Chy4G075580 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G075580
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	DUF4216 domain-containing protein
Location	chrH04: 10950691 .. 10951610 (-)
RNA-Seq Expression	Chy4G075580
Synteny	Chy4G075580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CATTATCATGTCCCTATCACATATACATCTTGGAAAAGTGTGCCTGCAGAACTGAAAGATAAGATATTTAGTACGGTTGAGGTATATATAATTTCAATGTGTTTATATTGACAATGTTCCTGATGTACGTACACTTTATTAATTACTTTTAAATATTTAGGCCACATTTGTCATTGATCTAAGATCTAGGAAAAACGTTCTCCAAACTGCAGGCATTTCATTTCGTCAGTTTAAGAGCGGGCTAACAACGAAATACATTATGCCACATAAGGATGAACTGCAACTCCTACAAGTTCTACCAGAAAAGTATTTATTTATTGATCAAAATCACTGGGAAGAATTTGTAAGGTCAAGATTATGTGAAACTTTTCAGGTATGAACAATGTTTATTGATCAAAATCATTAGGAACAATATTTGTTACTTCCTCACTAAAAAATACATTTGAAAATAGGAAACAAGACAATTGCAACAAGATCGATGATCTAAGAACAAGTACAACTATCAAATTTCGAGGAAAGGTTATGCTAATCTTATTGAGGAAATGGTAAGAATTAATTTATGCTCTCACAATTATTAAGTTTATCAAACTTTATTAAATGTTATACCAATCTTATTATGGAATTGGAATGTAGAAAAAGGAAGGTTCAAATGAAGCTAATTTTGATCGAGCCAACATGTGGAAGAAAGCTCGAGTTAACAAACAAGAGGAGTATGATAACGATGATGTTCAACAAGTTGTCCATAAAATAGTAAGACTTTTTGTAGATTACACATTTGAATTAACCATACATAAGCATTTCTATAACTTAGATTGGTTTTGTTACCGTTTTAGGATGAGATCTCAATGAATACATATTCATCGTTCTAGAAAGGACACTTTTCTAATGATGTCTTAACCCAAGCATTGGGTACAAAAGAG

mRNA sequence

CATTATCATGTCCCTATCACATATACATCTTGGAAAAGTGTGCCTGCAGAACTGAAAGATAAGATATTTAGTACGGTTGAGGCCACATTTGTCATTGATCTAAGATCTAGGAAAAACGTTCTCCAAACTGCAGGCATTTCATTTCGTCAGTTTAAGAGCGGGCTAACAACGAAATACATTATGCCACATAAGGATGAACTGCAACTCCTACAAGTTCTACCAGAAAAGTATTTATTTATTGATCAAAATCACTGGGAAGAATTTGTAAGGTCAAGATTATGTGAAACTTTTCAGAAAAAGGAAGGTTCAAATGAAGCTAATTTTGATCGAGCCAACATGTGGAAGAAAGCTCGAGTTAACAAACAAGAGGAGTATGATAACGATGATGTTCAACAAGTTGTCCATAAAATAGATGAGATCTCAATGAATACATATTCATCGTTCTAGAAAGGACACTTTTCTAATGATGTCTTAACCCAAGCATTGGGTACAAAAGAG

Coding sequence (CDS)

CATTATCATGTCCCTATCACATATACATCTTGGAAAAGTGTGCCTGCAGAACTGAAAGATAAGATATTTAGTACGGTTGAGGCCACATTTGTCATTGATCTAAGATCTAGGAAAAACGTTCTCCAAACTGCAGGCATTTCATTTCGTCAGTTTAAGAGCGGGCTAACAACGAAATACATTATGCCACATAAGGATGAACTGCAACTCCTACAAGTTCTACCAGAAAAGTATTTATTTATTGATCAAAATCACTGGGAAGAATTTGTAAGGTCAAGATTATGTGAAACTTTTCAGAAAAAGGAAGGTTCAAATGAAGCTAATTTTGATCGAGCCAACATGTGGAAGAAAGCTCGAGTTAACAAACAAGAGGAGTATGATAACGATGATGTTCAACAAGTTGTCCATAAAATAGATGAGATCTCAATGAATACATATTCATCGTTCTAGAAAGGACACTTTTCTAATGATGTCTTAACCCAAGCATTGGGTACAAAAGAG

Protein sequence

HYHVPITYTSWKSVPAELKDKIFSTVEATFVIDLRSRKNVLQTAGISFRQFKSGLTTKYIMPHKDELQLLQVLPEKYLFIDQNHWEEFVRSRLCETFQKKEGSNEANFDRANMWKKARVNKQEEYDNDDVQQVVHKIDEISMNTYSSF*KGHFSNDVLTQALGTKE

Homology

[Close]

BLAST of Chy4G075580 vs. ExPASy TrEMBL
Match: A0A5A7UXT2 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold409G00100 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.5e-68
Identity = 138/166 (83.13%), Postives = 145/166 (87.35%), Query Frame = 0


Query: 1   HYHVPITYTSWKSVPAELKDKIFSTVEATFVIDLRSRKNVLQTAGISFRQFKSGLTTKYI 60
           HYHVPITY SWKSVPAELKDKIF+TVEA FVID RSRKNVLQTAGISFRQFK+ LTTKYI
Sbjct: 73  HYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYI 132

Query: 61  MPHKDELQLLQVLPEKYLFIDQNHWEEFVRSRLCETFQKKEGSNEANFDRANMWKKARVN 120
           +PHKDE QLL V PEKY FI+QNHWEEFVRSRL ETFQ KEGSNE   DRA +WKKARVN
Sbjct: 133 IPHKDEPQLLHVPPEKYSFIEQNHWEEFVRSRLSETFQ-KEGSNEVYVDRAKLWKKARVN 192

Query: 121 KQEEYDNDDVQQVVHKIDEISMNTYSSF*KGHFSNDVLTQALGTKE 167
           KQ +YDNDD+QQVVHKIDEISMNT SS    H SNDVLTQALGTKE
Sbjct: 193 KQGQYDNDDIQQVVHKIDEISMNTDSSSVNRHCSNDVLTQALGTKE 237

[Close]

BLAST of Chy4G075580 vs. ExPASy TrEMBL
Match: A0A5A7UN41 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G001390 PE=3 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.8e-66
Identity = 140/195 (71.79%), Postives = 148/195 (75.90%), Query Frame = 0


Query: 1   HYHVPITYTSWKSVPAELKDKIFSTVEATFVIDLRSRKNVLQTAGISFRQFKSGLTTKYI 60
           HYHVPITYTSWKSVPAELKDKIF+TVEA FVIDLRSRKNVL+TAGISFRQFK+ LTTKYI
Sbjct: 79  HYHVPITYTSWKSVPAELKDKIFTTVEAAFVIDLRSRKNVLKTAGISFRQFKNWLTTKYI 138

Query: 61  MPHKDELQLLQVLPEKYLFIDQNHWEEFVRSRLCETFQKK-------------------- 120
           MPHKDE QLLQV PEKY FI+QNHWEEFVRSRL E FQ+K                    
Sbjct: 139 MPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSRLSEIFQEKRQLQQDRRSKNIYNHRISRK 198

Query: 121 ---------EGSNEANFDRANMWKKARVNKQEEYDNDDVQQVVHKIDEISMNTYSSF*KG 167
                    EGSNE   DRA MWKKARVNKQE+YDNDD+QQVVHKI+EISMNT  S    
Sbjct: 199 GYVNLKEEMEGSNEVYVDRAKMWKKARVNKQEQYDNDDIQQVVHKINEISMNTDLSSVNR 258

[Close]

BLAST of Chy4G075580 vs. ExPASy TrEMBL
Match: A0A5A7THN2 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00500 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.2e-65
Identity = 133/165 (80.61%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 1   HYHVPITYTSWKSVPAELKDKIFSTVEATFVIDLRSRKNVLQTAGISFRQFKSGLTTKYI 60
           HYHVPITYTSWKSVP ELKDKIF+TVEA FVID RSRKN+LQTA ISFRQFK+ +TTKYI
Sbjct: 631 HYHVPITYTSWKSVPPELKDKIFTTVEAAFVIDPRSRKNILQTASISFRQFKNWITTKYI 690

Query: 61  MPHKDELQLLQVLPEKYLFIDQNHWEEFVRSRLCETFQKKEGSNEANFDRANMWKKARVN 120
           MPHKD+LQLLQ  PEKY FI+QNHWEEFVRSRL ETFQ KEGSNE   DRA MWKKARVN
Sbjct: 691 MPHKDDLQLLQAPPEKYSFIEQNHWEEFVRSRLSETFQ-KEGSNEVYVDRAKMWKKARVN 750

Query: 121 KQEEYDNDDVQQVVHKIDEISMNTYSSF*KGHFSNDVLTQALGTK 166
           KQ +YDND +QQVVHKIDEISMNT SS    H SNDVLTQAL  K
Sbjct: 751 KQGQYDNDGIQQVVHKIDEISMNTDSSSVNRHCSNDVLTQALVKK 794

[Close]

BLAST of Chy4G075580 vs. ExPASy TrEMBL
Match: A0A5A7V0G8 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00370 PE=3 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 2.0e-65
Identity = 139/196 (70.92%), Postives = 146/196 (74.49%), Query Frame = 0


Query: 1   HYHVPITYTSWKSVPAELKDKIFSTVEATFVIDLRSRKNVLQTAGISFRQFKSGLTTKYI 60
           HYHVPITY SWKSVPAELKDKIF+TVEA FVID RSRKNVLQTAGISFRQFK+ LTTKYI
Sbjct: 73  HYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYI 132

Query: 61  MPHKDELQLLQVLPEKYLFIDQNHWEEFVRSRLCETFQKKE------------------- 120
           +PHKDE QLLQV PEKY FI+QNHWEEFVRSRL ETFQ+K                    
Sbjct: 133 IPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSRLSETFQEKRKLQQDRRSKNKYNHRISRK 192

Query: 121 -----------GSNEANFDRANMWKKARVNKQEEYDNDDVQQVVHKIDEISMNTYSSF*K 167
                      GSNE   DRA MWKKARVNKQ +YDNDD+QQVVHKIDEISMNT SS   
Sbjct: 193 GYANLKEEMKGGSNEVYVDRAKMWKKARVNKQGQYDNDDIQQVVHKIDEISMNTDSSSVN 252

[Close]

BLAST of Chy4G075580 vs. ExPASy TrEMBL
Match: A0A5D3BRU8 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G001000 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.4e-65
Identity = 133/165 (80.61%), Postives = 140/165 (84.85%), Query Frame = 0


Query: 1   HYHVPITYTSWKSVPAELKDKIFSTVEATFVIDLRSRKNVLQTAGISFRQFKSGLTTKYI 60
           HYHVPITYTSWKSVP ELKDKIF+TVEA FVID RSRKN+LQTA ISFRQFK+ LTTKYI
Sbjct: 660 HYHVPITYTSWKSVPPELKDKIFTTVEAAFVIDPRSRKNILQTANISFRQFKNWLTTKYI 719

Query: 61  MPHKDELQLLQVLPEKYLFIDQNHWEEFVRSRLCETFQKKEGSNEANFDRANMWKKARVN 120
           MPHKD+LQLLQ   EKY FI+QNHWEEFVRSRL ETFQ  EGSNE   DRA MWKKARVN
Sbjct: 720 MPHKDDLQLLQAPSEKYSFIEQNHWEEFVRSRLSETFQ--EGSNEVYVDRAKMWKKARVN 779

Query: 121 KQEEYDNDDVQQVVHKIDEISMNTYSSF*KGHFSNDVLTQALGTK 166
           KQ +YDNDD+QQVVHKIDEISMNT SS    H SNDVLTQAL  K
Sbjct: 780 KQGQYDNDDIQQVVHKIDEISMNTDSSSVNRHCSNDVLTQALVKK 822

[Close]

BLAST of Chy4G075580 vs. NCBI nr
Match: KAA0058329.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 266 bits (680), Expect = 1.42e-84
Identity = 138/166 (83.13%), Postives = 145/166 (87.35%), Query Frame = 0


Query: 1   HYHVPITYTSWKSVPAELKDKIFSTVEATFVIDLRSRKNVLQTAGISFRQFKSGLTTKYI 60
           HYHVPITY SWKSVPAELKDKIF+TVEA FVID RSRKNVLQTAGISFRQFK+ LTTKYI
Sbjct: 73  HYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYI 132

Query: 61  MPHKDELQLLQVLPEKYLFIDQNHWEEFVRSRLCETFQKKEGSNEANFDRANMWKKARVN 120
           +PHKDE QLL V PEKY FI+QNHWEEFVRSRL ETFQK EGSNE   DRA +WKKARVN
Sbjct: 133 IPHKDEPQLLHVPPEKYSFIEQNHWEEFVRSRLSETFQK-EGSNEVYVDRAKLWKKARVN 192

Query: 121 KQEEYDNDDVQQVVHKIDEISMNTYSSF*KGHFSNDVLTQALGTKE 166
           KQ +YDNDD+QQVVHKIDEISMNT SS    H SNDVLTQALGTKE
Sbjct: 193 KQGQYDNDDIQQVVHKIDEISMNTDSSSVNRHCSNDVLTQALGTKE 237

[Close]

BLAST of Chy4G075580 vs. NCBI nr
Match: KAA0054474.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] >TYK14564.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 248 bits (634), Expect = 3.33e-81
Identity = 128/159 (80.50%), Postives = 135/159 (84.91%), Query Frame = 0


Query: 1   HYHVPITYTSWKSVPAELKDKIFSTVEATFVIDLRSRKNVLQTAGISFRQFKSGLTTKYI 60
           HYH+PI YT WKSV AELKDKIF+TVE  FVID RSRKNVLQT GISFRQFK+ LTTKYI
Sbjct: 41  HYHIPIIYTYWKSVLAELKDKIFTTVEVAFVIDPRSRKNVLQTVGISFRQFKNWLTTKYI 100

Query: 61  MPHKDELQLLQVLPEKYLFIDQNHWEEFVRSRLCETFQKKEGSNEANFDRANMWKKARVN 120
           MPHKDE QLLQV PEKY FI+QNHWEEFVR RL ETFQK EGSNE   DRA MWKKARVN
Sbjct: 101 MPHKDEPQLLQVPPEKYTFIEQNHWEEFVRPRLFETFQK-EGSNEVYVDRAKMWKKARVN 160

Query: 121 KQEEYDNDDVQQVVHKIDEISMNTYSSF*KGHFSNDVLT 159
           KQ +YDNDD+QQV+HKIDEISMNT SS    HFSNDVLT
Sbjct: 161 KQGQYDNDDIQQVIHKIDEISMNTDSSSVNRHFSNDVLT 198

[Close]

BLAST of Chy4G075580 vs. NCBI nr
Match: KAA0054991.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 259 bits (663), Expect = 1.22e-80
Identity = 140/195 (71.79%), Postives = 148/195 (75.90%), Query Frame = 0


Query: 1   HYHVPITYTSWKSVPAELKDKIFSTVEATFVIDLRSRKNVLQTAGISFRQFKSGLTTKYI 60
           HYHVPITYTSWKSVPAELKDKIF+TVEA FVIDLRSRKNVL+TAGISFRQFK+ LTTKYI
Sbjct: 79  HYHVPITYTSWKSVPAELKDKIFTTVEAAFVIDLRSRKNVLKTAGISFRQFKNWLTTKYI 138

Query: 61  MPHKDELQLLQVLPEKYLFIDQNHWEEFVRSRLCETFQKK-------------------- 120
           MPHKDE QLLQV PEKY FI+QNHWEEFVRSRL E FQ+K                    
Sbjct: 139 MPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSRLSEIFQEKRQLQQDRRSKNIYNHRISRK 198

Query: 121 ---------EGSNEANFDRANMWKKARVNKQEEYDNDDVQQVVHKIDEISMNTYSSF*KG 166
                    EGSNE   DRA MWKKARVNKQE+YDNDD+QQVVHKI+EISMNT  S    
Sbjct: 199 GYVNLKEEMEGSNEVYVDRAKMWKKARVNKQEQYDNDDIQQVVHKINEISMNTDLSSVNR 258

[Close]

BLAST of Chy4G075580 vs. NCBI nr
Match: KAA0060814.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 256 bits (654), Expect = 6.08e-79
Identity = 139/196 (70.92%), Postives = 146/196 (74.49%), Query Frame = 0


Query: 1   HYHVPITYTSWKSVPAELKDKIFSTVEATFVIDLRSRKNVLQTAGISFRQFKSGLTTKYI 60
           HYHVPITY SWKSVPAELKDKIF+TVEA FVID RSRKNVLQTAGISFRQFK+ LTTKYI
Sbjct: 73  HYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYI 132

Query: 61  MPHKDELQLLQVLPEKYLFIDQNHWEEFVRSRLCETFQKKE------------------- 120
           +PHKDE QLLQV PEKY FI+QNHWEEFVRSRL ETFQ+K                    
Sbjct: 133 IPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSRLSETFQEKRKLQQDRRSKNKYNHRISRK 192

Query: 121 -----------GSNEANFDRANMWKKARVNKQEEYDNDDVQQVVHKIDEISMNTYSSF*K 166
                      GSNE   DRA MWKKARVNKQ +YDNDD+QQVVHKIDEISMNT SS   
Sbjct: 193 GYANLKEEMKGGSNEVYVDRAKMWKKARVNKQGQYDNDDIQQVVHKIDEISMNTDSSSVN 252

[Close]

BLAST of Chy4G075580 vs. NCBI nr
Match: KAA0032239.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (642), Expect = 6.25e-79
Identity = 139/197 (70.56%), Postives = 147/197 (74.62%), Query Frame = 0


Query: 1   HYHVPITYTSWKSVPAELKDKIFSTVEATFVIDLRSRKNVLQTAGISFRQFKSGLTTKYI 60
           HYHVPITY SWKSVPAELKDKIF+TVEA FVID RSRKNVLQTAGISFRQFK+ LTTKYI
Sbjct: 73  HYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFKNWLTTKYI 132

Query: 61  MPHKDELQLLQVLPEKYLFIDQNHWEEFVRSRLCETFQKK-------------------- 120
           +PHKDE QLLQV PEKY FI+QNHWEEFVRSRL ETFQ+K                    
Sbjct: 133 IPHKDEPQLLQVPPEKYSFIEQNHWEEFVRSRLSETFQEKRKLQQDRRSKNKYNHRISRK 192

Query: 121 ----------EGSNEANFDRANMWKKARVNKQEEYDNDDVQQVVHKI-DEISMNTYSSF* 166
                     EGSNE   DRA MWKKARVNKQ +YDNDD+QQVVHKI +EISMNT SS  
Sbjct: 193 GYANLKEEMKEGSNEVYVDRAKMWKKARVNKQGQYDNDDIQQVVHKIVNEISMNTDSSSM 252

The following BLAST results are available for this feature:

BLAST of Chy4G075580 vs.


Match Name	E-value	Identity	Description

BLAST of Chy4G075580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UXT2	2.5e-68	83.13	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7UN41	1.8e-66	71.79	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7THN2	1.2e-65	80.61	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7V0G8	2.0e-65	70.92	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3BRU8	4.4e-65	80.61	Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Chy4G075580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0058329.1	1.42e-84	83.13	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
KAA0054474.1	3.33e-81	80.50	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] >TYK145...	[more]
KAA0054991.1	1.22e-80	71.79	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
KAA0060814.1	6.08e-79	70.92	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]
KAA0032239.1	6.25e-79	70.56	putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]	[more]

BLAST of Chy4G075580 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33144	OS10G0409366 PROTEIN-RELATED	coord: 4..165
None	No IPR available	PANTHER	PTHR33144:SF22	PLANT TRANSPOSASE (PTTA/EN/SPM FAMILY)	coord: 4..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G075580.1	Chy4G075580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0016301	kinase activity