Chy4G075450 (gene) Cucumber (hystrix) v1

Overview


Name	Chy4G075450
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Ethylene-responsive transcription factor-like protein
Location	chrH04: 10772272 .. 10775390 (+)
RNA-Seq Expression	Chy4G075450
Synteny	Chy4G075450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAGCTTAAGAAGACGAAAACTCCTGGGACTTTACTCTGGTAAAGGTTACTTTTTAAAGCTATGGTATTGAGAAAACGGCTCATTTTGCTTAAGCTAATTAATGTGTTGAGAAGAACTGACTTTTTAAAAATTAAATATATACATATAGTTTTGCTCTTTTGATTCATGATTTTGAATGAAATTGACTCGGAGGAACTAACATTATGACTTACCCATGTGGGACTCATAGGCAAAGCGTCATTTGTTGCTCCAGTTTTGAAGTTTTCTGAAAATTTGACTGCTGAAGATCATGTGCACTGTACGAGCTTCGTTAGGGTTTATCCCATCTGTTCAGATAAAGTTAACAAGATAGAGGAGGTCAGTAGTTAAGATTTCCAATTTCTTTAATCACTACATAATTACATCATATTGTTAATAAAAGAACTGGCTACCGCCTACCTTGACCATTCCTCTTAGTACATAACTTCTCACTTCATAACCTTAATTCTTTCTATTTGTTTCATTGCTTAATTTGCTGTCATTTTTTGTACTTCACAATTCTTATCTGAGGCAAAATTATCTGTAAAATAAAAATGGACATGTTTTTTTAATAGCAATTACTATATTGGTGTTAGGTCAATGTACAAGATTGCACGAGTTTCCCTCTAATAATTTGACTCTCATGTTAAGAAAAGATTATTAGTTATTCCCATATTCTTCATGATAGCTAACTTACAAGTAATGCACCATATTACCATTTTTGATGAATAGGATATGTGTCCTCCTGTGTCCCAAAATAAACTTAGAATTATGGACATTTGATTATTGATTTAACGTTCAAATTTTGGTACATTTTGCAAAACTTGCATTTAATCTGCCTTAAGTTTGGCAGGGTGTTACTTATAGAGGGTTTTTTTGGGGGGTTAAAAAGGAATAGCTCTAATAAGAAATGTCATGAGATGATATGGCGGATTATAAAGTATTCGCACTTCTAGTAACCTTCATAATGGTTTTTCTTTATCAGAAACAACCATGTATATTTCATCAAAAACCAAAAGAACAACCTAAGGGCGAGGGGATCAAACGAAGAGCCTTCCAATTGTTAAAAGTTTAACTACAAAAGAATTTGGCATAATTTCAACATCACCAAGTAGATGTATCATGATGTTTAATAAAAGCCAAAAAGGAAAAAAAAATCAAAAGAAGTATACTTACAAGAGTTCTACCATTCCTTCTTTCCCAAGGCACCAAAAGAGAGACTGTGTAGTGCAACTCCAAAGAACTTACGCTTTACCACCGAAGGCAAAAGTATTAATCCCATCAAGCATCTTATTATATAGTCACGACGTAATCTACGTAATGCTAATCTGGATAAAATGGCTCATATTGCACCCTTAACATAACTCTTACCTTTTAATAAATGCTCATCATCTCAGTCAGTACTGGTTTAAGTTTGACACAGAACCTTATTCGCTGGAGGTCTTGCAATGTTCTTATGGGAATGCTATGCATGTTCTATAAGTAAAAGAAGATTAATTATCCTTTTTCTTCACTTTCCTTTTTTCTCCCAATGCAAAACTGGTTCGTCTTTTAGTACATAGCATGTCTGCTGATTGCTGGATGCTCATCTCGATAATATGACGTTTTTCAGAATCCAATTGCAAATATAGAGCCTGAATCATCAGGGGTATCTGTTTTGGATACATCAAAAGAGCAGATTGACACGACAAACGACGTGCCGATTGCAGGTTTGTTTGGCTTCAAATCATCCCTTCACATCCATAAGTTACATGAACAGATGTGATATTAGATTGGTAAGGATATAAGTCGACCATTTGATAGTGAGATTATTTGTATATTTTATGCTATTGATTCATCTTTGGGTGGGGAAGGGTGGGGTAGTTCGCATTGCATTTGCCTTGTAGATGGATAAACATCTGTCTTCTTAATGGGTCTGACATGAGCATAGCTTAAAAAATAAGTTATATCTACTTTCTTTTAATCTTGTAGGTTCGGATCAGTAATGGATTTGTAGAGAGGTCCATTGGCTGTTTTGCTTGTATGTGAAGTTGTCACTTTGTAAACGATATAGGTTTCCTTTTCAATGTTGCCTCCATTTCCAAAATACTATATAACCATCAGAGCTTTTCTAGTCCCAGTTGGAGTAATTTAGCAATTCTACTAACAGGAGAAAAATCTGATAACCCATTTCTTTTTTCTGTGGCCTTATATCTTGGGTGTACTGCTAGGAAGATATGATGATTTTTTTTTCCACAGAACTTTAAAGGGACATCTACTATTGTAACATTCAGAGATTAGAGATGATTCTTTTAATCTATATTTAGTCATAATATAATCATGATATATTATTATGACTCAAACTGCATGCTATTCTATCTGCAGACCCTCCTGTAAAGCGCAGAAAGAGACACCGGAGAAAGCATTTTCCTGACGAATCTTTCTTAATGAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATAAAGGTTGACAAAAAACAAATACACTTGGGAACTGTAGGATCACAAGAAGAGGCTGCTCATTTGTATGACAGGTAAAGTCTTGAAGTGACAAATTTTCAGCTGATTGATGAATGGGATTTTGTTCTTCAGATAAACAACAAAGGTCATCAAATGTGACCAATGTTTTAACCGGATAATATGCTATTCCATTTATACTTGAATGCAATATTTTAAGCATTTTTAAAAACGAGGGGAAAAAAAGAACAACCCGAATGAGCTGAACATCAGTCTTTTGCTATCCTAGAGCTGCTTTCATGTGTGGAAGGGAACCCAACTTTGAGCTCCCAGAAGAGGAGAAGCAAGAACTGAGAAAGTTTAATTGGGACGAATTTCTAGCAATGACTCGCGACAGGATTACTAATAGAAGTAAGTCTCTCTTCTATACAACTTGACAAATGCTGTTACGTCCCATTTAGATCGTATGAGTTATTTATCATCATTAGCTTCAGAACAGAAAAGGCTCAGCCACGAATCAAAGAAGTCTGAACTTTCTTCGCCTGGGAATGACGACTCTAACAAAAGACATGACAAGTTCATTGACCTCTCATCTCTAGAAGATGTGGAACCAGTTGCCTCTACATCTTGA

mRNA sequence

ATGGTGAGCTTAAGAAGACGAAAACTCCTGGGACTTTACTCTGGTAAAGGCAAAGCGTCATTTGTTGCTCCAGTTTTGAAGTTTTCTGAAAATTTGACTGCTGAAGATCATGTGCACTGTACGAGCTTCGTTAGGGTTTATCCCATCTGTTCAGATAAAGTTAACAAGATAGAGGAGAATCCAATTGCAAATATAGAGCCTGAATCATCAGGGGTATCTGTTTTGGATACATCAAAAGAGCAGATTGACACGACAAACGACGTGCCGATTGCAGACCCTCCTGTAAAGCGCAGAAAGAGACACCGGAGAAAGCATTTTCCTGACGAATCTTTCTTAATGAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATAAAGGTTGACAAAAAACAAATACACTTGGGAACTGTAGGATCACAAGAAGAGGCTGCTCATTTGTATGACAGAGCTGCTTTCATGTGTGGAAGGGAACCCAACTTTGAGCTCCCAGAAGAGGAGAAGCAAGAACTGAGAAAGTTTAATTGGGACGAATTTCTAGCAATGACTCGCGACAGGATTACTAATAGAACTTCAGAACAGAAAAGGCTCAGCCACGAATCAAAGAAGTCTGAACTTTCTTCGCCTGGGAATGACGACTCTAACAAAAGACATGACAAGTTCATTGACCTCTCATCTCTAGAAGATGTGGAACCAGTTGCCTCTACATCTTGA

Coding sequence (CDS)

ATGGTGAGCTTAAGAAGACGAAAACTCCTGGGACTTTACTCTGGTAAAGGCAAAGCGTCATTTGTTGCTCCAGTTTTGAAGTTTTCTGAAAATTTGACTGCTGAAGATCATGTGCACTGTACGAGCTTCGTTAGGGTTTATCCCATCTGTTCAGATAAAGTTAACAAGATAGAGGAGAATCCAATTGCAAATATAGAGCCTGAATCATCAGGGGTATCTGTTTTGGATACATCAAAAGAGCAGATTGACACGACAAACGACGTGCCGATTGCAGACCCTCCTGTAAAGCGCAGAAAGAGACACCGGAGAAAGCATTTTCCTGACGAATCTTTCTTAATGAGAGGTGTTTATTTCAAGAACATGAAATGGCAGGCTGCTATAAAGGTTGACAAAAAACAAATACACTTGGGAACTGTAGGATCACAAGAAGAGGCTGCTCATTTGTATGACAGAGCTGCTTTCATGTGTGGAAGGGAACCCAACTTTGAGCTCCCAGAAGAGGAGAAGCAAGAACTGAGAAAGTTTAATTGGGACGAATTTCTAGCAATGACTCGCGACAGGATTACTAATAGAACTTCAGAACAGAAAAGGCTCAGCCACGAATCAAAGAAGTCTGAACTTTCTTCGCCTGGGAATGACGACTCTAACAAAAGACATGACAAGTTCATTGACCTCTCATCTCTAGAAGATGTGGAACCAGTTGCCTCTACATCTTGA

Protein sequence

MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEENPIANIEPESSGVSVLDTSKEQIDTTNDVPIADPPVKRRKRHRRKHFPDESFLMRGVYFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKRHDKFIDLSSLEDVEPVASTS*

Homology

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BLAST of Chy4G075450 vs. ExPASy Swiss-Prot
Match: Q56XP9 (Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis thaliana OX=3702 GN=At4g13040 PE=2 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-35
Identity = 99/222 (44.59%), Postives = 126/222 (56.76%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRR+LLGL  G        P L   E +T   + +  +     P  +     +E+ 
Sbjct: 1   MVSLRRRRLLGLCCGPNGYVTPLPFLTAEEMITGIPNPNARAAYNPGPAETVTTVIVEKK 60

Query: 61  PIANIEPESSGVSV-LDTSKEQIDTTNDVPIAD--PPVKRRKRHRRKHFPD-ESFLMRGV 120
            I      +    +   +    I   N   I+    P KRRK+HRRK   + E  LMRGV
Sbjct: 61  AIEERSRRTRSKHMHFRSDYSDISPVNSDSISPKYQPPKRRKQHRRKRVHNQEPCLMRGV 120

Query: 121 YFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFN 180
           Y+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL EE  +EL++ +
Sbjct: 121 YYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSEEVIRELKQQS 180

Query: 181 WDEFLAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKR 219
           W+EFL  TR  ITN+   + R+ HE  K   S P   +  ++
Sbjct: 181 WEEFLNCTRRTITNK-KPKSRIEHEDTKINASMPHQPEEEEQ 221

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BLAST of Chy4G075450 vs. ExPASy TrEMBL
Match: A0A0A0LCE7 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G630280 PE=4 SV=1)

HSP 1 Score: 437.6 bits (1124), Expect = 3.4e-119
Identity = 226/238 (94.96%), Postives = 228/238 (95.80%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRRKLLGLYS  GKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN
Sbjct: 1   MVSLRRRKLLGLYS--GKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60

Query: 61  PIANIEPESSGVSVLDTSKEQIDTTNDVPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120
           P ANIEPESSGVSVLDTSKEQIDTTND PIADPPVKRRKRHRRKHFPDESFLMRGVYFKN
Sbjct: 61  PTANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120

Query: 121 MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180
           MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF
Sbjct: 121 MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180

Query: 181 LAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKRHDKFIDLSSLEDVEPVASTS 239
           LAMTR+ ITNR  +QKRLS ESKKSELSSPGNDDSNKRHDKFID S LEDVEPVASTS
Sbjct: 181 LAMTRNTITNR--KQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 234

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BLAST of Chy4G075450 vs. ExPASy TrEMBL
Match: A0A1S4E2T2 (ethylene-responsive transcription factor-like protein At4g13040 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103499216 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.6e-105
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRRKLLGLYS  GKASFVAPVLKFSENLTAE HVHCTS VRVYPICSD+VNKIEEN
Sbjct: 1   MVSLRRRKLLGLYS--GKASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEEN 60

Query: 61  PIANIEPESSGVSVLDTSKEQIDTTNDVPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120
           PIANIEPESSGVSVLDTSKEQIDTTN  PIADPPVKRRKRHRRKHFPDESFLMRGVYFKN
Sbjct: 61  PIANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120

Query: 121 MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180
           MKWQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF
Sbjct: 121 MKWQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180

Query: 181 LAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKR 219
           LAMTR+ ITNR  +QKRL+ ESKKSELSSPGNDDSNKR
Sbjct: 181 LAMTRNTITNR--KQKRLNPESKKSELSSPGNDDSNKR 214

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BLAST of Chy4G075450 vs. ExPASy TrEMBL
Match: A0A1S3CCB8 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499216 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.6e-105
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRRKLLGLYS  GKASFVAPVLKFSENLTAE HVHCTS VRVYPICSD+VNKIEEN
Sbjct: 28  MVSLRRRKLLGLYS--GKASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEEN 87

Query: 61  PIANIEPESSGVSVLDTSKEQIDTTNDVPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120
           PIANIEPESSGVSVLDTSKEQIDTTN  PIADPPVKRRKRHRRKHFPDESFLMRGVYFKN
Sbjct: 88  PIANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 147

Query: 121 MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180
           MKWQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF
Sbjct: 148 MKWQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 207

Query: 181 LAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKR 219
           LAMTR+ ITNR  +QKRL+ ESKKSELSSPGNDDSNKR
Sbjct: 208 LAMTRNTITNR--KQKRLNPESKKSELSSPGNDDSNKR 241

[Close]

BLAST of Chy4G075450 vs. ExPASy TrEMBL
Match: A0A5A7VNB7 (Ethylene-responsive transcription factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00250 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.6e-105
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRRKLLGLYS  GKASFVAPVLKFSENLTAE HVHCTS VRVYPICSD+VNKIEEN
Sbjct: 1   MVSLRRRKLLGLYS--GKASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEEN 60

Query: 61  PIANIEPESSGVSVLDTSKEQIDTTNDVPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120
           PIANIEPESSGVSVLDTSKEQIDTTN  PIADPPVKRRKRHRRKHFPDESFLMRGVYFKN
Sbjct: 61  PIANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120

Query: 121 MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180
           MKWQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF
Sbjct: 121 MKWQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180

Query: 181 LAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKR 219
           LAMTR+ ITNR  +QKRL+ ESKKSELSSPGNDDSNKR
Sbjct: 181 LAMTRNTITNR--KQKRLNPESKKSELSSPGNDDSNKR 214

[Close]

BLAST of Chy4G075450 vs. ExPASy TrEMBL
Match: A0A1S3CCT4 (ethylene-responsive transcription factor-like protein At4g13040 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499216 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.6e-105
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRRKLLGLYS  GKASFVAPVLKFSENLTAE HVHCTS VRVYPICSD+VNKIEEN
Sbjct: 28  MVSLRRRKLLGLYS--GKASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEEN 87

Query: 61  PIANIEPESSGVSVLDTSKEQIDTTNDVPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120
           PIANIEPESSGVSVLDTSKEQIDTTN  PIADPPVKRRKRHRRKHFPDESFLMRGVYFKN
Sbjct: 88  PIANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 147

Query: 121 MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180
           MKWQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF
Sbjct: 148 MKWQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 207

Query: 181 LAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKR 219
           LAMTR+ ITNR  +QKRL+ ESKKSELSSPGNDDSNKR
Sbjct: 208 LAMTRNTITNR--KQKRLNPESKKSELSSPGNDDSNKR 241

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BLAST of Chy4G075450 vs. NCBI nr
Match: XP_011651656.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis sativus])

HSP 1 Score: 436 bits (1122), Expect = 9.98e-154
Identity = 226/238 (94.96%), Postives = 228/238 (95.80%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRRKLLGLYSGK  ASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN
Sbjct: 1   MVSLRRRKLLGLYSGK--ASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60

Query: 61  PIANIEPESSGVSVLDTSKEQIDTTNDVPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120
           P ANIEPESSGVSVLDTSKEQIDTTND PIADPPVKRRKRHRRKHFPDESFLMRGVYFKN
Sbjct: 61  PTANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120

Query: 121 MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180
           MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF
Sbjct: 121 MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180

Query: 181 LAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKRHDKFIDLSSLEDVEPVASTS 238
           LAMTR+ ITNR  +QKRLS ESKKSELSSPGNDDSNKRHDKFID S LEDVEPVASTS
Sbjct: 181 LAMTRNTITNR--KQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 234

[Close]

BLAST of Chy4G075450 vs. NCBI nr
Match: XP_031738473.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Cucumis sativus])

HSP 1 Score: 417 bits (1073), Expect = 2.20e-146
Identity = 218/238 (91.60%), Postives = 220/238 (92.44%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRRKLLGLYS          VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN
Sbjct: 1   MVSLRRRKLLGLYS----------VLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60

Query: 61  PIANIEPESSGVSVLDTSKEQIDTTNDVPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120
           P ANIEPESSGVSVLDTSKEQIDTTND PIADPPVKRRKRHRRKHFPDESFLMRGVYFKN
Sbjct: 61  PTANIEPESSGVSVLDTSKEQIDTTNDEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120

Query: 121 MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180
           MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF
Sbjct: 121 MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180

Query: 181 LAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKRHDKFIDLSSLEDVEPVASTS 238
           LAMTR+ ITNR  +QKRLS ESKKSELSSPGNDDSNKRHDKFID S LEDVEPVASTS
Sbjct: 181 LAMTRNTITNR--KQKRLSPESKKSELSSPGNDDSNKRHDKFIDPSFLEDVEPVASTS 226

[Close]

BLAST of Chy4G075450 vs. NCBI nr
Match: XP_038887390.1 (ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Benincasa hispida] >XP_038887391.1 ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Benincasa hispida])

HSP 1 Score: 407 bits (1045), Expect = 6.03e-142
Identity = 213/241 (88.38%), Postives = 225/241 (93.36%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRRKLLGL +GKG  SFVAPVLKFSENLTAEDHVHCT+FV VYPICSD+VNKI+EN
Sbjct: 1   MVSLRRRKLLGLCTGKG--SFVAPVLKFSENLTAEDHVHCTNFVSVYPICSDQVNKIKEN 60

Query: 61  PIANIEPESSGVSVLDTSKEQIDTTNDVPIA-DPPVKRRKRHRRKHFPDESFLMRGVYFK 120
           PIANIEPESSGVSVLDTS+EQ DTTND PIA DPP+KRRKRHRRKHFPDESFLMRGVYFK
Sbjct: 61  PIANIEPESSGVSVLDTSREQNDTTNDEPIAADPPIKRRKRHRRKHFPDESFLMRGVYFK 120

Query: 121 NMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDE 180
           NMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEK+ELRKFNWDE
Sbjct: 121 NMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKKELRKFNWDE 180

Query: 181 FLAMTRDRITNRTSEQKRLSHESKKSELSSPGNDD--SNKRHDKFIDLSSLEDVEPVAST 238
           FLAMTR  ITNR  +QKRLS ES KS+LSSPGNDD  SNKRHD+FID S+LED+EPVAST
Sbjct: 181 FLAMTRHAITNR--KQKRLSPESNKSKLSSPGNDDDDSNKRHDEFIDPSALEDMEPVAST 237

[Close]

BLAST of Chy4G075450 vs. NCBI nr
Match: XP_008460380.1 (PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X6 [Cucumis melo] >XP_008460381.1 PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X6 [Cucumis melo] >XP_016902532.1 PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X6 [Cucumis melo] >KAA0068076.1 ethylene-responsive transcription factor-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 390 bits (1001), Expect = 1.85e-135
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRRKLLGLYSGK  ASFVAPVLKFSENLTAE HVHCTS VRVYPICSD+VNKIEEN
Sbjct: 1   MVSLRRRKLLGLYSGK--ASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEEN 60

Query: 61  PIANIEPESSGVSVLDTSKEQIDTTNDVPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120
           PIANIEPESSGVSVLDTSKEQIDTTN  PIADPPVKRRKRHRRKHFPDESFLMRGVYFKN
Sbjct: 61  PIANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120

Query: 121 MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180
           MKWQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF
Sbjct: 121 MKWQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180

Query: 181 LAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKR 218
           LAMTR+ ITNR  +QKRL+ ESKKSELSSPGNDDSNKR
Sbjct: 181 LAMTRNTITNR--KQKRLNPESKKSELSSPGNDDSNKR 214

[Close]

BLAST of Chy4G075450 vs. NCBI nr
Match: XP_008460375.1 (PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis melo] >XP_016902531.1 PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucumis melo])

HSP 1 Score: 390 bits (1001), Expect = 4.84e-135
Identity = 203/218 (93.12%), Postives = 207/218 (94.95%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRRKLLGLYSGK  ASFVAPVLKFSENLTAE HVHCTS VRVYPICSD+VNKIEEN
Sbjct: 28  MVSLRRRKLLGLYSGK--ASFVAPVLKFSENLTAEVHVHCTSSVRVYPICSDEVNKIEEN 87

Query: 61  PIANIEPESSGVSVLDTSKEQIDTTNDVPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 120
           PIANIEPESSGVSVLDTSKEQIDTTN  PIADPPVKRRKRHRRKHFPDESFLMRGVYFKN
Sbjct: 88  PIANIEPESSGVSVLDTSKEQIDTTNGEPIADPPVKRRKRHRRKHFPDESFLMRGVYFKN 147

Query: 121 MKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 180
           MKWQAAIKVDKKQIHLGTV SQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF
Sbjct: 148 MKWQAAIKVDKKQIHLGTVASQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEF 207

Query: 181 LAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKR 218
           LAMTR+ ITNR  +QKRL+ ESKKSELSSPGNDDSNKR
Sbjct: 208 LAMTRNTITNR--KQKRLNPESKKSELSSPGNDDSNKR 241

[Close]

BLAST of Chy4G075450 vs. TAIR 10
Match: AT4G13040.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 7.2e-37
Identity = 99/222 (44.59%), Postives = 126/222 (56.76%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRR+LLGL  G        P L   E +T   + +  +     P  +     +E+ 
Sbjct: 1   MVSLRRRRLLGLCCGPNGYVTPLPFLTAEEMITGIPNPNARAAYNPGPAETVTTVIVEKK 60

Query: 61  PIANIEPESSGVSV-LDTSKEQIDTTNDVPIAD--PPVKRRKRHRRKHFPD-ESFLMRGV 120
            I      +    +   +    I   N   I+    P KRRK+HRRK   + E  LMRGV
Sbjct: 61  AIEERSRRTRSKHMHFRSDYSDISPVNSDSISPKYQPPKRRKQHRRKRVHNQEPCLMRGV 120

Query: 121 YFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFN 180
           Y+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL EE  +EL++ +
Sbjct: 121 YYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSEEVIRELKQQS 180

Query: 181 WDEFLAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKR 219
           W+EFL  TR  ITN+   + R+ HE  K   S P   +  ++
Sbjct: 181 WEEFLNCTRRTITNK-KPKSRIEHEDTKINASMPHQPEEEEQ 221

[Close]

BLAST of Chy4G075450 vs. TAIR 10
Match: AT4G13040.3 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 7.2e-37
Identity = 99/222 (44.59%), Postives = 126/222 (56.76%), Query Frame = 0


Query: 1   MVSLRRRKLLGLYSGKGKASFVAPVLKFSENLTAEDHVHCTSFVRVYPICSDKVNKIEEN 60
           MVSLRRR+LLGL  G        P L   E +T   + +  +     P  +     +E+ 
Sbjct: 21  MVSLRRRRLLGLCCGPNGYVTPLPFLTAEEMITGIPNPNARAAYNPGPAETVTTVIVEKK 80

Query: 61  PIANIEPESSGVSV-LDTSKEQIDTTNDVPIAD--PPVKRRKRHRRKHFPD-ESFLMRGV 120
            I      +    +   +    I   N   I+    P KRRK+HRRK   + E  LMRGV
Sbjct: 81  AIEERSRRTRSKHMHFRSDYSDISPVNSDSISPKYQPPKRRKQHRRKRVHNQEPCLMRGV 140

Query: 121 YFKNMKWQAAIKVDKKQIHLGTVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFN 180
           Y+KNMKWQAAIKV+KKQIHLGT  SQEEAA LYDRAAFMCGREPNFEL EE  +EL++ +
Sbjct: 141 YYKNMKWQAAIKVEKKQIHLGTFSSQEEAARLYDRAAFMCGREPNFELSEEVIRELKQQS 200

Query: 181 WDEFLAMTRDRITNRTSEQKRLSHESKKSELSSPGNDDSNKR 219
           W+EFL  TR  ITN+   + R+ HE  K   S P   +  ++
Sbjct: 201 WEEFLNCTRRTITNK-KPKSRIEHEDTKINASMPHQPEEEEQ 241

[Close]

BLAST of Chy4G075450 vs. TAIR 10
Match: AT4G13040.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 148.7 bits (374), Expect = 6.1e-36
Identity = 81/141 (57.45%), Postives = 100/141 (70.92%), Query Frame = 0


Query: 79  KEQIDTTNDVPIADPPVKRRKRHRRKHFPD-ESFLMRGVYFKNMKWQAAIKVDKKQIHLG 138
           KE  +   ++ I+D P KRRK+HRRK   + E  LMRGVY+KNMKWQAAIKV+KKQIHLG
Sbjct: 26  KEAEELGQNICISDQPPKRRKQHRRKRVHNQEPCLMRGVYYKNMKWQAAIKVEKKQIHLG 85

Query: 139 TVGSQEEAAHLYDRAAFMCGREPNFELPEEEKQELRKFNWDEFLAMTRDRITNRTSEQKR 198
           T  SQEEAA LYDRAAFMCGREPNFEL EE  +EL++ +W+EFL  TR  ITN+   + R
Sbjct: 86  TFSSQEEAARLYDRAAFMCGREPNFELSEEVIRELKQQSWEEFLNCTRRTITNK-KPKSR 145

Query: 199 LSHESKKSELSSPGNDDSNKR 219
           + HE  K   S P   +  ++
Sbjct: 146 IEHEDTKINASMPHQPEEEEQ 165

The following BLAST results are available for this feature:

BLAST of Chy4G075450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XP9	1.0e-35	44.59	Ethylene-responsive transcription factor-like protein At4g13040 OS=Arabidopsis t...	[more]

BLAST of Chy4G075450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCE7	3.4e-119	94.96	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G630280 PE=...	[more]
A0A1S4E2T2	1.6e-105	93.12	ethylene-responsive transcription factor-like protein At4g13040 isoform X6 OS=Cu...	[more]
A0A1S3CCB8	1.6e-105	93.12	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 OS=Cu...	[more]
A0A5A7VNB7	1.6e-105	93.12	Ethylene-responsive transcription factor-like protein OS=Cucumis melo var. makuw...	[more]
A0A1S3CCT4	1.6e-105	93.12	ethylene-responsive transcription factor-like protein At4g13040 isoform X2 OS=Cu...	[more]

BLAST of Chy4G075450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651656.1	9.98e-154	94.96	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Cucu...	[more]
XP_031738473.1	2.20e-146	91.60	ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Cucu...	[more]
XP_038887390.1	6.03e-142	88.38	ethylene-responsive transcription factor-like protein At4g13040 isoform X1 [Beni...	[more]
XP_008460380.1	1.85e-135	93.12	PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isofo...	[more]
XP_008460375.1	4.84e-135	93.12	PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isofo...	[more]

BLAST of Chy4G075450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13040.1	7.2e-37	44.59	Integrase-type DNA-binding superfamily protein	[more]
AT4G13040.3	7.2e-37	44.59	Integrase-type DNA-binding superfamily protein	[more]
AT4G13040.2	6.1e-36	57.45	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 112..171 e-value: 4.8E-4 score: 21.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 114..155 e-value: 7.0E-5 score: 23.0
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 114..164 e-value: 6.0E-8 score: 34.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..227
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..238
None	No IPR available	PANTHER	PTHR32467	AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR	coord: 1..227
None	No IPR available	PANTHER	PTHR32467:SF4	OS02G0499000 PROTEIN	coord: 1..227
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 113..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy4G075450.1	Chy4G075450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity