LCRTSISG TKPPID IVAPSSSPQNSQLLSN LMGSDEDFVVIELG EDEVV S GQQE
Sbjct: 170 LCRTSISGTTKPPIDHIVAPSSSPQNSQLLSNSLMGSDEDFVVIELGREDEVVSSTGQQE 229

Query: 181 GNASREVLVQQ----TSKKTENKIGKPKTRKCHHVSIMGDEGIDVREKDDQFFTQPIRRS 240
              SRE LVQQ    + KK ENK+GK KTRKCHHVSIMGDEGI+VR KD+QFF QPIRRS
Sbjct: 230 STISREALVQQPRYHSPKKLENKVGKSKTRKCHHVSIMGDEGINVRAKDEQFFIQPIRRS 289

Query: 241 FSMDSAADQQLYLTVEMIIHQGRQITESSSSSSAESDSRNRRSFFPFRSGRGCKNAILPL 300
           FSMDSAADQQLYLTV+MIIHQ RQI ESSSSSSAE+DSRNRRSFFPFRSGRG KN ILPL
Sbjct: 290 FSMDSAADQQLYLTVQMIIHQDRQINESSSSSSAENDSRNRRSFFPFRSGRGFKNTILPL 349

[Close]

BLAST of Chy4G077770 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 227.3 bits (578), Expect = 1.7e-59
Identity = 146/333 (43.84%), Postives = 204/333 (61.26%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESM 60
           + TAFLL+SYY+F+ KCC N H+  +L RFS     +  +DP +  SP  + +RGL+ES+
Sbjct: 45  LATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRNDQDPLMVYSP-ELRSRGLDESV 104

Query: 61  IRQIPAFRF-ERDGEHSGIY-------------GCVVCLSEFQENEMLRVLPKCSHTFHL 120
           IR IP F+F +R  ++ G++              C VCLSEFQ+ E LR++P CSH FH+
Sbjct: 105 IRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNCSHLFHI 164

Query: 121 DCIDIWLQSNSNCPLCRTSISGITKPPIDQIVAPSSSPQNSQLLSNGLMGSDEDFVVIEL 180
           DCID+WLQ+N+NCPLCRT +S  T  P D++ APS+SP+N  +L       + ++VVIEL
Sbjct: 165 DCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLR-----GENEYVVIEL 224

Query: 181 GS---EDEVVFSEGQ----QEGNASREVLVQQT------SKKTENKIGKP-KTRKCHHVS 240
           GS    D      G+    QE + S  +L + T      S K  ++ G P K RK H ++
Sbjct: 225 GSSIGSDRDSPRHGRLLTGQERSNSGYLLNENTQNSISPSPKKLDRGGLPRKFRKLHKMT 284

Query: 241 IMGDEGIDVRE-KDDQFFT-QPIRRSFSMDSAADQQLYLTVEMIIHQGRQIT------ES 297
            MGDE ID+R  KD+QF + QPIRRS SMDS+AD+QLYL V+  I + R++         
Sbjct: 285 SMGDECIDIRRGKDEQFGSIQPIRRSISMDSSADRQLYLAVQEAIRKNREVLVVGDGGGC 344

[Close]

BLAST of Chy4G077770 vs. TAIR 10
Match: AT1G04360.1 (RING/U-box superfamily protein )

HSP 1 Score: 219.5 bits (558), Expect = 3.5e-57
Identity = 148/333 (44.44%), Postives = 187/333 (56.16%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWNRGLEESM 60
           + TAFLL+SYYIF+ KCC N HQ  + RR          ++P +  SP  + NRGL+ES 
Sbjct: 52  LATAFLLVSYYIFVIKCCLNWHQIDIFRR----RRRSSDQNPLMIYSPHEV-NRGLDESA 111

Query: 61  IRQIPAFRFER-------DGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWL 120
           IR IP F+F++       + +      C VCL+EFQE+E LR++P C H FH+DCIDIWL
Sbjct: 112 IRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWL 171

Query: 121 QSNSNCPLCRTSISGITKPPIDQIVAPSSSPQNS-----QLLSNGL-MGSDEDFVVIELG 180
           Q N+NCPLCRTS+S      +D I APSS  +NS     + L  GL +G D+DFVVIELG
Sbjct: 172 QGNANCPLCRTSVSCEASFTLDLISAPSSPRENSPHSRNRNLEPGLVLGGDDDFVVIELG 231

Query: 181 ----------------SEDEVVFSEGQQEGNASREVLVQQTSKKTENKIGKPKTRKCHHV 240
                           +E E V S     GN+ +   V     K  N+    K RK H V
Sbjct: 232 ASNGNNRESVRNIDFLTEQERVTSNEVSTGNSPKS--VSPLPIKFGNRGMYKKERKFHKV 291

Query: 241 SIMGDEGIDVREKDDQF-FTQPIRRSFSMDSAADQQLYLTV-EMIIHQGRQIT-----ES 297
           + MGDE ID R KD  F   QPIRRS SMDS+ D+QLYL V E I  + RQI      E 
Sbjct: 292 TSMGDECIDTRGKDGHFGEIQPIRRSISMDSSVDRQLYLAVQEEISRRNRQIPVAGDGED 351

[Close]

BLAST of Chy4G077770 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-24
Identity = 72/214 (33.64%), Postives = 109/214 (50.93%), Query Frame = 0


Query: 3   TAFLLLSYYIFITKCCYNCHQFSLLRRFSSFLTPQQHEDPFIALSPTTMWN-RGLEESMI 62
           +A +L+SYY  I+K C+  HQ S     S  L    + + F + +     N  GL ESMI
Sbjct: 67  SALILVSYYTLISKYCHRHHQTS----SSETLNLNHNGEGFFSSTQRISTNGDGLNESMI 126

Query: 63  RQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDCIDIWLQSNSNCPL 122
           + I  ++++          C VCLSEF+ENE LR+LPKC+H FHL CID WL+S+SNCPL
Sbjct: 127 KSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPL 186

Query: 123 CRTSISGITKPPID-----QIVAPSSSPQNSQLLSNGLMGSDEDFVVIELGSEDEVVFSE 182
           CR  ++G+  P         +V  + S    Q  S   +  +      + G  D VV  E
Sbjct: 187 CRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIE 246

Query: 183 ----GQQEGNASREVLVQQTSKKTENKIGKPKTR 207
               G +  +A  E+ + +  ++T+++   P  R
Sbjct: 247 DLEIGSRNSDARSELQLPEERRETKDEDSLPIRR 276

[Close]

BLAST of Chy4G077770 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 106.3 bits (264), Expect = 4.4e-23
Identity = 71/213 (33.33%), Postives = 110/213 (51.64%), Query Frame = 0


Query: 1   MGTAFLLLSYYIFITKCCYNCHQFS------LLRRFSSFLTPQ--QHEDPFIALSPTTM- 60
           + +AF+L+SYY  I+K C+     S       + R SS  T Q   + +   A +P    
Sbjct: 67  LASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTI 126

Query: 61  ---WNRGLEESMIRQIPAFRFERDGEHSGIYGCVVCLSEFQENEMLRVLPKCSHTFHLDC 120
                 GL+ES+I+ I  +++ +         C VCLSEFQENE LR+LPKC+H FH+ C
Sbjct: 127 GGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPC 186

Query: 121 IDIWLQSNSNCPLCRTSISGITKPPIDQIVAPSSSPQNSQLL--SNGLMGSDEDFVVIEL 180
           ID WL+S+SNCPLCR  I  +T   ++ +        N Q++  +N +   D+  VV+ L
Sbjct: 187 IDTWLKSHSNCPLCRAFI--VTSSAVEIV-----DLTNQQIVTENNSISTGDDSVVVVNL 246

Query: 181 GSEDEVVFSEGQQEGNASREVLVQQTSKKTENK 200
             E+    +E   EG+  +   +Q +    E +
Sbjct: 247 DLENSRSRNETVNEGSTPKPPEMQDSRDGEERR 272

[Close]

BLAST of Chy4G077770 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 2.0e-20
Identity = 73/214 (34.11%), Postives = 109/214 (50.93%), Query Frame = 0


Query: 3   TAFLLLSYYIFITKCCYN---CHQFSLLRRFSSFL---TPQQ--HEDPFIALSPTTMWNR 62
           TAFLL +YY  ++K C N       S   R    L   +P++   +DPF   S T     
Sbjct: 71  TAFLLAAYYTLVSKYCANDTTNEAASESGRSDIILDVNSPERGDQDDPFALESSTA---- 130

Query: 63  GLEESMIRQIPAFRFERDGEHSGIYG--CVVCLSEFQENEMLRVLPKCSHTFHLDCIDIW 122
           GL++++I++I  F+ ++      I G  C +CL EF E+E LR+LPKC+HTFH+ CID W
Sbjct: 131 GLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRW 190

Query: 123 LQSNSNCPLCRTSISGITKPPIDQIVAPSSSPQNSQLLSN-----GLMGSDEDFVVIELG 182
           L+S+SNCPLCR  I          IV  +  P++  ++ N       +GS E  VV++  
Sbjct: 191 LKSHSNCPLCRAKI----------IVPTTQQPEHHVVVMNLDRFTSNVGSAEGNVVVDDH 250

Query: 183 SEDEVVFSEGQQEGNASREVLVQQTSKKTENKIG 202
            E+  V          S   +V + S+  E + G
Sbjct: 251 REEVSVSISSHHPSWFSAADIVLRISRDGEEEEG 270

The following BLAST results are available for this feature:

BLAST of Chy4G077770 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSW9	2.4e-58	43.84	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]
P93823	5.0e-56	44.44	RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1	[more]
Q9LF64	1.9e-23	33.64	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	6.1e-22	33.33	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
P0C041	2.9e-19	34.11	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]

BLAST of Chy4G077770 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L809	8.3e-163	97.34	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G393910 P...	[more]
A0A6J1ET78	4.1e-138	84.21	RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111437354 ...	[more]
A0A6J1K6J7	1.6e-137	84.21	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111491128 PE...	[more]
A0A6J1CXJ5	3.5e-137	85.76	RING-H2 finger protein ATL16-like OS=Momordica charantia OX=3673 GN=LOC111015355...	[more]
A0A5A7T7A7	4.0e-133	96.41	RING-H2 finger protein ATL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]

BLAST of Chy4G077770 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737606.1	2.08e-206	97.34	RING-H2 finger protein ATL16 isoform X1 [Cucumis sativus] >KGN57928.1 hypothetic...	[more]
XP_038889009.1	1.49e-178	89.08	RING-H2 finger protein ATL16-like [Benincasa hispida]	[more]
XP_023533032.1	6.97e-175	84.54	RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo]	[more]
XP_022931044.1	5.71e-174	84.21	RING-H2 finger protein ATL16-like [Cucurbita moschata]	[more]
XP_022995659.1	3.29e-173	84.21	RING-H2 finger protein ATL16-like [Cucurbita maxima]	[more]

BLAST of Chy4G077770 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43420.1	1.7e-59	43.84	RING/U-box superfamily protein	[more]
AT1G04360.1	3.5e-57	44.44	RING/U-box superfamily protein	[more]
AT5G17600.1	1.4e-24	33.64	RING/U-box superfamily protein	[more]
AT3G03550.1	4.4e-23	33.33	RING/U-box superfamily protein	[more]
AT4G17905.1	2.0e-20	34.11	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 81..122 e-value: 1.6E-7 score: 41.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 81..123 e-value: 6.6E-13 score: 48.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 81..123 score: 12.917115
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 55..130 e-value: 2.2E-22 score: 80.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..281
None	No IPR available	PANTHER	PTHR46913:SF8	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 1..297
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 81..123 e-value: 6.04897E-17 score: 71.1789
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 62..128
IPR044600	RING-H2 finger protein ATL1/ATL16	PANTHER	PTHR46913	RING-H2 FINGER PROTEIN ATL16	coord: 1..297

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G077770.1	Chy4G077770.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016740	transferase activity