Chy4G077110 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G077110
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein NDR1-like
Location	chrH04: 14646455 .. 14648278 (+)
RNA-Seq Expression	Chy4G077110
Synteny	Chy4G077110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAATCCGGCTGGTGCTGCAAGTGCTGCTTCAAGTTCATCATAACAGCCGGCTTTGCAGCTCTGTTTTTATGGTTAAGCCTTCGAACCCGCAAACCCAAATGCTCAATCGAATTTTTCTACATTCCAGCCTTAAATCAATCCCTAAATTCCTCCTCGAATTCCTCCCTCATCTTCGATCTGCGTCTCAAAAACCAGAACAAAGACAAATCCGTCTACTATGACACTATCTATCTCAACCTCACGCTTCTCGACGAAACTCGCCGCCTGGTCGGTAACTTGACGGTACCTGGTTTCCATCAAGGCCGCGACAAGAAGGCGTTGAGGACGGAGTCCTTCGAGGCCCGTGGAGTTGATTGGAAGGCGGTTTCCCGTAATGGGTCAACGGTTATCCGGCTGGATTTGGCCACGGCGGTCAGGTACAAGATCTTGCTGTGGAAGACCAAGAGGGAGAATTTGAGACTCGGGACAGAGGTCAAAGTCAACGGACAGGGAGTCAAGGACAACCCACATGGAATCACGCTCAACTCTGGCGCCACCGTGCCCGGCGGCTCGCTGGTGAGGGTTATTTGGAGCTTTTGGATGTTTGTTTTGTGGAAAAATTTGTGAAATTAAACCTCAACTGTGTTTCTTGATGTGGGTTTGTTTGATTTAGTGGAATTTTTTGGGCGGCGTTTTTAGTCGGAAGTGTTCTCCACCGCCCACTCATGGCAGACGTTAGATGGTAGATAAATTAAGTTTTGGTTAAATAAAATATTTATATGTTTGATTTTGGAAAGTTTTATTTTGGTCAAATTACAACGTATCTTGCATTTGTGGCTATTTGATTTCTATTTTGATTTTTAAGGCTTTTAAAGCATGAAATATGCATGTGAATTCTTAATGGATTTATTTTTAAATATAGAAAAATGGACCAAATATTTATTAAACAATATTTTAGATTTTTTTTTTATTTTGTGATAAATTTATATAATTTAAAATTGGCTAAATTTTGTAAATATTTTTATTTTTTTTATTTATAATAATTTCTATTTCTAAAAAAGTGAAATGATAAAGGAAACTAACTTAATCACATTTTAGAACTCTCACAACTGTAACAAAAATAACTGTGATTAAAACAATTGCTAAACCACCCAAGAAAGCTAAATATATTTTTACTCGAAAGGTTGATCAAATATAGAAAAGAAAAGAGAACTTCTTTCTAAATTCATAATTTCGGACAACGACTATCCACAATCTAATTGATTAAACTACATTGAAAGTCGTTAAATGTATTCTAATACAATAATATAAATGAAAACATAAAGTTCGAAAGATAAAACTCTATAAAAAAATTTATTCAAATTCAACTCATGTTATATAAAAAAGGTAGAAACAACCATCCTATTCATACTAATAAAAAATGTTATAGAAAAGAACAACATTTAATCATGGATTTTCTCCTACTCTAATAAATGAAAATTATACATAAAATTAAAGCAATACATATTAATTTAATTACTTTGATGAATTTCATTCTGTTTCCTGAATGGCCAATTTTTTTAGGGTTGCAACTCTTTCATATTTGAAAAGCTTAACTTAGAAGTAAATCGTTTAATGCTTCAGGTCCTAATCTGTCAAATATTTCCTTACCATTAAACATAGCCTGAGCTTCATTTGTGCTTTACATTTACATTGTTGAACTTCATAACCCCTCTTGTTGGTCAGCTACATATCAATACTCATATCAAACTTCCACCATTTGTTCGCACTCAGACCATTAAAAGCCAAGAAACTGAAATGGTGTTGTTGGATGTCAACGACGACACAAGGAGAGAATGA

mRNA sequence

ATGGCGGAATCCGGCTGGTGCTGCAAGTGCTGCTTCAAGTTCATCATAACAGCCGGCTTTGCAGCTCTGTTTTTATGGTTAAGCCTTCGAACCCGCAAACCCAAATGCTCAATCGAATTTTTCTACATTCCAGCCTTAAATCAATCCCTAAATTCCTCCTCGAATTCCTCCCTCATCTTCGATCTGCGTCTCAAAAACCAGAACAAAGACAAATCCGTCTACTATGACACTATCTATCTCAACCTCACGCTTCTCGACGAAACTCGCCGCCTGGTCGGTAACTTGACGGTACCTGGTTTCCATCAAGGCCGCGACAAGAAGGCGTTGAGGACGGAGTCCTTCGAGGCCCGTGGAGTTGATTGGAAGGCGGTTTCCCGTAATGGGTCAACGGTTATCCGGCTGGATTTGGCCACGGCGGTCAGGTACAAGATCTTGCTGTGGAAGACCAAGAGGGAGAATTTGAGACTCGGGACAGAGGTCAAAGTCAACGGACAGGGAGTCAAGGACAACCCACATGGAATCACGCTCAACTCTGGCGCCACCGTGCCCGGCGGCTCGCTGCTACATATCAATACTCATATCAAACTTCCACCATTTGTTCGCACTCAGACCATTAAAAGCCAAGAAACTGAAATGGTGTTGTTGGATGTCAACGACGACACAAGGAGAGAATGA

Coding sequence (CDS)

ATGGCGGAATCCGGCTGGTGCTGCAAGTGCTGCTTCAAGTTCATCATAACAGCCGGCTTTGCAGCTCTGTTTTTATGGTTAAGCCTTCGAACCCGCAAACCCAAATGCTCAATCGAATTTTTCTACATTCCAGCCTTAAATCAATCCCTAAATTCCTCCTCGAATTCCTCCCTCATCTTCGATCTGCGTCTCAAAAACCAGAACAAAGACAAATCCGTCTACTATGACACTATCTATCTCAACCTCACGCTTCTCGACGAAACTCGCCGCCTGGTCGGTAACTTGACGGTACCTGGTTTCCATCAAGGCCGCGACAAGAAGGCGTTGAGGACGGAGTCCTTCGAGGCCCGTGGAGTTGATTGGAAGGCGGTTTCCCGTAATGGGTCAACGGTTATCCGGCTGGATTTGGCCACGGCGGTCAGGTACAAGATCTTGCTGTGGAAGACCAAGAGGGAGAATTTGAGACTCGGGACAGAGGTCAAAGTCAACGGACAGGGAGTCAAGGACAACCCACATGGAATCACGCTCAACTCTGGCGCCACCGTGCCCGGCGGCTCGCTGCTACATATCAATACTCATATCAAACTTCCACCATTTGTTCGCACTCAGACCATTAAAAGCCAAGAAACTGAAATGGTGTTGTTGGATGTCAACGACGACACAAGGAGAGAATGA

Protein sequence

MAESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRTESFEARGVDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITLNSGATVPGGSLLHINTHIKLPPFVRTQTIKSQETEMVLLDVNDDTRRE*

Homology

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BLAST of Chy4G077110 vs. ExPASy Swiss-Prot
Match: O48915 (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.9e-40
Identity = 94/202 (46.53%), Postives = 123/202 (60.89%), Query Frame = 0


Query: 7   CCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKN 66
           CC CC  FI TAG  +LFLWLSLR  KPKCSI+ F+IPAL +  NS  N++L F +R  N
Sbjct: 14  CCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVYYDTIYLNLTLLDETR------RLVGNLTVPGFHQGRDKKALRTESFEA--RG 126
            NKDK +YYD ++LN + ++ T+       LVGN TVP F+QG  KKA +    +     
Sbjct: 74  PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQ 133

Query: 127 VDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITL-N 186
              +AV  NGS V RLDL T VR+KI+ WKTKR  + +G +V+VNG GVK    GI +  
Sbjct: 134 TVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKKGIKMKK 193

Query: 187 SGATVPGGSLLHINTHIKLPPF 200
           S ++ P  S   I+  + L  F
Sbjct: 194 SDSSFPLRSSFPISVLMNLLVF 215

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BLAST of Chy4G077110 vs. ExPASy TrEMBL
Match: A0A0A0L886 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418790 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 5.9e-97
Identity = 181/187 (96.79%), Postives = 183/187 (97.86%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           MAESGWCCKCCFKFIITAGF+ALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF
Sbjct: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRTESFEARGVD 120
           DLRLKNQNK+KSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALR ESFEARGVD
Sbjct: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITLNSGA 180
           WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVN QGVKDNPHGITLNSGA
Sbjct: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180

Query: 181 TVPGGSL 188
            VP GSL
Sbjct: 181 AVPVGSL 187

[Close]

BLAST of Chy4G077110 vs. ExPASy TrEMBL
Match: A0A5A7TYN2 (Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00260 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 2.0e-92
Identity = 171/191 (89.53%), Postives = 180/191 (94.24%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNS-SLI 60
           M ESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIE FYIPALNQSLNSSSNS +L 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRTESFEARGV 120
           FDLRLKNQNKDKSVYYDTIYLN TLLDE RR VGNLTVPGFHQGRDKKALR ES EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITLNSG 180
           DWKAVSRNGST++RLDLATAVRYKILLWKTKRENLRLGTE+KVNGQG+KDNPHGITLNSG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 ATVPGGSLLHI 191
           A +PGG+L+ +
Sbjct: 181 AAMPGGTLVRV 191

[Close]

BLAST of Chy4G077110 vs. ExPASy TrEMBL
Match: A0A1S3BZM3 (protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 2.0e-92
Identity = 171/191 (89.53%), Postives = 180/191 (94.24%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNS-SLI 60
           M ESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIE FYIPALNQSLNSSSNS +L 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRTESFEARGV 120
           FDLRLKNQNKDKSVYYDTIYLN TLLDE RR VGNLTVPGFHQGRDKKALR ES EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITLNSG 180
           DWKAVSRNGST++RLDLATAVRYKILLWKTKRENLRLGTE+KVNGQG+KDNPHGITLNSG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 ATVPGGSLLHI 191
           A +PGG+L+ +
Sbjct: 181 AAMPGGTLVRV 191

[Close]

BLAST of Chy4G077110 vs. ExPASy TrEMBL
Match: A0A6J1CEH8 (protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.2e-73
Identity = 143/186 (76.88%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M E+G C +CCF FI+T+GF ALFLWLSLRT KPKCSIE FYIPALNQSLNSSS+S++ F
Sbjct: 1   MTEAGGCGRCCFSFILTSGFTALFLWLSLRTHKPKCSIESFYIPALNQSLNSSSDSTVFF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRTESFEARGVD 120
           DLRLKNQNKDKSV+YD I LNLTL+D  RR VGNLTV GFHQGRDKKA R    EARGVD
Sbjct: 61  DLRLKNQNKDKSVFYDAINLNLTLVDGGRRPVGNLTVAGFHQGRDKKAFRKGQVEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITLNSGA 180
           WKAV RNGS V RLDLATAVRYKIL WKTKR+NLR+G EVKVN QG K+ PHGITL+SGA
Sbjct: 121 WKAVRRNGSAVFRLDLATAVRYKILFWKTKRDNLRVGAEVKVNAQGAKEYPHGITLSSGA 180

Query: 181 TVPGGS 187
            V G S
Sbjct: 181 AVAGRS 186

[Close]

BLAST of Chy4G077110 vs. ExPASy TrEMBL
Match: A0A6J1IH99 (protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.6e-70
Identity = 139/186 (74.73%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M ESG CC+CCF FI+T+GFAALFLWLSLRTRKPKCSIE FYIPALNQSLNS  NS++ F
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRTESFEARGVD 120
           DLRLKNQNKDKSV+YD++ LNLTL+    R +GN+TVPGFHQGR KKA R E+ EARGVD
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVG--GRPLGNVTVPGFHQGRGKKAFRNETIEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITLNSGA 180
           WKAVSRNGS + RLDLATAVR+KIL W TKRENLR+G E KVN QG  + P GITL+SGA
Sbjct: 121 WKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYP-GITLSSGA 180

Query: 181 TVPGGS 187
            VP GS
Sbjct: 181 AVPDGS 183

[Close]

BLAST of Chy4G077110 vs. NCBI nr
Match: XP_004152027.1 (protein NDR1 [Cucumis sativus] >KAE8650698.1 hypothetical protein Csa_011410 [Cucumis sativus])

HSP 1 Score: 367 bits (941), Expect = 7.22e-127
Identity = 181/190 (95.26%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           MAESGWCCKCCFKFIITAGF+ALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF
Sbjct: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRTESFEARGVD 120
           DLRLKNQNK+KSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALR ESFEARGVD
Sbjct: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITLNSGA 180
           WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVN QGVKDNPHGITLNSGA
Sbjct: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180

Query: 181 TVPGGSLLHI 190
            VP GSL+ +
Sbjct: 181 AVPVGSLVRV 190

[Close]

BLAST of Chy4G077110 vs. NCBI nr
Match: XP_008454544.1 (PREDICTED: protein NDR1-like [Cucumis melo] >KAA0046485.1 protein NDR1-like [Cucumis melo var. makuwa] >TYJ97726.1 protein NDR1-like [Cucumis melo var. makuwa])

HSP 1 Score: 350 bits (898), Expect = 2.66e-120
Identity = 171/191 (89.53%), Postives = 180/191 (94.24%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSS-LI 60
           M ESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIE FYIPALNQSLNSSSNS+ L 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRTESFEARGV 120
           FDLRLKNQNKDKSVYYDTIYLN TLLDE RR VGNLTVPGFHQGRDKKALR ES EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITLNSG 180
           DWKAVSRNGST++RLDLATAVRYKILLWKTKRENLRLGTE+KVNGQG+KDNPHGITLNSG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 ATVPGGSLLHI 190
           A +PGG+L+ +
Sbjct: 181 AAMPGGTLVRV 191

[Close]

BLAST of Chy4G077110 vs. NCBI nr
Match: XP_038897087.1 (protein NDR1-like [Benincasa hispida])

HSP 1 Score: 317 bits (813), Expect = 2.52e-107
Identity = 158/193 (81.87%), Postives = 166/193 (86.01%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M ESGWCC CCFKFIIT GFAALFLWLSLRT KPKCSIEFFYIPALNQSLNS SNS+L+F
Sbjct: 1   MTESGWCCHCCFKFIITTGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLNSPSNSTLLF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLL---DETRRLVGNLTVPGFHQGRDKKALRTESFEAR 120
           DLRLKNQNKDKSVYYD+I LNLTL+   D TRR VGNLTVPGFHQGRDKKA R E+ EAR
Sbjct: 61  DLRLKNQNKDKSVYYDSISLNLTLVGAPDGTRRPVGNLTVPGFHQGRDKKAFRKETVEAR 120

Query: 121 GVDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITLN 180
           GVDWKAVSRNG  V+RLD ATAVRYKIL WKTKRENLRLG EVKVN QG KD P  ITLN
Sbjct: 121 GVDWKAVSRNGPVVVRLDFATAVRYKILFWKTKRENLRLGAEVKVNRQGEKDYPRSITLN 180

Query: 181 SGATVPGGSLLHI 190
           SGA VP GSL+ +
Sbjct: 181 SGAAVPSGSLMRV 193

[Close]

BLAST of Chy4G077110 vs. NCBI nr
Match: XP_022139632.1 (protein NDR1-like [Momordica charantia])

HSP 1 Score: 288 bits (736), Expect = 1.19e-95
Identity = 143/186 (76.88%), Postives = 156/186 (83.87%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M E+G C +CCF FI+T+GF ALFLWLSLRT KPKCSIE FYIPALNQSLNSSS+S++ F
Sbjct: 1   MTEAGGCGRCCFSFILTSGFTALFLWLSLRTHKPKCSIESFYIPALNQSLNSSSDSTVFF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRTESFEARGVD 120
           DLRLKNQNKDKSV+YD I LNLTL+D  RR VGNLTV GFHQGRDKKA R    EARGVD
Sbjct: 61  DLRLKNQNKDKSVFYDAINLNLTLVDGGRRPVGNLTVAGFHQGRDKKAFRKGQVEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITLNSGA 180
           WKAV RNGS V RLDLATAVRYKIL WKTKR+NLR+G EVKVN QG K+ PHGITL+SGA
Sbjct: 121 WKAVRRNGSAVFRLDLATAVRYKILFWKTKRDNLRVGAEVKVNAQGAKEYPHGITLSSGA 180

Query: 181 TVPGGS 186
            V G S
Sbjct: 181 AVAGRS 186

[Close]

BLAST of Chy4G077110 vs. NCBI nr
Match: XP_023535135.1 (protein NDR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 278 bits (710), Expect = 9.70e-92
Identity = 139/190 (73.16%), Postives = 158/190 (83.16%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60
           M ESG CC+CCF FI+T+GFAALFLWLSLRTRKPKCSIE FYIPALNQSLNS  NS++ F
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRTESFEARGVD 120
           DLRLKNQNKDKSV+YD++ LNLTL+   RR +GN+TVPGFHQGR KKA R E+ E RGVD
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVG--RRPLGNVTVPGFHQGRGKKAFRNETIETRGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITLNSGA 180
           WKAVSRNGS + RLDLATAVR+KIL W TKRENLR+G E KVNGQG  + P GITL+SGA
Sbjct: 121 WKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYP-GITLSSGA 180

Query: 181 TVPGGSLLHI 190
            V  GS + +
Sbjct: 181 AVLDGSPVRV 187

[Close]

BLAST of Chy4G077110 vs. TAIR 10
Match: AT3G20600.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 166.0 bits (419), Expect = 3.5e-41
Identity = 94/202 (46.53%), Postives = 123/202 (60.89%), Query Frame = 0


Query: 7   CCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKN 66
           CC CC  FI TAG  +LFLWLSLR  KPKCSI+ F+IPAL +  NS  N++L F +R  N
Sbjct: 14  CCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVYYDTIYLNLTLLDETR------RLVGNLTVPGFHQGRDKKALRTESFEA--RG 126
            NKDK +YYD ++LN + ++ T+       LVGN TVP F+QG  KKA +    +     
Sbjct: 74  PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQ 133

Query: 127 VDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGVKDNPHGITL-N 186
              +AV  NGS V RLDL T VR+KI+ WKTKR  + +G +V+VNG GVK    GI +  
Sbjct: 134 TVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKKGIKMKK 193

Query: 187 SGATVPGGSLLHINTHIKLPPF 200
           S ++ P  S   I+  + L  F
Sbjct: 194 SDSSFPLRSSFPISVLMNLLVF 215

[Close]

BLAST of Chy4G077110 vs. TAIR 10
Match: AT3G20590.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 152.5 bits (384), Expect = 4.0e-37
Identity = 87/185 (47.03%), Postives = 113/185 (61.08%), Query Frame = 0


Query: 7   CCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKN 66
           CC C FKFI T    AL LWLSLR +KPKCSI+ FYIPAL+++L+S  N++L F +R  N
Sbjct: 14  CCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVYYDTIYLNLTLLDETRR------LVGNLTVPGFHQGRDKKALRTESFEARGVD 126
            NKDK +YYD ++L  + ++ T        LV N TVP F+QG  KKA +       G  
Sbjct: 74  PNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKAKKW------GQV 133

Query: 127 W--------KAVSRNGSTVIRLDLATAVRYKILLWKTK-RENLRLGTEVKVNGQGVKDNP 177
           W        +AV  NGS V RLDL T VR+KI+ WKTK    +++G +V+VNG GVK N 
Sbjct: 134 WPLNNQTVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDGVKANE 192

[Close]

BLAST of Chy4G077110 vs. TAIR 10
Match: AT3G20610.1 (non-race specific disease resistance protein, putative )

HSP 1 Score: 119.0 bits (297), Expect = 4.9e-27
Identity = 74/170 (43.53%), Postives = 104/170 (61.18%), Query Frame = 0


Query: 22  ALFLWLS-LRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLRLKNQNKDKSVYYDTIYL 81
           AL LWLS L    P+CSI +FYIPALN+SL SS N++L F +RLKN N  + +YY+ ++L
Sbjct: 28  ALCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINAKQGIYYEDLHL 87

Query: 82  NL-TLLDETRRLVGNLTVPGFHQGRDKKALR---TESFEARGVDWKAVSRNGSTVIRLDL 141
           +  T ++ +  LV N TVP F+QG +KKA +      F  + V  +AV  NGS + R+DL
Sbjct: 88  SFSTRINNSSLLVANYTVPRFYQGHEKKAKKWGQALPFNNQTV-IQAVLPNGSAIFRVDL 147

Query: 142 ATAVRYKILLWKTKRENLRLGTEVKVNGQG---VKDNPHGITLNSGATVP 184
              V+YK++ WKTKR  L+    ++VN  G   VKD   GI +    + P
Sbjct: 148 KMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKEDGIKMKISDSSP 196

[Close]

BLAST of Chy4G077110 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07
Identity = 42/171 (24.56%), Postives = 74/171 (43.27%), Query Frame = 0


Query: 4   SGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIFDLR 63
           S + C      +   G  A  LWLSLR  +P+  I+ F +  L+Q      N+ + F++ 
Sbjct: 43  SKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQP-TGVENARIAFNVT 102

Query: 64  LKNQNKDKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKK----ALRTESFEARGV 123
           + N N+   VY+D++  ++   D+   L+  L  P F Q  +       L   S      
Sbjct: 103 ILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLN-PFFQQPTNTTIVTGTLTGASLTVNSN 162

Query: 124 DWKAVSRN---GSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNGQGV 168
            W   S +   G+   RLD+ + +R+K+  W +K   +     + V   G+
Sbjct: 163 RWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDGL 211

The following BLAST results are available for this feature:

BLAST of Chy4G077110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48915	4.9e-40	46.53	Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1	[more]

BLAST of Chy4G077110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L886	5.9e-97	96.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418790 PE=4 SV=1	[more]
A0A5A7TYN2	2.0e-92	89.53	Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A1S3BZM3	2.0e-92	89.53	protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1	[more]
A0A6J1CEH8	1.2e-73	76.88	protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1	[more]
A0A6J1IH99	3.6e-70	74.73	protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1	[more]

BLAST of Chy4G077110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152027.1	7.22e-127	95.26	protein NDR1 [Cucumis sativus] >KAE8650698.1 hypothetical protein Csa_011410 [Cu...	[more]
XP_008454544.1	2.66e-120	89.53	PREDICTED: protein NDR1-like [Cucumis melo] >KAA0046485.1 protein NDR1-like [Cuc...	[more]
XP_038897087.1	2.52e-107	81.87	protein NDR1-like [Benincasa hispida]	[more]
XP_022139632.1	1.19e-95	76.88	protein NDR1-like [Momordica charantia]	[more]
XP_023535135.1	9.70e-92	73.16	protein NDR1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy4G077110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20600.1	3.5e-41	46.53	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20590.1	4.0e-37	47.03	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20610.1	4.9e-27	43.53	non-race specific disease resistance protein, putative	[more]
AT4G05220.1	1.1e-07	24.56	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31415:SF52	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY-RELATED	coord: 4..182
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 4..182

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G077110.1	Chy4G077110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane